sbuild (Debian sbuild) 0.85.10 (30 May 2024) on carme.larted.org.uk

+==============================================================================+
| trinityrnaseq 2.15.1+dfsg-5 (amd64)          Mon, 05 Aug 2024 23:47:23 +0000 |
+==============================================================================+

Package: trinityrnaseq
Version: 2.15.1+dfsg-5
Source Version: 2.15.1+dfsg-5
Distribution: sid
Machine Architecture: amd64
Host Architecture: amd64
Build Architecture: amd64
Build Type: full

I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-debomatic-2e1441b4-e933-41d4-a73d-82c9409ca37f' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Chroot Setup Commands                                                        |
+------------------------------------------------------------------------------+


/usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup trinityrnaseq_2.15.1+dfsg-5 sid amd64
------------------------------------------------------------------------------------------------------------


I: Finished running '/usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup trinityrnaseq_2.15.1+dfsg-5 sid amd64'.

Finished processing commands.
--------------------------------------------------------------------------------
I: NOTICE: Log filtering will replace 'build/trinityrnaseq-lk0koF/resolver-noCpvU' with '<<RESOLVERDIR>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Hit:1 http://deb.debian.org/debian unstable InRelease
Hit:2 http://deb.debian.org/debian sid InRelease
Reading package lists...
Reading package lists...
Building dependency tree...
Reading state information...
Calculating upgrade...
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Local sources
-------------

/srv/debomatic/incoming/trinityrnaseq_2.15.1+dfsg-5.dsc exists in /srv/debomatic/incoming; copying to chroot
I: NOTICE: Log filtering will replace 'build/trinityrnaseq-lk0koF/trinityrnaseq-2.15.1+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/trinityrnaseq-lk0koF' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), libjung-free-java (>= 2.1.1), javahelper, libgetopt-java, default-jdk, libjs-jquery, jaligner, libhts-dev, zlib1g-dev, cmake, build-essential, fakeroot
Filtered Build-Depends: debhelper-compat (= 13), libjung-free-java (>= 2.1.1), javahelper, libgetopt-java, default-jdk, libjs-jquery, jaligner, libhts-dev, zlib1g-dev, cmake, build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [609 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [743 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [775 B]
Fetched 2127 B in 0s (0 B/s)
Reading package lists...
Reading package lists...

Install main build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  adwaita-icon-theme at-spi2-common autoconf automake autopoint autotools-dev
  binfmt-support bsdextrautils ca-certificates ca-certificates-java cmake
  cmake-data dbus dbus-bin dbus-daemon dbus-session-bus-common
  dbus-system-bus-common dbus-user-session dconf-gsettings-backend
  dconf-service dctrl-tools debhelper default-jdk default-jdk-headless
  default-jre default-jre-headless devscripts dh-autoreconf
  dh-strip-nondeterminism dwz fakeroot fastjar file fontconfig
  fontconfig-config fonts-dejavu-core fonts-dejavu-mono gettext gettext-base
  groff-base gtk-update-icon-cache hicolor-icon-theme intltool-debian jaligner
  jarwrapper java-common javahelper libapparmor1 libarchive-zip-perl
  libarchive13t64 libasound2-data libasound2t64 libatinject-jsr330-api-java
  libatk-bridge2.0-0t64 libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3
  libavahi-common-data libavahi-common3 libb-hooks-op-check-perl libbrotli-dev
  libbrotli1 libcairo-gobject2 libcairo2 libclass-method-modifiers-perl
  libclass-xsaccessor-perl libclone-perl libcloudproviders0 libcolord2
  libcom-err2 libcups2t64 libcurl3t64-gnutls libcurl4-gnutls-dev libcurl4t64
  libdatrie1 libdbus-1-3 libdconf1 libdebhelper-perl libdeflate-dev
  libdeflate0 libdevel-callchecker-perl libdrm-amdgpu1 libdrm-common
  libdrm-intel1 libdrm-radeon1 libdrm2 libdynaloader-functions-perl libedit2
  libelf1t64 libencode-locale-perl libepoxy0 liberror-prone-java
  libevent-2.1-7t64 libexpat1 libfakeroot libfile-dirlist-perl
  libfile-homedir-perl libfile-listing-perl libfile-stripnondeterminism-perl
  libfile-touch-perl libfile-which-perl libfontconfig1 libfreetype6
  libfribidi0 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgetopt-java
  libgif7 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0t64 libglvnd0
  libglx-mesa0 libglx0 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64
  libgnutls-openssl27t64 libgnutls28-dev libgraphite2-3 libgssapi-krb5-2
  libgtk-3-0t64 libgtk-3-common libguava-java libharfbuzz0b
  libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhts-dev
  libhts3t64 libhtscodecs2 libhttp-cookies-perl libhttp-date-perl
  libhttp-message-perl libhttp-negotiate-perl libicu72 libidn2-dev
  libimport-into-perl libio-html-perl libio-pty-perl libio-socket-ssl-perl
  libipc-run-perl libjbig0 libjpeg62-turbo libjs-jquery libjsoncpp25
  libjsr305-java libjung-free-java libk5crypto3 libkeyutils1 libkrb5-3
  libkrb5support0 liblcms2-2 liblerc4 libllvm17t64 liblwp-mediatypes-perl
  liblwp-protocol-https-perl liblzma-dev libmagic-mgc libmagic1t64
  libmodule-runtime-perl libmoo-perl libnet-http-perl libnet-ssleay-perl
  libnghttp2-14 libnghttp2-dev libnghttp3-9 libnghttp3-dev libngtcp2-16
  libngtcp2-crypto-gnutls-dev libngtcp2-crypto-gnutls8 libngtcp2-dev libnspr4
  libnss3 libp11-kit-dev libpam-systemd libpango-1.0-0 libpangocairo-1.0-0
  libpangoft2-1.0-0 libparams-classify-perl libpciaccess0 libpcsclite1
  libpipeline1 libpixman-1-0 libpkgconf3 libpng16-16t64 libproc2-0 libpsl-dev
  libpsl5t64 libpython3-stdlib libpython3.12-minimal libpython3.12-stdlib
  librhash0 librole-tiny-perl librtmp-dev librtmp1 libsensors-config
  libsensors5 libsharpyuv0 libssh2-1-dev libssh2-1t64 libssl-dev
  libsub-quote-perl libsystemd-shared libtasn1-6-dev libthai-data libthai0
  libtiff6 libtimedate-perl libtool libtry-tiny-perl libuchardet0 libunbound8
  liburi-perl libuv1t64 libvulkan1 libwayland-client0 libwayland-cursor0
  libwayland-egl1 libwebp7 libwww-perl libwww-robotrules-perl libx11-6
  libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0
  libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1
  libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6
  libxext6 libxfixes3 libxi6 libxinerama1 libxkbcommon0 libxml2 libxrandr2
  libxrender1 libxshmfence1 libxtst6 libxxf86vm1 libz3-4 libzstd-dev m4 man-db
  media-types mount netbase nettle-dev openjdk-21-jdk openjdk-21-jdk-headless
  openjdk-21-jre openjdk-21-jre-headless openssl patchutils
  perl-openssl-defaults pkgconf pkgconf-bin po-debconf procps python3
  python3-minimal python3.12 python3.12-minimal sensible-utils
  shared-mime-info systemd systemd-sysv tzdata wdiff x11-common xkb-data
  zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc cmake-doc cmake-format
  elpa-cmake-mode ninja-build debtags dh-make adequate at autopkgtest
  bls-standalone bsd-mailx | mailx check-all-the-things cvs-buildpackage
  diffoscope disorderfs dose-extra duck elpa-devscripts faketime gnuplot
  how-can-i-help libauthen-sasl-perl libdbd-pg-perl libfile-desktopentry-perl
  libterm-size-perl libyaml-syck-perl mmdebstrap mutt piuparts
  postgresql-client pristine-lfs quilt ratt reprotest ssh-client
  svn-buildpackage w3m gettext-doc libasprintf-dev libgettextpo-dev groff
  lrzip alsa-utils libasound2-plugins libatinject-jsr330-api-java-doc colord
  cups-common libcurl4-doc libidn-dev libkrb5-dev libldap2-dev
  low-memory-monitor gmp-doc libgmp10-doc libmpfr-dev dns-root-data gnutls-bin
  gnutls-doc krb5-doc krb5-user gvfs libdata-dump-perl libjsr305-java-doc
  liblcms2-utils libcrypt-ssleay-perl liblzma-doc libnghttp2-doc p11-kit-doc
  libcryptsetup12 libtss2-rc0t64 libscalar-number-perl pciutils pcscd
  lm-sensors libssl-doc libbpf1 libdw1t64 libfido2-1 libip4tc2 libpwquality1
  libqrencode4 libtool-doc gfortran | fortran95-compiler gcj-jdk
  libsub-name-perl libbusiness-isbn-perl libregexp-ipv6-perl
  libauthen-ntlm-perl m4-doc apparmor less www-browser nfs-common
  openjdk-21-demo openjdk-21-source visualvm libnss-mdns fonts-dejavu-extra
  fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei
  | fonts-wqy-zenhei fonts-indic libmail-box-perl python3-doc python3-tk
  python3-venv python3.12-venv python3.12-doc systemd-container systemd-homed
  systemd-userdbd systemd-boot systemd-resolved systemd-repart
  libtss2-tcti-device0 polkitd wdiff-doc
Recommended packages:
  librsvg2-common dput | dupload libdistro-info-perl libgit-wrapper-perl
  libjson-perl liblist-compare-perl libstring-shellquote-perl licensecheck
  lintian python3-apt python3-debian python3-magic python3-requests
  python3-unidiff python3-xdg strace unzip wget | curl debian-keyring equivs
  libgitlab-api-v4-perl libsoap-lite-perl pristine-tar curl | wget | lynx
  alsa-ucm-conf alsa-topology-conf at-spi2-core libarchive-cpio-perl
  libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs libgtk-3-bin
  libhtml-format-perl libio-compress-brotli-perl javascript-common
  krb5-locales libnamespace-clean-perl publicsuffix libxstring-perl libkmod2
  libtasn1-doc libltdl-dev mesa-vulkan-drivers | vulkan-icd libdata-dump-perl
  libhtml-form-perl libhttp-daemon-perl libmailtools-perl libxt-dev
  libatk-wrapper-java-jni fonts-dejavu-extra libmail-sendmail-perl psmisc
  linux-sysctl-defaults systemd-timesyncd | time-daemon systemd-cryptsetup
  libnss-systemd
The following NEW packages will be installed:
  adwaita-icon-theme at-spi2-common autoconf automake autopoint autotools-dev
  binfmt-support bsdextrautils ca-certificates ca-certificates-java cmake
  cmake-data dbus dbus-bin dbus-daemon dbus-session-bus-common
  dbus-system-bus-common dbus-user-session dconf-gsettings-backend
  dconf-service dctrl-tools debhelper default-jdk default-jdk-headless
  default-jre default-jre-headless devscripts dh-autoreconf
  dh-strip-nondeterminism dwz fakeroot fastjar file fontconfig
  fontconfig-config fonts-dejavu-core fonts-dejavu-mono gettext gettext-base
  groff-base gtk-update-icon-cache hicolor-icon-theme intltool-debian jaligner
  jarwrapper java-common javahelper libapparmor1 libarchive-zip-perl
  libarchive13t64 libasound2-data libasound2t64 libatinject-jsr330-api-java
  libatk-bridge2.0-0t64 libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3
  libavahi-common-data libavahi-common3 libb-hooks-op-check-perl libbrotli-dev
  libbrotli1 libcairo-gobject2 libcairo2 libclass-method-modifiers-perl
  libclass-xsaccessor-perl libclone-perl libcloudproviders0 libcolord2
  libcom-err2 libcups2t64 libcurl3t64-gnutls libcurl4-gnutls-dev libcurl4t64
  libdatrie1 libdbus-1-3 libdconf1 libdebhelper-perl libdeflate-dev
  libdeflate0 libdevel-callchecker-perl libdrm-amdgpu1 libdrm-common
  libdrm-intel1 libdrm-radeon1 libdrm2 libdynaloader-functions-perl libedit2
  libelf1t64 libencode-locale-perl libepoxy0 liberror-prone-java
  libevent-2.1-7t64 libexpat1 libfakeroot libfile-dirlist-perl
  libfile-homedir-perl libfile-listing-perl libfile-stripnondeterminism-perl
  libfile-touch-perl libfile-which-perl libfontconfig1 libfreetype6
  libfribidi0 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgetopt-java
  libgif7 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0t64 libglvnd0
  libglx-mesa0 libglx0 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64
  libgnutls-openssl27t64 libgnutls28-dev libgraphite2-3 libgssapi-krb5-2
  libgtk-3-0t64 libgtk-3-common libguava-java libharfbuzz0b
  libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhts-dev
  libhts3t64 libhtscodecs2 libhttp-cookies-perl libhttp-date-perl
  libhttp-message-perl libhttp-negotiate-perl libicu72 libidn2-dev
  libimport-into-perl libio-html-perl libio-pty-perl libio-socket-ssl-perl
  libipc-run-perl libjbig0 libjpeg62-turbo libjs-jquery libjsoncpp25
  libjsr305-java libjung-free-java libk5crypto3 libkeyutils1 libkrb5-3
  libkrb5support0 liblcms2-2 liblerc4 libllvm17t64 liblwp-mediatypes-perl
  liblwp-protocol-https-perl liblzma-dev libmagic-mgc libmagic1t64
  libmodule-runtime-perl libmoo-perl libnet-http-perl libnet-ssleay-perl
  libnghttp2-14 libnghttp2-dev libnghttp3-9 libnghttp3-dev libngtcp2-16
  libngtcp2-crypto-gnutls-dev libngtcp2-crypto-gnutls8 libngtcp2-dev libnspr4
  libnss3 libp11-kit-dev libpam-systemd libpango-1.0-0 libpangocairo-1.0-0
  libpangoft2-1.0-0 libparams-classify-perl libpciaccess0 libpcsclite1
  libpipeline1 libpixman-1-0 libpkgconf3 libpng16-16t64 libproc2-0 libpsl-dev
  libpsl5t64 libpython3-stdlib libpython3.12-minimal libpython3.12-stdlib
  librhash0 librole-tiny-perl librtmp-dev librtmp1 libsensors-config
  libsensors5 libsharpyuv0 libssh2-1-dev libssh2-1t64 libssl-dev
  libsub-quote-perl libsystemd-shared libtasn1-6-dev libthai-data libthai0
  libtiff6 libtimedate-perl libtool libtry-tiny-perl libuchardet0 libunbound8
  liburi-perl libuv1t64 libvulkan1 libwayland-client0 libwayland-cursor0
  libwayland-egl1 libwebp7 libwww-perl libwww-robotrules-perl libx11-6
  libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0
  libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1
  libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6
  libxext6 libxfixes3 libxi6 libxinerama1 libxkbcommon0 libxml2 libxrandr2
  libxrender1 libxshmfence1 libxtst6 libxxf86vm1 libz3-4 libzstd-dev m4 man-db
  media-types mount netbase nettle-dev openjdk-21-jdk openjdk-21-jdk-headless
  openjdk-21-jre openjdk-21-jre-headless openssl patchutils
  perl-openssl-defaults pkgconf pkgconf-bin po-debconf procps python3
  python3-minimal python3.12 python3.12-minimal
  sbuild-build-depends-main-dummy sensible-utils shared-mime-info systemd
  systemd-sysv tzdata wdiff x11-common xkb-data zlib1g-dev
0 upgraded, 285 newly installed, 0 to remove and 0 not upgraded.
Need to get 270 MB of archives.
After this operation, 856 MB of additional disk space will be used.
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Get:2 http://deb.debian.org/debian unstable/main amd64 mount amd64 2.40.2-4 [154 kB]
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Get:4 http://deb.debian.org/debian unstable/main amd64 libsystemd-shared amd64 256.4-2 [2058 kB]
Get:5 http://deb.debian.org/debian unstable/main amd64 systemd amd64 256.4-2 [3486 kB]
Get:6 http://deb.debian.org/debian unstable/main amd64 systemd-sysv amd64 256.4-2 [57.2 kB]
Get:7 http://deb.debian.org/debian unstable/main amd64 libdbus-1-3 amd64 1.14.10-4+b1 [203 kB]
Get:8 http://deb.debian.org/debian unstable/main amd64 dbus-bin amd64 1.14.10-4+b1 [106 kB]
Get:9 http://deb.debian.org/debian unstable/main amd64 dbus-session-bus-common all 1.14.10-4 [79.0 kB]
Get:10 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.2-1 [103 kB]
Get:11 http://deb.debian.org/debian unstable/main amd64 dbus-daemon amd64 1.14.10-4+b1 [185 kB]
Get:12 http://deb.debian.org/debian unstable/main amd64 dbus-system-bus-common all 1.14.10-4 [80.1 kB]
Get:13 http://deb.debian.org/debian unstable/main amd64 dbus amd64 1.14.10-4+b1 [98.6 kB]
Get:14 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB]
Get:15 http://deb.debian.org/debian unstable/main amd64 binfmt-support amd64 2.2.2-7 [64.3 kB]
Get:16 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.4-3 [812 kB]
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Get:59 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.71-3 [332 kB]
Get:60 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB]
Get:61 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB]
Get:62 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB]
Get:63 http://deb.debian.org/debian unstable/main amd64 ca-certificates-java all 20240118 [11.6 kB]
Get:64 http://deb.debian.org/debian unstable/main amd64 libarchive13t64 amd64 3.7.2-2.1 [346 kB]
Get:65 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b4 [300 kB]
Get:66 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB]
Get:67 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1 [22.9 kB]
Get:68 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB]
Get:69 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B]
Get:70 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB]
Get:71 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB]
Get:72 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.62.1-2 [74.9 kB]
Get:73 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB]
Get:74 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB]
Get:75 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.0-7 [216 kB]
Get:76 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.9.1-1 [463 kB]
Get:77 http://deb.debian.org/debian unstable/main amd64 libjsoncpp25 amd64 1.9.5-6+b2 [81.9 kB]
Get:78 http://deb.debian.org/debian unstable/main amd64 librhash0 amd64 1.4.3-3+b1 [132 kB]
Get:79 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.48.0-5 [148 kB]
Get:80 http://deb.debian.org/debian unstable/main amd64 cmake-data all 3.30.2-1 [2268 kB]
Get:81 http://deb.debian.org/debian unstable/main amd64 cmake amd64 3.30.2-1 [11.4 MB]
Get:82 http://deb.debian.org/debian unstable/main amd64 dbus-user-session amd64 1.14.10-4+b1 [79.1 kB]
Get:83 http://deb.debian.org/debian unstable/main amd64 libdconf1 amd64 0.40.0-4+b2 [41.9 kB]
Get:84 http://deb.debian.org/debian unstable/main amd64 dconf-service amd64 0.40.0-4+b2 [32.4 kB]
Get:85 http://deb.debian.org/debian unstable/main amd64 dconf-gsettings-backend amd64 0.40.0-4+b2 [28.7 kB]
Get:86 http://deb.debian.org/debian unstable/main amd64 dctrl-tools amd64 2.24-3+b1 [104 kB]
Get:87 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.16 [88.6 kB]
Get:88 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-7 [517 kB]
Get:89 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB]
Get:90 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB]
Get:91 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get:92 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get:93 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.191-2 [188 kB]
Get:94 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB]
Get:95 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB]
Get:96 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:97 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB]
Get:98 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.16 [891 kB]
Get:99 http://deb.debian.org/debian unstable/main amd64 java-common all 0.76 [6776 B]
Get:100 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.14-2+b1 [154 kB]
Get:101 http://deb.debian.org/debian unstable/main amd64 libnspr4 amd64 2:4.35-1.1+b1 [109 kB]
Get:102 http://deb.debian.org/debian unstable/main amd64 libnss3 amd64 2:3.102-1 [1336 kB]
Get:103 http://deb.debian.org/debian unstable/main amd64 libpcsclite1 amd64 2.3.0-1 [55.4 kB]
Get:104 http://deb.debian.org/debian unstable/main amd64 openjdk-21-jre-headless amd64 21.0.4+7-2 [42.0 MB]
Get:105 http://deb.debian.org/debian unstable/main amd64 default-jre-headless amd64 2:1.21-76 [3192 B]
Get:106 http://deb.debian.org/debian unstable/main amd64 libatk1.0-0t64 amd64 2.52.0-1 [50.8 kB]
Get:107 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.9-1+b1 [18.1 kB]
Get:108 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3+b1 [24.3 kB]
Get:109 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2 [144 kB]
Get:110 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.7-1 [328 kB]
Get:111 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.7-1+b1 [799 kB]
Get:112 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB]
Get:113 http://deb.debian.org/debian unstable/main amd64 libxi6 amd64 2:1.8.1-1 [79.0 kB]
Get:114 http://deb.debian.org/debian unstable/main amd64 libatspi2.0-0t64 amd64 2.52.0-1 [75.9 kB]
Get:115 http://deb.debian.org/debian unstable/main amd64 libatk-bridge2.0-0t64 amd64 2.52.0-1 [67.0 kB]
Get:116 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.2+dfsg-1+b4 [439 kB]
Get:117 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB]
Get:118 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB]
Get:119 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-1.1 [317 kB]
Get:120 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-1.1 [388 kB]
Get:121 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.42.2-1+b1 [556 kB]
Get:122 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2 [115 kB]
Get:123 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2 [105 kB]
Get:124 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b1 [27.9 kB]
Get:125 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.0-3+b1 [531 kB]
Get:126 http://deb.debian.org/debian unstable/main amd64 libcairo-gobject2 amd64 1.18.0-3+b1 [129 kB]
Get:127 http://deb.debian.org/debian unstable/main amd64 libcloudproviders0 amd64 0.3.6-1 [28.9 kB]
Get:128 http://deb.debian.org/debian unstable/main amd64 libcolord2 amd64 1.4.7-1+b1 [139 kB]
Get:129 http://deb.debian.org/debian unstable/main amd64 libavahi-common-data amd64 0.8-13+b2 [112 kB]
Get:130 http://deb.debian.org/debian unstable/main amd64 libavahi-common3 amd64 0.8-13+b2 [43.3 kB]
Get:131 http://deb.debian.org/debian unstable/main amd64 libavahi-client3 amd64 0.8-13+b2 [47.0 kB]
Get:132 http://deb.debian.org/debian unstable/main amd64 libcups2t64 amd64 2.4.10-1 [249 kB]
Get:133 http://deb.debian.org/debian unstable/main amd64 libepoxy0 amd64 1.5.10-1+b2 [191 kB]
Get:134 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.15-1 [71.8 kB]
Get:135 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2 [74.9 kB]
Get:136 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 8.3.0-2+b1 [2214 kB]
Get:137 http://deb.debian.org/debian unstable/main amd64 fontconfig amd64 2.15.0-1.1 [463 kB]
Get:138 http://deb.debian.org/debian unstable/main amd64 libthai-data all 0.1.29-2 [168 kB]
Get:139 http://deb.debian.org/debian unstable/main amd64 libdatrie1 amd64 0.2.13-3 [37.7 kB]
Get:140 http://deb.debian.org/debian unstable/main amd64 libthai0 amd64 0.1.29-2 [49.1 kB]
Get:141 http://deb.debian.org/debian unstable/main amd64 libpango-1.0-0 amd64 1.54.0+ds-1 [219 kB]
Get:142 http://deb.debian.org/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-1 [48.0 kB]
Get:143 http://deb.debian.org/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-1 [35.0 kB]
Get:144 http://deb.debian.org/debian unstable/main amd64 libwayland-client0 amd64 1.23.0-1 [26.4 kB]
Get:145 http://deb.debian.org/debian unstable/main amd64 libwayland-cursor0 amd64 1.23.0-1 [11.3 kB]
Get:146 http://deb.debian.org/debian unstable/main amd64 libwayland-egl1 amd64 1.23.0-1 [5392 B]
Get:147 http://deb.debian.org/debian unstable/main amd64 libxcomposite1 amd64 1:0.4.5-1+b1 [14.9 kB]
Get:148 http://deb.debian.org/debian unstable/main amd64 libxfixes3 amd64 1:6.0.0-2+b1 [20.3 kB]
Get:149 http://deb.debian.org/debian unstable/main amd64 libxcursor1 amd64 1:1.2.2-1 [37.1 kB]
Get:150 http://deb.debian.org/debian unstable/main amd64 libxdamage1 amd64 1:1.1.6-1+b1 [15.5 kB]
Get:151 http://deb.debian.org/debian unstable/main amd64 libxinerama1 amd64 2:1.1.4-3+b1 [16.0 kB]
Get:152 http://deb.debian.org/debian unstable/main amd64 xkb-data all 2.42-1 [790 kB]
Get:153 http://deb.debian.org/debian unstable/main amd64 libxkbcommon0 amd64 1.6.0-1+b1 [109 kB]
Get:154 http://deb.debian.org/debian unstable/main amd64 libxrandr2 amd64 2:1.5.4-1 [36.1 kB]
Get:155 http://deb.debian.org/debian unstable/main amd64 libgtk-3-common all 3.24.43-1 [4657 kB]
Get:156 http://deb.debian.org/debian unstable/main amd64 libgtk-3-0t64 amd64 3.24.43-1 [2728 kB]
Get:157 http://deb.debian.org/debian unstable/main amd64 libglvnd0 amd64 1.7.0-1+b1 [56.3 kB]
Get:158 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.122-1 [7992 B]
Get:159 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.122-1 [38.7 kB]
Get:160 http://deb.debian.org/debian unstable/main amd64 libglapi-mesa amd64 24.1.5-3 [37.1 kB]
Get:161 http://deb.debian.org/debian unstable/main amd64 libx11-xcb1 amd64 2:1.8.7-1+b1 [232 kB]
Get:162 http://deb.debian.org/debian unstable/main amd64 libxcb-dri2-0 amd64 1.17.0-2 [106 kB]
Get:163 http://deb.debian.org/debian unstable/main amd64 libxcb-dri3-0 amd64 1.17.0-2 [107 kB]
Get:164 http://deb.debian.org/debian unstable/main amd64 libxcb-glx0 amd64 1.17.0-2 [122 kB]
Get:165 http://deb.debian.org/debian unstable/main amd64 libxcb-present0 amd64 1.17.0-2 [105 kB]
Get:166 http://deb.debian.org/debian unstable/main amd64 libxcb-randr0 amd64 1.17.0-2 [116 kB]
Get:167 http://deb.debian.org/debian unstable/main amd64 libxcb-sync1 amd64 1.17.0-2 [108 kB]
Get:168 http://deb.debian.org/debian unstable/main amd64 libxcb-xfixes0 amd64 1.17.0-2 [109 kB]
Get:169 http://deb.debian.org/debian unstable/main amd64 libxshmfence1 amd64 1.3-1+b1 [8852 B]
Get:170 http://deb.debian.org/debian unstable/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB]
Get:171 http://deb.debian.org/debian unstable/main amd64 libvulkan1 amd64 1.3.283.0-1 [125 kB]
Get:172 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.122-1 [22.2 kB]
Get:173 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b1 [51.9 kB]
Get:174 http://deb.debian.org/debian unstable/main amd64 libdrm-intel1 amd64 2.4.122-1 [63.6 kB]
Get:175 http://deb.debian.org/debian unstable/main amd64 libdrm-radeon1 amd64 2.4.122-1 [22.3 kB]
Get:176 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20240517-1 [93.3 kB]
Get:177 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.8.12-3.1+b2 [7346 kB]
Get:178 http://deb.debian.org/debian unstable/main amd64 libllvm17t64 amd64 1:17.0.6-15 [23.6 MB]
Get:179 http://deb.debian.org/debian unstable/main amd64 libsensors-config all 1:3.6.0-10 [14.6 kB]
Get:180 http://deb.debian.org/debian unstable/main amd64 libsensors5 amd64 1:3.6.0-10 [34.7 kB]
Get:181 http://deb.debian.org/debian unstable/main amd64 libgl1-mesa-dri amd64 24.1.5-3 [8717 kB]
Get:182 http://deb.debian.org/debian unstable/main amd64 libglx-mesa0 amd64 24.1.5-3 [153 kB]
Get:183 http://deb.debian.org/debian unstable/main amd64 libglx0 amd64 1.7.0-1+b1 [35.0 kB]
Get:184 http://deb.debian.org/debian unstable/main amd64 libgl1 amd64 1.7.0-1+b1 [89.8 kB]
Get:185 http://deb.debian.org/debian unstable/main amd64 libasound2-data all 1.2.12-1 [21.0 kB]
Get:186 http://deb.debian.org/debian unstable/main amd64 libasound2t64 amd64 1.2.12-1 [369 kB]
Get:187 http://deb.debian.org/debian unstable/main amd64 libgif7 amd64 5.2.2-1 [43.9 kB]
Get:188 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+23.1 [216 kB]
Get:189 http://deb.debian.org/debian unstable/main amd64 libxtst6 amd64 2:1.2.3-1.1+b1 [25.9 kB]
Get:190 http://deb.debian.org/debian unstable/main amd64 openjdk-21-jre amd64 21.0.4+7-2 [204 kB]
Get:191 http://deb.debian.org/debian unstable/main amd64 default-jre amd64 2:1.21-76 [1068 B]
Get:192 http://deb.debian.org/debian unstable/main amd64 openjdk-21-jdk-headless amd64 21.0.4+7-2 [82.8 MB]
Get:193 http://deb.debian.org/debian unstable/main amd64 default-jdk-headless amd64 2:1.21-76 [1124 B]
Get:194 http://deb.debian.org/debian unstable/main amd64 openjdk-21-jdk amd64 21.0.4+7-2 [3467 kB]
Get:195 http://deb.debian.org/debian unstable/main amd64 default-jdk amd64 2:1.21-76 [1076 B]
Get:196 http://deb.debian.org/debian unstable/main amd64 libfile-dirlist-perl all 0.05-3 [7600 B]
Get:197 http://deb.debian.org/debian unstable/main amd64 libfile-which-perl all 1.27-2 [15.1 kB]
Get:198 http://deb.debian.org/debian unstable/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB]
Get:199 http://deb.debian.org/debian unstable/main amd64 libfile-touch-perl all 0.12-2 [8816 B]
Get:200 http://deb.debian.org/debian unstable/main amd64 libio-pty-perl amd64 1:1.20-1+b1 [34.4 kB]
Get:201 http://deb.debian.org/debian unstable/main amd64 libipc-run-perl all 20231003.0-2 [101 kB]
Get:202 http://deb.debian.org/debian unstable/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB]
Get:203 http://deb.debian.org/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b3 [36.2 kB]
Get:204 http://deb.debian.org/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b1 [10.6 kB]
Get:205 http://deb.debian.org/debian unstable/main amd64 libdynaloader-functions-perl all 0.004-1 [12.1 kB]
Get:206 http://deb.debian.org/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.009-1 [15.9 kB]
Get:207 http://deb.debian.org/debian unstable/main amd64 libparams-classify-perl amd64 0.015-2+b3 [22.4 kB]
Get:208 http://deb.debian.org/debian unstable/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB]
Get:209 http://deb.debian.org/debian unstable/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB]
Get:210 http://deb.debian.org/debian unstable/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB]
Get:211 http://deb.debian.org/debian unstable/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB]
Get:212 http://deb.debian.org/debian unstable/main amd64 libmoo-perl all 2.005005-1 [58.0 kB]
Get:213 http://deb.debian.org/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB]
Get:214 http://deb.debian.org/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB]
Get:215 http://deb.debian.org/debian unstable/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB]
Get:216 http://deb.debian.org/debian unstable/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB]
Get:217 http://deb.debian.org/debian unstable/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB]
Get:218 http://deb.debian.org/debian unstable/main amd64 liburi-perl all 5.28-1 [98.6 kB]
Get:219 http://deb.debian.org/debian unstable/main amd64 libhtml-parser-perl amd64 3.83-1 [99.4 kB]
Get:220 http://deb.debian.org/debian unstable/main amd64 libhtml-tree-perl all 5.07-3 [211 kB]
Get:221 http://deb.debian.org/debian unstable/main amd64 libclone-perl amd64 0.46-1+b2 [13.7 kB]
Get:222 http://deb.debian.org/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB]
Get:223 http://deb.debian.org/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB]
Get:224 http://deb.debian.org/debian unstable/main amd64 libhttp-message-perl all 6.46-1 [79.7 kB]
Get:225 http://deb.debian.org/debian unstable/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB]
Get:226 http://deb.debian.org/debian unstable/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB]
Get:227 http://deb.debian.org/debian unstable/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B]
Get:228 http://deb.debian.org/debian unstable/main amd64 libnet-ssleay-perl amd64 1.94-1+b1 [339 kB]
Get:229 http://deb.debian.org/debian unstable/main amd64 libio-socket-ssl-perl all 2.088-1 [222 kB]
Get:230 http://deb.debian.org/debian unstable/main amd64 libnet-http-perl all 6.23-1 [23.9 kB]
Get:231 http://deb.debian.org/debian unstable/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB]
Get:232 http://deb.debian.org/debian unstable/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB]
Get:233 http://deb.debian.org/debian unstable/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB]
Get:234 http://deb.debian.org/debian unstable/main amd64 libwww-perl all 6.77-1 [183 kB]
Get:235 http://deb.debian.org/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB]
Get:236 http://deb.debian.org/debian unstable/main amd64 wdiff amd64 1.2.2-6 [119 kB]
Get:237 http://deb.debian.org/debian unstable/main amd64 devscripts all 2.23.7 [1068 kB]
Get:238 http://deb.debian.org/debian unstable/main amd64 libfakeroot amd64 1.35.1-1 [28.6 kB]
Get:239 http://deb.debian.org/debian unstable/main amd64 fakeroot amd64 1.35.1-1 [74.5 kB]
Get:240 http://deb.debian.org/debian unstable/main amd64 fastjar amd64 2:0.98-7 [80.1 kB]
Get:241 http://deb.debian.org/debian unstable/main amd64 jaligner all 1.0+dfsg-11 [133 kB]
Get:242 http://deb.debian.org/debian unstable/main amd64 jarwrapper all 0.80 [9692 B]
Get:243 http://deb.debian.org/debian unstable/main amd64 javahelper all 0.80 [80.4 kB]
Get:244 http://deb.debian.org/debian unstable/main amd64 libatinject-jsr330-api-java all 1.0+ds1-5 [5312 B]
Get:245 http://deb.debian.org/debian unstable/main amd64 libbrotli-dev amd64 1.1.0-2+b4 [313 kB]
Get:246 http://deb.debian.org/debian unstable/main amd64 libnghttp3-9 amd64 1.4.0-1 [63.1 kB]
Get:247 http://deb.debian.org/debian unstable/main amd64 libngtcp2-16 amd64 1.6.0-1 [122 kB]
Get:248 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.6.0-1 [19.6 kB]
Get:249 http://deb.debian.org/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.9.1-1 [470 kB]
Get:250 http://deb.debian.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10 [181 kB]
Get:251 http://deb.debian.org/debian unstable/main amd64 libunbound8 amd64 1.20.0-1+b1 [583 kB]
Get:252 http://deb.debian.org/debian unstable/main amd64 libgnutls-dane0t64 amd64 3.8.6-2 [439 kB]
Get:253 http://deb.debian.org/debian unstable/main amd64 libgnutls-openssl27t64 amd64 3.8.6-2 [439 kB]
Get:254 http://deb.debian.org/debian unstable/main amd64 libidn2-dev amd64 2.3.7-2 [123 kB]
Get:255 http://deb.debian.org/debian unstable/main amd64 libp11-kit-dev amd64 0.25.5-2 [208 kB]
Get:256 http://deb.debian.org/debian unstable/main amd64 libtasn1-6-dev amd64 4.19.0-3+b2 [98.0 kB]
Get:257 http://deb.debian.org/debian unstable/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-2+b1 [329 kB]
Get:258 http://deb.debian.org/debian unstable/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-2+b1 [640 kB]
Get:259 http://deb.debian.org/debian unstable/main amd64 nettle-dev amd64 3.10-1 [1316 kB]
Get:260 http://deb.debian.org/debian unstable/main amd64 libgnutls28-dev amd64 3.8.6-2 [1381 kB]
Get:261 http://deb.debian.org/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-3 [36.2 kB]
Get:262 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-3 [29.9 kB]
Get:263 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 1.8.1-3 [26.1 kB]
Get:264 http://deb.debian.org/debian unstable/main amd64 libnghttp2-dev amd64 1.62.1-2 [115 kB]
Get:265 http://deb.debian.org/debian unstable/main amd64 libnghttp3-dev amd64 1.4.0-1 [86.5 kB]
Get:266 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls-dev amd64 1.6.0-1 [23.8 kB]
Get:267 http://deb.debian.org/debian unstable/main amd64 libngtcp2-dev amd64 1.6.0-1 [170 kB]
Get:268 http://deb.debian.org/debian unstable/main amd64 libpsl-dev amd64 0.21.2-1.1 [77.4 kB]
Get:269 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1 [919 kB]
Get:270 http://deb.debian.org/debian unstable/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-2+b4 [67.7 kB]
Get:271 http://deb.debian.org/debian unstable/main amd64 libssl-dev amd64 3.3.1-2 [2739 kB]
Get:272 http://deb.debian.org/debian unstable/main amd64 libssh2-1-dev amd64 1.11.0-7 [357 kB]
Get:273 http://deb.debian.org/debian unstable/main amd64 libzstd-dev amd64 1.5.6+dfsg-1 [368 kB]
Get:274 http://deb.debian.org/debian unstable/main amd64 libcurl4-gnutls-dev amd64 8.9.1-1 [582 kB]
Get:275 http://deb.debian.org/debian unstable/main amd64 libdeflate-dev amd64 1.20-1 [54.5 kB]
Get:276 http://deb.debian.org/debian unstable/main amd64 libjsr305-java all 0.1~+svn49-11 [26.9 kB]
Get:277 http://deb.debian.org/debian unstable/main amd64 libguava-java all 32.0.1-1 [2708 kB]
Get:278 http://deb.debian.org/debian unstable/main amd64 liberror-prone-java all 2.18.0-1 [22.5 kB]
Get:279 http://deb.debian.org/debian unstable/main amd64 libgetopt-java all 1.0.14+dfsg-6 [25.7 kB]
Get:280 http://deb.debian.org/debian unstable/main amd64 libhtscodecs2 amd64 1.6.0-1+b1 [93.0 kB]
Get:281 http://deb.debian.org/debian unstable/main amd64 libhts3t64 amd64 1.20+ds-1 [452 kB]
Get:282 http://deb.debian.org/debian unstable/main amd64 liblzma-dev amd64 5.6.2-2 [299 kB]
Get:283 http://deb.debian.org/debian unstable/main amd64 libhts-dev amd64 1.20+ds-1 [1684 kB]
Get:284 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:285 http://deb.debian.org/debian unstable/main amd64 libjung-free-java all 2.1.1-2 [1477 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Current default time zone: 'Etc/UTC'
Local time is now:      Mon Aug  5 23:47:50 UTC 2024.
Universal Time is now:  Mon Aug  5 23:47:50 UTC 2024.
Run 'dpkg-reconfigure tzdata' if you wish to change it.

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Setting up libxcb-dri2-0:amd64 (1.17.0-2) ...
Setting up libgif7:amd64 (5.2.2-1) ...
Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1) ...
Setting up dwz (0.15-1+b1) ...
Setting up sensible-utils (0.0.24) ...
Setting up libxshmfence1:amd64 (1.3-1+b1) ...
Setting up at-spi2-common (2.52.0-1) ...
Setting up librhash0:amd64 (1.4.3-3+b1) ...
Setting up libtiff6:amd64 (4.5.1+git230720-4) ...
Setting up libxcb-randr0:amd64 (1.17.0-2) ...
Setting up dbus-session-bus-common (1.14.10-4) ...
Setting up libuchardet0:amd64 (0.0.8-1+b1) ...
Setting up procps (2:4.0.4-5) ...
Setting up librole-tiny-perl (2.002004-1) ...
Setting up libx11-6:amd64 (2:1.8.7-1+b1) ...
Setting up libthai-data (0.1.29-2) ...
Setting up netbase (6.4) ...

Configuration file '/etc/protocols'
 ==> File on system created by you or by a script.
 ==> File also in package provided by package maintainer.
 ==> Using current old file as you requested.

Configuration file '/etc/services'
 ==> File on system created by you or by a script.
 ==> File also in package provided by package maintainer.
 ==> Using current old file as you requested.
Setting up libngtcp2-16:amd64 (1.6.0-1) ...
Setting up libsub-quote-perl (2.006008-1) ...
Setting up libclass-xsaccessor-perl (1.19-4+b3) ...
Setting up cmake-data (3.30.2-1) ...
Setting up libkrb5-3:amd64 (1.21.3-3) ...
Setting up libwayland-egl1:amd64 (1.23.0-1) ...
Setting up libssh2-1t64:amd64 (1.11.0-7) ...
Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Setting up libfile-dirlist-perl (0.05-3) ...
Setting up dbus-system-bus-common (1.14.10-4) ...
Setting up libfile-homedir-perl (1.006-2) ...
Setting up libtasn1-6-dev:amd64 (4.19.0-3+b2) ...
Setting up openssl (3.3.1-2) ...
Setting up libdeflate-dev:amd64 (1.20-1) ...
Setting up libdrm-common (2.4.122-1) ...
Setting up libxcomposite1:amd64 (1:0.4.5-1+b1) ...
Setting up libxml2:amd64 (2.12.7+dfsg-3+b1) ...
Setting up liburi-perl (5.28-1) ...
Setting up dbus-bin (1.14.10-4+b1) ...
Setting up libbrotli-dev:amd64 (1.1.0-2+b4) ...
Setting up libfile-touch-perl (0.12-2) ...
Setting up libngtcp2-crypto-gnutls8:amd64 (1.6.0-1) ...
Setting up libp11-kit-dev:amd64 (0.25.5-2) ...
Setting up dctrl-tools (2.24-3+b1) ...
Setting up libxkbcommon0:amd64 (1.6.0-1+b1) ...
Setting up libwayland-client0:amd64 (1.23.0-1) ...
Setting up libnet-ssleay-perl:amd64 (1.94-1+b1) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.14.0-1) ...
Setting up libxcb-dri3-0:amd64 (1.17.0-2) ...
Setting up libx11-xcb1:amd64 (2:1.8.7-1+b1) ...
Setting up libhttp-date-perl (6.06-1) ...
Setting up gettext (0.22.5-2) ...
Setting up libxdamage1:amd64 (1:1.1.6-1+b1) ...
Setting up libgmp-dev:amd64 (2:6.3.0+dfsg-2+b1) ...
Setting up libatk1.0-0t64:amd64 (2.52.0-1) ...
Setting up libfile-listing-perl (6.16-1) ...
Setting up libpython3.12-stdlib:amd64 (3.12.4-3) ...
Setting up nettle-dev:amd64 (3.10-1) ...
Setting up libxrender1:amd64 (1:0.9.10-1.1+b1) ...
Setting up jarwrapper (0.80) ...
Setting up libtool (2.4.7-7) ...
Setting up fontconfig-config (2.15.0-1.1) ...
Setting up python3.12 (3.12.4-3) ...
Setting up libavahi-common3:amd64 (0.8-13+b2) ...
Setting up libcloudproviders0:amd64 (0.3.6-1) ...
Setting up libxext6:amd64 (2:1.3.4-1+b1) ...
Setting up libnet-http-perl (6.23-1) ...
Setting up libnss3:amd64 (2:3.102-1) ...
Setting up libngtcp2-crypto-gnutls-dev:amd64 (1.6.0-1) ...
Setting up dbus-daemon (1.14.10-4+b1) ...
Setting up libngtcp2-dev:amd64 (1.6.0-1) ...
Setting up libdevel-callchecker-perl:amd64 (0.009-1) ...
Setting up libcolord2:amd64 (1.4.7-1+b1) ...
Setting up pkgconf:amd64 (1.8.1-3) ...
Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up libdconf1:amd64 (0.40.0-4+b2) ...
Setting up dh-autoreconf (20) ...
Setting up patchutils (0.4.2-1) ...
Setting up libthai0:amd64 (0.1.29-2) ...
Setting up ca-certificates (20240203) ...
Updating certificates in /etc/ssl/certs...
146 added, 0 removed; done.
Setting up libllvm17t64:amd64 (1:17.0.6-15) ...
Setting up libfreetype6:amd64 (2.13.2+dfsg-1+b4) ...
Setting up libxfixes3:amd64 (1:6.0.0-2+b1) ...
Setting up dbus (1.14.10-4+b1) ...
Running in chroot, ignoring request.
Setting up shared-mime-info (2.4-5) ...
Setting up libxinerama1:amd64 (2:1.1.4-3+b1) ...
Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ...
Setting up libxrandr2:amd64 (2:1.5.4-1) ...
Setting up libssh2-1-dev:amd64 (1.11.0-7) ...
Setting up dh-strip-nondeterminism (1.14.0-1) ...
Setting up libwww-robotrules-perl (6.02-1) ...
Setting up libdrm2:amd64 (2.4.122-1) ...
Setting up groff-base (1.23.0-5) ...
Setting up libwayland-cursor0:amd64 (1.23.0-1) ...
Setting up libhtml-parser-perl:amd64 (3.83-1) ...
Setting up libpam-systemd:amd64 (256.4-2) ...
Setting up libharfbuzz0b:amd64 (8.3.0-2+b1) ...
Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1) ...
Setting up libfontconfig1:amd64 (2.15.0-1.1) ...
Setting up ca-certificates-java (20240118) ...
No JRE found. Skipping Java certificates setup.
Setting up libarchive13t64:amd64 (3.7.2-2.1) ...
Setting up libavahi-client3:amd64 (0.8-13+b2) ...
Setting up libio-socket-ssl-perl (2.088-1) ...
Setting up libpython3-stdlib:amd64 (3.12.4-1) ...
Setting up libhttp-message-perl (6.46-1) ...
Setting up libdrm-amdgpu1:amd64 (2.4.122-1) ...
Setting up libgnutls28-dev:amd64 (3.8.6-2) ...
Setting up gtk-update-icon-cache (3.24.43-1) ...
Setting up libnghttp2-dev:amd64 (1.62.1-2) ...
Setting up libhttp-negotiate-perl (6.01-2) ...
Setting up fontconfig (2.15.0-1.1) ...
Regenerating fonts cache... done.
Setting up openjdk-21-jre-headless:amd64 (21.0.4+7-2) ...
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
Setting up libxi6:amd64 (2:1.8.1-1) ...
Setting up libcurl4t64:amd64 (8.9.1-1) ...
Setting up libhttp-cookies-perl (6.11-1) ...
Setting up libdrm-radeon1:amd64 (2.4.122-1) ...
Setting up libxtst6:amd64 (2:1.2.3-1.1+b1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libhtml-tree-perl (5.07-3) ...
Setting up libxcursor1:amd64 (1:1.2.2-1) ...
Setting up libparams-classify-perl:amd64 (0.015-2+b3) ...
Setting up libpango-1.0-0:amd64 (1.54.0+ds-1) ...
Setting up libdrm-intel1:amd64 (2.4.122-1) ...
Setting up libgl1-mesa-dri:amd64 (24.1.5-3) ...
Setting up libcurl3t64-gnutls:amd64 (8.9.1-1) ...
Setting up python3 (3.12.4-1) ...
Setting up man-db (2.12.1-2) ...
Not building database; man-db/auto-update is not 'true'.
Created symlink '/etc/systemd/system/timers.target.wants/man-db.timer' → '/usr/lib/systemd/system/man-db.timer'.
Setting up libcairo2:amd64 (1.18.0-3+b1) ...
Setting up dbus-user-session (1.14.10-4+b1) ...
Setting up adwaita-icon-theme (46.0-1) ...
update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode
Setting up libmodule-runtime-perl (0.016-2) ...
Setting up libatspi2.0-0t64:amd64 (2.52.0-1) ...
Setting up librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ...
Setting up cmake (3.30.2-1) ...
Setting up libhts3t64:amd64 (1.20+ds-1) ...
Setting up libcairo-gobject2:amd64 (1.18.0-3+b1) ...
Setting up libpangoft2-1.0-0:amd64 (1.54.0+ds-1) ...
Setting up libcups2t64:amd64 (2.4.10-1) ...
Setting up libpangocairo-1.0-0:amd64 (1.54.0+ds-1) ...
Setting up libatk-bridge2.0-0t64:amd64 (2.52.0-1) ...
Setting up libglx-mesa0:amd64 (24.1.5-3) ...
Setting up libglx0:amd64 (1.7.0-1+b1) ...
Setting up libimport-into-perl (1.002005-2) ...
Setting up libmoo-perl (2.005005-1) ...
Setting up debhelper (13.16) ...
Setting up dconf-service (0.40.0-4+b2) ...
Setting up libcurl4-gnutls-dev:amd64 (8.9.1-1) ...
Setting up libgl1:amd64 (1.7.0-1+b1) ...
Setting up dconf-gsettings-backend:amd64 (0.40.0-4+b2) ...
Setting up libhts-dev:amd64 (1.20+ds-1) ...
Setting up libgtk-3-common (3.24.43-1) ...
Setting up libgtk-3-0t64:amd64 (3.24.43-1) ...
Setting up libwww-perl (6.77-1) ...
Setting up devscripts (2.23.7) ...
Setting up libguava-java (32.0.1-1) ...
Setting up javahelper (0.80) ...
Setting up liblwp-protocol-https-perl (6.14-1) ...
Setting up liberror-prone-java (2.18.0-1) ...
Setting up libjung-free-java (2.1.1-2) ...
Processing triggers for libc-bin (2.39-6) ...
Processing triggers for systemd (256.4-2) ...
Processing triggers for ca-certificates-java (20240118) ...
Adding debian:ACCVRAIZ1.pem
Adding debian:AC_RAIZ_FNMT-RCM.pem
Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem
Adding debian:Actalis_Authentication_Root_CA.pem
Adding debian:AffirmTrust_Commercial.pem
Adding debian:AffirmTrust_Networking.pem
Adding debian:AffirmTrust_Premium_ECC.pem
Adding debian:AffirmTrust_Premium.pem
Adding debian:Amazon_Root_CA_1.pem
Adding debian:Amazon_Root_CA_2.pem
Adding debian:Amazon_Root_CA_3.pem
Adding debian:Amazon_Root_CA_4.pem
Adding debian:ANF_Secure_Server_Root_CA.pem
Adding debian:Atos_TrustedRoot_2011.pem
Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem
Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem
Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
Adding debian:Baltimore_CyberTrust_Root.pem
Adding debian:BJCA_Global_Root_CA1.pem
Adding debian:BJCA_Global_Root_CA2.pem
Adding debian:Buypass_Class_2_Root_CA.pem
Adding debian:Buypass_Class_3_Root_CA.pem
Adding debian:CA_Disig_Root_R2.pem
Adding debian:Certainly_Root_E1.pem
Adding debian:Certainly_Root_R1.pem
Adding debian:Certigna.pem
Adding debian:Certigna_Root_CA.pem
Adding debian:certSIGN_Root_CA_G2.pem
Adding debian:certSIGN_ROOT_CA.pem
Adding debian:Certum_EC-384_CA.pem
Adding debian:Certum_Trusted_Network_CA_2.pem
Adding debian:Certum_Trusted_Network_CA.pem
Adding debian:Certum_Trusted_Root_CA.pem
Adding debian:CFCA_EV_ROOT.pem
Adding debian:CommScope_Public_Trust_ECC_Root-01.pem
Adding debian:CommScope_Public_Trust_ECC_Root-02.pem
Adding debian:CommScope_Public_Trust_RSA_Root-01.pem
Adding debian:CommScope_Public_Trust_RSA_Root-02.pem
Adding debian:Comodo_AAA_Services_root.pem
Adding debian:COMODO_Certification_Authority.pem
Adding debian:COMODO_ECC_Certification_Authority.pem
Adding debian:COMODO_RSA_Certification_Authority.pem
Adding debian:DigiCert_Assured_ID_Root_CA.pem
Adding debian:DigiCert_Assured_ID_Root_G2.pem
Adding debian:DigiCert_Assured_ID_Root_G3.pem
Adding debian:DigiCert_Global_Root_CA.pem
Adding debian:DigiCert_Global_Root_G2.pem
Adding debian:DigiCert_Global_Root_G3.pem
Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem
Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem
Adding debian:DigiCert_Trusted_Root_G4.pem
Adding debian:D-TRUST_BR_Root_CA_1_2020.pem
Adding debian:D-TRUST_EV_Root_CA_1_2020.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
Adding debian:emSign_ECC_Root_CA_-_C3.pem
Adding debian:emSign_ECC_Root_CA_-_G3.pem
Adding debian:emSign_Root_CA_-_C1.pem
Adding debian:emSign_Root_CA_-_G1.pem
Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
Adding debian:Entrust_Root_Certification_Authority_-_G4.pem
Adding debian:Entrust_Root_Certification_Authority.pem
Adding debian:ePKI_Root_Certification_Authority.pem
Adding debian:e-Szigno_Root_CA_2017.pem
Adding debian:GDCA_TrustAUTH_R5_ROOT.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
Adding debian:GlobalSign_Root_CA.pem
Adding debian:GlobalSign_Root_CA_-_R3.pem
Adding debian:GlobalSign_Root_CA_-_R6.pem
Adding debian:GlobalSign_Root_E46.pem
Adding debian:GlobalSign_Root_R46.pem
Adding debian:GLOBALTRUST_2020.pem
Adding debian:Go_Daddy_Class_2_CA.pem
Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
Adding debian:GTS_Root_R1.pem
Adding debian:GTS_Root_R2.pem
Adding debian:GTS_Root_R3.pem
Adding debian:GTS_Root_R4.pem
Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem
Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem
Adding debian:HiPKI_Root_CA_-_G1.pem
Adding debian:Hongkong_Post_Root_CA_3.pem
Adding debian:IdenTrust_Commercial_Root_CA_1.pem
Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
Adding debian:ISRG_Root_X1.pem
Adding debian:ISRG_Root_X2.pem
Adding debian:Izenpe.com.pem
Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem
Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem
Adding debian:NAVER_Global_Root_Certification_Authority.pem
Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem
Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem
Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem
Adding debian:QuoVadis_Root_CA_1_G3.pem
Adding debian:QuoVadis_Root_CA_2_G3.pem
Adding debian:QuoVadis_Root_CA_2.pem
Adding debian:QuoVadis_Root_CA_3_G3.pem
Adding debian:QuoVadis_Root_CA_3.pem
Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem
Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem
Adding debian:Secure_Global_CA.pem
Adding debian:SecureSign_RootCA11.pem
Adding debian:SecureTrust_CA.pem
Adding debian:Security_Communication_ECC_RootCA1.pem
Adding debian:Security_Communication_RootCA2.pem
Adding debian:Security_Communication_RootCA3.pem
Adding debian:Security_Communication_Root_CA.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem
Adding debian:SSL.com_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_Root_Certification_Authority_RSA.pem
Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem
Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem
Adding debian:Starfield_Class_2_CA.pem
Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
Adding debian:SwissSign_Gold_CA_-_G2.pem
Adding debian:SwissSign_Silver_CA_-_G2.pem
Adding debian:SZAFIR_ROOT_CA2.pem
Adding debian:Telia_Root_CA_v2.pem
Adding debian:TeliaSonera_Root_CA_v1.pem
Adding debian:TrustAsia_Global_Root_CA_G3.pem
Adding debian:TrustAsia_Global_Root_CA_G4.pem
Adding debian:Trustwave_Global_Certification_Authority.pem
Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem
Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem
Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem
Adding debian:TunTrust_Root_CA.pem
Adding debian:TWCA_Global_Root_CA.pem
Adding debian:TWCA_Root_Certification_Authority.pem
Adding debian:UCA_Extended_Validation_Root.pem
Adding debian:UCA_Global_G2_Root.pem
Adding debian:USERTrust_ECC_Certification_Authority.pem
Adding debian:USERTrust_RSA_Certification_Authority.pem
Adding debian:vTrus_ECC_Root_CA.pem
Adding debian:vTrus_Root_CA.pem
Adding debian:XRamp_Global_CA_Root.pem
done.
Setting up openjdk-21-jre:amd64 (21.0.4+7-2) ...
Setting up openjdk-21-jdk-headless:amd64 (21.0.4+7-2) ...
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jar to provide /usr/bin/jar (jar) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javac to provide /usr/bin/javac (javac) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javap to provide /usr/bin/javap (javap) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jps to provide /usr/bin/jps (jps) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode
Setting up default-jre-headless (2:1.21-76) ...
Setting up jaligner (1.0+dfsg-11) ...
Setting up default-jre (2:1.21-76) ...
Setting up openjdk-21-jdk:amd64 (21.0.4+7-2) ...
update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode
Setting up default-jdk-headless (2:1.21-76) ...
Setting up default-jdk (2:1.21-76) ...
Setting up sbuild-build-depends-main-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20240203) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for ca-certificates-java (20240118) ...
done.

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (amd64 included in amd64 arm64 ppc64el riscv64 loong64)

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 6.9.7-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.9.7-1 (2024-06-27) amd64 (x86_64)
Toolchain package versions: binutils_2.43-1 dpkg-dev_1.22.11 g++-13_13.3.0-5 g++-14_14.2.0-1 gcc-13_13.3.0-5 gcc-14_14.2.0-1 libc6-dev_2.39-6 libstdc++-13-dev_13.3.0-5 libstdc++-14-dev_14.2.0-1 libstdc++6_14.2.0-1 linux-libc-dev_6.10.3-1
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+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 3.0 (quilt)
Source: trinityrnaseq
Binary: trinityrnaseq, trinityrnaseq-examples
Architecture: amd64 arm64 ppc64el riscv64 loong64
Version: 2.15.1+dfsg-5
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Michael R. Crusoe <crusoe@debian.org>
Homepage: https://github.com/trinityrnaseq/trinityrnaseq
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/trinityrnaseq
Vcs-Git: https://salsa.debian.org/med-team/trinityrnaseq.git
Testsuite: autopkgtest
Testsuite-Triggers: hisat2, libpicard-java, python3-hisat2, r-bioc-deseq2, r-bioc-dexseq, r-bioc-edger, r-bioc-goseq, r-bioc-qvalue, r-cran-argparse, r-cran-cluster, r-cran-fastcluster, r-cran-goplot, r-cran-kernsmooth, r-cran-tidyverse, salmon
Build-Depends: debhelper-compat (= 13), libjung-free-java (>= 2.1.1), javahelper, libgetopt-java, default-jdk, libjs-jquery, jaligner, libhts-dev, zlib1g-dev, cmake
Package-List:
 trinityrnaseq deb science optional arch=amd64,arm64,ppc64el,riscv64,loong64
 trinityrnaseq-examples deb science optional arch=amd64,arm64,ppc64el,riscv64,loong64
Checksums-Sha1:
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 0ce99db551777c616526db8ae5ddbae1d64c3b39 39352 trinityrnaseq_2.15.1+dfsg-5.debian.tar.xz
Checksums-Sha256:
 b4892295ab2e92cf77b3f1022dac79945238436a81210538446e88b93e71c362 307318092 trinityrnaseq_2.15.1+dfsg.orig.tar.xz
 aabf9b51f963d4149fba77327a1588591020b620128cd330cf0429e926f379cd 39352 trinityrnaseq_2.15.1+dfsg-5.debian.tar.xz
Files:
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gpgv: Signature made Sat Dec 23 22:41:43 2023 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tillea@rki.de"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./trinityrnaseq_2.15.1+dfsg-5.dsc: no acceptable signature found
dpkg-source: info: extracting trinityrnaseq in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking trinityrnaseq_2.15.1+dfsg.orig.tar.xz
dpkg-source: info: unpacking trinityrnaseq_2.15.1+dfsg-5.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying update-paths
dpkg-source: info: applying collections15-to-4
dpkg-source: info: applying 0002-fix_istream_failure_call.patch
dpkg-source: info: applying fix_system_paths
dpkg-source: info: applying disable-version-check
dpkg-source: info: applying adjust-trimmomatic-adapters-path
dpkg-source: info: applying NeedlemanWunschGotohBanded.patch
dpkg-source: info: applying python3
dpkg-source: info: applying unfix_num_of_cores
dpkg-source: info: applying hardening
dpkg-source: info: applying seqtk-trinity-hardening
dpkg-source: info: applying skip_gatk_test
dpkg-source: info: applying skip_tximportData_tests
dpkg-source: info: applying submake
dpkg-source: info: applying skip_blat
dpkg-source: info: applying fix-gcc-10.patch
dpkg-source: info: applying bamsifter_build
dpkg-source: info: applying strip_m64
dpkg-source: info: applying extending_Function_in_jung.patch
dpkg-source: info: applying R_4.2_fix

Check disk space
----------------

Sufficient free space for build

+------------------------------------------------------------------------------+
| Starting Timed Build Commands                                                |
+------------------------------------------------------------------------------+


/usr/share/debomatic/sbuildcommands/starting-build-commands/no-network trinityrnaseq_2.15.1+dfsg-5 sid amd64
------------------------------------------------------------------------------------------------------------


I: Finished running '/usr/share/debomatic/sbuildcommands/starting-build-commands/no-network trinityrnaseq_2.15.1+dfsg-5 sid amd64'.

Finished processing commands.
--------------------------------------------------------------------------------

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
HOME=/sbuild-nonexistent
LANG=en_GB.UTF-8
LANGUAGE=en_GB:en
LC_ALL=C.UTF-8
LD_LIBRARY_PATH=/usr/lib/libeatmydata
LD_PRELOAD=libeatmydata.so
LOGNAME=debomatic
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/<<PKGBUILDDIR>>
SCHROOT_ALIAS_NAME=sid-amd64-debomatic
SCHROOT_CHROOT_NAME=sid-amd64-debomatic
SCHROOT_COMMAND=env
SCHROOT_GID=110
SCHROOT_GROUP=sbuild
SCHROOT_SESSION_ID=sid-amd64-debomatic-2e1441b4-e933-41d4-a73d-82c9409ca37f
SCHROOT_UID=1002
SCHROOT_USER=debomatic
SHELL=/bin/sh
USER=debomatic

dpkg-buildpackage
-----------------

Command: dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -Zxz
dpkg-buildpackage: info: source package trinityrnaseq
dpkg-buildpackage: info: source version 2.15.1+dfsg-5
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Andreas Tille <tille@debian.org>
 dpkg-source -Zxz --before-build .
dpkg-buildpackage: info: host architecture amd64
 debian/rules clean
dh clean --with javahelper
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
for target in Inchworm Chrysalis; do dh_auto_clean \
                --sourcedirectory=${target} --builddirectory=${target}_build; done
for target in trinity-plugins/slclust trinity-plugins/scaffold_iworm_contigs trinity-plugins/bamsifter; do dh_auto_clean \
                --sourcedirectory=${target}; done
	cd trinity-plugins/slclust && make -j2 clean
make[2]: Entering directory '/<<PKGBUILDDIR>>/trinity-plugins/slclust'
X=`pwd`; \
for i in src; \
do echo '<<<' $i '>>>'; cd $X/$i; make clean; done
<<< src >>>
make[3]: Entering directory '/<<PKGBUILDDIR>>/trinity-plugins/slclust/src'
rm -f slcluster.o graph.o graphnode.o cmd_line_opts.o core a.out *~ \#* slclust Makefile.bak \
	../bin/slclust
make[3]: Leaving directory '/<<PKGBUILDDIR>>/trinity-plugins/slclust/src'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/trinity-plugins/slclust'
	cd trinity-plugins/scaffold_iworm_contigs && make -j2 clean
make[2]: Entering directory '/<<PKGBUILDDIR>>/trinity-plugins/scaffold_iworm_contigs'
rm -f scaffold_iworm_contigs
make[2]: Leaving directory '/<<PKGBUILDDIR>>/trinity-plugins/scaffold_iworm_contigs'
rm --force Chrysalis/Makefile_auto
rm --force trinity-plugins/slclust/bin/slclust
cd trinity-plugins && /usr/bin/make clean || true
make[2]: Entering directory '/<<PKGBUILDDIR>>/trinity-plugins'
cd seqtk-trinity && /usr/bin/make clean
make[3]: Entering directory '/<<PKGBUILDDIR>>/trinity-plugins/seqtk-trinity'
rm -fr gmon.out *.o ext/*.o a.out seqtk trimadap *~ *.a *.dSYM session*
make[3]: Leaving directory '/<<PKGBUILDDIR>>/trinity-plugins/seqtk-trinity'
cd scaffold_iworm_contigs && /usr/bin/make clean
make[3]: Entering directory '/<<PKGBUILDDIR>>/trinity-plugins/scaffold_iworm_contigs'
rm -f scaffold_iworm_contigs
make[3]: Leaving directory '/<<PKGBUILDDIR>>/trinity-plugins/scaffold_iworm_contigs'
cd "ParaFly" && /usr/bin/make clean
make[3]: Entering directory '/<<PKGBUILDDIR>>/trinity-plugins/ParaFly'
Making clean in src
make[4]: Entering directory '/<<PKGBUILDDIR>>/trinity-plugins/ParaFly/src'
test -z "ParaFly" || rm -f ParaFly
rm -f *.o
make[4]: Leaving directory '/<<PKGBUILDDIR>>/trinity-plugins/ParaFly/src'
Making clean in .
make[4]: Entering directory '/<<PKGBUILDDIR>>/trinity-plugins/ParaFly'
make[4]: Nothing to be done for 'clean-am'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/trinity-plugins/ParaFly'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/trinity-plugins/ParaFly'
rm -f ./Trimmomatic # rm symlink
cd slclust && /usr/bin/make clean
make[3]: Entering directory '/<<PKGBUILDDIR>>/trinity-plugins/slclust'
X=`pwd`; \
for i in src; \
do echo '<<<' $i '>>>'; cd $X/$i; /usr/bin/make clean; done
<<< src >>>
make[4]: Entering directory '/<<PKGBUILDDIR>>/trinity-plugins/slclust/src'
rm -f slcluster.o graph.o graphnode.o cmd_line_opts.o core a.out *~ \#* slclust Makefile.bak \
	../bin/slclust
make[4]: Leaving directory '/<<PKGBUILDDIR>>/trinity-plugins/slclust/src'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/trinity-plugins/slclust'
cd COLLECTL && rm -rf "collectl-4.1.0" && rm -f collectl
cd htslib && /usr/bin/make clean
/bin/sh: 1: cd: can't cd to htslib
make[2]: *** [Makefile:54: clean] Error 2
make[2]: Leaving directory '/<<PKGBUILDDIR>>/trinity-plugins'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   jh_clean
   dh_clean
 dpkg-source -Zxz -b .
dpkg-source: info: using source format '3.0 (quilt)'
dpkg-source: info: building trinityrnaseq using existing ./trinityrnaseq_2.15.1+dfsg.orig.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: warning: ignoring deletion of file trinity-plugins/ParaFly/config.log, use --include-removal to override
dpkg-source: warning: ignoring deletion of file trinity-plugins/ParaFly/config.status, use --include-removal to override
dpkg-source: info: building trinityrnaseq in trinityrnaseq_2.15.1+dfsg-5.debian.tar.xz
dpkg-source: info: building trinityrnaseq in trinityrnaseq_2.15.1+dfsg-5.dsc
 debian/rules binary
dh binary --with javahelper
   dh_update_autotools_config
   debian/rules override_dh_autoreconf
make[1]: Entering directory '/<<PKGBUILDDIR>>'
echo No need to run autoreconf
No need to run autoreconf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
rm -f Chrysalis/Makefile
for target in Inchworm Chrysalis; do dh_auto_configure \
                --sourcedirectory=${target} --builddirectory=${target}_build; done
	cd Inchworm_build && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu ../Inchworm
CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- The C compiler identification is GNU 14.2.0
-- The CXX compiler identification is GNU 14.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- system: Linux
-- Configuring done (0.5s)
-- Generating done (0.0s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
    CMAKE_FIND_USE_PACKAGE_REGISTRY
    CMAKE_INSTALL_LIBDIR
    CMAKE_INSTALL_LOCALSTATEDIR
    CMAKE_INSTALL_RUNSTATEDIR
    CMAKE_INSTALL_SYSCONFDIR
    FETCHCONTENT_FULLY_DISCONNECTED


-- Build files have been written to: /<<PKGBUILDDIR>>/Inchworm_build
	cd Chrysalis_build && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu ../Chrysalis
CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- The C compiler identification is GNU 14.2.0
-- The CXX compiler identification is GNU 14.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- system: Linux
-- Configuring done (0.5s)
-- Generating done (0.0s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
    CMAKE_FIND_USE_PACKAGE_REGISTRY
    CMAKE_INSTALL_LIBDIR
    CMAKE_INSTALL_LOCALSTATEDIR
    CMAKE_INSTALL_RUNSTATEDIR
    CMAKE_INSTALL_SYSCONFDIR
    FETCHCONTENT_FULLY_DISCONNECTED


-- Build files have been written to: /<<PKGBUILDDIR>>/Chrysalis_build
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   jh_linkjars
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
for target in Inchworm Chrysalis; do dh_auto_build \
                --sourcedirectory=${target} --builddirectory=${target}_build; done
	cd Inchworm_build && make -j2 "INSTALL=install --strip-program=true" VERBOSE=1
make[2]: Entering directory '/<<PKGBUILDDIR>>/Inchworm_build'
/usr/bin/cmake -S/<<PKGBUILDDIR>>/Inchworm -B/<<PKGBUILDDIR>>/Inchworm_build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/Inchworm_build/CMakeFiles /<<PKGBUILDDIR>>/Inchworm_build//CMakeFiles/progress.marks
make  -f CMakeFiles/Makefile2 all
make[3]: Entering directory '/<<PKGBUILDDIR>>/Inchworm_build'
make  -f CMakeFiles/inchworm.dir/build.make CMakeFiles/inchworm.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/Inchworm_build'
cd /<<PKGBUILDDIR>>/Inchworm_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>>/Inchworm /<<PKGBUILDDIR>>/Inchworm /<<PKGBUILDDIR>>/Inchworm_build /<<PKGBUILDDIR>>/Inchworm_build /<<PKGBUILDDIR>>/Inchworm_build/CMakeFiles/inchworm.dir/DependInfo.cmake "--color="
make  -f CMakeFiles/FastaToDeBruijn.dir/build.make CMakeFiles/FastaToDeBruijn.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/Inchworm_build'
cd /<<PKGBUILDDIR>>/Inchworm_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>>/Inchworm /<<PKGBUILDDIR>>/Inchworm /<<PKGBUILDDIR>>/Inchworm_build /<<PKGBUILDDIR>>/Inchworm_build /<<PKGBUILDDIR>>/Inchworm_build/CMakeFiles/FastaToDeBruijn.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Inchworm_build'
make  -f CMakeFiles/FastaToDeBruijn.dir/build.make CMakeFiles/FastaToDeBruijn.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/Inchworm_build'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Inchworm_build'
[  3%] Building CXX object CMakeFiles/FastaToDeBruijn.dir/src/FastaToDeBruijn.cpp.o
make  -f CMakeFiles/inchworm.dir/build.make CMakeFiles/inchworm.dir/build
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/FastaToDeBruijn.dir/src/FastaToDeBruijn.cpp.o -MF CMakeFiles/FastaToDeBruijn.dir/src/FastaToDeBruijn.cpp.o.d -o CMakeFiles/FastaToDeBruijn.dir/src/FastaToDeBruijn.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/FastaToDeBruijn.cpp
make[4]: Entering directory '/<<PKGBUILDDIR>>/Inchworm_build'
[  7%] Building CXX object CMakeFiles/inchworm.dir/src/Fasta_entry.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/inchworm.dir/src/Fasta_entry.cpp.o -MF CMakeFiles/inchworm.dir/src/Fasta_entry.cpp.o.d -o CMakeFiles/inchworm.dir/src/Fasta_entry.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/Fasta_entry.cpp
[ 10%] Building CXX object CMakeFiles/inchworm.dir/src/IRKE_run.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/inchworm.dir/src/IRKE_run.cpp.o -MF CMakeFiles/inchworm.dir/src/IRKE_run.cpp.o.d -o CMakeFiles/inchworm.dir/src/IRKE_run.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/IRKE_run.cpp
/<<PKGBUILDDIR>>/Inchworm/src/FastaToDeBruijn.cpp: In function ‘void createGraphPerRecord(std::vector<std::__cxx11::basic_string<char> >, int, bool, ArgProcessor)’:
/<<PKGBUILDDIR>>/Inchworm/src/FastaToDeBruijn.cpp:215:39: warning: comparison of integer expressions of different signedness: ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  215 |                 if (seq_region.size() < kmer_length) { continue; }  // can be encountered in jaccard-clip mode (rarely)
      |                     ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
In file included from /usr/include/c++/14/ext/hash_map:60,
                 from /<<PKGBUILDDIR>>/Inchworm/src/KmerCounter.hpp:53,
                 from /<<PKGBUILDDIR>>/Inchworm/src/IRKE.hpp:7,
                 from /<<PKGBUILDDIR>>/Inchworm/src/IRKE_run.cpp:11:
/usr/include/c++/14/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp]
   32 | #warning \
      |  ^~~~~~~
[ 14%] Building CXX object CMakeFiles/FastaToDeBruijn.dir/src/argProcessor.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/FastaToDeBruijn.dir/src/argProcessor.cpp.o -MF CMakeFiles/FastaToDeBruijn.dir/src/argProcessor.cpp.o.d -o CMakeFiles/FastaToDeBruijn.dir/src/argProcessor.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/argProcessor.cpp
[ 17%] Building CXX object CMakeFiles/FastaToDeBruijn.dir/src/Fasta_reader.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/FastaToDeBruijn.dir/src/Fasta_reader.cpp.o -MF CMakeFiles/FastaToDeBruijn.dir/src/Fasta_reader.cpp.o.d -o CMakeFiles/FastaToDeBruijn.dir/src/Fasta_reader.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/Fasta_reader.cpp
[ 21%] Building CXX object CMakeFiles/inchworm.dir/src/sequenceUtil.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/inchworm.dir/src/sequenceUtil.cpp.o -MF CMakeFiles/inchworm.dir/src/sequenceUtil.cpp.o.d -o CMakeFiles/inchworm.dir/src/sequenceUtil.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/sequenceUtil.cpp
[ 25%] Building CXX object CMakeFiles/FastaToDeBruijn.dir/src/Fasta_entry.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/FastaToDeBruijn.dir/src/Fasta_entry.cpp.o -MF CMakeFiles/FastaToDeBruijn.dir/src/Fasta_entry.cpp.o.d -o CMakeFiles/FastaToDeBruijn.dir/src/Fasta_entry.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/Fasta_entry.cpp
[ 28%] Building CXX object CMakeFiles/FastaToDeBruijn.dir/src/sequenceUtil.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/FastaToDeBruijn.dir/src/sequenceUtil.cpp.o -MF CMakeFiles/FastaToDeBruijn.dir/src/sequenceUtil.cpp.o.d -o CMakeFiles/FastaToDeBruijn.dir/src/sequenceUtil.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/sequenceUtil.cpp
[ 32%] Building CXX object CMakeFiles/inchworm.dir/src/IRKE.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/inchworm.dir/src/IRKE.cpp.o -MF CMakeFiles/inchworm.dir/src/IRKE.cpp.o.d -o CMakeFiles/inchworm.dir/src/IRKE.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/IRKE.cpp
In file included from /usr/include/c++/14/ext/hash_map:60,
                 from /<<PKGBUILDDIR>>/Inchworm/src/KmerCounter.hpp:53,
                 from /<<PKGBUILDDIR>>/Inchworm/src/IRKE.hpp:7,
                 from /<<PKGBUILDDIR>>/Inchworm/src/IRKE.cpp:21:
/usr/include/c++/14/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp]
   32 | #warning \
      |  ^~~~~~~
[ 35%] Building CXX object CMakeFiles/FastaToDeBruijn.dir/src/string_util.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/FastaToDeBruijn.dir/src/string_util.cpp.o -MF CMakeFiles/FastaToDeBruijn.dir/src/string_util.cpp.o.d -o CMakeFiles/FastaToDeBruijn.dir/src/string_util.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/string_util.cpp
[ 39%] Building CXX object CMakeFiles/FastaToDeBruijn.dir/src/stacktrace.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/FastaToDeBruijn.dir/src/stacktrace.cpp.o -MF CMakeFiles/FastaToDeBruijn.dir/src/stacktrace.cpp.o.d -o CMakeFiles/FastaToDeBruijn.dir/src/stacktrace.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/stacktrace.cpp
[ 42%] Building CXX object CMakeFiles/FastaToDeBruijn.dir/src/DeBruijnGraph.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/FastaToDeBruijn.dir/src/DeBruijnGraph.cpp.o -MF CMakeFiles/FastaToDeBruijn.dir/src/DeBruijnGraph.cpp.o.d -o CMakeFiles/FastaToDeBruijn.dir/src/DeBruijnGraph.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/DeBruijnGraph.cpp
/<<PKGBUILDDIR>>/Inchworm/src/DeBruijnGraph.cpp: In member function ‘std::string DeBruijnKmer::get_annotations_string()’:
/<<PKGBUILDDIR>>/Inchworm/src/DeBruijnGraph.cpp:66:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   66 |     for (int i=0; i < _annotations.size(); i++) {
      |                   ~~^~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Inchworm/src/DeBruijnGraph.cpp: In member function ‘std::string DeBruijnGraph::toDOT(bool)’:
/<<PKGBUILDDIR>>/Inchworm/src/DeBruijnGraph.cpp:445:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  445 |         for (int i=0; i < prev_kmers.size(); i++) {
      |                       ~~^~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Inchworm/src/DeBruijnGraph.cpp:494:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  494 |         for (int i=0; i < next_kmers.size(); i++) {
      |                       ~~^~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Inchworm/src/DeBruijnGraph.cpp: In member function ‘std::string DeBruijnGraph::toChrysalisFormat(int, bool)’:
/<<PKGBUILDDIR>>/Inchworm/src/DeBruijnGraph.cpp:725:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  725 |                 for (int i = 0; i < collected_kmers.size(); i++) {
      |                                 ~~^~~~~~~~~~~~~~~~~~~~~~~~
[ 46%] Building CXX object CMakeFiles/inchworm.dir/src/KmerCounter.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/inchworm.dir/src/KmerCounter.cpp.o -MF CMakeFiles/inchworm.dir/src/KmerCounter.cpp.o.d -o CMakeFiles/inchworm.dir/src/KmerCounter.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/KmerCounter.cpp
In file included from /usr/include/c++/14/ext/hash_map:60,
                 from /<<PKGBUILDDIR>>/Inchworm/src/KmerCounter.hpp:53,
                 from /<<PKGBUILDDIR>>/Inchworm/src/KmerCounter.cpp:1:
/usr/include/c++/14/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp]
   32 | #warning \
      |  ^~~~~~~
[ 50%] Building CXX object CMakeFiles/inchworm.dir/src/string_util.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/inchworm.dir/src/string_util.cpp.o -MF CMakeFiles/inchworm.dir/src/string_util.cpp.o.d -o CMakeFiles/inchworm.dir/src/string_util.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/string_util.cpp
[ 53%] Building CXX object CMakeFiles/inchworm.dir/src/Fasta_reader.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/inchworm.dir/src/Fasta_reader.cpp.o -MF CMakeFiles/inchworm.dir/src/Fasta_reader.cpp.o.d -o CMakeFiles/inchworm.dir/src/Fasta_reader.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/Fasta_reader.cpp
[ 57%] Linking CXX executable FastaToDeBruijn
/usr/bin/cmake -E cmake_link_script CMakeFiles/FastaToDeBruijn.dir/link.txt --verbose=1
/usr/bin/g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -Wl,-z,relro -Wl,-z,now -lm -ldl  -lrt -rdynamic CMakeFiles/FastaToDeBruijn.dir/src/FastaToDeBruijn.cpp.o CMakeFiles/FastaToDeBruijn.dir/src/argProcessor.cpp.o CMakeFiles/FastaToDeBruijn.dir/src/Fasta_reader.cpp.o CMakeFiles/FastaToDeBruijn.dir/src/Fasta_entry.cpp.o CMakeFiles/FastaToDeBruijn.dir/src/sequenceUtil.cpp.o CMakeFiles/FastaToDeBruijn.dir/src/string_util.cpp.o CMakeFiles/FastaToDeBruijn.dir/src/stacktrace.cpp.o CMakeFiles/FastaToDeBruijn.dir/src/DeBruijnGraph.cpp.o -o FastaToDeBruijn
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Inchworm_build'
[ 57%] Built target FastaToDeBruijn
make  -f CMakeFiles/fastaToKmerCoverageStats.dir/build.make CMakeFiles/fastaToKmerCoverageStats.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/Inchworm_build'
cd /<<PKGBUILDDIR>>/Inchworm_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>>/Inchworm /<<PKGBUILDDIR>>/Inchworm /<<PKGBUILDDIR>>/Inchworm_build /<<PKGBUILDDIR>>/Inchworm_build /<<PKGBUILDDIR>>/Inchworm_build/CMakeFiles/fastaToKmerCoverageStats.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Inchworm_build'
make  -f CMakeFiles/fastaToKmerCoverageStats.dir/build.make CMakeFiles/fastaToKmerCoverageStats.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/Inchworm_build'
[ 60%] Building CXX object CMakeFiles/fastaToKmerCoverageStats.dir/src/fastaToKmerCoverageStats.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/fastaToKmerCoverageStats.dir/src/fastaToKmerCoverageStats.cpp.o -MF CMakeFiles/fastaToKmerCoverageStats.dir/src/fastaToKmerCoverageStats.cpp.o.d -o CMakeFiles/fastaToKmerCoverageStats.dir/src/fastaToKmerCoverageStats.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/fastaToKmerCoverageStats.cpp
In file included from /usr/include/c++/14/ext/hash_map:60,
                 from /<<PKGBUILDDIR>>/Inchworm/src/KmerCounter.hpp:53,
                 from /<<PKGBUILDDIR>>/Inchworm/src/IRKE.hpp:7,
                 from /<<PKGBUILDDIR>>/Inchworm/src/fastaToKmerCoverageStats.cpp:20:
/usr/include/c++/14/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp]
   32 | #warning \
      |  ^~~~~~~
[ 64%] Building CXX object CMakeFiles/inchworm.dir/src/stacktrace.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/inchworm.dir/src/stacktrace.cpp.o -MF CMakeFiles/inchworm.dir/src/stacktrace.cpp.o.d -o CMakeFiles/inchworm.dir/src/stacktrace.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/stacktrace.cpp
/<<PKGBUILDDIR>>/Inchworm/src/fastaToKmerCoverageStats.cpp: In function ‘void populate_kmer_counter_from_reads(KmerCounter&, std::string&)’:
/<<PKGBUILDDIR>>/Inchworm/src/fastaToKmerCoverageStats.cpp:231:18: warning: unused variable ‘kmer_length’ [-Wunused-variable]
  231 |     unsigned int kmer_length = kcounter.get_kmer_length();
      |                  ^~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/inchworm.dir/src/argProcessor.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/inchworm.dir/src/argProcessor.cpp.o -MF CMakeFiles/inchworm.dir/src/argProcessor.cpp.o.d -o CMakeFiles/inchworm.dir/src/argProcessor.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/argProcessor.cpp
/<<PKGBUILDDIR>>/Inchworm/src/fastaToKmerCoverageStats.cpp:250:9: warning: ‘end’ may be used uninitialized [-Wmaybe-uninitialized]
  250 | #pragma omp parallel private (myTid)
      |         ^~~
/<<PKGBUILDDIR>>/Inchworm/src/fastaToKmerCoverageStats.cpp:235:26: note: ‘end’ was declared here
  235 |     unsigned long start, end;
      |                          ^~~
[ 71%] Building CXX object CMakeFiles/fastaToKmerCoverageStats.dir/src/argProcessor.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/fastaToKmerCoverageStats.dir/src/argProcessor.cpp.o -MF CMakeFiles/fastaToKmerCoverageStats.dir/src/argProcessor.cpp.o.d -o CMakeFiles/fastaToKmerCoverageStats.dir/src/argProcessor.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/argProcessor.cpp
[ 75%] Linking CXX executable inchworm
/usr/bin/cmake -E cmake_link_script CMakeFiles/inchworm.dir/link.txt --verbose=1
/usr/bin/g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -Wl,-z,relro -Wl,-z,now -lm -ldl  -lrt -rdynamic CMakeFiles/inchworm.dir/src/Fasta_entry.cpp.o CMakeFiles/inchworm.dir/src/IRKE_run.cpp.o CMakeFiles/inchworm.dir/src/sequenceUtil.cpp.o CMakeFiles/inchworm.dir/src/IRKE.cpp.o CMakeFiles/inchworm.dir/src/KmerCounter.cpp.o CMakeFiles/inchworm.dir/src/string_util.cpp.o CMakeFiles/inchworm.dir/src/Fasta_reader.cpp.o CMakeFiles/inchworm.dir/src/stacktrace.cpp.o CMakeFiles/inchworm.dir/src/argProcessor.cpp.o -o inchworm
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Inchworm_build'
[ 75%] Built target inchworm
[ 78%] Building CXX object CMakeFiles/fastaToKmerCoverageStats.dir/src/Fasta_reader.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/fastaToKmerCoverageStats.dir/src/Fasta_reader.cpp.o -MF CMakeFiles/fastaToKmerCoverageStats.dir/src/Fasta_reader.cpp.o.d -o CMakeFiles/fastaToKmerCoverageStats.dir/src/Fasta_reader.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/Fasta_reader.cpp
[ 82%] Building CXX object CMakeFiles/fastaToKmerCoverageStats.dir/src/Fasta_entry.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/fastaToKmerCoverageStats.dir/src/Fasta_entry.cpp.o -MF CMakeFiles/fastaToKmerCoverageStats.dir/src/Fasta_entry.cpp.o.d -o CMakeFiles/fastaToKmerCoverageStats.dir/src/Fasta_entry.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/Fasta_entry.cpp
[ 85%] Building CXX object CMakeFiles/fastaToKmerCoverageStats.dir/src/sequenceUtil.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/fastaToKmerCoverageStats.dir/src/sequenceUtil.cpp.o -MF CMakeFiles/fastaToKmerCoverageStats.dir/src/sequenceUtil.cpp.o.d -o CMakeFiles/fastaToKmerCoverageStats.dir/src/sequenceUtil.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/sequenceUtil.cpp
[ 89%] Building CXX object CMakeFiles/fastaToKmerCoverageStats.dir/src/string_util.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/fastaToKmerCoverageStats.dir/src/string_util.cpp.o -MF CMakeFiles/fastaToKmerCoverageStats.dir/src/string_util.cpp.o.d -o CMakeFiles/fastaToKmerCoverageStats.dir/src/string_util.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/string_util.cpp
[ 92%] Building CXX object CMakeFiles/fastaToKmerCoverageStats.dir/src/stacktrace.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/fastaToKmerCoverageStats.dir/src/stacktrace.cpp.o -MF CMakeFiles/fastaToKmerCoverageStats.dir/src/stacktrace.cpp.o.d -o CMakeFiles/fastaToKmerCoverageStats.dir/src/stacktrace.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/stacktrace.cpp
[ 96%] Building CXX object CMakeFiles/fastaToKmerCoverageStats.dir/src/KmerCounter.cpp.o
/usr/bin/g++   -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -MD -MT CMakeFiles/fastaToKmerCoverageStats.dir/src/KmerCounter.cpp.o -MF CMakeFiles/fastaToKmerCoverageStats.dir/src/KmerCounter.cpp.o.d -o CMakeFiles/fastaToKmerCoverageStats.dir/src/KmerCounter.cpp.o -c /<<PKGBUILDDIR>>/Inchworm/src/KmerCounter.cpp
In file included from /usr/include/c++/14/ext/hash_map:60,
                 from /<<PKGBUILDDIR>>/Inchworm/src/KmerCounter.hpp:53,
                 from /<<PKGBUILDDIR>>/Inchworm/src/KmerCounter.cpp:1:
/usr/include/c++/14/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp]
   32 | #warning \
      |  ^~~~~~~
[100%] Linking CXX executable fastaToKmerCoverageStats
/usr/bin/cmake -E cmake_link_script CMakeFiles/fastaToKmerCoverageStats.dir/link.txt --verbose=1
/usr/bin/g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -Wl,-z,relro -Wl,-z,now -lm -ldl  -lrt -rdynamic CMakeFiles/fastaToKmerCoverageStats.dir/src/fastaToKmerCoverageStats.cpp.o CMakeFiles/fastaToKmerCoverageStats.dir/src/argProcessor.cpp.o CMakeFiles/fastaToKmerCoverageStats.dir/src/Fasta_reader.cpp.o CMakeFiles/fastaToKmerCoverageStats.dir/src/Fasta_entry.cpp.o CMakeFiles/fastaToKmerCoverageStats.dir/src/sequenceUtil.cpp.o CMakeFiles/fastaToKmerCoverageStats.dir/src/string_util.cpp.o CMakeFiles/fastaToKmerCoverageStats.dir/src/stacktrace.cpp.o CMakeFiles/fastaToKmerCoverageStats.dir/src/KmerCounter.cpp.o -o fastaToKmerCoverageStats
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Inchworm_build'
[100%] Built target fastaToKmerCoverageStats
make[3]: Leaving directory '/<<PKGBUILDDIR>>/Inchworm_build'
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make[2]: Leaving directory '/<<PKGBUILDDIR>>/Inchworm_build'
	cd Chrysalis_build && make -j2 "INSTALL=install --strip-program=true" VERBOSE=1
make[2]: Entering directory '/<<PKGBUILDDIR>>/Chrysalis_build'
/usr/bin/cmake -S/<<PKGBUILDDIR>>/Chrysalis -B/<<PKGBUILDDIR>>/Chrysalis_build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/Chrysalis_build/CMakeFiles /<<PKGBUILDDIR>>/Chrysalis_build//CMakeFiles/progress.marks
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make[3]: Entering directory '/<<PKGBUILDDIR>>/Chrysalis_build'
make  -f CMakeFiles/Chrysalis.dir/build.make CMakeFiles/Chrysalis.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/Chrysalis_build'
make  -f CMakeFiles/GraphFromFasta.dir/build.make CMakeFiles/GraphFromFasta.dir/depend
cd /<<PKGBUILDDIR>>/Chrysalis_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>>/Chrysalis /<<PKGBUILDDIR>>/Chrysalis /<<PKGBUILDDIR>>/Chrysalis_build /<<PKGBUILDDIR>>/Chrysalis_build /<<PKGBUILDDIR>>/Chrysalis_build/CMakeFiles/Chrysalis.dir/DependInfo.cmake "--color="
make[4]: Entering directory '/<<PKGBUILDDIR>>/Chrysalis_build'
cd /<<PKGBUILDDIR>>/Chrysalis_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>>/Chrysalis /<<PKGBUILDDIR>>/Chrysalis /<<PKGBUILDDIR>>/Chrysalis_build /<<PKGBUILDDIR>>/Chrysalis_build /<<PKGBUILDDIR>>/Chrysalis_build/CMakeFiles/GraphFromFasta.dir/DependInfo.cmake "--color="
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make  -f CMakeFiles/GraphFromFasta.dir/build.make CMakeFiles/GraphFromFasta.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/Chrysalis_build'
[  1%] Building CXX object CMakeFiles/GraphFromFasta.dir/aligns/KmerAlignCore.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/GraphFromFasta.dir/aligns/KmerAlignCore.cc.o -MF CMakeFiles/GraphFromFasta.dir/aligns/KmerAlignCore.cc.o.d -o CMakeFiles/GraphFromFasta.dir/aligns/KmerAlignCore.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Chrysalis_build'
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make[4]: Entering directory '/<<PKGBUILDDIR>>/Chrysalis_build'
[  2%] Building CXX object CMakeFiles/Chrysalis.dir/aligns/KmerAlignCore.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/Chrysalis.dir/aligns/KmerAlignCore.cc.o -MF CMakeFiles/Chrysalis.dir/aligns/KmerAlignCore.cc.o.d -o CMakeFiles/Chrysalis.dir/aligns/KmerAlignCore.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘void KmerAlignCore::AddData(const vecDNAVector&, const vecNumVector&, int)’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:79:49: warning: unused variable ‘t’ [-Wunused-variable]
   79 |                 KmerAlignCoreRecordStoreTable & t = m_table; // not used?
      |                                                 ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:49:9: warning: unused variable ‘i’ [-Wunused-variable]
   49 |     int i, j, k;
      |         ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘void KmerAlignCore::AddData(const DNAVector&, int, int, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:128:9: warning: unused variable ‘i’ [-Wunused-variable]
  128 |     int i, j, k;
      |         ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:128:12: warning: unused variable ‘j’ [-Wunused-variable]
  128 |     int i, j, k;
      |            ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘void KmerAlignCore::SortAll()’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:148:9: warning: unused variable ‘i’ [-Wunused-variable]
  148 |     int i, j;
      |         ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘const svec<KmerAlignCoreRecord>& KmerAlignCore::GetMatchesDirectly(const DNAVector&, int)’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:158:9: warning: unused variable ‘size’ [-Wunused-variable]
  158 |     int size = m_pTrans->GetSize();
      |         ^~~~
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:159:9: warning: unused variable ‘i’ [-Wunused-variable]
  159 |     int i, j;
      |         ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:159:12: warning: unused variable ‘j’ [-Wunused-variable]
  159 |     int i, j;
      |            ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘void KmerAlignCore::MergeSortFilter(svec<KmerAlignCoreRecord>&, const svec<KmerAlignCoreRecord>&, const svec<KmerAlignCoreRecord>&)’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:291:9: warning: unused variable ‘i’ [-Wunused-variable]
  291 |     int i;
      |         ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘void KmerAlignCore::AddData(const vecDNAVector&, const vecNumVector&, int)’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:79:49: warning: unused variable ‘t’ [-Wunused-variable]
   79 |                 KmerAlignCoreRecordStoreTable & t = m_table; // not used?
      |                                                 ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:49:9: warning: unused variable ‘i’ [-Wunused-variable]
   49 |     int i, j, k;
      |         ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘void KmerAlignCore::AddData(const DNAVector&, int, int, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:128:9: warning: unused variable ‘i’ [-Wunused-variable]
  128 |     int i, j, k;
      |         ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:128:12: warning: unused variable ‘j’ [-Wunused-variable]
  128 |     int i, j, k;
      |            ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘void KmerAlignCore::SortAll()’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:148:9: warning: unused variable ‘i’ [-Wunused-variable]
  148 |     int i, j;
      |         ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘const svec<KmerAlignCoreRecord>& KmerAlignCore::GetMatchesDirectly(const DNAVector&, int)’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:158:9: warning: unused variable ‘size’ [-Wunused-variable]
  158 |     int size = m_pTrans->GetSize();
      |         ^~~~
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:159:9: warning: unused variable ‘i’ [-Wunused-variable]
  159 |     int i, j;
      |         ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:159:12: warning: unused variable ‘j’ [-Wunused-variable]
  159 |     int i, j;
      |            ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘void KmerAlignCore::MergeSortFilter(svec<KmerAlignCoreRecord>&, const svec<KmerAlignCoreRecord>&, const svec<KmerAlignCoreRecord>&)’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:291:9: warning: unused variable ‘i’ [-Wunused-variable]
  291 |     int i;
      |         ^
[  4%] Building CXX object CMakeFiles/Chrysalis.dir/analysis/AACodons.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/Chrysalis.dir/analysis/AACodons.cc.o -MF CMakeFiles/Chrysalis.dir/analysis/AACodons.cc.o.d -o CMakeFiles/Chrysalis.dir/analysis/AACodons.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/AACodons.cc
[  5%] Building CXX object CMakeFiles/GraphFromFasta.dir/analysis/AACodons.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/GraphFromFasta.dir/analysis/AACodons.cc.o -MF CMakeFiles/GraphFromFasta.dir/analysis/AACodons.cc.o.d -o CMakeFiles/GraphFromFasta.dir/analysis/AACodons.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/AACodons.cc
[  7%] Building CXX object CMakeFiles/Chrysalis.dir/analysis/Chrysalis.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/Chrysalis.dir/analysis/Chrysalis.cc.o -MF CMakeFiles/Chrysalis.dir/analysis/Chrysalis.cc.o.d -o CMakeFiles/Chrysalis.dir/analysis/Chrysalis.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/Chrysalis.cc
[  8%] Building CXX object CMakeFiles/GraphFromFasta.dir/analysis/DNAVector.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/GraphFromFasta.dir/analysis/DNAVector.cc.o -MF CMakeFiles/GraphFromFasta.dir/analysis/DNAVector.cc.o.d -o CMakeFiles/GraphFromFasta.dir/analysis/DNAVector.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/DNAVector.cc
/<<PKGBUILDDIR>>/Chrysalis/analysis/Chrysalis.cc: In function ‘int main(int, char**)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/Chrysalis.cc:582:21: warning: unused variable ‘num_iworm_contigs’ [-Wunused-variable]
  582 |                 int num_iworm_contigs = parser.AsInt(2);
      |                     ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/Chrysalis.cc:570:16: warning: unused variable ‘pOut’ [-Wunused-variable]
  570 |         FILE * pOut = NULL;
      |                ^~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/Chrysalis.cc:342:10: warning: unused variable ‘bSkip’ [-Wunused-variable]
  342 |     bool bSkip = P.GetBoolValueFor(skipCmmd);
      |          ^~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/Chrysalis.cc:347:9: warning: unused variable ‘pairDist’ [-Wunused-variable]
  347 |     int pairDist = P.GetIntValueFor(distCmmd);
      |         ^~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/Chrysalis.cc:354:10: warning: variable ‘bBreak’ set but not used [-Wunused-but-set-variable]
  354 |     bool bBreak = true;
      |          ^~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/Chrysalis.cc:359:10: warning: unused variable ‘bButt’ [-Wunused-variable]
  359 |     bool bButt = P.GetBoolValueFor(buttCmmd);
      |          ^~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/Chrysalis.cc:361:10: warning: unused variable ‘max_reads’ [-Wunused-variable]
  361 |     long max_reads = P.GetLongValueFor(maxReadsCmd);
      |          ^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/Chrysalis.cc:372:10: warning: unused variable ‘DEBUG’ [-Wunused-variable]
  372 |     bool DEBUG = P.GetBoolValueFor(debugCmmd);
      |          ^~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/Chrysalis.cc:384:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  384 |     system(command.c_str());
      |     ~~~~~~^~~~~~~~~~~~~~~~~
[ 10%] Building CXX object CMakeFiles/Chrysalis.dir/analysis/DNAVector.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/Chrysalis.dir/analysis/DNAVector.cc.o -MF CMakeFiles/Chrysalis.dir/analysis/DNAVector.cc.o.d -o CMakeFiles/Chrysalis.dir/analysis/DNAVector.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/DNAVector.cc
[ 11%] Building CXX object CMakeFiles/GraphFromFasta.dir/analysis/DeBruijnGraph.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/GraphFromFasta.dir/analysis/DeBruijnGraph.cc.o -MF CMakeFiles/GraphFromFasta.dir/analysis/DeBruijnGraph.cc.o.d -o CMakeFiles/GraphFromFasta.dir/analysis/DeBruijnGraph.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc: In member function ‘void DeBruijnKmer::add_next_kmer(kmer_int_type_t, unsigned int)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc:154:66: warning: unused parameter ‘kmer_length’ [-Wunused-parameter]
  154 | void DeBruijnKmer::add_next_kmer(kmer_int_type_t k, unsigned int kmer_length) {
      |                                                     ~~~~~~~~~~~~~^~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc: In member function ‘std::vector<DeBruijnKmer> DeBruijnGraph::deconvolute_DS_mirror_graph()’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc:355:22: warning: variable ‘rdk’ set but not used [-Wunused-but-set-variable]
  355 |         DeBruijnKmer rdk = _kmer_map.find(rk)->second;
      |                      ^~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc: In member function ‘std::vector<std::__cxx11::basic_string<char> > DeBruijnGraph::get_candidate_weldmers(kmer_int_type_t, int)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc:473:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  473 |     for (int i = 0; i < left_extensions.size(); i++) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc:476:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  476 |         for (int j = 0; j < right_extensions.size(); j++) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc: In member function ‘void DeBruijnGraph::recursively_construct_kmer_extensions(kmer_int_type_t, std::vector<char>&, std::vector<std::__cxx11::basic_string<char> >&, char, std::map<long long unsigned int, bool>&, int)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc:513:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  513 |     for (int i = 0; i < adjacent_kmers.size(); i++) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc:527:41: warning: comparison of integer expressions of different signedness: ‘std::vector<char>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  527 |         if (kmer_extension_chars.size() == flank_extension_length) {
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/GraphFromFasta.dir/analysis/GraphFromFasta.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/GraphFromFasta.dir/analysis/GraphFromFasta.cc.o -MF CMakeFiles/GraphFromFasta.dir/analysis/GraphFromFasta.cc.o.d -o CMakeFiles/GraphFromFasta.dir/analysis/GraphFromFasta.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc: In function ‘bool SimpleHalves(const DNAVector&)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc:272:15: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  271 |             ( (! DISABLE_REPEAT_CHECK)
      |               ~~~~~~~~~~~~~~~~~~~~~~~~
  272 |               &&
      |               ^~
  273 |               is_simple_repeat(left) || is_simple_repeat(right) )
      |               ~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc: In function ‘float align_get_per_id(const DNAVector&, const DNAVector&, int, int, int)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc:351:94: warning: unused parameter ‘k’ [-Wunused-parameter]
  351 | float align_get_per_id(const DNAVector & a, const DNAVector & b, int startA, int startB, int k)
      |                                                                                          ~~~~^
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc: In member function ‘bool Welder::Weldable(const DNAVector&, int, const DNAVector&, int, int, std::string&, unsigned int&)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc:523:13: warning: unused variable ‘i’ [-Wunused-variable]
  523 |         int i;
      |             ^
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc: In function ‘void report_iworm_graph(std::map<int, Pool>&, std::map<int, bool>&, std::map<int, int>&)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc:713:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  713 |             for (int j = 0; j < adjacent_nodes.size(); j++) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc: In function ‘svec<Pool> sl_cluster_pools(std::map<int, Pool>&, std::map<int, bool>&)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc:847:40: warning: implicitly-declared ‘Pool& Pool::operator=(const Pool&)’ is deprecated [-Wdeprecated-copy]
  847 |                 pool_vec[oldpool_id] = tmp;
      |                                        ^~~
In file included from /<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc:19:
/<<PKGBUILDDIR>>/Chrysalis/analysis/Pool.h:24:5: note: because ‘Pool’ has user-provided ‘Pool::Pool(const Pool&)’
   24 |     Pool(const Pool& p) {
      |     ^~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc: In function ‘void add_scaffolds_to_clusters(std::map<int, Pool>&, std::string, vecDNAVector&, int, float)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc:961:33: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  961 |             if (pair_link_count >= minCov) {
      |                 ~~~~~~~~~~~~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc: In function ‘void add_iworm_link(std::map<int, Pool>&, int, int)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc:1006:55: warning: implicitly-declared ‘Pool& Pool::operator=(const Pool&)’ is deprecated [-Wdeprecated-copy]
 1006 |         weld_reinforced_iworm_clusters[iworm_index] = p;
      |                                                       ^
/<<PKGBUILDDIR>>/Chrysalis/analysis/Pool.h:24:5: note: because ‘Pool’ has user-provided ‘Pool::Pool(const Pool&)’
   24 |     Pool(const Pool& p) {
      |     ^~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc: In function ‘int main(int, char**)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc:1310:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1310 |         for (i=0; i<dna.size(); i++) {
      |                   ~^~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc:1316:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1316 |             if (iworm_counter % 1000 == 0 || iworm_counter == dna.size()-1) {
      |                                              ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc:1442:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1442 |     for (i=0; i<dna.size(); i++) {
      |               ~^~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc:1454:13: warning: unused variable ‘cutoff’ [-Wunused-variable]
 1454 |         int cutoff = 0;
      |             ^~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/GraphFromFasta.cc:1268:9: warning: unused variable ‘total_iworm_contigs’ [-Wunused-variable]
 1268 |     int total_iworm_contigs = dna.size();
      |         ^~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/Chrysalis.dir/analysis/TranscriptomeGraph.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/Chrysalis.dir/analysis/TranscriptomeGraph.cc.o -MF CMakeFiles/Chrysalis.dir/analysis/TranscriptomeGraph.cc.o.d -o CMakeFiles/Chrysalis.dir/analysis/TranscriptomeGraph.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/TranscriptomeGraph.cc
/<<PKGBUILDDIR>>/Chrysalis/analysis/TranscriptomeGraph.cc: In member function ‘void KmerSequence::Setup()’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/TranscriptomeGraph.cc:177:19: warning: unused variable ‘i’ [-Wunused-variable]
  177 |         long long i;
      |                   ^
/<<PKGBUILDDIR>>/Chrysalis/analysis/TranscriptomeGraph.cc: In member function ‘void KmerSearch::Extend(long long int, DNAVector&, const svec<long long int>&, DNAVector&)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/TranscriptomeGraph.cc:547:16: warning: unused variable ‘plusminus’ [-Wunused-variable]
  547 |     static int plusminus = 0;
      |                ^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/TranscriptomeGraph.cc: In function ‘int TranscriptomeGraph(vecDNAVector&, FILE*, int, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/TranscriptomeGraph.cc:668:20: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  668 |         for (i=0; i<=d.isize()-k; i++) {
      |                   ~^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/TranscriptomeGraph.cc:647:10: warning: unused variable ‘bAppend’ [-Wunused-variable]
  647 |     bool bAppend = true;
      |          ^~~~~~~
[ 15%] Building CXX object CMakeFiles/Chrysalis.dir/base/ErrorHandling.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/Chrysalis.dir/base/ErrorHandling.cc.o -MF CMakeFiles/Chrysalis.dir/base/ErrorHandling.cc.o.d -o CMakeFiles/Chrysalis.dir/base/ErrorHandling.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc: In function ‘void print_trace(FILE*, const char*, int)’:
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc:7:24: warning: unused parameter ‘out’ [-Wunused-parameter]
    7 | void print_trace(FILE *out, const char *file, int line)
      |                  ~~~~~~^~~
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc:7:41: warning: unused parameter ‘file’ [-Wunused-parameter]
    7 | void print_trace(FILE *out, const char *file, int line)
      |                             ~~~~~~~~~~~~^~~~
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc:7:51: warning: unused parameter ‘line’ [-Wunused-parameter]
    7 | void print_trace(FILE *out, const char *file, int line)
      |                                               ~~~~^~~~
[ 17%] Building CXX object CMakeFiles/Chrysalis.dir/base/FileParser.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/Chrysalis.dir/base/FileParser.cc.o -MF CMakeFiles/Chrysalis.dir/base/FileParser.cc.o.d -o CMakeFiles/Chrysalis.dir/base/FileParser.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/base/FileParser.cc
[ 18%] Building CXX object CMakeFiles/GraphFromFasta.dir/analysis/KmerTable.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/GraphFromFasta.dir/analysis/KmerTable.cc.o -MF CMakeFiles/GraphFromFasta.dir/analysis/KmerTable.cc.o.d -o CMakeFiles/GraphFromFasta.dir/analysis/KmerTable.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/KmerTable.cc
/<<PKGBUILDDIR>>/Chrysalis/base/FileParser.cc: In member function ‘bool StringParser::IsString(int)’:
/<<PKGBUILDDIR>>/Chrysalis/base/FileParser.cc:50:33: warning: unused parameter ‘index’ [-Wunused-parameter]
   50 | bool StringParser::IsString(int index)
      |                             ~~~~^~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/KmerTable.cc: In member function ‘long long int KmerSequence::BasesToNumber(const DNAVector&, int)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/KmerTable.cc:27:13: warning: unused variable ‘i’ [-Wunused-variable]
   27 |   long long i;
      |             ^
[ 20%] Building CXX object CMakeFiles/Chrysalis.dir/base/StringUtil.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/Chrysalis.dir/base/StringUtil.cc.o -MF CMakeFiles/Chrysalis.dir/base/StringUtil.cc.o.d -o CMakeFiles/Chrysalis.dir/base/StringUtil.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/base/StringUtil.cc
[ 21%] Building CXX object CMakeFiles/GraphFromFasta.dir/analysis/NonRedKmerTable.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/GraphFromFasta.dir/analysis/NonRedKmerTable.cc.o -MF CMakeFiles/GraphFromFasta.dir/analysis/NonRedKmerTable.cc.o.d -o CMakeFiles/GraphFromFasta.dir/analysis/NonRedKmerTable.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc
[ 22%] Building CXX object CMakeFiles/Chrysalis.dir/util/mutil.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/Chrysalis.dir/util/mutil.cc.o -MF CMakeFiles/Chrysalis.dir/util/mutil.cc.o.d -o CMakeFiles/Chrysalis.dir/util/mutil.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc: In member function ‘void NonRedKmerTable::SetUp(const vecDNAVector&, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:46:20: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   46 |         for (j=0; j<=d.size()-m_k; j++) {
      |                   ~^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:56:20: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   56 |         for (j=0; j<=d.size()-m_k; j++) {
      |                   ~^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:79:18: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   79 |       for (j=0; j<=d.size()-m_k; j++) {
      |                 ~^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc: In member function ‘void NonRedKmerTable::AddData(const vecDNAVector&)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:109:16: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  109 |     for (j=0; j<= d.isize()-m_k; j++) {
      |               ~^~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc: In member function ‘void NonRedKmerTable::AddData(vecDNAVectorStream&)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:125:9: warning: unused variable ‘i’ [-Wunused-variable]
  125 |     int i, j;
      |         ^
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiReadFileStream::ReadSimpleType(void*, long int)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:313:14: warning: passing argument 1 to ‘restrict’-qualified parameter aliases with argument 4 [-Wrestrict]
  313 |   if (fscanf(m_pFile, szText, sizeof(szText), m_pFile) == EOF) {
      |              ^~~~~~~                          ~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:303:51: warning: unused parameter ‘pData’ [-Wunused-parameter]
  303 | bool CMAsciiReadFileStream::ReadSimpleType(void * pData, long lenInBytes)
      |                                            ~~~~~~~^~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:303:63: warning: unused parameter ‘lenInBytes’ [-Wunused-parameter]
  303 | bool CMAsciiReadFileStream::ReadSimpleType(void * pData, long lenInBytes)
      |                                                          ~~~~~^~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiReadFileStream::ReadString(CMString&)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:436:14: warning: passing argument 1 to ‘restrict’-qualified parameter aliases with argument 4 [-Wrestrict]
  436 |   if (fscanf(m_pFile, pData, len, m_pFile) == EOF) {
      |              ^~~~~~~              ~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiWriteFileStream::WriteBlob(const void*, long int, long int)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:526:53: warning: unused parameter ‘pData’ [-Wunused-parameter]
  526 | bool CMAsciiWriteFileStream::WriteBlob(const void * pData, long lenInElements, long elSize)
      |                                        ~~~~~~~~~~~~~^~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:526:65: warning: unused parameter ‘lenInElements’ [-Wunused-parameter]
  526 | bool CMAsciiWriteFileStream::WriteBlob(const void * pData, long lenInElements, long elSize)
      |                                                            ~~~~~^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:526:85: warning: unused parameter ‘elSize’ [-Wunused-parameter]
  526 | bool CMAsciiWriteFileStream::WriteBlob(const void * pData, long lenInElements, long elSize)
      |                                                                                ~~~~~^~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MLog(const MCL_TCHAR*, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:738:53: warning: unused parameter ‘bLineFeed’ [-Wunused-parameter]
  738 | MDLLEXPORT void MLog(const MCL_TCHAR * szText, bool bLineFeed)
      |                                                ~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MLog(const MCL_TCHAR*, long int, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:761:63: warning: unused parameter ‘bLineFeed’ [-Wunused-parameter]
  761 | MDLLEXPORT void MLog(const MCL_TCHAR * szText, long val, bool bLineFeed)
      |                                                          ~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MLog(const MCL_TCHAR*, const MCL_TCHAR*, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:787:80: warning: unused parameter ‘bLineFeed’ [-Wunused-parameter]
  787 | MDLLEXPORT void MLog(const MCL_TCHAR * szText, const MCL_TCHAR * szText2, bool bLineFeed)
      |                                                                           ~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MCLSetUTF8Encode(bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:1288:39: warning: unused parameter ‘b’ [-Wunused-parameter]
 1288 | MDLLEXPORT void MCLSetUTF8Encode(bool b)
      |                                  ~~~~~^
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘bool AddUTF8Sig(CMString&)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:1688:16: warning: unused variable ‘p’ [-Wunused-variable]
 1688 |   const char * p = (const char*)string;
      |                ^
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiReadFileStream::ReadSimpleType(void*, long int)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:313:13: warning: ‘szText’ may be used uninitialized [-Wmaybe-uninitialized]
  313 |   if (fscanf(m_pFile, szText, sizeof(szText), m_pFile) == EOF) {
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/features.h:502,
                 from /usr/include/x86_64-linux-gnu/bits/libc-header-start.h:33,
                 from /usr/include/string.h:26,
                 from /<<PKGBUILDDIR>>/Chrysalis/util/mutil.h:19,
                 from /<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:9:
/usr/include/stdio.h:442:12: note: by argument 2 of type ‘const char*’ to ‘int fscanf(FILE*, const char*, ...)’ declared here
  442 | extern int __REDIRECT (fscanf, (FILE *__restrict __stream,
      |            ^~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:311:8: note: ‘szText’ declared here
  311 |   char szText[2048 * 10];
      |        ^~~~~~
[ 24%] Building CXX object CMakeFiles/GraphFromFasta.dir/analysis/sequenceUtil.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/GraphFromFasta.dir/analysis/sequenceUtil.cc.o -MF CMakeFiles/GraphFromFasta.dir/analysis/sequenceUtil.cc.o.d -o CMakeFiles/GraphFromFasta.dir/analysis/sequenceUtil.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc
[ 25%] Linking CXX executable Chrysalis
/usr/bin/cmake -E cmake_link_script CMakeFiles/Chrysalis.dir/link.txt --verbose=1
/usr/bin/g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -lm -ldl  -lrt -rdynamic CMakeFiles/Chrysalis.dir/aligns/KmerAlignCore.cc.o CMakeFiles/Chrysalis.dir/analysis/AACodons.cc.o CMakeFiles/Chrysalis.dir/analysis/Chrysalis.cc.o CMakeFiles/Chrysalis.dir/analysis/DNAVector.cc.o CMakeFiles/Chrysalis.dir/analysis/TranscriptomeGraph.cc.o CMakeFiles/Chrysalis.dir/base/ErrorHandling.cc.o CMakeFiles/Chrysalis.dir/base/FileParser.cc.o CMakeFiles/Chrysalis.dir/base/StringUtil.cc.o CMakeFiles/Chrysalis.dir/util/mutil.cc.o -o Chrysalis
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Chrysalis_build'
[ 25%] Built target Chrysalis
/<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc: In function ‘bool contains_non_gatc(std::string)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc:33:26: warning: array subscript has type ‘char’ [-Wchar-subscripts]
   33 |         if (_base_to_int[c] > 3)
      |                          ^
/<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc: In function ‘kmer_int_type_t kmer_to_intval(std::string)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc:264:32: warning: array subscript has type ‘char’ [-Wchar-subscripts]
  264 |         int val = _base_to_int[c];
      |                                ^
[ 27%] Building CXX object CMakeFiles/GraphFromFasta.dir/analysis/stacktrace.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/GraphFromFasta.dir/analysis/stacktrace.cc.o -MF CMakeFiles/GraphFromFasta.dir/analysis/stacktrace.cc.o.d -o CMakeFiles/GraphFromFasta.dir/analysis/stacktrace.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/stacktrace.cc
make  -f CMakeFiles/QuantifyGraph.dir/build.make CMakeFiles/QuantifyGraph.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/Chrysalis_build'
cd /<<PKGBUILDDIR>>/Chrysalis_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>>/Chrysalis /<<PKGBUILDDIR>>/Chrysalis /<<PKGBUILDDIR>>/Chrysalis_build /<<PKGBUILDDIR>>/Chrysalis_build /<<PKGBUILDDIR>>/Chrysalis_build/CMakeFiles/QuantifyGraph.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Chrysalis_build'
make  -f CMakeFiles/QuantifyGraph.dir/build.make CMakeFiles/QuantifyGraph.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/Chrysalis_build'
[ 28%] Building CXX object CMakeFiles/QuantifyGraph.dir/aligns/KmerAlignCore.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/QuantifyGraph.dir/aligns/KmerAlignCore.cc.o -MF CMakeFiles/QuantifyGraph.dir/aligns/KmerAlignCore.cc.o.d -o CMakeFiles/QuantifyGraph.dir/aligns/KmerAlignCore.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc
[ 30%] Building CXX object CMakeFiles/GraphFromFasta.dir/base/ErrorHandling.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/GraphFromFasta.dir/base/ErrorHandling.cc.o -MF CMakeFiles/GraphFromFasta.dir/base/ErrorHandling.cc.o.d -o CMakeFiles/GraphFromFasta.dir/base/ErrorHandling.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘void KmerAlignCore::AddData(const vecDNAVector&, const vecNumVector&, int)’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:79:49: warning: unused variable ‘t’ [-Wunused-variable]
   79 |                 KmerAlignCoreRecordStoreTable & t = m_table; // not used?
      |                                                 ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:49:9: warning: unused variable ‘i’ [-Wunused-variable]
   49 |     int i, j, k;
      |         ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘void KmerAlignCore::AddData(const DNAVector&, int, int, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:128:9: warning: unused variable ‘i’ [-Wunused-variable]
  128 |     int i, j, k;
      |         ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:128:12: warning: unused variable ‘j’ [-Wunused-variable]
  128 |     int i, j, k;
      |            ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘void KmerAlignCore::SortAll()’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:148:9: warning: unused variable ‘i’ [-Wunused-variable]
  148 |     int i, j;
      |         ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘const svec<KmerAlignCoreRecord>& KmerAlignCore::GetMatchesDirectly(const DNAVector&, int)’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:158:9: warning: unused variable ‘size’ [-Wunused-variable]
  158 |     int size = m_pTrans->GetSize();
      |         ^~~~
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:159:9: warning: unused variable ‘i’ [-Wunused-variable]
  159 |     int i, j;
      |         ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:159:12: warning: unused variable ‘j’ [-Wunused-variable]
  159 |     int i, j;
      |            ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘void KmerAlignCore::MergeSortFilter(svec<KmerAlignCoreRecord>&, const svec<KmerAlignCoreRecord>&, const svec<KmerAlignCoreRecord>&)’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:291:9: warning: unused variable ‘i’ [-Wunused-variable]
  291 |     int i;
      |         ^
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc: In function ‘void print_trace(FILE*, const char*, int)’:
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc:7:24: warning: unused parameter ‘out’ [-Wunused-parameter]
    7 | void print_trace(FILE *out, const char *file, int line)
      |                  ~~~~~~^~~
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc:7:41: warning: unused parameter ‘file’ [-Wunused-parameter]
    7 | void print_trace(FILE *out, const char *file, int line)
      |                             ~~~~~~~~~~~~^~~~
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc:7:51: warning: unused parameter ‘line’ [-Wunused-parameter]
    7 | void print_trace(FILE *out, const char *file, int line)
      |                                               ~~~~^~~~
[ 31%] Building CXX object CMakeFiles/GraphFromFasta.dir/base/FileParser.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/GraphFromFasta.dir/base/FileParser.cc.o -MF CMakeFiles/GraphFromFasta.dir/base/FileParser.cc.o.d -o CMakeFiles/GraphFromFasta.dir/base/FileParser.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/base/FileParser.cc
/<<PKGBUILDDIR>>/Chrysalis/base/FileParser.cc: In member function ‘bool StringParser::IsString(int)’:
/<<PKGBUILDDIR>>/Chrysalis/base/FileParser.cc:50:33: warning: unused parameter ‘index’ [-Wunused-parameter]
   50 | bool StringParser::IsString(int index)
      |                             ~~~~^~~~~
[ 32%] Building CXX object CMakeFiles/QuantifyGraph.dir/analysis/AACodons.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/QuantifyGraph.dir/analysis/AACodons.cc.o -MF CMakeFiles/QuantifyGraph.dir/analysis/AACodons.cc.o.d -o CMakeFiles/QuantifyGraph.dir/analysis/AACodons.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/AACodons.cc
[ 34%] Building CXX object CMakeFiles/GraphFromFasta.dir/base/StringUtil.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/GraphFromFasta.dir/base/StringUtil.cc.o -MF CMakeFiles/GraphFromFasta.dir/base/StringUtil.cc.o.d -o CMakeFiles/GraphFromFasta.dir/base/StringUtil.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/base/StringUtil.cc
[ 35%] Building CXX object CMakeFiles/GraphFromFasta.dir/util/mutil.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/GraphFromFasta.dir/util/mutil.cc.o -MF CMakeFiles/GraphFromFasta.dir/util/mutil.cc.o.d -o CMakeFiles/GraphFromFasta.dir/util/mutil.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiReadFileStream::ReadSimpleType(void*, long int)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:313:14: warning: passing argument 1 to ‘restrict’-qualified parameter aliases with argument 4 [-Wrestrict]
  313 |   if (fscanf(m_pFile, szText, sizeof(szText), m_pFile) == EOF) {
      |              ^~~~~~~                          ~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:303:51: warning: unused parameter ‘pData’ [-Wunused-parameter]
  303 | bool CMAsciiReadFileStream::ReadSimpleType(void * pData, long lenInBytes)
      |                                            ~~~~~~~^~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:303:63: warning: unused parameter ‘lenInBytes’ [-Wunused-parameter]
  303 | bool CMAsciiReadFileStream::ReadSimpleType(void * pData, long lenInBytes)
      |                                                          ~~~~~^~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiReadFileStream::ReadString(CMString&)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:436:14: warning: passing argument 1 to ‘restrict’-qualified parameter aliases with argument 4 [-Wrestrict]
  436 |   if (fscanf(m_pFile, pData, len, m_pFile) == EOF) {
      |              ^~~~~~~              ~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiWriteFileStream::WriteBlob(const void*, long int, long int)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:526:53: warning: unused parameter ‘pData’ [-Wunused-parameter]
  526 | bool CMAsciiWriteFileStream::WriteBlob(const void * pData, long lenInElements, long elSize)
      |                                        ~~~~~~~~~~~~~^~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:526:65: warning: unused parameter ‘lenInElements’ [-Wunused-parameter]
  526 | bool CMAsciiWriteFileStream::WriteBlob(const void * pData, long lenInElements, long elSize)
      |                                                            ~~~~~^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:526:85: warning: unused parameter ‘elSize’ [-Wunused-parameter]
  526 | bool CMAsciiWriteFileStream::WriteBlob(const void * pData, long lenInElements, long elSize)
      |                                                                                ~~~~~^~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MLog(const MCL_TCHAR*, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:738:53: warning: unused parameter ‘bLineFeed’ [-Wunused-parameter]
  738 | MDLLEXPORT void MLog(const MCL_TCHAR * szText, bool bLineFeed)
      |                                                ~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MLog(const MCL_TCHAR*, long int, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:761:63: warning: unused parameter ‘bLineFeed’ [-Wunused-parameter]
  761 | MDLLEXPORT void MLog(const MCL_TCHAR * szText, long val, bool bLineFeed)
      |                                                          ~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MLog(const MCL_TCHAR*, const MCL_TCHAR*, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:787:80: warning: unused parameter ‘bLineFeed’ [-Wunused-parameter]
  787 | MDLLEXPORT void MLog(const MCL_TCHAR * szText, const MCL_TCHAR * szText2, bool bLineFeed)
      |                                                                           ~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MCLSetUTF8Encode(bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:1288:39: warning: unused parameter ‘b’ [-Wunused-parameter]
 1288 | MDLLEXPORT void MCLSetUTF8Encode(bool b)
      |                                  ~~~~~^
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘bool AddUTF8Sig(CMString&)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:1688:16: warning: unused variable ‘p’ [-Wunused-variable]
 1688 |   const char * p = (const char*)string;
      |                ^
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiReadFileStream::ReadSimpleType(void*, long int)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:313:13: warning: ‘szText’ may be used uninitialized [-Wmaybe-uninitialized]
  313 |   if (fscanf(m_pFile, szText, sizeof(szText), m_pFile) == EOF) {
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/features.h:502,
                 from /usr/include/x86_64-linux-gnu/bits/libc-header-start.h:33,
                 from /usr/include/string.h:26,
                 from /<<PKGBUILDDIR>>/Chrysalis/util/mutil.h:19,
                 from /<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:9:
/usr/include/stdio.h:442:12: note: by argument 2 of type ‘const char*’ to ‘int fscanf(FILE*, const char*, ...)’ declared here
  442 | extern int __REDIRECT (fscanf, (FILE *__restrict __stream,
      |            ^~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:311:8: note: ‘szText’ declared here
  311 |   char szText[2048 * 10];
      |        ^~~~~~
[ 37%] Building CXX object CMakeFiles/QuantifyGraph.dir/analysis/DNAVector.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/QuantifyGraph.dir/analysis/DNAVector.cc.o -MF CMakeFiles/QuantifyGraph.dir/analysis/DNAVector.cc.o.d -o CMakeFiles/QuantifyGraph.dir/analysis/DNAVector.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/DNAVector.cc
[ 38%] Linking CXX executable GraphFromFasta
/usr/bin/cmake -E cmake_link_script CMakeFiles/GraphFromFasta.dir/link.txt --verbose=1
/usr/bin/g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -lm -ldl  -lrt -rdynamic CMakeFiles/GraphFromFasta.dir/aligns/KmerAlignCore.cc.o CMakeFiles/GraphFromFasta.dir/analysis/AACodons.cc.o CMakeFiles/GraphFromFasta.dir/analysis/DNAVector.cc.o CMakeFiles/GraphFromFasta.dir/analysis/DeBruijnGraph.cc.o CMakeFiles/GraphFromFasta.dir/analysis/GraphFromFasta.cc.o CMakeFiles/GraphFromFasta.dir/analysis/KmerTable.cc.o CMakeFiles/GraphFromFasta.dir/analysis/NonRedKmerTable.cc.o CMakeFiles/GraphFromFasta.dir/analysis/sequenceUtil.cc.o CMakeFiles/GraphFromFasta.dir/analysis/stacktrace.cc.o CMakeFiles/GraphFromFasta.dir/base/ErrorHandling.cc.o CMakeFiles/GraphFromFasta.dir/base/FileParser.cc.o CMakeFiles/GraphFromFasta.dir/base/StringUtil.cc.o CMakeFiles/GraphFromFasta.dir/util/mutil.cc.o -o GraphFromFasta
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Chrysalis_build'
[ 38%] Built target GraphFromFasta
make  -f CMakeFiles/ReadsToTranscripts.dir/build.make CMakeFiles/ReadsToTranscripts.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/Chrysalis_build'
cd /<<PKGBUILDDIR>>/Chrysalis_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>>/Chrysalis /<<PKGBUILDDIR>>/Chrysalis /<<PKGBUILDDIR>>/Chrysalis_build /<<PKGBUILDDIR>>/Chrysalis_build /<<PKGBUILDDIR>>/Chrysalis_build/CMakeFiles/ReadsToTranscripts.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Chrysalis_build'
make  -f CMakeFiles/ReadsToTranscripts.dir/build.make CMakeFiles/ReadsToTranscripts.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/Chrysalis_build'
[ 40%] Building CXX object CMakeFiles/ReadsToTranscripts.dir/analysis/AACodons.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/ReadsToTranscripts.dir/analysis/AACodons.cc.o -MF CMakeFiles/ReadsToTranscripts.dir/analysis/AACodons.cc.o.d -o CMakeFiles/ReadsToTranscripts.dir/analysis/AACodons.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/AACodons.cc
[ 41%] Building CXX object CMakeFiles/ReadsToTranscripts.dir/analysis/DNAVector.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/ReadsToTranscripts.dir/analysis/DNAVector.cc.o -MF CMakeFiles/ReadsToTranscripts.dir/analysis/DNAVector.cc.o.d -o CMakeFiles/ReadsToTranscripts.dir/analysis/DNAVector.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/DNAVector.cc
[ 42%] Building CXX object CMakeFiles/QuantifyGraph.dir/analysis/KmerTable.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/QuantifyGraph.dir/analysis/KmerTable.cc.o -MF CMakeFiles/QuantifyGraph.dir/analysis/KmerTable.cc.o.d -o CMakeFiles/QuantifyGraph.dir/analysis/KmerTable.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/KmerTable.cc
/<<PKGBUILDDIR>>/Chrysalis/analysis/KmerTable.cc: In member function ‘long long int KmerSequence::BasesToNumber(const DNAVector&, int)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/KmerTable.cc:27:13: warning: unused variable ‘i’ [-Wunused-variable]
   27 |   long long i;
      |             ^
[ 44%] Building CXX object CMakeFiles/QuantifyGraph.dir/analysis/NonRedKmerTable.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/QuantifyGraph.dir/analysis/NonRedKmerTable.cc.o -MF CMakeFiles/QuantifyGraph.dir/analysis/NonRedKmerTable.cc.o.d -o CMakeFiles/QuantifyGraph.dir/analysis/NonRedKmerTable.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc: In member function ‘void NonRedKmerTable::SetUp(const vecDNAVector&, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:46:20: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   46 |         for (j=0; j<=d.size()-m_k; j++) {
      |                   ~^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:56:20: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   56 |         for (j=0; j<=d.size()-m_k; j++) {
      |                   ~^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:79:18: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   79 |       for (j=0; j<=d.size()-m_k; j++) {
      |                 ~^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc: In member function ‘void NonRedKmerTable::AddData(const vecDNAVector&)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:109:16: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  109 |     for (j=0; j<= d.isize()-m_k; j++) {
      |               ~^~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc: In member function ‘void NonRedKmerTable::AddData(vecDNAVectorStream&)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:125:9: warning: unused variable ‘i’ [-Wunused-variable]
  125 |     int i, j;
      |         ^
[ 45%] Building CXX object CMakeFiles/QuantifyGraph.dir/analysis/QuantifyGraph.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/QuantifyGraph.dir/analysis/QuantifyGraph.cc.o -MF CMakeFiles/QuantifyGraph.dir/analysis/QuantifyGraph.cc.o.d -o CMakeFiles/QuantifyGraph.dir/analysis/QuantifyGraph.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/QuantifyGraph.cc
[ 47%] Building CXX object CMakeFiles/ReadsToTranscripts.dir/analysis/NonRedKmerTable.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/ReadsToTranscripts.dir/analysis/NonRedKmerTable.cc.o -MF CMakeFiles/ReadsToTranscripts.dir/analysis/NonRedKmerTable.cc.o.d -o CMakeFiles/ReadsToTranscripts.dir/analysis/NonRedKmerTable.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc
/<<PKGBUILDDIR>>/Chrysalis/analysis/QuantifyGraph.cc: In function ‘long long int BasesToNumberCountPlus(const std::vector<KmerEntry, std::allocator<KmerEntry> >&, svec<IDS>&, long long int&, const DNAVector&, int, const vecDNAVector&, int)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/QuantifyGraph.cc:250:10: warning: ISO C++ forbids variable length array ‘kmerseq’ [-Wvla]
  250 |     char kmerseq [kmer_length + 1];
      |          ^~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/QuantifyGraph.cc: In function ‘int main(int, char**)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/QuantifyGraph.cc:372:29: warning: unused variable ‘prevNode’ [-Wunused-variable]
  372 |                         int prevNode = parser.AsInt(1);
      |                             ^~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/QuantifyGraph.cc:409:13: warning: unused variable ‘node’ [-Wunused-variable]
  409 |         int node = parser.AsInt(0);
      |             ^~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/QuantifyGraph.cc:412:30: warning: unused variable ‘p2’ [-Wunused-variable]
  412 |                 const char * p2 = s.c_str();
      |                              ^~
/<<PKGBUILDDIR>>/Chrysalis/analysis/QuantifyGraph.cc:337:16: warning: unused variable ‘j’ [-Wunused-variable]
  337 |         int i, j;
      |                ^
/<<PKGBUILDDIR>>/Chrysalis/analysis/QuantifyGraph.cc:350:16: warning: unused variable ‘m’ [-Wunused-variable]
  350 |         size_t m = kmers.size();
      |                ^
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc: In member function ‘void NonRedKmerTable::SetUp(const vecDNAVector&, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:46:20: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   46 |         for (j=0; j<=d.size()-m_k; j++) {
      |                   ~^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:56:20: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   56 |         for (j=0; j<=d.size()-m_k; j++) {
      |                   ~^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:79:18: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   79 |       for (j=0; j<=d.size()-m_k; j++) {
      |                 ~^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc: In member function ‘void NonRedKmerTable::AddData(const vecDNAVector&)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:109:16: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  109 |     for (j=0; j<= d.isize()-m_k; j++) {
      |               ~^~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc: In member function ‘void NonRedKmerTable::AddData(vecDNAVectorStream&)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:125:9: warning: unused variable ‘i’ [-Wunused-variable]
  125 |     int i, j;
      |         ^
[ 48%] Building CXX object CMakeFiles/ReadsToTranscripts.dir/analysis/ReadsToTranscripts.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/ReadsToTranscripts.dir/analysis/ReadsToTranscripts.cc.o -MF CMakeFiles/ReadsToTranscripts.dir/analysis/ReadsToTranscripts.cc.o.d -o CMakeFiles/ReadsToTranscripts.dir/analysis/ReadsToTranscripts.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/ReadsToTranscripts.cc
[ 50%] Building CXX object CMakeFiles/QuantifyGraph.dir/base/ErrorHandling.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/QuantifyGraph.dir/base/ErrorHandling.cc.o -MF CMakeFiles/QuantifyGraph.dir/base/ErrorHandling.cc.o.d -o CMakeFiles/QuantifyGraph.dir/base/ErrorHandling.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc: In function ‘void print_trace(FILE*, const char*, int)’:
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc:7:24: warning: unused parameter ‘out’ [-Wunused-parameter]
    7 | void print_trace(FILE *out, const char *file, int line)
      |                  ~~~~~~^~~
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc:7:41: warning: unused parameter ‘file’ [-Wunused-parameter]
    7 | void print_trace(FILE *out, const char *file, int line)
      |                             ~~~~~~~~~~~~^~~~
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc:7:51: warning: unused parameter ‘line’ [-Wunused-parameter]
    7 | void print_trace(FILE *out, const char *file, int line)
      |                                               ~~~~^~~~
[ 51%] Building CXX object CMakeFiles/QuantifyGraph.dir/base/FileParser.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/QuantifyGraph.dir/base/FileParser.cc.o -MF CMakeFiles/QuantifyGraph.dir/base/FileParser.cc.o.d -o CMakeFiles/QuantifyGraph.dir/base/FileParser.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/base/FileParser.cc
/<<PKGBUILDDIR>>/Chrysalis/base/FileParser.cc: In member function ‘bool StringParser::IsString(int)’:
/<<PKGBUILDDIR>>/Chrysalis/base/FileParser.cc:50:33: warning: unused parameter ‘index’ [-Wunused-parameter]
   50 | bool StringParser::IsString(int index)
      |                             ~~~~^~~~~
[ 52%] Building CXX object CMakeFiles/ReadsToTranscripts.dir/analysis/sequenceUtil.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/ReadsToTranscripts.dir/analysis/sequenceUtil.cc.o -MF CMakeFiles/ReadsToTranscripts.dir/analysis/sequenceUtil.cc.o.d -o CMakeFiles/ReadsToTranscripts.dir/analysis/sequenceUtil.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc
[ 54%] Building CXX object CMakeFiles/QuantifyGraph.dir/base/StringUtil.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/QuantifyGraph.dir/base/StringUtil.cc.o -MF CMakeFiles/QuantifyGraph.dir/base/StringUtil.cc.o.d -o CMakeFiles/QuantifyGraph.dir/base/StringUtil.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/base/StringUtil.cc
/<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc: In function ‘bool contains_non_gatc(std::string)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc:33:26: warning: array subscript has type ‘char’ [-Wchar-subscripts]
   33 |         if (_base_to_int[c] > 3)
      |                          ^
/<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc: In function ‘kmer_int_type_t kmer_to_intval(std::string)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc:264:32: warning: array subscript has type ‘char’ [-Wchar-subscripts]
  264 |         int val = _base_to_int[c];
      |                                ^
[ 55%] Building CXX object CMakeFiles/QuantifyGraph.dir/analysis/sequenceUtil.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/QuantifyGraph.dir/analysis/sequenceUtil.cc.o -MF CMakeFiles/QuantifyGraph.dir/analysis/sequenceUtil.cc.o.d -o CMakeFiles/QuantifyGraph.dir/analysis/sequenceUtil.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc
[ 57%] Building CXX object CMakeFiles/ReadsToTranscripts.dir/analysis/stacktrace.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/ReadsToTranscripts.dir/analysis/stacktrace.cc.o -MF CMakeFiles/ReadsToTranscripts.dir/analysis/stacktrace.cc.o.d -o CMakeFiles/ReadsToTranscripts.dir/analysis/stacktrace.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/stacktrace.cc
/<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc: In function ‘bool contains_non_gatc(std::string)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc:33:26: warning: array subscript has type ‘char’ [-Wchar-subscripts]
   33 |         if (_base_to_int[c] > 3)
      |                          ^
/<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc: In function ‘kmer_int_type_t kmer_to_intval(std::string)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc:264:32: warning: array subscript has type ‘char’ [-Wchar-subscripts]
  264 |         int val = _base_to_int[c];
      |                                ^
[ 58%] Building CXX object CMakeFiles/ReadsToTranscripts.dir/base/ErrorHandling.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/ReadsToTranscripts.dir/base/ErrorHandling.cc.o -MF CMakeFiles/ReadsToTranscripts.dir/base/ErrorHandling.cc.o.d -o CMakeFiles/ReadsToTranscripts.dir/base/ErrorHandling.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc
[ 60%] Building CXX object CMakeFiles/QuantifyGraph.dir/analysis/stacktrace.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/QuantifyGraph.dir/analysis/stacktrace.cc.o -MF CMakeFiles/QuantifyGraph.dir/analysis/stacktrace.cc.o.d -o CMakeFiles/QuantifyGraph.dir/analysis/stacktrace.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/stacktrace.cc
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc: In function ‘void print_trace(FILE*, const char*, int)’:
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc:7:24: warning: unused parameter ‘out’ [-Wunused-parameter]
    7 | void print_trace(FILE *out, const char *file, int line)
      |                  ~~~~~~^~~
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc:7:41: warning: unused parameter ‘file’ [-Wunused-parameter]
    7 | void print_trace(FILE *out, const char *file, int line)
      |                             ~~~~~~~~~~~~^~~~
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc:7:51: warning: unused parameter ‘line’ [-Wunused-parameter]
    7 | void print_trace(FILE *out, const char *file, int line)
      |                                               ~~~~^~~~
[ 61%] Building CXX object CMakeFiles/ReadsToTranscripts.dir/base/FileParser.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/ReadsToTranscripts.dir/base/FileParser.cc.o -MF CMakeFiles/ReadsToTranscripts.dir/base/FileParser.cc.o.d -o CMakeFiles/ReadsToTranscripts.dir/base/FileParser.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/base/FileParser.cc
[ 62%] Building CXX object CMakeFiles/QuantifyGraph.dir/util/mutil.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/QuantifyGraph.dir/util/mutil.cc.o -MF CMakeFiles/QuantifyGraph.dir/util/mutil.cc.o.d -o CMakeFiles/QuantifyGraph.dir/util/mutil.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc
/<<PKGBUILDDIR>>/Chrysalis/base/FileParser.cc: In member function ‘bool StringParser::IsString(int)’:
/<<PKGBUILDDIR>>/Chrysalis/base/FileParser.cc:50:33: warning: unused parameter ‘index’ [-Wunused-parameter]
   50 | bool StringParser::IsString(int index)
      |                             ~~~~^~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiReadFileStream::ReadSimpleType(void*, long int)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:313:14: warning: passing argument 1 to ‘restrict’-qualified parameter aliases with argument 4 [-Wrestrict]
  313 |   if (fscanf(m_pFile, szText, sizeof(szText), m_pFile) == EOF) {
      |              ^~~~~~~                          ~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:303:51: warning: unused parameter ‘pData’ [-Wunused-parameter]
  303 | bool CMAsciiReadFileStream::ReadSimpleType(void * pData, long lenInBytes)
      |                                            ~~~~~~~^~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:303:63: warning: unused parameter ‘lenInBytes’ [-Wunused-parameter]
  303 | bool CMAsciiReadFileStream::ReadSimpleType(void * pData, long lenInBytes)
      |                                                          ~~~~~^~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiReadFileStream::ReadString(CMString&)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:436:14: warning: passing argument 1 to ‘restrict’-qualified parameter aliases with argument 4 [-Wrestrict]
  436 |   if (fscanf(m_pFile, pData, len, m_pFile) == EOF) {
      |              ^~~~~~~              ~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiWriteFileStream::WriteBlob(const void*, long int, long int)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:526:53: warning: unused parameter ‘pData’ [-Wunused-parameter]
  526 | bool CMAsciiWriteFileStream::WriteBlob(const void * pData, long lenInElements, long elSize)
      |                                        ~~~~~~~~~~~~~^~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:526:65: warning: unused parameter ‘lenInElements’ [-Wunused-parameter]
  526 | bool CMAsciiWriteFileStream::WriteBlob(const void * pData, long lenInElements, long elSize)
      |                                                            ~~~~~^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:526:85: warning: unused parameter ‘elSize’ [-Wunused-parameter]
  526 | bool CMAsciiWriteFileStream::WriteBlob(const void * pData, long lenInElements, long elSize)
      |                                                                                ~~~~~^~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MLog(const MCL_TCHAR*, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:738:53: warning: unused parameter ‘bLineFeed’ [-Wunused-parameter]
  738 | MDLLEXPORT void MLog(const MCL_TCHAR * szText, bool bLineFeed)
      |                                                ~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MLog(const MCL_TCHAR*, long int, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:761:63: warning: unused parameter ‘bLineFeed’ [-Wunused-parameter]
  761 | MDLLEXPORT void MLog(const MCL_TCHAR * szText, long val, bool bLineFeed)
      |                                                          ~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MLog(const MCL_TCHAR*, const MCL_TCHAR*, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:787:80: warning: unused parameter ‘bLineFeed’ [-Wunused-parameter]
  787 | MDLLEXPORT void MLog(const MCL_TCHAR * szText, const MCL_TCHAR * szText2, bool bLineFeed)
      |                                                                           ~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MCLSetUTF8Encode(bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:1288:39: warning: unused parameter ‘b’ [-Wunused-parameter]
 1288 | MDLLEXPORT void MCLSetUTF8Encode(bool b)
      |                                  ~~~~~^
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘bool AddUTF8Sig(CMString&)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:1688:16: warning: unused variable ‘p’ [-Wunused-variable]
 1688 |   const char * p = (const char*)string;
      |                ^
[ 64%] Building CXX object CMakeFiles/ReadsToTranscripts.dir/base/StringUtil.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/ReadsToTranscripts.dir/base/StringUtil.cc.o -MF CMakeFiles/ReadsToTranscripts.dir/base/StringUtil.cc.o.d -o CMakeFiles/ReadsToTranscripts.dir/base/StringUtil.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/base/StringUtil.cc
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiReadFileStream::ReadSimpleType(void*, long int)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:313:13: warning: ‘szText’ may be used uninitialized [-Wmaybe-uninitialized]
  313 |   if (fscanf(m_pFile, szText, sizeof(szText), m_pFile) == EOF) {
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/features.h:502,
                 from /usr/include/x86_64-linux-gnu/bits/libc-header-start.h:33,
                 from /usr/include/string.h:26,
                 from /<<PKGBUILDDIR>>/Chrysalis/util/mutil.h:19,
                 from /<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:9:
/usr/include/stdio.h:442:12: note: by argument 2 of type ‘const char*’ to ‘int fscanf(FILE*, const char*, ...)’ declared here
  442 | extern int __REDIRECT (fscanf, (FILE *__restrict __stream,
      |            ^~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:311:8: note: ‘szText’ declared here
  311 |   char szText[2048 * 10];
      |        ^~~~~~
[ 65%] Building CXX object CMakeFiles/ReadsToTranscripts.dir/util/mutil.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/ReadsToTranscripts.dir/util/mutil.cc.o -MF CMakeFiles/ReadsToTranscripts.dir/util/mutil.cc.o.d -o CMakeFiles/ReadsToTranscripts.dir/util/mutil.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc
[ 67%] Linking CXX executable QuantifyGraph
/usr/bin/cmake -E cmake_link_script CMakeFiles/QuantifyGraph.dir/link.txt --verbose=1
/usr/bin/g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -lm -ldl  -lrt -rdynamic CMakeFiles/QuantifyGraph.dir/aligns/KmerAlignCore.cc.o CMakeFiles/QuantifyGraph.dir/analysis/AACodons.cc.o CMakeFiles/QuantifyGraph.dir/analysis/DNAVector.cc.o CMakeFiles/QuantifyGraph.dir/analysis/KmerTable.cc.o CMakeFiles/QuantifyGraph.dir/analysis/NonRedKmerTable.cc.o CMakeFiles/QuantifyGraph.dir/analysis/QuantifyGraph.cc.o CMakeFiles/QuantifyGraph.dir/base/ErrorHandling.cc.o CMakeFiles/QuantifyGraph.dir/base/FileParser.cc.o CMakeFiles/QuantifyGraph.dir/base/StringUtil.cc.o CMakeFiles/QuantifyGraph.dir/analysis/sequenceUtil.cc.o CMakeFiles/QuantifyGraph.dir/analysis/stacktrace.cc.o CMakeFiles/QuantifyGraph.dir/util/mutil.cc.o -o QuantifyGraph
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiReadFileStream::ReadSimpleType(void*, long int)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:313:14: warning: passing argument 1 to ‘restrict’-qualified parameter aliases with argument 4 [-Wrestrict]
  313 |   if (fscanf(m_pFile, szText, sizeof(szText), m_pFile) == EOF) {
      |              ^~~~~~~                          ~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:303:51: warning: unused parameter ‘pData’ [-Wunused-parameter]
  303 | bool CMAsciiReadFileStream::ReadSimpleType(void * pData, long lenInBytes)
      |                                            ~~~~~~~^~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:303:63: warning: unused parameter ‘lenInBytes’ [-Wunused-parameter]
  303 | bool CMAsciiReadFileStream::ReadSimpleType(void * pData, long lenInBytes)
      |                                                          ~~~~~^~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiReadFileStream::ReadString(CMString&)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:436:14: warning: passing argument 1 to ‘restrict’-qualified parameter aliases with argument 4 [-Wrestrict]
  436 |   if (fscanf(m_pFile, pData, len, m_pFile) == EOF) {
      |              ^~~~~~~              ~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiWriteFileStream::WriteBlob(const void*, long int, long int)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:526:53: warning: unused parameter ‘pData’ [-Wunused-parameter]
  526 | bool CMAsciiWriteFileStream::WriteBlob(const void * pData, long lenInElements, long elSize)
      |                                        ~~~~~~~~~~~~~^~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:526:65: warning: unused parameter ‘lenInElements’ [-Wunused-parameter]
  526 | bool CMAsciiWriteFileStream::WriteBlob(const void * pData, long lenInElements, long elSize)
      |                                                            ~~~~~^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:526:85: warning: unused parameter ‘elSize’ [-Wunused-parameter]
  526 | bool CMAsciiWriteFileStream::WriteBlob(const void * pData, long lenInElements, long elSize)
      |                                                                                ~~~~~^~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MLog(const MCL_TCHAR*, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:738:53: warning: unused parameter ‘bLineFeed’ [-Wunused-parameter]
  738 | MDLLEXPORT void MLog(const MCL_TCHAR * szText, bool bLineFeed)
      |                                                ~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MLog(const MCL_TCHAR*, long int, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:761:63: warning: unused parameter ‘bLineFeed’ [-Wunused-parameter]
  761 | MDLLEXPORT void MLog(const MCL_TCHAR * szText, long val, bool bLineFeed)
      |                                                          ~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MLog(const MCL_TCHAR*, const MCL_TCHAR*, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:787:80: warning: unused parameter ‘bLineFeed’ [-Wunused-parameter]
  787 | MDLLEXPORT void MLog(const MCL_TCHAR * szText, const MCL_TCHAR * szText2, bool bLineFeed)
      |                                                                           ~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MCLSetUTF8Encode(bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:1288:39: warning: unused parameter ‘b’ [-Wunused-parameter]
 1288 | MDLLEXPORT void MCLSetUTF8Encode(bool b)
      |                                  ~~~~~^
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘bool AddUTF8Sig(CMString&)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:1688:16: warning: unused variable ‘p’ [-Wunused-variable]
 1688 |   const char * p = (const char*)string;
      |                ^
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Chrysalis_build'
[ 67%] Built target QuantifyGraph
make  -f CMakeFiles/BubbleUpClustering.dir/build.make CMakeFiles/BubbleUpClustering.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/Chrysalis_build'
cd /<<PKGBUILDDIR>>/Chrysalis_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>>/Chrysalis /<<PKGBUILDDIR>>/Chrysalis /<<PKGBUILDDIR>>/Chrysalis_build /<<PKGBUILDDIR>>/Chrysalis_build /<<PKGBUILDDIR>>/Chrysalis_build/CMakeFiles/BubbleUpClustering.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Chrysalis_build'
make  -f CMakeFiles/BubbleUpClustering.dir/build.make CMakeFiles/BubbleUpClustering.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/Chrysalis_build'
[ 68%] Building CXX object CMakeFiles/BubbleUpClustering.dir/aligns/KmerAlignCore.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/BubbleUpClustering.dir/aligns/KmerAlignCore.cc.o -MF CMakeFiles/BubbleUpClustering.dir/aligns/KmerAlignCore.cc.o.d -o CMakeFiles/BubbleUpClustering.dir/aligns/KmerAlignCore.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiReadFileStream::ReadSimpleType(void*, long int)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:313:13: warning: ‘szText’ may be used uninitialized [-Wmaybe-uninitialized]
  313 |   if (fscanf(m_pFile, szText, sizeof(szText), m_pFile) == EOF) {
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/features.h:502,
                 from /usr/include/x86_64-linux-gnu/bits/libc-header-start.h:33,
                 from /usr/include/string.h:26,
                 from /<<PKGBUILDDIR>>/Chrysalis/util/mutil.h:19,
                 from /<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:9:
/usr/include/stdio.h:442:12: note: by argument 2 of type ‘const char*’ to ‘int fscanf(FILE*, const char*, ...)’ declared here
  442 | extern int __REDIRECT (fscanf, (FILE *__restrict __stream,
      |            ^~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:311:8: note: ‘szText’ declared here
  311 |   char szText[2048 * 10];
      |        ^~~~~~
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘void KmerAlignCore::AddData(const vecDNAVector&, const vecNumVector&, int)’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:79:49: warning: unused variable ‘t’ [-Wunused-variable]
   79 |                 KmerAlignCoreRecordStoreTable & t = m_table; // not used?
      |                                                 ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:49:9: warning: unused variable ‘i’ [-Wunused-variable]
   49 |     int i, j, k;
      |         ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘void KmerAlignCore::AddData(const DNAVector&, int, int, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:128:9: warning: unused variable ‘i’ [-Wunused-variable]
  128 |     int i, j, k;
      |         ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:128:12: warning: unused variable ‘j’ [-Wunused-variable]
  128 |     int i, j, k;
      |            ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘void KmerAlignCore::SortAll()’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:148:9: warning: unused variable ‘i’ [-Wunused-variable]
  148 |     int i, j;
      |         ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘const svec<KmerAlignCoreRecord>& KmerAlignCore::GetMatchesDirectly(const DNAVector&, int)’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:158:9: warning: unused variable ‘size’ [-Wunused-variable]
  158 |     int size = m_pTrans->GetSize();
      |         ^~~~
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:159:9: warning: unused variable ‘i’ [-Wunused-variable]
  159 |     int i, j;
      |         ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:159:12: warning: unused variable ‘j’ [-Wunused-variable]
  159 |     int i, j;
      |            ^
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc: In member function ‘void KmerAlignCore::MergeSortFilter(svec<KmerAlignCoreRecord>&, const svec<KmerAlignCoreRecord>&, const svec<KmerAlignCoreRecord>&)’:
/<<PKGBUILDDIR>>/Chrysalis/aligns/KmerAlignCore.cc:291:9: warning: unused variable ‘i’ [-Wunused-variable]
  291 |     int i;
      |         ^
[ 70%] Linking CXX executable ReadsToTranscripts
/usr/bin/cmake -E cmake_link_script CMakeFiles/ReadsToTranscripts.dir/link.txt --verbose=1
/usr/bin/g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -lm -ldl  -lrt -rdynamic CMakeFiles/ReadsToTranscripts.dir/analysis/AACodons.cc.o CMakeFiles/ReadsToTranscripts.dir/analysis/DNAVector.cc.o CMakeFiles/ReadsToTranscripts.dir/analysis/NonRedKmerTable.cc.o CMakeFiles/ReadsToTranscripts.dir/analysis/ReadsToTranscripts.cc.o CMakeFiles/ReadsToTranscripts.dir/analysis/sequenceUtil.cc.o CMakeFiles/ReadsToTranscripts.dir/analysis/stacktrace.cc.o CMakeFiles/ReadsToTranscripts.dir/base/ErrorHandling.cc.o CMakeFiles/ReadsToTranscripts.dir/base/FileParser.cc.o CMakeFiles/ReadsToTranscripts.dir/base/StringUtil.cc.o CMakeFiles/ReadsToTranscripts.dir/util/mutil.cc.o -o ReadsToTranscripts
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Chrysalis_build'
[ 70%] Built target ReadsToTranscripts
make  -f CMakeFiles/CreateIwormFastaBundle.dir/build.make CMakeFiles/CreateIwormFastaBundle.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/Chrysalis_build'
cd /<<PKGBUILDDIR>>/Chrysalis_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>>/Chrysalis /<<PKGBUILDDIR>>/Chrysalis /<<PKGBUILDDIR>>/Chrysalis_build /<<PKGBUILDDIR>>/Chrysalis_build /<<PKGBUILDDIR>>/Chrysalis_build/CMakeFiles/CreateIwormFastaBundle.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Chrysalis_build'
make  -f CMakeFiles/CreateIwormFastaBundle.dir/build.make CMakeFiles/CreateIwormFastaBundle.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/Chrysalis_build'
[ 71%] Building CXX object CMakeFiles/CreateIwormFastaBundle.dir/analysis/AACodons.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/CreateIwormFastaBundle.dir/analysis/AACodons.cc.o -MF CMakeFiles/CreateIwormFastaBundle.dir/analysis/AACodons.cc.o.d -o CMakeFiles/CreateIwormFastaBundle.dir/analysis/AACodons.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/AACodons.cc
[ 72%] Building CXX object CMakeFiles/BubbleUpClustering.dir/analysis/AACodons.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/BubbleUpClustering.dir/analysis/AACodons.cc.o -MF CMakeFiles/BubbleUpClustering.dir/analysis/AACodons.cc.o.d -o CMakeFiles/BubbleUpClustering.dir/analysis/AACodons.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/AACodons.cc
[ 74%] Building CXX object CMakeFiles/CreateIwormFastaBundle.dir/analysis/CreateIwormFastaBundle.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/CreateIwormFastaBundle.dir/analysis/CreateIwormFastaBundle.cc.o -MF CMakeFiles/CreateIwormFastaBundle.dir/analysis/CreateIwormFastaBundle.cc.o.d -o CMakeFiles/CreateIwormFastaBundle.dir/analysis/CreateIwormFastaBundle.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/CreateIwormFastaBundle.cc
[ 75%] Building CXX object CMakeFiles/BubbleUpClustering.dir/analysis/BubbleUpClustering.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/BubbleUpClustering.dir/analysis/BubbleUpClustering.cc.o -MF CMakeFiles/BubbleUpClustering.dir/analysis/BubbleUpClustering.cc.o.d -o CMakeFiles/BubbleUpClustering.dir/analysis/BubbleUpClustering.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/BubbleUpClustering.cc
/<<PKGBUILDDIR>>/Chrysalis/analysis/CreateIwormFastaBundle.cc: In function ‘int main(int, char**)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/CreateIwormFastaBundle.cc:181:17: warning: unused variable ‘num_iworm_contigs’ [-Wunused-variable]
  181 |             int num_iworm_contigs = parser.AsInt(2);
      |                 ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/CreateIwormFastaBundle.cc:143:10: warning: unused variable ‘DEBUG’ [-Wunused-variable]
  143 |     bool DEBUG = P.GetBoolValueFor(debugCmmd);
      |          ^~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/CreateIwormFastaBundle.cc:166:12: warning: unused variable ‘pOut’ [-Wunused-variable]
  166 |     FILE * pOut = NULL;
      |            ^~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/BubbleUpClustering.cc: In function ‘svec<Pool> grow_prioritized_clusters(std::string&, std::map<int, Pool>&)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/BubbleUpClustering.cc:111:78: warning: unused parameter ‘weld_reinforced_iworm_clusters’ [-Wunused-parameter]
  111 | svec<Pool> grow_prioritized_clusters(string& weld_graph_file, map<int,Pool>& weld_reinforced_iworm_clusters) {
      |                                                               ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/BubbleUpClustering.cc: In function ‘svec<Pool> sl_cluster_pools(std::map<int, Pool>&, std::map<int, bool>&)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/BubbleUpClustering.cc:326:40: warning: implicitly-declared ‘Pool& Pool::operator=(const Pool&)’ is deprecated [-Wdeprecated-copy]
  326 |                 pool_vec[oldpool_id] = tmp;
      |                                        ^~~
In file included from /<<PKGBUILDDIR>>/Chrysalis/analysis/BubbleUpClustering.cc:19:
/<<PKGBUILDDIR>>/Chrysalis/analysis/Pool.h:24:5: note: because ‘Pool’ has user-provided ‘Pool::Pool(const Pool&)’
   24 |     Pool(const Pool& p) {
      |     ^~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/BubbleUpClustering.cc: In function ‘void populate_weld_reinforced_iworm_clusters(std::string&, std::map<int, Pool>&)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/BubbleUpClustering.cc:525:57: warning: implicitly-declared ‘Pool& Pool::operator=(const Pool&)’ is deprecated [-Wdeprecated-copy]
  525 |             weld_reinforced_iworm_clusters[ node_id ] = p;
      |                                                         ^
/<<PKGBUILDDIR>>/Chrysalis/analysis/Pool.h:24:5: note: because ‘Pool’ has user-provided ‘Pool::Pool(const Pool&)’
   24 |     Pool(const Pool& p) {
      |     ^~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/BubbleUpClustering.cc: In function ‘int main(int, char**)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/BubbleUpClustering.cc:628:30: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  628 |         for (size_t j = 0; j < p.size(); j++) {
      |                            ~~^~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/BubbleUpClustering.cc:641:30: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  641 |         for (size_t j = 0; j < p.size(); j++) {
      |                            ~~^~~~~~~~~~
[ 77%] Building CXX object CMakeFiles/CreateIwormFastaBundle.dir/analysis/DNAVector.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/CreateIwormFastaBundle.dir/analysis/DNAVector.cc.o -MF CMakeFiles/CreateIwormFastaBundle.dir/analysis/DNAVector.cc.o.d -o CMakeFiles/CreateIwormFastaBundle.dir/analysis/DNAVector.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/DNAVector.cc
[ 78%] Building CXX object CMakeFiles/BubbleUpClustering.dir/analysis/DNAVector.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/BubbleUpClustering.dir/analysis/DNAVector.cc.o -MF CMakeFiles/BubbleUpClustering.dir/analysis/DNAVector.cc.o.d -o CMakeFiles/BubbleUpClustering.dir/analysis/DNAVector.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/DNAVector.cc
[ 80%] Building CXX object CMakeFiles/CreateIwormFastaBundle.dir/base/ErrorHandling.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/CreateIwormFastaBundle.dir/base/ErrorHandling.cc.o -MF CMakeFiles/CreateIwormFastaBundle.dir/base/ErrorHandling.cc.o.d -o CMakeFiles/CreateIwormFastaBundle.dir/base/ErrorHandling.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc: In function ‘void print_trace(FILE*, const char*, int)’:
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc:7:24: warning: unused parameter ‘out’ [-Wunused-parameter]
    7 | void print_trace(FILE *out, const char *file, int line)
      |                  ~~~~~~^~~
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc:7:41: warning: unused parameter ‘file’ [-Wunused-parameter]
    7 | void print_trace(FILE *out, const char *file, int line)
      |                             ~~~~~~~~~~~~^~~~
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc:7:51: warning: unused parameter ‘line’ [-Wunused-parameter]
    7 | void print_trace(FILE *out, const char *file, int line)
      |                                               ~~~~^~~~
[ 81%] Building CXX object CMakeFiles/CreateIwormFastaBundle.dir/base/FileParser.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/CreateIwormFastaBundle.dir/base/FileParser.cc.o -MF CMakeFiles/CreateIwormFastaBundle.dir/base/FileParser.cc.o.d -o CMakeFiles/CreateIwormFastaBundle.dir/base/FileParser.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/base/FileParser.cc
/<<PKGBUILDDIR>>/Chrysalis/base/FileParser.cc: In member function ‘bool StringParser::IsString(int)’:
/<<PKGBUILDDIR>>/Chrysalis/base/FileParser.cc:50:33: warning: unused parameter ‘index’ [-Wunused-parameter]
   50 | bool StringParser::IsString(int index)
      |                             ~~~~^~~~~
[ 82%] Building CXX object CMakeFiles/CreateIwormFastaBundle.dir/base/StringUtil.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/CreateIwormFastaBundle.dir/base/StringUtil.cc.o -MF CMakeFiles/CreateIwormFastaBundle.dir/base/StringUtil.cc.o.d -o CMakeFiles/CreateIwormFastaBundle.dir/base/StringUtil.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/base/StringUtil.cc
[ 84%] Building CXX object CMakeFiles/BubbleUpClustering.dir/analysis/DeBruijnGraph.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/BubbleUpClustering.dir/analysis/DeBruijnGraph.cc.o -MF CMakeFiles/BubbleUpClustering.dir/analysis/DeBruijnGraph.cc.o.d -o CMakeFiles/BubbleUpClustering.dir/analysis/DeBruijnGraph.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc: In member function ‘void DeBruijnKmer::add_next_kmer(kmer_int_type_t, unsigned int)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc:154:66: warning: unused parameter ‘kmer_length’ [-Wunused-parameter]
  154 | void DeBruijnKmer::add_next_kmer(kmer_int_type_t k, unsigned int kmer_length) {
      |                                                     ~~~~~~~~~~~~~^~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc: In member function ‘std::vector<DeBruijnKmer> DeBruijnGraph::deconvolute_DS_mirror_graph()’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc:355:22: warning: variable ‘rdk’ set but not used [-Wunused-but-set-variable]
  355 |         DeBruijnKmer rdk = _kmer_map.find(rk)->second;
      |                      ^~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc: In member function ‘std::vector<std::__cxx11::basic_string<char> > DeBruijnGraph::get_candidate_weldmers(kmer_int_type_t, int)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc:473:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  473 |     for (int i = 0; i < left_extensions.size(); i++) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc:476:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  476 |         for (int j = 0; j < right_extensions.size(); j++) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc: In member function ‘void DeBruijnGraph::recursively_construct_kmer_extensions(kmer_int_type_t, std::vector<char>&, std::vector<std::__cxx11::basic_string<char> >&, char, std::map<long long unsigned int, bool>&, int)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc:513:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<long long unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  513 |     for (int i = 0; i < adjacent_kmers.size(); i++) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/DeBruijnGraph.cc:527:41: warning: comparison of integer expressions of different signedness: ‘std::vector<char>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  527 |         if (kmer_extension_chars.size() == flank_extension_length) {
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object CMakeFiles/CreateIwormFastaBundle.dir/util/mutil.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/CreateIwormFastaBundle.dir/util/mutil.cc.o -MF CMakeFiles/CreateIwormFastaBundle.dir/util/mutil.cc.o.d -o CMakeFiles/CreateIwormFastaBundle.dir/util/mutil.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiReadFileStream::ReadSimpleType(void*, long int)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:313:14: warning: passing argument 1 to ‘restrict’-qualified parameter aliases with argument 4 [-Wrestrict]
  313 |   if (fscanf(m_pFile, szText, sizeof(szText), m_pFile) == EOF) {
      |              ^~~~~~~                          ~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:303:51: warning: unused parameter ‘pData’ [-Wunused-parameter]
  303 | bool CMAsciiReadFileStream::ReadSimpleType(void * pData, long lenInBytes)
      |                                            ~~~~~~~^~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:303:63: warning: unused parameter ‘lenInBytes’ [-Wunused-parameter]
  303 | bool CMAsciiReadFileStream::ReadSimpleType(void * pData, long lenInBytes)
      |                                                          ~~~~~^~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiReadFileStream::ReadString(CMString&)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:436:14: warning: passing argument 1 to ‘restrict’-qualified parameter aliases with argument 4 [-Wrestrict]
  436 |   if (fscanf(m_pFile, pData, len, m_pFile) == EOF) {
      |              ^~~~~~~              ~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiWriteFileStream::WriteBlob(const void*, long int, long int)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:526:53: warning: unused parameter ‘pData’ [-Wunused-parameter]
  526 | bool CMAsciiWriteFileStream::WriteBlob(const void * pData, long lenInElements, long elSize)
      |                                        ~~~~~~~~~~~~~^~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:526:65: warning: unused parameter ‘lenInElements’ [-Wunused-parameter]
  526 | bool CMAsciiWriteFileStream::WriteBlob(const void * pData, long lenInElements, long elSize)
      |                                                            ~~~~~^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:526:85: warning: unused parameter ‘elSize’ [-Wunused-parameter]
  526 | bool CMAsciiWriteFileStream::WriteBlob(const void * pData, long lenInElements, long elSize)
      |                                                                                ~~~~~^~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MLog(const MCL_TCHAR*, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:738:53: warning: unused parameter ‘bLineFeed’ [-Wunused-parameter]
  738 | MDLLEXPORT void MLog(const MCL_TCHAR * szText, bool bLineFeed)
      |                                                ~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MLog(const MCL_TCHAR*, long int, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:761:63: warning: unused parameter ‘bLineFeed’ [-Wunused-parameter]
  761 | MDLLEXPORT void MLog(const MCL_TCHAR * szText, long val, bool bLineFeed)
      |                                                          ~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MLog(const MCL_TCHAR*, const MCL_TCHAR*, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:787:80: warning: unused parameter ‘bLineFeed’ [-Wunused-parameter]
  787 | MDLLEXPORT void MLog(const MCL_TCHAR * szText, const MCL_TCHAR * szText2, bool bLineFeed)
      |                                                                           ~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MCLSetUTF8Encode(bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:1288:39: warning: unused parameter ‘b’ [-Wunused-parameter]
 1288 | MDLLEXPORT void MCLSetUTF8Encode(bool b)
      |                                  ~~~~~^
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘bool AddUTF8Sig(CMString&)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:1688:16: warning: unused variable ‘p’ [-Wunused-variable]
 1688 |   const char * p = (const char*)string;
      |                ^
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiReadFileStream::ReadSimpleType(void*, long int)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:313:13: warning: ‘szText’ may be used uninitialized [-Wmaybe-uninitialized]
  313 |   if (fscanf(m_pFile, szText, sizeof(szText), m_pFile) == EOF) {
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/features.h:502,
                 from /usr/include/x86_64-linux-gnu/bits/libc-header-start.h:33,
                 from /usr/include/string.h:26,
                 from /<<PKGBUILDDIR>>/Chrysalis/util/mutil.h:19,
                 from /<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:9:
/usr/include/stdio.h:442:12: note: by argument 2 of type ‘const char*’ to ‘int fscanf(FILE*, const char*, ...)’ declared here
  442 | extern int __REDIRECT (fscanf, (FILE *__restrict __stream,
      |            ^~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:311:8: note: ‘szText’ declared here
  311 |   char szText[2048 * 10];
      |        ^~~~~~
[ 87%] Building CXX object CMakeFiles/BubbleUpClustering.dir/analysis/KmerTable.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/BubbleUpClustering.dir/analysis/KmerTable.cc.o -MF CMakeFiles/BubbleUpClustering.dir/analysis/KmerTable.cc.o.d -o CMakeFiles/BubbleUpClustering.dir/analysis/KmerTable.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/KmerTable.cc
[ 88%] Linking CXX executable CreateIwormFastaBundle
/usr/bin/cmake -E cmake_link_script CMakeFiles/CreateIwormFastaBundle.dir/link.txt --verbose=1
/usr/bin/g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -lm -ldl  -lrt -rdynamic CMakeFiles/CreateIwormFastaBundle.dir/analysis/AACodons.cc.o CMakeFiles/CreateIwormFastaBundle.dir/analysis/CreateIwormFastaBundle.cc.o CMakeFiles/CreateIwormFastaBundle.dir/analysis/DNAVector.cc.o CMakeFiles/CreateIwormFastaBundle.dir/base/ErrorHandling.cc.o CMakeFiles/CreateIwormFastaBundle.dir/base/FileParser.cc.o CMakeFiles/CreateIwormFastaBundle.dir/base/StringUtil.cc.o CMakeFiles/CreateIwormFastaBundle.dir/util/mutil.cc.o -o CreateIwormFastaBundle
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Chrysalis_build'
[ 88%] Built target CreateIwormFastaBundle
[ 90%] Building CXX object CMakeFiles/BubbleUpClustering.dir/analysis/NonRedKmerTable.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/BubbleUpClustering.dir/analysis/NonRedKmerTable.cc.o -MF CMakeFiles/BubbleUpClustering.dir/analysis/NonRedKmerTable.cc.o.d -o CMakeFiles/BubbleUpClustering.dir/analysis/NonRedKmerTable.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc
/<<PKGBUILDDIR>>/Chrysalis/analysis/KmerTable.cc: In member function ‘long long int KmerSequence::BasesToNumber(const DNAVector&, int)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/KmerTable.cc:27:13: warning: unused variable ‘i’ [-Wunused-variable]
   27 |   long long i;
      |             ^
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc: In member function ‘void NonRedKmerTable::SetUp(const vecDNAVector&, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:46:20: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   46 |         for (j=0; j<=d.size()-m_k; j++) {
      |                   ~^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:56:20: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   56 |         for (j=0; j<=d.size()-m_k; j++) {
      |                   ~^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:79:18: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   79 |       for (j=0; j<=d.size()-m_k; j++) {
      |                 ~^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc: In member function ‘void NonRedKmerTable::AddData(const vecDNAVector&)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:109:16: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  109 |     for (j=0; j<= d.isize()-m_k; j++) {
      |               ~^~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc: In member function ‘void NonRedKmerTable::AddData(vecDNAVectorStream&)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/NonRedKmerTable.cc:125:9: warning: unused variable ‘i’ [-Wunused-variable]
  125 |     int i, j;
      |         ^
[ 91%] Building CXX object CMakeFiles/BubbleUpClustering.dir/analysis/sequenceUtil.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/BubbleUpClustering.dir/analysis/sequenceUtil.cc.o -MF CMakeFiles/BubbleUpClustering.dir/analysis/sequenceUtil.cc.o.d -o CMakeFiles/BubbleUpClustering.dir/analysis/sequenceUtil.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc
/<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc: In function ‘bool contains_non_gatc(std::string)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc:33:26: warning: array subscript has type ‘char’ [-Wchar-subscripts]
   33 |         if (_base_to_int[c] > 3)
      |                          ^
/<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc: In function ‘kmer_int_type_t kmer_to_intval(std::string)’:
/<<PKGBUILDDIR>>/Chrysalis/analysis/sequenceUtil.cc:264:32: warning: array subscript has type ‘char’ [-Wchar-subscripts]
  264 |         int val = _base_to_int[c];
      |                                ^
[ 92%] Building CXX object CMakeFiles/BubbleUpClustering.dir/analysis/stacktrace.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/BubbleUpClustering.dir/analysis/stacktrace.cc.o -MF CMakeFiles/BubbleUpClustering.dir/analysis/stacktrace.cc.o.d -o CMakeFiles/BubbleUpClustering.dir/analysis/stacktrace.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/analysis/stacktrace.cc
[ 94%] Building CXX object CMakeFiles/BubbleUpClustering.dir/base/ErrorHandling.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/BubbleUpClustering.dir/base/ErrorHandling.cc.o -MF CMakeFiles/BubbleUpClustering.dir/base/ErrorHandling.cc.o.d -o CMakeFiles/BubbleUpClustering.dir/base/ErrorHandling.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc
[ 95%] Building CXX object CMakeFiles/BubbleUpClustering.dir/base/FileParser.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/BubbleUpClustering.dir/base/FileParser.cc.o -MF CMakeFiles/BubbleUpClustering.dir/base/FileParser.cc.o.d -o CMakeFiles/BubbleUpClustering.dir/base/FileParser.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/base/FileParser.cc
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc: In function ‘void print_trace(FILE*, const char*, int)’:
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc:7:24: warning: unused parameter ‘out’ [-Wunused-parameter]
    7 | void print_trace(FILE *out, const char *file, int line)
      |                  ~~~~~~^~~
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc:7:41: warning: unused parameter ‘file’ [-Wunused-parameter]
    7 | void print_trace(FILE *out, const char *file, int line)
      |                             ~~~~~~~~~~~~^~~~
/<<PKGBUILDDIR>>/Chrysalis/base/ErrorHandling.cc:7:51: warning: unused parameter ‘line’ [-Wunused-parameter]
    7 | void print_trace(FILE *out, const char *file, int line)
      |                                               ~~~~^~~~
[ 97%] Building CXX object CMakeFiles/BubbleUpClustering.dir/base/StringUtil.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/BubbleUpClustering.dir/base/StringUtil.cc.o -MF CMakeFiles/BubbleUpClustering.dir/base/StringUtil.cc.o.d -o CMakeFiles/BubbleUpClustering.dir/base/StringUtil.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/base/StringUtil.cc
/<<PKGBUILDDIR>>/Chrysalis/base/FileParser.cc: In member function ‘bool StringParser::IsString(int)’:
/<<PKGBUILDDIR>>/Chrysalis/base/FileParser.cc:50:33: warning: unused parameter ‘index’ [-Wunused-parameter]
   50 | bool StringParser::IsString(int index)
      |                             ~~~~^~~~~
[ 98%] Building CXX object CMakeFiles/BubbleUpClustering.dir/util/mutil.cc.o
/usr/bin/g++  -I/<<PKGBUILDDIR>>/Chrysalis -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -MD -MT CMakeFiles/BubbleUpClustering.dir/util/mutil.cc.o -MF CMakeFiles/BubbleUpClustering.dir/util/mutil.cc.o.d -o CMakeFiles/BubbleUpClustering.dir/util/mutil.cc.o -c /<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiReadFileStream::ReadSimpleType(void*, long int)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:313:14: warning: passing argument 1 to ‘restrict’-qualified parameter aliases with argument 4 [-Wrestrict]
  313 |   if (fscanf(m_pFile, szText, sizeof(szText), m_pFile) == EOF) {
      |              ^~~~~~~                          ~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:303:51: warning: unused parameter ‘pData’ [-Wunused-parameter]
  303 | bool CMAsciiReadFileStream::ReadSimpleType(void * pData, long lenInBytes)
      |                                            ~~~~~~~^~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:303:63: warning: unused parameter ‘lenInBytes’ [-Wunused-parameter]
  303 | bool CMAsciiReadFileStream::ReadSimpleType(void * pData, long lenInBytes)
      |                                                          ~~~~~^~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiReadFileStream::ReadString(CMString&)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:436:14: warning: passing argument 1 to ‘restrict’-qualified parameter aliases with argument 4 [-Wrestrict]
  436 |   if (fscanf(m_pFile, pData, len, m_pFile) == EOF) {
      |              ^~~~~~~              ~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiWriteFileStream::WriteBlob(const void*, long int, long int)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:526:53: warning: unused parameter ‘pData’ [-Wunused-parameter]
  526 | bool CMAsciiWriteFileStream::WriteBlob(const void * pData, long lenInElements, long elSize)
      |                                        ~~~~~~~~~~~~~^~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:526:65: warning: unused parameter ‘lenInElements’ [-Wunused-parameter]
  526 | bool CMAsciiWriteFileStream::WriteBlob(const void * pData, long lenInElements, long elSize)
      |                                                            ~~~~~^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:526:85: warning: unused parameter ‘elSize’ [-Wunused-parameter]
  526 | bool CMAsciiWriteFileStream::WriteBlob(const void * pData, long lenInElements, long elSize)
      |                                                                                ~~~~~^~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MLog(const MCL_TCHAR*, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:738:53: warning: unused parameter ‘bLineFeed’ [-Wunused-parameter]
  738 | MDLLEXPORT void MLog(const MCL_TCHAR * szText, bool bLineFeed)
      |                                                ~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MLog(const MCL_TCHAR*, long int, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:761:63: warning: unused parameter ‘bLineFeed’ [-Wunused-parameter]
  761 | MDLLEXPORT void MLog(const MCL_TCHAR * szText, long val, bool bLineFeed)
      |                                                          ~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MLog(const MCL_TCHAR*, const MCL_TCHAR*, bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:787:80: warning: unused parameter ‘bLineFeed’ [-Wunused-parameter]
  787 | MDLLEXPORT void MLog(const MCL_TCHAR * szText, const MCL_TCHAR * szText2, bool bLineFeed)
      |                                                                           ~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘void MCLSetUTF8Encode(bool)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:1288:39: warning: unused parameter ‘b’ [-Wunused-parameter]
 1288 | MDLLEXPORT void MCLSetUTF8Encode(bool b)
      |                                  ~~~~~^
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In function ‘bool AddUTF8Sig(CMString&)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:1688:16: warning: unused variable ‘p’ [-Wunused-variable]
 1688 |   const char * p = (const char*)string;
      |                ^
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc: In member function ‘virtual bool CMAsciiReadFileStream::ReadSimpleType(void*, long int)’:
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:313:13: warning: ‘szText’ may be used uninitialized [-Wmaybe-uninitialized]
  313 |   if (fscanf(m_pFile, szText, sizeof(szText), m_pFile) == EOF) {
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/features.h:502,
                 from /usr/include/x86_64-linux-gnu/bits/libc-header-start.h:33,
                 from /usr/include/string.h:26,
                 from /<<PKGBUILDDIR>>/Chrysalis/util/mutil.h:19,
                 from /<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:9:
/usr/include/stdio.h:442:12: note: by argument 2 of type ‘const char*’ to ‘int fscanf(FILE*, const char*, ...)’ declared here
  442 | extern int __REDIRECT (fscanf, (FILE *__restrict __stream,
      |            ^~~~~~~~~~
/<<PKGBUILDDIR>>/Chrysalis/util/mutil.cc:311:8: note: ‘szText’ declared here
  311 |   char szText[2048 * 10];
      |        ^~~~~~
[100%] Linking CXX executable BubbleUpClustering
/usr/bin/cmake -E cmake_link_script CMakeFiles/BubbleUpClustering.dir/link.txt --verbose=1
/usr/bin/g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -W -Wall -Wpedantic -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -lm -ldl  -lrt -rdynamic CMakeFiles/BubbleUpClustering.dir/aligns/KmerAlignCore.cc.o CMakeFiles/BubbleUpClustering.dir/analysis/AACodons.cc.o CMakeFiles/BubbleUpClustering.dir/analysis/BubbleUpClustering.cc.o CMakeFiles/BubbleUpClustering.dir/analysis/DNAVector.cc.o CMakeFiles/BubbleUpClustering.dir/analysis/DeBruijnGraph.cc.o CMakeFiles/BubbleUpClustering.dir/analysis/KmerTable.cc.o CMakeFiles/BubbleUpClustering.dir/analysis/NonRedKmerTable.cc.o CMakeFiles/BubbleUpClustering.dir/analysis/sequenceUtil.cc.o CMakeFiles/BubbleUpClustering.dir/analysis/stacktrace.cc.o CMakeFiles/BubbleUpClustering.dir/base/ErrorHandling.cc.o CMakeFiles/BubbleUpClustering.dir/base/FileParser.cc.o CMakeFiles/BubbleUpClustering.dir/base/StringUtil.cc.o CMakeFiles/BubbleUpClustering.dir/util/mutil.cc.o -o BubbleUpClustering
make[4]: Leaving directory '/<<PKGBUILDDIR>>/Chrysalis_build'
[100%] Built target BubbleUpClustering
make[3]: Leaving directory '/<<PKGBUILDDIR>>/Chrysalis_build'
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/Chrysalis_build/CMakeFiles 0
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Chrysalis_build'
for target in trinity-plugins/slclust trinity-plugins/scaffold_iworm_contigs trinity-plugins/bamsifter trinity-plugins/seqtk-trinity; do dh_auto_build \
                --sourcedirectory=${target}; done
	cd trinity-plugins/slclust && make -j2 "INSTALL=install --strip-program=true"
make[2]: Entering directory '/<<PKGBUILDDIR>>/trinity-plugins/slclust'
X=`pwd`; \
for i in src; \
do echo '<<<' $i '>>>'; cd $X/$i; make all; done
<<< src >>>
make[3]: Entering directory '/<<PKGBUILDDIR>>/trinity-plugins/slclust/src'
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I../include -Wall  -Wdate-time -D_FORTIFY_SOURCE=2  -c -o slcluster.o slcluster.cpp
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I../include -Wall  -Wdate-time -D_FORTIFY_SOURCE=2  -c -o graph.o graph.cpp
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I../include -Wall  -Wdate-time -D_FORTIFY_SOURCE=2  -c -o graphnode.o graphnode.cpp
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I../include -Wall  -Wdate-time -D_FORTIFY_SOURCE=2  -c -o cmd_line_opts.o cmd_line_opts.cpp
g++ -Wl,-z,relro -Wl,-z,now slcluster.o graph.o graphnode.o cmd_line_opts.o  -o slclust
chmod 755 slclust
make[3]: Leaving directory '/<<PKGBUILDDIR>>/trinity-plugins/slclust/src'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/trinity-plugins/slclust'
	cd trinity-plugins/scaffold_iworm_contigs && make -j2 "INSTALL=install --strip-program=true"
make[2]: Entering directory '/<<PKGBUILDDIR>>/trinity-plugins/scaffold_iworm_contigs'
g++ -Wl,-z,relro -Wl,-z,now -I../htslib -L../htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection ScaffoldIwormContigs.cpp error_checker.cpp -lhts -o scaffold_iworm_contigs
make[2]: Leaving directory '/<<PKGBUILDDIR>>/trinity-plugins/scaffold_iworm_contigs'
	cd trinity-plugins/bamsifter && make -j2 "INSTALL=install --strip-program=true"
make[2]: Entering directory '/<<PKGBUILDDIR>>/trinity-plugins/bamsifter'
g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -std=c++11 -o bamsifter sift_bam_max_cov.cpp -Wall -O2 -L./htslib/build/lib/ -I./htslib/build/include -lhts
cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++
make[2]: Leaving directory '/<<PKGBUILDDIR>>/trinity-plugins/bamsifter'
	cd trinity-plugins/seqtk-trinity && make -j2 "INSTALL=install --strip-program=true"
make[2]: Entering directory '/<<PKGBUILDDIR>>/trinity-plugins/seqtk-trinity'
cc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -O2 -Wno-unused-function -Wdate-time -D_FORTIFY_SOURCE=2 seqtk.c -o seqtk-trinity -lz -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/trinity-plugins/seqtk-trinity'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   jh_build
jh_build: warning: Java machine does not support --release 7, using --release 8
warning: [options] bootstrap class path not set in conjunction with -source 8
warning: [options] source value 8 is obsolete and will be removed in a future release
warning: [options] target value 8 is obsolete and will be removed in a future release
warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
./Butterfly/Butterfly/src/src/IsoformExpressionLearning.java:396: warning: [removal] Double(double) in Double has been deprecated and marked for removal
		Double len = new Double(0);
		             ^
./Butterfly/Butterfly/src/src/IsoformExpressionLearning.java:515: warning: [removal] Double(double) in Double has been deprecated and marked for removal
		Double sum = new Double(0);
		             ^
./Butterfly/Butterfly/src/src/IsoformExpressionLearning.java:576: warning: [removal] Double(double) in Double has been deprecated and marked for removal
			vec.set(i, new Double(0));
			           ^
./Butterfly/Butterfly/src/src/AlignmentStats.java:54: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
        alignedBaseCounter.put(nameA, new Integer(0));
                                      ^
./Butterfly/Butterfly/src/src/AlignmentStats.java:55: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
        alignedBaseCounter.put(nameB, new Integer(0));
                                      ^
./Butterfly/Butterfly/src/src/AlignmentStats.java:126: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
        			alignedBaseCounter.put(nameA, new Integer(alignedBaseCounter.get(nameA) + 1));
        			                              ^
./Butterfly/Butterfly/src/src/AlignmentStats.java:130: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
        			alignedBaseCounter.put(nameB, new Integer (alignedBaseCounter.get(nameB) + 1));
        			                              ^
./Butterfly/Butterfly/src/src/TransAssembly_allProbPaths.java:4043: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
			transcripts.put(path, new Pair(new Integer(1), new Integer(1)));
			                               ^
./Butterfly/Butterfly/src/src/TransAssembly_allProbPaths.java:4043: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
			transcripts.put(path, new Pair(new Integer(1), new Integer(1)));
			                                               ^
./Butterfly/Butterfly/src/src/TransAssembly_allProbPaths.java:4067: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
			transcripts.put(pp.getPath1(), new Pair(new Integer(1), new Integer(1)));
			                                        ^
./Butterfly/Butterfly/src/src/TransAssembly_allProbPaths.java:4067: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
			transcripts.put(pp.getPath1(), new Pair(new Integer(1), new Integer(1)));
			                                                        ^
./Butterfly/Butterfly/src/src/TransAssembly_allProbPaths.java:5998: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
							readParts.put(part_pairpath, new Integer(1));
							                             ^
./Butterfly/Butterfly/src/src/TransAssembly_allProbPaths.java:8311: warning: [removal] Boolean(boolean) in Boolean has been deprecated and marked for removal
				seen.put(p_pos, new Boolean(true));
				                ^
./Butterfly/Butterfly/src/src/TransAssembly_allProbPaths.java:8345: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
				transcripts.put(collapsed_path, new Pair(new Integer(1), new Integer(1)));
				                                         ^
./Butterfly/Butterfly/src/src/TransAssembly_allProbPaths.java:8345: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
				transcripts.put(collapsed_path, new Pair(new Integer(1), new Integer(1)));
				                                                         ^
./Butterfly/Butterfly/src/src/TransAssembly_allProbPaths.java:15068: warning: [removal] Boolean(boolean) in Boolean has been deprecated and marked for removal
			path_index.put(x, new Boolean(true));
			                  ^
./Butterfly/Butterfly/src/src/TransAssembly_allProbPaths.java:15095: warning: [removal] Boolean(boolean) in Boolean has been deprecated and marked for removal
			path_index.put(pathA.get(i), new Boolean(true));
			                             ^
./Butterfly/Butterfly/src/src/TransAssembly_allProbPaths.java:15118: warning: [removal] Boolean(boolean) in Boolean has been deprecated and marked for removal
			path_index.put(node, new Boolean(true));
			                     ^
./Butterfly/Butterfly/src/src/ZipperAlignment.java:39: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
	    as.alignedBaseCounter.put(nameA, new Integer(shorter_len));
	                                     ^
./Butterfly/Butterfly/src/src/ZipperAlignment.java:40: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
	    as.alignedBaseCounter.put(nameB, new Integer(shorter_len));
	                                     ^
./Butterfly/Butterfly/src/src/ZipperAlignment.java:71: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
	    as.alignedBaseCounter.put(nameA, new Integer(shorter_len));
	                                     ^
./Butterfly/Butterfly/src/src/ZipperAlignment.java:72: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
	    as.alignedBaseCounter.put(nameB, new Integer(shorter_len));
	                                     ^
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
26 warnings
./Butterfly/Butterfly/src/src/My_DFS.java:30: warning: @param argument "roots" is not a parameter name.
	 * @param roots 
	   ^
./Butterfly/Butterfly/src/src/PairPath.java:124: warning: @param argument "isCircular" is not a parameter name.
	 * @param isCircular the _isCircular to set
	   ^
./Butterfly/Butterfly/src/src/Read.java:18: warning: @param argument "toV" is not a parameter name.
	 * @param toV 
	   ^
./Butterfly/Butterfly/src/src/SeqVertex.java:80: warning: @param argument "nextID" is not a parameter name.
	 * @param nextID
	   ^
./Butterfly/Butterfly/src/src/SeqVertex.java:81: warning: @param argument "l" is not a parameter name.
	 * @param l
	   ^
./Butterfly/Butterfly/src/src/SeqVertex.java:155: warning: @param argument "_origButterflyID" is not a parameter name.
	 * @param _origButterflyID the _origButterflyID to set
	   ^
./Butterfly/Butterfly/src/src/SeqVertex.java:766: warning: @param argument "name" is not a parameter name.
	 * @param name
	   ^
./Butterfly/Butterfly/src/src/SeqVertex.java:767: warning: @param argument "weight" is not a parameter name.
	 * @param weight
	   ^
./Butterfly/Butterfly/src/src/SeqVertex.java:768: warning: @param argument "name2" is not a parameter name.
	 * @param name2
	   ^
./Butterfly/Butterfly/src/src/SeqVertex.java:769: warning: @param argument "weight2" is not a parameter name.
	 * @param weight2
	   ^
./Butterfly/Butterfly/src/src/TransAssembly_allProbPaths.java:15040: warning: @param argument "candidateNodes" is not a parameter name.
	 * @param candidateNodes
	   ^
./Butterfly/Butterfly/src/src/TransAssembly_allProbPaths.java:15041: warning: @param argument "l" is not a parameter name.
	 * @param l
	   ^
12 warnings
   debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
java -cp Butterfly.jar TransAssembly_allProbPaths -N 10000 -L 300 \
	-F 300 -C Butterfly/Butterfly/src/sample_data/c1.graph --stderr -V 20
Started
using Path alignment for path comparisons
combine paths if (identity=(numberOfMatches/shorterLen) > 98.0% or if we have <= 2 mismatches) and if we have internal gap lengths <= 10
path reinforcement distance computed based on 25% of max pair distance: 300 = 75 bases
SECTION
================
Parsing de Bruijn graph
======================

preProcessGraphFile: Butterfly/Butterfly/src/sample_data/c1.graph.out
SECTION
==================
buildNewGraph
========================

buildNewGraphFirstLetter: Butterfly/Butterfly/src/sample_data/c1.graph.out
KMER_SIZE=24

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[493]  Graph is built
NODE_DESCR: GGCCACACGATGGCTTATCACGTC:W0(V380_D-1) Preds: [] Succ: [C:W-1(V381_D-1) ]
NODE_DESCR: C:W-1(V381_D-1) Preds: [GGCCACACGATGGCTTATCACGTC:W0(V380_D-1) ] Succ: [A:W-1(V382_D-1) ]
NODE_DESCR: A:W-1(V382_D-1) Preds: [C:W-1(V381_D-1) ] Succ: [C:W-1(V383_D-1) ]
NODE_DESCR: C:W-1(V383_D-1) Preds: [A:W-1(V382_D-1) ] Succ: [A:W-1(V384_D-1) ]
NODE_DESCR: A:W-1(V384_D-1) Preds: [C:W-1(V383_D-1) ] Succ: [T:W-1(V385_D-1) ]
NODE_DESCR: T:W-1(V385_D-1) Preds: [A:W-1(V384_D-1) ] Succ: [T:W-1(V386_D-1) ]
NODE_DESCR: T:W-1(V386_D-1) Preds: [T:W-1(V385_D-1) ] Succ: [T:W-1(V387_D-1) ]
NODE_DESCR: T:W-1(V387_D-1) Preds: [T:W-1(V386_D-1) ] Succ: [C:W-1(V388_D-1) ]
NODE_DESCR: C:W-1(V388_D-1) Preds: [T:W-1(V387_D-1) ] Succ: [T:W-1(V389_D-1) ]
NODE_DESCR: T:W-1(V389_D-1) Preds: [C:W-1(V388_D-1) ] Succ: [A:W-1(V390_D-1) ]
NODE_DESCR: A:W-1(V390_D-1) Preds: [T:W-1(V389_D-1) ] Succ: [C:W-1(V391_D-1) ]
NODE_DESCR: C:W-1(V391_D-1) Preds: [A:W-1(V390_D-1) ] Succ: [T:W-1(V392_D-1) ]
NODE_DESCR: T:W-1(V392_D-1) Preds: [C:W-1(V391_D-1) ] Succ: [G:W-1(V393_D-1) ]
NODE_DESCR: G:W-1(V393_D-1) Preds: [T:W-1(V392_D-1) ] Succ: [G:W-1(V394_D-1) ]
NODE_DESCR: G:W-1(V394_D-1) Preds: [G:W-1(V393_D-1) ] Succ: [C:W-1(V395_D-1) ]
NODE_DESCR: C:W-1(V395_D-1) Preds: [G:W-1(V394_D-1) ] Succ: [T:W-1(V396_D-1) ]
NODE_DESCR: T:W-1(V396_D-1) Preds: [C:W-1(V395_D-1) ] Succ: [A:W-1(V397_D-1) ]
NODE_DESCR: A:W-1(V397_D-1) Preds: [T:W-1(V396_D-1) ] Succ: [C:W-1(V398_D-1) ]
NODE_DESCR: C:W-1(V398_D-1) Preds: [A:W-1(V397_D-1) ] Succ: [A:W-1(V399_D-1) ]
NODE_DESCR: A:W-1(V399_D-1) Preds: [C:W-1(V398_D-1) ] Succ: [A:W-1(V400_D-1) ]
NODE_DESCR: A:W-1(V400_D-1) Preds: [A:W-1(V399_D-1) ] Succ: [A:W-1(V401_D-1) ]
NODE_DESCR: A:W-1(V401_D-1) Preds: [A:W-1(V400_D-1) ] Succ: [C:W-1(V402_D-1) ]
NODE_DESCR: C:W-1(V402_D-1) Preds: [A:W-1(V401_D-1) ] Succ: [A:W-1(V403_D-1) ]
NODE_DESCR: A:W-1(V403_D-1) Preds: [C:W-1(V402_D-1) ] Succ: [G:W-1(V404_D-1) ]
NODE_DESCR: G:W-1(V404_D-1) Preds: [A:W-1(V403_D-1) ] Succ: [A:W-1(V405_D-1) ]
NODE_DESCR: A:W-1(V405_D-1) Preds: [G:W-1(V404_D-1) ] Succ: [C:W-1(V406_D-1) ]
NODE_DESCR: C:W-1(V406_D-1) Preds: [A:W-1(V405_D-1) ] Succ: [T:W-1(V407_D-1) ]
NODE_DESCR: T:W-1(V407_D-1) Preds: [C:W-1(V406_D-1) ] Succ: [T:W-1(V408_D-1) ]
NODE_DESCR: T:W-1(V408_D-1) Preds: [T:W-1(V407_D-1) ] Succ: [C:W-1(V409_D-1) ]
NODE_DESCR: C:W-1(V409_D-1) Preds: [T:W-1(V408_D-1) ] Succ: [C:W-1(V410_D-1) ]
NODE_DESCR: C:W-1(V410_D-1) Preds: [C:W-1(V409_D-1) ] Succ: [T:W-1(V411_D-1) ]
NODE_DESCR: T:W-1(V411_D-1) Preds: [C:W-1(V410_D-1) ] Succ: [C:W-1(V412_D-1) ]
NODE_DESCR: C:W-1(V412_D-1) Preds: [T:W-1(V411_D-1) ] Succ: [A:W-1(V413_D-1) ]
NODE_DESCR: A:W-1(V413_D-1) Preds: [C:W-1(V412_D-1) ] Succ: [A:W-1(V414_D-1) ]
NODE_DESCR: A:W-1(V414_D-1) Preds: [A:W-1(V413_D-1) ] Succ: [G:W-1(V415_D-1) ]
NODE_DESCR: G:W-1(V415_D-1) Preds: [A:W-1(V414_D-1) ] Succ: [C:W-1(V416_D-1) G:W-1(V885_D-1) ]
NODE_DESCR: C:W-1(V416_D-1) Preds: [G:W-1(V415_D-1) ] Succ: [C:W-1(V417_D-1) ]
NODE_DESCR: C:W-1(V417_D-1) Preds: [C:W-1(V416_D-1) ] Succ: [T:W-1(V418_D-1) ]
NODE_DESCR: T:W-1(V418_D-1) Preds: [C:W-1(V417_D-1) ] Succ: [C:W-1(V419_D-1) ]
NODE_DESCR: C:W-1(V419_D-1) Preds: [T:W-1(V418_D-1) ] Succ: [A:W-1(V420_D-1) ]
NODE_DESCR: A:W-1(V420_D-1) Preds: [C:W-1(V419_D-1) ] Succ: [T:W-1(V421_D-1) ]
NODE_DESCR: T:W-1(V421_D-1) Preds: [A:W-1(V420_D-1) ] Succ: [C:W-1(V422_D-1) ]
NODE_DESCR: C:W-1(V422_D-1) Preds: [T:W-1(V421_D-1) ] Succ: [A:W-1(V423_D-1) ]
NODE_DESCR: A:W-1(V423_D-1) Preds: [C:W-1(V422_D-1) ] Succ: [G:W-1(V424_D-1) ]
NODE_DESCR: G:W-1(V424_D-1) Preds: [A:W-1(V423_D-1) ] Succ: [C:W-1(V425_D-1) ]
NODE_DESCR: C:W-1(V425_D-1) Preds: [G:W-1(V424_D-1) ] Succ: [A:W-1(V426_D-1) ]
NODE_DESCR: A:W-1(V426_D-1) Preds: [C:W-1(V425_D-1) ] Succ: [A:W-1(V427_D-1) ]
NODE_DESCR: A:W-1(V427_D-1) Preds: [A:W-1(V426_D-1) ] Succ: [G:W-1(V428_D-1) ]
NODE_DESCR: G:W-1(V428_D-1) Preds: [A:W-1(V427_D-1) ] Succ: [A:W-1(V429_D-1) ]
NODE_DESCR: A:W-1(V429_D-1) Preds: [G:W-1(V428_D-1) ] Succ: [A:W-1(V430_D-1) ]
NODE_DESCR: A:W-1(V430_D-1) Preds: [A:W-1(V429_D-1) ] Succ: [G:W-1(V431_D-1) ]
NODE_DESCR: G:W-1(V431_D-1) Preds: [A:W-1(V430_D-1) ] Succ: [A:W-1(V432_D-1) ]
NODE_DESCR: A:W-1(V432_D-1) Preds: [G:W-1(V431_D-1) ] Succ: [A:W-1(V433_D-1) ]
NODE_DESCR: A:W-1(V433_D-1) Preds: [A:W-1(V432_D-1) ] Succ: [A:W-1(V434_D-1) ]
NODE_DESCR: A:W-1(V434_D-1) Preds: [A:W-1(V433_D-1) ] Succ: [T:W-1(V435_D-1) ]
NODE_DESCR: T:W-1(V435_D-1) Preds: [A:W-1(V434_D-1) ] Succ: [C:W-1(V436_D-1) ]
NODE_DESCR: C:W-1(V436_D-1) Preds: [T:W-1(V435_D-1) ] Succ: [T:W-1(V437_D-1) ]
NODE_DESCR: T:W-1(V437_D-1) Preds: [C:W-1(V436_D-1) ] Succ: [T:W-1(V438_D-1) ]
NODE_DESCR: T:W-1(V438_D-1) Preds: [T:W-1(V437_D-1) ] Succ: [T:W-1(V439_D-1) ]
NODE_DESCR: T:W-1(V439_D-1) Preds: [T:W-1(V438_D-1) ] Succ: [C:W-1(V440_D-1) ]
NODE_DESCR: C:W-1(V440_D-1) Preds: [T:W-1(V439_D-1) T:W-1(V908_D-1) ] Succ: [T:W-1(V441_D-1) ]
NODE_DESCR: T:W-1(V441_D-1) Preds: [C:W-1(V440_D-1) ] Succ: [T:W-1(V442_D-1) ]
NODE_DESCR: T:W-1(V442_D-1) Preds: [T:W-1(V441_D-1) ] Succ: [T:W-1(V443_D-1) ]
NODE_DESCR: T:W-1(V443_D-1) Preds: [T:W-1(V442_D-1) ] Succ: [C:W-1(V444_D-1) ]
NODE_DESCR: C:W-1(V444_D-1) Preds: [T:W-1(V443_D-1) ] Succ: [C:W-1(V445_D-1) ]
NODE_DESCR: C:W-1(V445_D-1) Preds: [C:W-1(V444_D-1) ] Succ: [A:W-1(V446_D-1) ]
NODE_DESCR: A:W-1(V446_D-1) Preds: [C:W-1(V445_D-1) ] Succ: [A:W-1(V447_D-1) ]
NODE_DESCR: A:W-1(V447_D-1) Preds: [A:W-1(V446_D-1) ] Succ: [G:W-1(V448_D-1) ]
NODE_DESCR: G:W-1(V448_D-1) Preds: [A:W-1(V447_D-1) ] Succ: [T:W-1(V449_D-1) ]
NODE_DESCR: T:W-1(V449_D-1) Preds: [G:W-1(V448_D-1) ] Succ: [A:W-1(V450_D-1) ]
NODE_DESCR: A:W-1(V450_D-1) Preds: [T:W-1(V449_D-1) ] Succ: [G:W-1(V451_D-1) ]
NODE_DESCR: G:W-1(V451_D-1) Preds: [A:W-1(V450_D-1) A:W-1(V980_D-1) ] Succ: [T:W-1(V452_D-1) ]
NODE_DESCR: T:W-1(V452_D-1) Preds: [G:W-1(V451_D-1) ] Succ: [G:W-1(V453_D-1) ]
NODE_DESCR: G:W-1(V453_D-1) Preds: [T:W-1(V452_D-1) ] Succ: [T:W-1(V454_D-1) ]
NODE_DESCR: T:W-1(V454_D-1) Preds: [G:W-1(V453_D-1) ] Succ: [C:W-1(V455_D-1) ]
NODE_DESCR: C:W-1(V455_D-1) Preds: [T:W-1(V454_D-1) ] Succ: [T:W-1(V456_D-1) ]
NODE_DESCR: T:W-1(V456_D-1) Preds: [C:W-1(V455_D-1) ] Succ: [T:W-1(V457_D-1) ]
NODE_DESCR: T:W-1(V457_D-1) Preds: [T:W-1(V456_D-1) ] Succ: [A:W-1(V458_D-1) ]
NODE_DESCR: A:W-1(V458_D-1) Preds: [T:W-1(V457_D-1) ] Succ: [A:W-1(V459_D-1) ]
NODE_DESCR: A:W-1(V459_D-1) Preds: [A:W-1(V458_D-1) ] Succ: [C:W-1(V460_D-1) ]
NODE_DESCR: C:W-1(V460_D-1) Preds: [A:W-1(V459_D-1) ] Succ: [T:W-1(V461_D-1) ]
NODE_DESCR: T:W-1(V461_D-1) Preds: [C:W-1(V460_D-1) ] Succ: [C:W-1(V462_D-1) ]
NODE_DESCR: C:W-1(V462_D-1) Preds: [T:W-1(V461_D-1) ] Succ: [A:W-1(V463_D-1) ]
NODE_DESCR: A:W-1(V463_D-1) Preds: [C:W-1(V462_D-1) ] Succ: [G:W-1(V464_D-1) ]
NODE_DESCR: G:W-1(V464_D-1) Preds: [A:W-1(V463_D-1) ] Succ: [G:W-1(V465_D-1) ]
NODE_DESCR: G:W-1(V465_D-1) Preds: [G:W-1(V464_D-1) ] Succ: [A:W-1(V466_D-1) ]
NODE_DESCR: A:W-1(V466_D-1) Preds: [G:W-1(V465_D-1) ] Succ: [G:W-1(V467_D-1) ]
NODE_DESCR: G:W-1(V467_D-1) Preds: [A:W-1(V466_D-1) ] Succ: [A:W-1(V468_D-1) ]
NODE_DESCR: A:W-1(V468_D-1) Preds: [G:W-1(V467_D-1) ] Succ: [T:W-1(V469_D-1) ]
NODE_DESCR: T:W-1(V469_D-1) Preds: [A:W-1(V468_D-1) ] Succ: [C:W-1(V470_D-1) ]
NODE_DESCR: C:W-1(V470_D-1) Preds: [T:W-1(V469_D-1) ] Succ: [A:W-1(V471_D-1) ]
NODE_DESCR: A:W-1(V471_D-1) Preds: [C:W-1(V470_D-1) ] Succ: [T:W-1(V472_D-1) ]
NODE_DESCR: T:W-1(V472_D-1) Preds: [A:W-1(V471_D-1) ] Succ: [G:W-1(V473_D-1) ]
NODE_DESCR: G:W-1(V473_D-1) Preds: [T:W-1(V472_D-1) ] Succ: [G:W-1(V474_D-1) ]
NODE_DESCR: G:W-1(V474_D-1) Preds: [G:W-1(V473_D-1) ] Succ: [T:W-1(V475_D-1) ]
NODE_DESCR: T:W-1(V475_D-1) Preds: [G:W-1(V474_D-1) ] Succ: [A:W-1(V476_D-1) ]
NODE_DESCR: A:W-1(V476_D-1) Preds: [T:W-1(V475_D-1) ] Succ: [G:W-1(V477_D-1) ]
NODE_DESCR: G:W-1(V477_D-1) Preds: [A:W-1(V476_D-1) ] Succ: [G:W-1(V478_D-1) ]
NODE_DESCR: G:W-1(V478_D-1) Preds: [G:W-1(V477_D-1) ] Succ: [G:W-1(V479_D-1) ]
NODE_DESCR: G:W-1(V479_D-1) Preds: [G:W-1(V478_D-1) ] Succ: [A:W-1(V480_D-1) ]
NODE_DESCR: A:W-1(V480_D-1) Preds: [G:W-1(V479_D-1) ] Succ: [A:W-1(V481_D-1) ]
NODE_DESCR: A:W-1(V481_D-1) Preds: [A:W-1(V480_D-1) ] Succ: [G:W-1(V482_D-1) ]
NODE_DESCR: G:W-1(V482_D-1) Preds: [A:W-1(V481_D-1) ] Succ: [G:W-1(V483_D-1) ]
NODE_DESCR: G:W-1(V483_D-1) Preds: [G:W-1(V482_D-1) ] Succ: [G:W-1(V484_D-1) ]
NODE_DESCR: G:W-1(V484_D-1) Preds: [G:W-1(V483_D-1) ] Succ: [G:W-1(V485_D-1) ]
NODE_DESCR: G:W-1(V485_D-1) Preds: [G:W-1(V484_D-1) ] Succ: [T:W-1(V486_D-1) ]
NODE_DESCR: T:W-1(V486_D-1) Preds: [G:W-1(V485_D-1) ] Succ: [C:W-1(V487_D-1) ]
NODE_DESCR: C:W-1(V487_D-1) Preds: [T:W-1(V486_D-1) ] Succ: [A:W-1(V488_D-1) ]
NODE_DESCR: A:W-1(V488_D-1) Preds: [C:W-1(V487_D-1) ] Succ: [G:W-1(V489_D-1) ]
NODE_DESCR: G:W-1(V489_D-1) Preds: [A:W-1(V488_D-1) ] Succ: [G:W-1(V490_D-1) ]
NODE_DESCR: G:W-1(V490_D-1) Preds: [G:W-1(V489_D-1) ] Succ: [C:W-1(V491_D-1) ]
NODE_DESCR: C:W-1(V491_D-1) Preds: [G:W-1(V490_D-1) ] Succ: [C:W-1(V492_D-1) ]
NODE_DESCR: C:W-1(V492_D-1) Preds: [C:W-1(V491_D-1) ] Succ: [A:W-1(V493_D-1) ]
NODE_DESCR: A:W-1(V493_D-1) Preds: [C:W-1(V492_D-1) ] Succ: [C:W-1(V494_D-1) ]
NODE_DESCR: C:W-1(V494_D-1) Preds: [A:W-1(V493_D-1) ] Succ: [T:W-1(V495_D-1) ]
NODE_DESCR: T:W-1(V495_D-1) Preds: [C:W-1(V494_D-1) ] Succ: [T:W-1(V496_D-1) ]
NODE_DESCR: T:W-1(V496_D-1) Preds: [T:W-1(V495_D-1) ] Succ: [C:W-1(V497_D-1) ]
NODE_DESCR: C:W-1(V497_D-1) Preds: [T:W-1(V496_D-1) ] Succ: [A:W-1(V498_D-1) ]
NODE_DESCR: A:W-1(V498_D-1) Preds: [C:W-1(V497_D-1) ] Succ: [C:W-1(V499_D-1) ]
NODE_DESCR: C:W-1(V499_D-1) Preds: [A:W-1(V498_D-1) ] Succ: [A:W-1(V500_D-1) ]
NODE_DESCR: A:W-1(V500_D-1) Preds: [C:W-1(V499_D-1) ] Succ: [A:W-1(V501_D-1) ]
NODE_DESCR: A:W-1(V501_D-1) Preds: [A:W-1(V500_D-1) ] Succ: [G:W-1(V502_D-1) ]
NODE_DESCR: G:W-1(V502_D-1) Preds: [A:W-1(V501_D-1) ] Succ: [G:W-1(V503_D-1) ]
NODE_DESCR: G:W-1(V503_D-1) Preds: [G:W-1(V502_D-1) ] Succ: [A:W-1(V504_D-1) ]
NODE_DESCR: A:W-1(V504_D-1) Preds: [G:W-1(V503_D-1) ] Succ: [G:W-1(V505_D-1) ]
NODE_DESCR: G:W-1(V505_D-1) Preds: [A:W-1(V504_D-1) ] Succ: [C:W-1(V506_D-1) ]
NODE_DESCR: C:W-1(V506_D-1) Preds: [G:W-1(V505_D-1) ] Succ: [A:W-1(V507_D-1) ]
NODE_DESCR: A:W-1(V507_D-1) Preds: [C:W-1(V506_D-1) ] Succ: [G:W-1(V508_D-1) ]
NODE_DESCR: G:W-1(V508_D-1) Preds: [A:W-1(V507_D-1) ] Succ: [A:W-1(V509_D-1) ]
NODE_DESCR: A:W-1(V509_D-1) Preds: [G:W-1(V508_D-1) ] Succ: [G:W-1(V510_D-1) ]
NODE_DESCR: G:W-1(V510_D-1) Preds: [A:W-1(V509_D-1) ] Succ: [T:W-1(V511_D-1) ]
NODE_DESCR: T:W-1(V511_D-1) Preds: [G:W-1(V510_D-1) ] Succ: [T:W-1(V512_D-1) ]
NODE_DESCR: T:W-1(V512_D-1) Preds: [T:W-1(V511_D-1) ] Succ: [A:W-1(V513_D-1) ]
NODE_DESCR: A:W-1(V513_D-1) Preds: [T:W-1(V512_D-1) ] Succ: [G:W-1(V514_D-1) ]
NODE_DESCR: G:W-1(V514_D-1) Preds: [A:W-1(V513_D-1) ] Succ: [G:W-1(V515_D-1) ]
NODE_DESCR: G:W-1(V515_D-1) Preds: [G:W-1(V514_D-1) ] Succ: [A:W-1(V516_D-1) ]
NODE_DESCR: A:W-1(V516_D-1) Preds: [G:W-1(V515_D-1) ] Succ: [A:W-1(V517_D-1) ]
NODE_DESCR: A:W-1(V517_D-1) Preds: [A:W-1(V516_D-1) ] Succ: [G:W-1(V518_D-1) ]
NODE_DESCR: G:W-1(V518_D-1) Preds: [A:W-1(V517_D-1) ] Succ: [C:W-1(V519_D-1) ]
NODE_DESCR: C:W-1(V519_D-1) Preds: [G:W-1(V518_D-1) ] Succ: [T:W-1(V520_D-1) ]
NODE_DESCR: T:W-1(V520_D-1) Preds: [C:W-1(V519_D-1) ] Succ: [C:W-1(V521_D-1) ]
NODE_DESCR: C:W-1(V521_D-1) Preds: [T:W-1(V520_D-1) ] Succ: [C:W-1(V522_D-1) ]
NODE_DESCR: C:W-1(V522_D-1) Preds: [C:W-1(V521_D-1) ] Succ: [C:W-1(V523_D-1) ]
NODE_DESCR: C:W-1(V523_D-1) Preds: [C:W-1(V522_D-1) ] Succ: [T:W-1(V524_D-1) ]
NODE_DESCR: T:W-1(V524_D-1) Preds: [C:W-1(V523_D-1) ] Succ: [G:W-1(V525_D-1) C:W-1(V813_D-1) ]
NODE_DESCR: G:W-1(V525_D-1) Preds: [T:W-1(V524_D-1) ] Succ: [A:W-1(V526_D-1) ]
NODE_DESCR: A:W-1(V526_D-1) Preds: [G:W-1(V525_D-1) ] Succ: [G:W-1(V527_D-1) ]
NODE_DESCR: G:W-1(V527_D-1) Preds: [A:W-1(V526_D-1) ] Succ: [C:W-1(V528_D-1) ]
NODE_DESCR: C:W-1(V528_D-1) Preds: [G:W-1(V527_D-1) ] Succ: [A:W-1(V529_D-1) ]
NODE_DESCR: A:W-1(V529_D-1) Preds: [C:W-1(V528_D-1) ] Succ: [C:W-1(V530_D-1) ]
NODE_DESCR: C:W-1(V530_D-1) Preds: [A:W-1(V529_D-1) ] Succ: [T:W-1(V531_D-1) ]
NODE_DESCR: T:W-1(V531_D-1) Preds: [C:W-1(V530_D-1) ] Succ: [C:W-1(V532_D-1) ]
NODE_DESCR: C:W-1(V532_D-1) Preds: [T:W-1(V531_D-1) ] Succ: [T:W-1(V533_D-1) ]
NODE_DESCR: T:W-1(V533_D-1) Preds: [C:W-1(V532_D-1) ] Succ: [G:W-1(V534_D-1) ]
NODE_DESCR: G:W-1(V534_D-1) Preds: [T:W-1(V533_D-1) ] Succ: [A:W-1(V535_D-1) ]
NODE_DESCR: A:W-1(V535_D-1) Preds: [G:W-1(V534_D-1) ] Succ: [A:W-1(V536_D-1) ]
NODE_DESCR: A:W-1(V536_D-1) Preds: [A:W-1(V535_D-1) ] Succ: [C:W-1(V537_D-1) ]
NODE_DESCR: C:W-1(V537_D-1) Preds: [A:W-1(V536_D-1) ] Succ: [C:W-1(V538_D-1) ]
NODE_DESCR: C:W-1(V538_D-1) Preds: [C:W-1(V537_D-1) ] Succ: [C:W-1(V539_D-1) ]
NODE_DESCR: C:W-1(V539_D-1) Preds: [C:W-1(V538_D-1) ] Succ: [T:W-1(V540_D-1) ]
NODE_DESCR: T:W-1(V540_D-1) Preds: [C:W-1(V539_D-1) ] Succ: [G:W-1(V541_D-1) ]
NODE_DESCR: G:W-1(V541_D-1) Preds: [T:W-1(V540_D-1) ] Succ: [T:W-1(V542_D-1) ]
NODE_DESCR: T:W-1(V542_D-1) Preds: [G:W-1(V541_D-1) ] Succ: [G:W-1(V543_D-1) ]
NODE_DESCR: G:W-1(V543_D-1) Preds: [T:W-1(V542_D-1) ] Succ: [A:W-1(V544_D-1) ]
NODE_DESCR: A:W-1(V544_D-1) Preds: [G:W-1(V543_D-1) ] Succ: [G:W-1(V545_D-1) ]
NODE_DESCR: G:W-1(V545_D-1) Preds: [A:W-1(V544_D-1) ] Succ: [G:W-1(V546_D-1) ]
NODE_DESCR: G:W-1(V546_D-1) Preds: [G:W-1(V545_D-1) ] Succ: [C:W-1(V547_D-1) ]
NODE_DESCR: C:W-1(V547_D-1) Preds: [G:W-1(V546_D-1) ] Succ: [A:W-1(V548_D-1) ]
NODE_DESCR: A:W-1(V548_D-1) Preds: [C:W-1(V547_D-1) ] Succ: [A:W-1(V549_D-1) ]
NODE_DESCR: A:W-1(V549_D-1) Preds: [A:W-1(V548_D-1) A:W-1(V836_D-1) ] Succ: [G:W-1(V550_D-1) ]
NODE_DESCR: G:W-1(V550_D-1) Preds: [A:W-1(V549_D-1) ] Succ: [T:W-1(V551_D-1) ]
NODE_DESCR: T:W-1(V551_D-1) Preds: [G:W-1(V550_D-1) ] Succ: [C:W-1(V552_D-1) ]
NODE_DESCR: C:W-1(V552_D-1) Preds: [T:W-1(V551_D-1) ] Succ: [C:W-1(V553_D-1) ]
NODE_DESCR: C:W-1(V553_D-1) Preds: [C:W-1(V552_D-1) ] Succ: [A:W-1(V554_D-1) ]
NODE_DESCR: A:W-1(V554_D-1) Preds: [C:W-1(V553_D-1) ] Succ: [C:W-1(V555_D-1) ]
NODE_DESCR: C:W-1(V555_D-1) Preds: [A:W-1(V554_D-1) ] Succ: [C:W-1(V556_D-1) ]
NODE_DESCR: C:W-1(V556_D-1) Preds: [C:W-1(V555_D-1) ] Succ: [A:W-1(V557_D-1) ]
NODE_DESCR: A:W-1(V557_D-1) Preds: [C:W-1(V556_D-1) ] Succ: [C:W-1(V558_D-1) ]
NODE_DESCR: C:W-1(V558_D-1) Preds: [A:W-1(V557_D-1) ] Succ: [C:W-1(V559_D-1) ]
NODE_DESCR: C:W-1(V559_D-1) Preds: [C:W-1(V558_D-1) ] Succ: [A:W-1(V560_D-1) ]
NODE_DESCR: A:W-1(V560_D-1) Preds: [C:W-1(V559_D-1) ] Succ: [G:W-1(V561_D-1) ]
NODE_DESCR: G:W-1(V561_D-1) Preds: [A:W-1(V560_D-1) ] Succ: [C:W-1(V562_D-1) ]
NODE_DESCR: C:W-1(V562_D-1) Preds: [G:W-1(V561_D-1) ] Succ: [G:W-1(V563_D-1) ]
NODE_DESCR: G:W-1(V563_D-1) Preds: [C:W-1(V562_D-1) ] Succ: [T:W-1(V564_D-1) ]
NODE_DESCR: T:W-1(V564_D-1) Preds: [G:W-1(V563_D-1) ] Succ: [A:W-1(V565_D-1) ]
NODE_DESCR: A:W-1(V565_D-1) Preds: [T:W-1(V564_D-1) ] Succ: [T:W-1(V566_D-1) ]
NODE_DESCR: T:W-1(V566_D-1) Preds: [A:W-1(V565_D-1) ] Succ: [C:W-1(V567_D-1) ]
NODE_DESCR: C:W-1(V567_D-1) Preds: [T:W-1(V566_D-1) ] Succ: [T:W-1(V568_D-1) ]
NODE_DESCR: T:W-1(V568_D-1) Preds: [C:W-1(V567_D-1) ] Succ: [A:W-1(V569_D-1) ]
NODE_DESCR: A:W-1(V569_D-1) Preds: [T:W-1(V568_D-1) ] Succ: [G:W-1(V570_D-1) ]
NODE_DESCR: G:W-1(V570_D-1) Preds: [A:W-1(V569_D-1) ] Succ: [A:W-1(V571_D-1) ]
NODE_DESCR: A:W-1(V571_D-1) Preds: [G:W-1(V570_D-1) ] Succ: [C:W-1(V572_D-1) ]
NODE_DESCR: C:W-1(V572_D-1) Preds: [A:W-1(V571_D-1) ] Succ: [C:W-1(V573_D-1) ]
NODE_DESCR: C:W-1(V573_D-1) Preds: [C:W-1(V572_D-1) ] Succ: [C:W-1(V574_D-1) ]
NODE_DESCR: C:W-1(V574_D-1) Preds: [C:W-1(V573_D-1) ] Succ: [A:W-1(V575_D-1) ]
NODE_DESCR: A:W-1(V575_D-1) Preds: [C:W-1(V574_D-1) ] Succ: [G:W-1(V576_D-1) ]
NODE_DESCR: G:W-1(V576_D-1) Preds: [A:W-1(V575_D-1) ] Succ: [G:W-1(V577_D-1) ]
NODE_DESCR: G:W-1(V577_D-1) Preds: [G:W-1(V576_D-1) ] Succ: [C:W-1(V578_D-1) ]
NODE_DESCR: C:W-1(V578_D-1) Preds: [G:W-1(V577_D-1) ] Succ: [C:W-1(V579_D-1) ]
NODE_DESCR: C:W-1(V579_D-1) Preds: [C:W-1(V578_D-1) ] Succ: [A:W-1(V580_D-1) ]
NODE_DESCR: A:W-1(V580_D-1) Preds: [C:W-1(V579_D-1) ] Succ: [T:W-1(V581_D-1) ]
NODE_DESCR: T:W-1(V581_D-1) Preds: [A:W-1(V580_D-1) ] Succ: [C:W-1(V582_D-1) ]
NODE_DESCR: C:W-1(V582_D-1) Preds: [T:W-1(V581_D-1) ] Succ: [T:W-1(V583_D-1) ]
NODE_DESCR: T:W-1(V583_D-1) Preds: [C:W-1(V582_D-1) ] Succ: [A:W-1(V584_D-1) ]
NODE_DESCR: A:W-1(V584_D-1) Preds: [T:W-1(V583_D-1) ] Succ: [A:W-1(V585_D-1) ]
NODE_DESCR: A:W-1(V585_D-1) Preds: [A:W-1(V584_D-1) ] Succ: [T:W-1(V586_D-1) ]
NODE_DESCR: T:W-1(V586_D-1) Preds: [A:W-1(V585_D-1) ] Succ: [A:W-1(V587_D-1) ]
NODE_DESCR: A:W-1(V587_D-1) Preds: [T:W-1(V586_D-1) ] Succ: [A:W-1(V588_D-1) ]
NODE_DESCR: A:W-1(V588_D-1) Preds: [A:W-1(V587_D-1) ] Succ: [A:W-1(V589_D-1) ]
NODE_DESCR: A:W-1(V589_D-1) Preds: [A:W-1(V588_D-1) ] Succ: [G:W-1(V590_D-1) ]
NODE_DESCR: G:W-1(V590_D-1) Preds: [A:W-1(V589_D-1) ] Succ: [G:W-1(V591_D-1) ]
NODE_DESCR: G:W-1(V591_D-1) Preds: [G:W-1(V590_D-1) ] Succ: [A:W-1(V592_D-1) ]
NODE_DESCR: A:W-1(V592_D-1) Preds: [G:W-1(V591_D-1) ] Succ: [A:W-1(V593_D-1) ]
NODE_DESCR: A:W-1(V593_D-1) Preds: [A:W-1(V592_D-1) ] Succ: [A:W-1(V594_D-1) ]
NODE_DESCR: A:W-1(V594_D-1) Preds: [A:W-1(V593_D-1) ] Succ: [A:W-1(V595_D-1) ]
NODE_DESCR: A:W-1(V595_D-1) Preds: [A:W-1(V594_D-1) ] Succ: [C:W-1(V596_D-1) ]
NODE_DESCR: C:W-1(V596_D-1) Preds: [A:W-1(V595_D-1) ] Succ: [T:W-1(V597_D-1) ]
NODE_DESCR: T:W-1(V597_D-1) Preds: [C:W-1(V596_D-1) ] Succ: [G:W-1(V598_D-1) ]
NODE_DESCR: G:W-1(V598_D-1) Preds: [T:W-1(V597_D-1) ] Succ: [C:W-1(V599_D-1) ]
NODE_DESCR: C:W-1(V599_D-1) Preds: [G:W-1(V598_D-1) ] Succ: [A:W-1(V600_D-1) ]
NODE_DESCR: A:W-1(V600_D-1) Preds: [C:W-1(V599_D-1) ] Succ: [T:W-1(V601_D-1) ]
NODE_DESCR: T:W-1(V601_D-1) Preds: [A:W-1(V600_D-1) ] Succ: [C:W-1(V602_D-1) ]
NODE_DESCR: C:W-1(V602_D-1) Preds: [T:W-1(V601_D-1) ] Succ: [T:W-1(V603_D-1) ]
NODE_DESCR: T:W-1(V603_D-1) Preds: [C:W-1(V602_D-1) ] Succ: [T:W-1(V604_D-1) ]
NODE_DESCR: T:W-1(V604_D-1) Preds: [T:W-1(V603_D-1) ] Succ: [T:W-1(V605_D-1) ]
NODE_DESCR: T:W-1(V605_D-1) Preds: [T:W-1(V604_D-1) ] Succ: [G:W-1(V606_D-1) ]
NODE_DESCR: G:W-1(V606_D-1) Preds: [T:W-1(V605_D-1) ] Succ: [C:W-1(V607_D-1) ]
NODE_DESCR: C:W-1(V607_D-1) Preds: [G:W-1(V606_D-1) ] Succ: [C:W-1(V608_D-1) ]
NODE_DESCR: C:W-1(V608_D-1) Preds: [C:W-1(V607_D-1) ] Succ: [C:W-1(V609_D-1) ]
NODE_DESCR: C:W-1(V609_D-1) Preds: [C:W-1(V608_D-1) ] Succ: [A:W-1(V610_D-1) ]
NODE_DESCR: A:W-1(V610_D-1) Preds: [C:W-1(V609_D-1) ] Succ: [C:W-1(V611_D-1) ]
NODE_DESCR: C:W-1(V611_D-1) Preds: [A:W-1(V610_D-1) ] Succ: [A:W-1(V612_D-1) ]
NODE_DESCR: A:W-1(V612_D-1) Preds: [C:W-1(V611_D-1) ] Succ: [T:W-1(V613_D-1) ]
NODE_DESCR: T:W-1(V613_D-1) Preds: [A:W-1(V612_D-1) ] Succ: [G:W-1(V614_D-1) ]
NODE_DESCR: G:W-1(V614_D-1) Preds: [T:W-1(V613_D-1) ] Succ: [A:W-1(V615_D-1) ]
NODE_DESCR: A:W-1(V615_D-1) Preds: [G:W-1(V614_D-1) ] Succ: [T:W-1(V616_D-1) ]
NODE_DESCR: T:W-1(V616_D-1) Preds: [A:W-1(V615_D-1) ] Succ: [G:W-1(V617_D-1) ]
NODE_DESCR: G:W-1(V617_D-1) Preds: [T:W-1(V616_D-1) ] Succ: [C:W-1(V618_D-1) ]
NODE_DESCR: C:W-1(V618_D-1) Preds: [G:W-1(V617_D-1) ] Succ: [T:W-1(V619_D-1) ]
NODE_DESCR: T:W-1(V619_D-1) Preds: [C:W-1(V618_D-1) ] Succ: [T:W-1(V620_D-1) ]
NODE_DESCR: T:W-1(V620_D-1) Preds: [T:W-1(V619_D-1) ] Succ: [G:W-1(V621_D-1) ]
NODE_DESCR: G:W-1(V621_D-1) Preds: [T:W-1(V620_D-1) ] Succ: [G:W-1(V622_D-1) ]
NODE_DESCR: G:W-1(V622_D-1) Preds: [G:W-1(V621_D-1) ] Succ: [T:W-1(V623_D-1) ]
NODE_DESCR: T:W-1(V623_D-1) Preds: [G:W-1(V622_D-1) ] Succ: [T:W-1(V624_D-1) ]
NODE_DESCR: T:W-1(V624_D-1) Preds: [T:W-1(V623_D-1) ] Succ: [A:W-1(V625_D-1) ]
NODE_DESCR: A:W-1(V625_D-1) Preds: [T:W-1(V624_D-1) ] Succ: [A:W-1(V626_D-1) ]
NODE_DESCR: A:W-1(V626_D-1) Preds: [A:W-1(V625_D-1) ] Succ: [G:W-1(V627_D-1) ]
NODE_DESCR: G:W-1(V627_D-1) Preds: [A:W-1(V626_D-1) ] Succ: [A:W-1(V628_D-1) ]
NODE_DESCR: A:W-1(V628_D-1) Preds: [G:W-1(V627_D-1) ] Succ: [C:W-1(V629_D-1) ]
NODE_DESCR: C:W-1(V629_D-1) Preds: [A:W-1(V628_D-1) ] Succ: [A:W-1(V630_D-1) ]
NODE_DESCR: A:W-1(V630_D-1) Preds: [C:W-1(V629_D-1) ] Succ: [A:W-1(V631_D-1) ]
NODE_DESCR: A:W-1(V631_D-1) Preds: [A:W-1(V630_D-1) ] Succ: [G:W-1(V632_D-1) ]
NODE_DESCR: G:W-1(V632_D-1) Preds: [A:W-1(V631_D-1) ] Succ: [G:W-1(V633_D-1) ]
NODE_DESCR: G:W-1(V633_D-1) Preds: [G:W-1(V632_D-1) ] Succ: [G:W-1(V634_D-1) ]
NODE_DESCR: G:W-1(V634_D-1) Preds: [G:W-1(V633_D-1) ] Succ: [G:W-1(V635_D-1) ]
NODE_DESCR: G:W-1(V635_D-1) Preds: [G:W-1(V634_D-1) ] Succ: [T:W-1(V636_D-1) ]
NODE_DESCR: T:W-1(V636_D-1) Preds: [G:W-1(V635_D-1) ] Succ: [T:W-1(V637_D-1) ]
NODE_DESCR: T:W-1(V637_D-1) Preds: [T:W-1(V636_D-1) ] Succ: [A:W-1(V638_D-1) ]
NODE_DESCR: A:W-1(V638_D-1) Preds: [T:W-1(V637_D-1) ] Succ: [G:W-1(V639_D-1) ]
NODE_DESCR: G:W-1(V639_D-1) Preds: [A:W-1(V638_D-1) ] Succ: [T:W-1(V640_D-1) ]
NODE_DESCR: T:W-1(V640_D-1) Preds: [G:W-1(V639_D-1) ] Succ: [G:W-1(V641_D-1) ]
NODE_DESCR: G:W-1(V641_D-1) Preds: [T:W-1(V640_D-1) ] Succ: [A:W-1(V642_D-1) ]
NODE_DESCR: A:W-1(V642_D-1) Preds: [G:W-1(V641_D-1) ] Succ: [C:W-1(V643_D-1) ]
NODE_DESCR: C:W-1(V643_D-1) Preds: [A:W-1(V642_D-1) ] Succ: [A:W-1(V644_D-1) ]
NODE_DESCR: A:W-1(V644_D-1) Preds: [C:W-1(V643_D-1) ] Succ: [A:W-1(V645_D-1) ]
NODE_DESCR: A:W-1(V645_D-1) Preds: [A:W-1(V644_D-1) ] Succ: [A:W-1(V646_D-1) ]
NODE_DESCR: A:W-1(V646_D-1) Preds: [A:W-1(V645_D-1) ] Succ: [G:W-1(V647_D-1) ]
NODE_DESCR: G:W-1(V647_D-1) Preds: [A:W-1(V646_D-1) ] Succ: [T:W-1(V648_D-1) ]
NODE_DESCR: T:W-1(V648_D-1) Preds: [G:W-1(V647_D-1) ] Succ: [A:W-1(V649_D-1) ]
NODE_DESCR: A:W-1(V649_D-1) Preds: [T:W-1(V648_D-1) ] Succ: [A:W-1(V650_D-1) ]
NODE_DESCR: A:W-1(V650_D-1) Preds: [A:W-1(V649_D-1) ] Succ: [A:W-1(V651_D-1) ]
NODE_DESCR: A:W-1(V651_D-1) Preds: [A:W-1(V650_D-1) ] Succ: [G:W-1(V652_D-1) ]
NODE_DESCR: G:W-1(V652_D-1) Preds: [A:W-1(V651_D-1) ] Succ: [A:W-1(V653_D-1) ]
NODE_DESCR: A:W-1(V653_D-1) Preds: [G:W-1(V652_D-1) ] Succ: [G:W-1(V654_D-1) ]
NODE_DESCR: G:W-1(V654_D-1) Preds: [A:W-1(V653_D-1) ] Succ: [G:W-1(V655_D-1) ]
NODE_DESCR: G:W-1(V655_D-1) Preds: [G:W-1(V654_D-1) ] Succ: [A:W-1(V656_D-1) ]
NODE_DESCR: A:W-1(V656_D-1) Preds: [G:W-1(V655_D-1) ] Succ: [T:W-1(V657_D-1) ]
NODE_DESCR: T:W-1(V657_D-1) Preds: [A:W-1(V656_D-1) ] Succ: [G:W-1(V658_D-1) ]
NODE_DESCR: G:W-1(V658_D-1) Preds: [T:W-1(V657_D-1) ] Succ: [A:W-1(V659_D-1) ]
NODE_DESCR: A:W-1(V659_D-1) Preds: [G:W-1(V658_D-1) ] Succ: [C:W-1(V660_D-1) ]
NODE_DESCR: C:W-1(V660_D-1) Preds: [A:W-1(V659_D-1) ] Succ: [A:W-1(V661_D-1) ]
NODE_DESCR: A:W-1(V661_D-1) Preds: [C:W-1(V660_D-1) ] Succ: [G:W-1(V662_D-1) ]
NODE_DESCR: G:W-1(V662_D-1) Preds: [A:W-1(V661_D-1) ] Succ: [A:W-1(V663_D-1) ]
NODE_DESCR: A:W-1(V663_D-1) Preds: [G:W-1(V662_D-1) ] Succ: [C:W-1(V664_D-1) ]
NODE_DESCR: C:W-1(V664_D-1) Preds: [A:W-1(V663_D-1) ] Succ: [T:W-1(V665_D-1) ]
NODE_DESCR: T:W-1(V665_D-1) Preds: [C:W-1(V664_D-1) ] Succ: [C:W-1(V666_D-1) ]
NODE_DESCR: C:W-1(V666_D-1) Preds: [T:W-1(V665_D-1) ] Succ: [T:W-1(V667_D-1) ]
NODE_DESCR: T:W-1(V667_D-1) Preds: [C:W-1(V666_D-1) ] Succ: [C:W-1(V668_D-1) ]
NODE_DESCR: C:W-1(V668_D-1) Preds: [T:W-1(V667_D-1) ] Succ: [T:W-1(V669_D-1) ]
NODE_DESCR: T:W-1(V669_D-1) Preds: [C:W-1(V668_D-1) ] Succ: [A:W-1(V670_D-1) ]
NODE_DESCR: A:W-1(V670_D-1) Preds: [T:W-1(V669_D-1) ] Succ: [A:W-1(V671_D-1) ]
NODE_DESCR: A:W-1(V671_D-1) Preds: [A:W-1(V670_D-1) ] Succ: [G:W-1(V672_D-1) ]
NODE_DESCR: G:W-1(V672_D-1) Preds: [A:W-1(V671_D-1) ] Succ: [G:W-1(V673_D-1) ]
NODE_DESCR: G:W-1(V673_D-1) Preds: [G:W-1(V672_D-1) ] Succ: [G:W-1(V674_D-1) ]
NODE_DESCR: G:W-1(V674_D-1) Preds: [G:W-1(V673_D-1) ] Succ: [A:W-1(V675_D-1) ]
NODE_DESCR: A:W-1(V675_D-1) Preds: [G:W-1(V674_D-1) ] Succ: [C:W-1(V676_D-1) ]
NODE_DESCR: C:W-1(V676_D-1) Preds: [A:W-1(V675_D-1) ] Succ: [A:W-1(V677_D-1) ]
NODE_DESCR: A:W-1(V677_D-1) Preds: [C:W-1(V676_D-1) ] Succ: [T:W-1(V678_D-1) ]
NODE_DESCR: T:W-1(V678_D-1) Preds: [A:W-1(V677_D-1) ] Succ: [A:W-1(V679_D-1) ]
NODE_DESCR: A:W-1(V679_D-1) Preds: [T:W-1(V678_D-1) ] Succ: [T:W-1(V680_D-1) ]
NODE_DESCR: T:W-1(V680_D-1) Preds: [A:W-1(V679_D-1) ] Succ: [G:W-1(V681_D-1) ]
NODE_DESCR: G:W-1(V681_D-1) Preds: [T:W-1(V680_D-1) ] Succ: [G:W-1(V682_D-1) ]
NODE_DESCR: G:W-1(V682_D-1) Preds: [G:W-1(V681_D-1) ] Succ: [G:W-1(V683_D-1) ]
NODE_DESCR: G:W-1(V683_D-1) Preds: [G:W-1(V682_D-1) ] Succ: [A:W-1(V684_D-1) ]
NODE_DESCR: A:W-1(V684_D-1) Preds: [G:W-1(V683_D-1) ] Succ: [G:W-1(V685_D-1) ]
NODE_DESCR: G:W-1(V685_D-1) Preds: [A:W-1(V684_D-1) ] Succ: [C:W-1(V686_D-1) ]
NODE_DESCR: C:W-1(V686_D-1) Preds: [G:W-1(V685_D-1) ] Succ: [T:W-1(V687_D-1) ]
NODE_DESCR: T:W-1(V687_D-1) Preds: [C:W-1(V686_D-1) ] Succ: [A:W-1(V688_D-1) ]
NODE_DESCR: A:W-1(V688_D-1) Preds: [T:W-1(V687_D-1) ] Succ: [C:W-1(V689_D-1) ]
NODE_DESCR: C:W-1(V689_D-1) Preds: [A:W-1(V688_D-1) ] Succ: [A:W-1(V690_D-1) ]
NODE_DESCR: A:W-1(V690_D-1) Preds: [C:W-1(V689_D-1) ] Succ: [T:W-1(V691_D-1) ]
NODE_DESCR: T:W-1(V691_D-1) Preds: [A:W-1(V690_D-1) ] Succ: [A:W-1(V692_D-1) ]
NODE_DESCR: A:W-1(V692_D-1) Preds: [T:W-1(V691_D-1) ] Succ: [G:W-1(V693_D-1) ]
NODE_DESCR: G:W-1(V693_D-1) Preds: [A:W-1(V692_D-1) ] Succ: [C:W-1(V694_D-1) ]
NODE_DESCR: C:W-1(V694_D-1) Preds: [G:W-1(V693_D-1) ] Succ: [C:W-1(V695_D-1) ]
NODE_DESCR: C:W-1(V695_D-1) Preds: [C:W-1(V694_D-1) ] Succ: [A:W-1(V696_D-1) ]
NODE_DESCR: A:W-1(V696_D-1) Preds: [C:W-1(V695_D-1) ] Succ: [G:W-1(V697_D-1) ]
NODE_DESCR: G:W-1(V697_D-1) Preds: [A:W-1(V696_D-1) ] Succ: [C:W-1(V698_D-1) ]
NODE_DESCR: C:W-1(V698_D-1) Preds: [G:W-1(V697_D-1) ] Succ: [C:W-1(V699_D-1) ]
NODE_DESCR: C:W-1(V699_D-1) Preds: [C:W-1(V698_D-1) ] Succ: [C:W-1(V700_D-1) ]
NODE_DESCR: C:W-1(V700_D-1) Preds: [C:W-1(V699_D-1) ] Succ: [C:W-1(V701_D-1) ]
NODE_DESCR: C:W-1(V701_D-1) Preds: [C:W-1(V700_D-1) ] Succ: [G:W-1(V702_D-1) ]
NODE_DESCR: G:W-1(V702_D-1) Preds: [C:W-1(V701_D-1) ] Succ: [T:W-1(V703_D-1) ]
NODE_DESCR: T:W-1(V703_D-1) Preds: [G:W-1(V702_D-1) ] Succ: [G:W-1(V704_D-1) ]
NODE_DESCR: G:W-1(V704_D-1) Preds: [T:W-1(V703_D-1) ] Succ: [G:W-1(V705_D-1) ]
NODE_DESCR: G:W-1(V705_D-1) Preds: [G:W-1(V704_D-1) ] Succ: [A:W-1(V706_D-1) ]
NODE_DESCR: A:W-1(V706_D-1) Preds: [G:W-1(V705_D-1) ] Succ: [G:W-1(V707_D-1) ]
NODE_DESCR: G:W-1(V707_D-1) Preds: [A:W-1(V706_D-1) ] Succ: [G:W-1(V708_D-1) ]
NODE_DESCR: G:W-1(V708_D-1) Preds: [G:W-1(V707_D-1) ] Succ: [G:W-1(V709_D-1) ]
NODE_DESCR: G:W-1(V709_D-1) Preds: [G:W-1(V708_D-1) ] Succ: [A:W-1(V710_D-1) ]
NODE_DESCR: A:W-1(V710_D-1) Preds: [G:W-1(V709_D-1) ] Succ: [G:W-1(V711_D-1) ]
NODE_DESCR: G:W-1(V711_D-1) Preds: [A:W-1(V710_D-1) ] Succ: [C:W-1(V712_D-1) ]
NODE_DESCR: C:W-1(V712_D-1) Preds: [G:W-1(V711_D-1) ] Succ: [C:W-1(V713_D-1) ]
NODE_DESCR: C:W-1(V713_D-1) Preds: [C:W-1(V712_D-1) ] Succ: [A:W-1(V714_D-1) ]
NODE_DESCR: A:W-1(V714_D-1) Preds: [C:W-1(V713_D-1) ] Succ: [C:W-1(V715_D-1) ]
NODE_DESCR: C:W-1(V715_D-1) Preds: [A:W-1(V714_D-1) ] Succ: [C:W-1(V716_D-1) ]
NODE_DESCR: C:W-1(V716_D-1) Preds: [C:W-1(V715_D-1) ] Succ: [A:W-1(V717_D-1) ]
NODE_DESCR: A:W-1(V717_D-1) Preds: [C:W-1(V716_D-1) C:W-1(V812_D-1) ] Succ: [G:W-1(V718_D-1) ]
NODE_DESCR: G:W-1(V718_D-1) Preds: [A:W-1(V717_D-1) ] Succ: [C:W-1(V719_D-1) ]
NODE_DESCR: C:W-1(V719_D-1) Preds: [G:W-1(V718_D-1) ] Succ: [C:W-1(V720_D-1) ]
NODE_DESCR: C:W-1(V720_D-1) Preds: [C:W-1(V719_D-1) ] Succ: [A:W-1(V721_D-1) ]
NODE_DESCR: A:W-1(V721_D-1) Preds: [C:W-1(V720_D-1) ] Succ: [C:W-1(V722_D-1) ]
NODE_DESCR: C:W-1(V722_D-1) Preds: [A:W-1(V721_D-1) ] Succ: [A:W-1(V723_D-1) ]
NODE_DESCR: A:W-1(V723_D-1) Preds: [C:W-1(V722_D-1) ] Succ: [G:W-1(V724_D-1) ]
NODE_DESCR: G:W-1(V724_D-1) Preds: [A:W-1(V723_D-1) ] Succ: [G:W-1(V725_D-1) ]
NODE_DESCR: G:W-1(V725_D-1) Preds: [G:W-1(V724_D-1) ] Succ: [T:W-1(V726_D-1) ]
NODE_DESCR: T:W-1(V726_D-1) Preds: [G:W-1(V725_D-1) ] Succ: [A:W-1(V727_D-1) ]
NODE_DESCR: A:W-1(V727_D-1) Preds: [T:W-1(V726_D-1) ] Succ: [C:W-1(V728_D-1) ]
NODE_DESCR: C:W-1(V728_D-1) Preds: [A:W-1(V727_D-1) ] Succ: [C:W-1(V729_D-1) ]
NODE_DESCR: C:W-1(V729_D-1) Preds: [C:W-1(V728_D-1) ] Succ: [T:W-1(V730_D-1) ]
NODE_DESCR: T:W-1(V730_D-1) Preds: [C:W-1(V729_D-1) ] Succ: [G:W-1(V731_D-1) ]
NODE_DESCR: G:W-1(V731_D-1) Preds: [T:W-1(V730_D-1) ] Succ: [A:W-1(V732_D-1) ]
NODE_DESCR: A:W-1(V732_D-1) Preds: [G:W-1(V731_D-1) ] Succ: [T:W-1(V733_D-1) ]
NODE_DESCR: T:W-1(V733_D-1) Preds: [A:W-1(V732_D-1) ] Succ: [G:W-1(V734_D-1) ]
NODE_DESCR: G:W-1(V734_D-1) Preds: [T:W-1(V733_D-1) ] Succ: [G:W-1(V735_D-1) ]
NODE_DESCR: G:W-1(V735_D-1) Preds: [G:W-1(V734_D-1) ] Succ: [A:W-1(V736_D-1) ]
NODE_DESCR: A:W-1(V736_D-1) Preds: [G:W-1(V735_D-1) ] Succ: [A:W-1(V737_D-1) ]
NODE_DESCR: A:W-1(V737_D-1) Preds: [A:W-1(V736_D-1) ] Succ: [A:W-1(V738_D-1) ]
NODE_DESCR: A:W-1(V738_D-1) Preds: [A:W-1(V737_D-1) ] Succ: [T:W-1(V739_D-1) ]
NODE_DESCR: T:W-1(V739_D-1) Preds: [A:W-1(V738_D-1) ] Succ: [G:W-1(V740_D-1) ]
NODE_DESCR: G:W-1(V740_D-1) Preds: [T:W-1(V739_D-1) ] Succ: [C:W-1(V741_D-1) ]
NODE_DESCR: C:W-1(V741_D-1) Preds: [G:W-1(V740_D-1) ] Succ: [C:W-1(V742_D-1) ]
NODE_DESCR: C:W-1(V742_D-1) Preds: [C:W-1(V741_D-1) ] Succ: [G:W-1(V743_D-1) ]
NODE_DESCR: G:W-1(V743_D-1) Preds: [C:W-1(V742_D-1) ] Succ: [G:W-1(V744_D-1) ]
NODE_DESCR: G:W-1(V744_D-1) Preds: [G:W-1(V743_D-1) ] Succ: [C:W-1(V745_D-1) ]
NODE_DESCR: C:W-1(V745_D-1) Preds: [G:W-1(V744_D-1) ] Succ: [T:W-1(V746_D-1) ]
NODE_DESCR: T:W-1(V746_D-1) Preds: [C:W-1(V745_D-1) ] Succ: [C:W-1(V747_D-1) ]
NODE_DESCR: C:W-1(V747_D-1) Preds: [T:W-1(V746_D-1) ] Succ: [A:W-1(V748_D-1) ]
NODE_DESCR: A:W-1(V748_D-1) Preds: [C:W-1(V747_D-1) ] Succ: [C:W-1(V749_D-1) ]
NODE_DESCR: C:W-1(V749_D-1) Preds: [A:W-1(V748_D-1) ] Succ: [T:W-1(V750_D-1) ]
NODE_DESCR: T:W-1(V750_D-1) Preds: [C:W-1(V749_D-1) ] Succ: [T:W-1(V751_D-1) ]
NODE_DESCR: T:W-1(V751_D-1) Preds: [T:W-1(V750_D-1) ] Succ: [C:W-1(V752_D-1) ]
NODE_DESCR: C:W-1(V752_D-1) Preds: [T:W-1(V751_D-1) ] Succ: [C:W-1(V753_D-1) ]
NODE_DESCR: C:W-1(V753_D-1) Preds: [C:W-1(V752_D-1) ] Succ: [T:W-1(V754_D-1) ]
NODE_DESCR: T:W-1(V754_D-1) Preds: [C:W-1(V753_D-1) ] Succ: [G:W-1(V755_D-1) ]
NODE_DESCR: G:W-1(V755_D-1) Preds: [T:W-1(V754_D-1) ] Succ: [T:W-1(V756_D-1) ]
NODE_DESCR: T:W-1(V756_D-1) Preds: [G:W-1(V755_D-1) ] Succ: [G:W-1(V757_D-1) ]
NODE_DESCR: G:W-1(V757_D-1) Preds: [T:W-1(V756_D-1) ] Succ: [A:W-1(V758_D-1) ]
NODE_DESCR: A:W-1(V758_D-1) Preds: [G:W-1(V757_D-1) ] Succ: []
NODE_DESCR: GCTAGGGGAAATAGGGGAGCTCCA:W0(V786_D-1) Preds: [] Succ: [A:W-1(V787_D-1) ]
NODE_DESCR: A:W-1(V787_D-1) Preds: [GCTAGGGGAAATAGGGGAGCTCCA:W0(V786_D-1) ] Succ: [A:W-1(V788_D-1) ]
NODE_DESCR: A:W-1(V788_D-1) Preds: [A:W-1(V787_D-1) ] Succ: [C:W-1(V789_D-1) ]
NODE_DESCR: C:W-1(V789_D-1) Preds: [A:W-1(V788_D-1) ] Succ: [C:W-1(V790_D-1) ]
NODE_DESCR: C:W-1(V790_D-1) Preds: [C:W-1(V789_D-1) ] Succ: [C:W-1(V791_D-1) ]
NODE_DESCR: C:W-1(V791_D-1) Preds: [C:W-1(V790_D-1) ] Succ: [A:W-1(V792_D-1) ]
NODE_DESCR: A:W-1(V792_D-1) Preds: [C:W-1(V791_D-1) ] Succ: [G:W-1(V793_D-1) ]
NODE_DESCR: G:W-1(V793_D-1) Preds: [A:W-1(V792_D-1) ] Succ: [C:W-1(V794_D-1) ]
NODE_DESCR: C:W-1(V794_D-1) Preds: [G:W-1(V793_D-1) ] Succ: [C:W-1(V795_D-1) ]
NODE_DESCR: C:W-1(V795_D-1) Preds: [C:W-1(V794_D-1) ] Succ: [C:W-1(V796_D-1) ]
NODE_DESCR: C:W-1(V796_D-1) Preds: [C:W-1(V795_D-1) ] Succ: [C:W-1(V797_D-1) ]
NODE_DESCR: C:W-1(V797_D-1) Preds: [C:W-1(V796_D-1) ] Succ: [G:W-1(V798_D-1) ]
NODE_DESCR: G:W-1(V798_D-1) Preds: [C:W-1(V797_D-1) ] Succ: [T:W-1(V799_D-1) ]
NODE_DESCR: T:W-1(V799_D-1) Preds: [G:W-1(V798_D-1) ] Succ: [G:W-1(V800_D-1) ]
NODE_DESCR: G:W-1(V800_D-1) Preds: [T:W-1(V799_D-1) ] Succ: [G:W-1(V801_D-1) ]
NODE_DESCR: G:W-1(V801_D-1) Preds: [G:W-1(V800_D-1) ] Succ: [A:W-1(V802_D-1) ]
NODE_DESCR: A:W-1(V802_D-1) Preds: [G:W-1(V801_D-1) ] Succ: [G:W-1(V803_D-1) ]
NODE_DESCR: G:W-1(V803_D-1) Preds: [A:W-1(V802_D-1) ] Succ: [G:W-1(V804_D-1) ]
NODE_DESCR: G:W-1(V804_D-1) Preds: [G:W-1(V803_D-1) ] Succ: [G:W-1(V805_D-1) ]
NODE_DESCR: G:W-1(V805_D-1) Preds: [G:W-1(V804_D-1) ] Succ: [A:W-1(V806_D-1) ]
NODE_DESCR: A:W-1(V806_D-1) Preds: [G:W-1(V805_D-1) ] Succ: [G:W-1(V807_D-1) ]
NODE_DESCR: G:W-1(V807_D-1) Preds: [A:W-1(V806_D-1) ] Succ: [C:W-1(V808_D-1) ]
NODE_DESCR: C:W-1(V808_D-1) Preds: [G:W-1(V807_D-1) ] Succ: [C:W-1(V809_D-1) ]
NODE_DESCR: C:W-1(V809_D-1) Preds: [C:W-1(V808_D-1) ] Succ: [A:W-1(V810_D-1) ]
NODE_DESCR: A:W-1(V810_D-1) Preds: [C:W-1(V809_D-1) ] Succ: [C:W-1(V811_D-1) ]
NODE_DESCR: C:W-1(V811_D-1) Preds: [A:W-1(V810_D-1) ] Succ: [C:W-1(V812_D-1) ]
NODE_DESCR: C:W-1(V812_D-1) Preds: [C:W-1(V811_D-1) ] Succ: [A:W-1(V717_D-1) ]
NODE_DESCR: C:W-1(V813_D-1) Preds: [T:W-1(V524_D-1) ] Succ: [A:W-1(V814_D-1) ]
NODE_DESCR: A:W-1(V814_D-1) Preds: [C:W-1(V813_D-1) ] Succ: [G:W-1(V815_D-1) ]
NODE_DESCR: G:W-1(V815_D-1) Preds: [A:W-1(V814_D-1) ] Succ: [C:W-1(V816_D-1) ]
NODE_DESCR: C:W-1(V816_D-1) Preds: [G:W-1(V815_D-1) ] Succ: [A:W-1(V817_D-1) ]
NODE_DESCR: A:W-1(V817_D-1) Preds: [C:W-1(V816_D-1) ] Succ: [C:W-1(V818_D-1) ]
NODE_DESCR: C:W-1(V818_D-1) Preds: [A:W-1(V817_D-1) ] Succ: [T:W-1(V819_D-1) ]
NODE_DESCR: T:W-1(V819_D-1) Preds: [C:W-1(V818_D-1) ] Succ: [C:W-1(V820_D-1) ]
NODE_DESCR: C:W-1(V820_D-1) Preds: [T:W-1(V819_D-1) ] Succ: [T:W-1(V821_D-1) ]
NODE_DESCR: T:W-1(V821_D-1) Preds: [C:W-1(V820_D-1) ] Succ: [G:W-1(V822_D-1) ]
NODE_DESCR: G:W-1(V822_D-1) Preds: [T:W-1(V821_D-1) ] Succ: [A:W-1(V823_D-1) ]
NODE_DESCR: A:W-1(V823_D-1) Preds: [G:W-1(V822_D-1) ] Succ: [A:W-1(V824_D-1) ]
NODE_DESCR: A:W-1(V824_D-1) Preds: [A:W-1(V823_D-1) ] Succ: [C:W-1(V825_D-1) ]
NODE_DESCR: C:W-1(V825_D-1) Preds: [A:W-1(V824_D-1) ] Succ: [C:W-1(V826_D-1) ]
NODE_DESCR: C:W-1(V826_D-1) Preds: [C:W-1(V825_D-1) ] Succ: [C:W-1(V827_D-1) ]
NODE_DESCR: C:W-1(V827_D-1) Preds: [C:W-1(V826_D-1) ] Succ: [T:W-1(V828_D-1) ]
NODE_DESCR: T:W-1(V828_D-1) Preds: [C:W-1(V827_D-1) ] Succ: [G:W-1(V829_D-1) ]
NODE_DESCR: G:W-1(V829_D-1) Preds: [T:W-1(V828_D-1) ] Succ: [T:W-1(V830_D-1) ]
NODE_DESCR: T:W-1(V830_D-1) Preds: [G:W-1(V829_D-1) ] Succ: [G:W-1(V831_D-1) ]
NODE_DESCR: G:W-1(V831_D-1) Preds: [T:W-1(V830_D-1) ] Succ: [A:W-1(V832_D-1) ]
NODE_DESCR: A:W-1(V832_D-1) Preds: [G:W-1(V831_D-1) ] Succ: [G:W-1(V833_D-1) ]
NODE_DESCR: G:W-1(V833_D-1) Preds: [A:W-1(V832_D-1) ] Succ: [G:W-1(V834_D-1) ]
NODE_DESCR: G:W-1(V834_D-1) Preds: [G:W-1(V833_D-1) ] Succ: [C:W-1(V835_D-1) ]
NODE_DESCR: C:W-1(V835_D-1) Preds: [G:W-1(V834_D-1) ] Succ: [A:W-1(V836_D-1) ]
NODE_DESCR: A:W-1(V836_D-1) Preds: [C:W-1(V835_D-1) ] Succ: [A:W-1(V549_D-1) ]
NODE_DESCR: G:W-1(V885_D-1) Preds: [G:W-1(V415_D-1) ] Succ: [C:W-1(V886_D-1) ]
NODE_DESCR: C:W-1(V886_D-1) Preds: [G:W-1(V885_D-1) ] Succ: [T:W-1(V887_D-1) ]
NODE_DESCR: T:W-1(V887_D-1) Preds: [C:W-1(V886_D-1) ] Succ: [C:W-1(V888_D-1) ]
NODE_DESCR: C:W-1(V888_D-1) Preds: [T:W-1(V887_D-1) ] Succ: [A:W-1(V889_D-1) ]
NODE_DESCR: A:W-1(V889_D-1) Preds: [C:W-1(V888_D-1) ] Succ: [T:W-1(V890_D-1) ]
NODE_DESCR: T:W-1(V890_D-1) Preds: [A:W-1(V889_D-1) ] Succ: [C:W-1(V891_D-1) ]
NODE_DESCR: C:W-1(V891_D-1) Preds: [T:W-1(V890_D-1) ] Succ: [A:W-1(V892_D-1) ]
NODE_DESCR: A:W-1(V892_D-1) Preds: [C:W-1(V891_D-1) ] Succ: [G:W-1(V893_D-1) ]
NODE_DESCR: G:W-1(V893_D-1) Preds: [A:W-1(V892_D-1) ] Succ: [C:W-1(V894_D-1) ]
NODE_DESCR: C:W-1(V894_D-1) Preds: [G:W-1(V893_D-1) ] Succ: [A:W-1(V895_D-1) ]
NODE_DESCR: A:W-1(V895_D-1) Preds: [C:W-1(V894_D-1) ] Succ: [A:W-1(V896_D-1) ]
NODE_DESCR: A:W-1(V896_D-1) Preds: [A:W-1(V895_D-1) ] Succ: [G:W-1(V897_D-1) ]
NODE_DESCR: G:W-1(V897_D-1) Preds: [A:W-1(V896_D-1) ] Succ: [A:W-1(V898_D-1) ]
NODE_DESCR: A:W-1(V898_D-1) Preds: [G:W-1(V897_D-1) ] Succ: [A:W-1(V899_D-1) ]
NODE_DESCR: A:W-1(V899_D-1) Preds: [A:W-1(V898_D-1) ] Succ: [G:W-1(V900_D-1) ]
NODE_DESCR: G:W-1(V900_D-1) Preds: [A:W-1(V899_D-1) ] Succ: [A:W-1(V901_D-1) ]
NODE_DESCR: A:W-1(V901_D-1) Preds: [G:W-1(V900_D-1) ] Succ: [A:W-1(V902_D-1) ]
NODE_DESCR: A:W-1(V902_D-1) Preds: [A:W-1(V901_D-1) ] Succ: [A:W-1(V903_D-1) ]
NODE_DESCR: A:W-1(V903_D-1) Preds: [A:W-1(V902_D-1) ] Succ: [T:W-1(V904_D-1) ]
NODE_DESCR: T:W-1(V904_D-1) Preds: [A:W-1(V903_D-1) ] Succ: [C:W-1(V905_D-1) ]
NODE_DESCR: C:W-1(V905_D-1) Preds: [T:W-1(V904_D-1) ] Succ: [T:W-1(V906_D-1) ]
NODE_DESCR: T:W-1(V906_D-1) Preds: [C:W-1(V905_D-1) ] Succ: [T:W-1(V907_D-1) ]
NODE_DESCR: T:W-1(V907_D-1) Preds: [T:W-1(V906_D-1) ] Succ: [T:W-1(V908_D-1) ]
NODE_DESCR: T:W-1(V908_D-1) Preds: [T:W-1(V907_D-1) ] Succ: [C:W-1(V440_D-1) ]
NODE_DESCR: AGAATACAAAATGCCTTCCTCCAG:W0(V945_D-1) Preds: [] Succ: [C:W-1(V946_D-1) ]
NODE_DESCR: C:W-1(V946_D-1) Preds: [AGAATACAAAATGCCTTCCTCCAG:W0(V945_D-1) ] Succ: [C:W-1(V947_D-1) ]
NODE_DESCR: C:W-1(V947_D-1) Preds: [C:W-1(V946_D-1) ] Succ: [T:W-1(V948_D-1) ]
NODE_DESCR: T:W-1(V948_D-1) Preds: [C:W-1(V947_D-1) ] Succ: [C:W-1(V949_D-1) ]
NODE_DESCR: C:W-1(V949_D-1) Preds: [T:W-1(V948_D-1) ] Succ: [A:W-1(V950_D-1) ]
NODE_DESCR: A:W-1(V950_D-1) Preds: [C:W-1(V949_D-1) ] Succ: [T:W-1(V951_D-1) ]
NODE_DESCR: T:W-1(V951_D-1) Preds: [A:W-1(V950_D-1) ] Succ: [C:W-1(V952_D-1) ]
NODE_DESCR: C:W-1(V952_D-1) Preds: [T:W-1(V951_D-1) ] Succ: [A:W-1(V953_D-1) ]
NODE_DESCR: A:W-1(V953_D-1) Preds: [C:W-1(V952_D-1) ] Succ: [G:W-1(V954_D-1) ]
NODE_DESCR: G:W-1(V954_D-1) Preds: [A:W-1(V953_D-1) ] Succ: [C:W-1(V955_D-1) ]
NODE_DESCR: C:W-1(V955_D-1) Preds: [G:W-1(V954_D-1) ] Succ: [A:W-1(V956_D-1) ]
NODE_DESCR: A:W-1(V956_D-1) Preds: [C:W-1(V955_D-1) ] Succ: [G:W-1(V957_D-1) ]
NODE_DESCR: G:W-1(V957_D-1) Preds: [A:W-1(V956_D-1) ] Succ: [G:W-1(V958_D-1) ]
NODE_DESCR: G:W-1(V958_D-1) Preds: [G:W-1(V957_D-1) ] Succ: [A:W-1(V959_D-1) ]
NODE_DESCR: A:W-1(V959_D-1) Preds: [G:W-1(V958_D-1) ] Succ: [A:W-1(V960_D-1) ]
NODE_DESCR: A:W-1(V960_D-1) Preds: [A:W-1(V959_D-1) ] Succ: [G:W-1(V961_D-1) ]
NODE_DESCR: G:W-1(V961_D-1) Preds: [A:W-1(V960_D-1) ] Succ: [A:W-1(V962_D-1) ]
NODE_DESCR: A:W-1(V962_D-1) Preds: [G:W-1(V961_D-1) ] Succ: [A:W-1(V963_D-1) ]
NODE_DESCR: A:W-1(V963_D-1) Preds: [A:W-1(V962_D-1) ] Succ: [A:W-1(V964_D-1) ]
NODE_DESCR: A:W-1(V964_D-1) Preds: [A:W-1(V963_D-1) ] Succ: [T:W-1(V965_D-1) ]
NODE_DESCR: T:W-1(V965_D-1) Preds: [A:W-1(V964_D-1) ] Succ: [C:W-1(V966_D-1) ]
NODE_DESCR: C:W-1(V966_D-1) Preds: [T:W-1(V965_D-1) ] Succ: [T:W-1(V967_D-1) ]
NODE_DESCR: T:W-1(V967_D-1) Preds: [C:W-1(V966_D-1) ] Succ: [T:W-1(V968_D-1) ]
NODE_DESCR: T:W-1(V968_D-1) Preds: [T:W-1(V967_D-1) ] Succ: [T:W-1(V969_D-1) ]
NODE_DESCR: T:W-1(V969_D-1) Preds: [T:W-1(V968_D-1) ] Succ: [C:W-1(V970_D-1) ]
NODE_DESCR: C:W-1(V970_D-1) Preds: [T:W-1(V969_D-1) ] Succ: [T:W-1(V971_D-1) ]
NODE_DESCR: T:W-1(V971_D-1) Preds: [C:W-1(V970_D-1) ] Succ: [T:W-1(V972_D-1) ]
NODE_DESCR: T:W-1(V972_D-1) Preds: [T:W-1(V971_D-1) ] Succ: [T:W-1(V973_D-1) ]
NODE_DESCR: T:W-1(V973_D-1) Preds: [T:W-1(V972_D-1) ] Succ: [C:W-1(V974_D-1) ]
NODE_DESCR: C:W-1(V974_D-1) Preds: [T:W-1(V973_D-1) ] Succ: [C:W-1(V975_D-1) ]
NODE_DESCR: C:W-1(V975_D-1) Preds: [C:W-1(V974_D-1) ] Succ: [A:W-1(V976_D-1) ]
NODE_DESCR: A:W-1(V976_D-1) Preds: [C:W-1(V975_D-1) ] Succ: [A:W-1(V977_D-1) ]
NODE_DESCR: A:W-1(V977_D-1) Preds: [A:W-1(V976_D-1) ] Succ: [G:W-1(V978_D-1) ]
NODE_DESCR: G:W-1(V978_D-1) Preds: [A:W-1(V977_D-1) ] Succ: [T:W-1(V979_D-1) ]
NODE_DESCR: T:W-1(V979_D-1) Preds: [G:W-1(V978_D-1) ] Succ: [A:W-1(V980_D-1) ]
NODE_DESCR: A:W-1(V980_D-1) Preds: [T:W-1(V979_D-1) ] Succ: [G:W-1(V451_D-1) ]
ORIGINAL GRAPH NODE: GGCCACACGATGGCTTATCACGTC with ID: 380
ORIGINAL GRAPH NODE: GCCACACGATGGCTTATCACGTCC with ID: 381
ORIGINAL GRAPH NODE: CCACACGATGGCTTATCACGTCCA with ID: 382
ORIGINAL GRAPH NODE: CACACGATGGCTTATCACGTCCAC with ID: 383
ORIGINAL GRAPH NODE: ACACGATGGCTTATCACGTCCACA with ID: 384
ORIGINAL GRAPH NODE: CACGATGGCTTATCACGTCCACAT with ID: 385
ORIGINAL GRAPH NODE: ACGATGGCTTATCACGTCCACATT with ID: 386
ORIGINAL GRAPH NODE: CGATGGCTTATCACGTCCACATTT with ID: 387
ORIGINAL GRAPH NODE: GATGGCTTATCACGTCCACATTTC with ID: 388
ORIGINAL GRAPH NODE: ATGGCTTATCACGTCCACATTTCT with ID: 389
ORIGINAL GRAPH NODE: TGGCTTATCACGTCCACATTTCTA with ID: 390
ORIGINAL GRAPH NODE: GGCTTATCACGTCCACATTTCTAC with ID: 391
ORIGINAL GRAPH NODE: GCTTATCACGTCCACATTTCTACT with ID: 392
ORIGINAL GRAPH NODE: CTTATCACGTCCACATTTCTACTG with ID: 393
ORIGINAL GRAPH NODE: TTATCACGTCCACATTTCTACTGG with ID: 394
ORIGINAL GRAPH NODE: TATCACGTCCACATTTCTACTGGC with ID: 395
ORIGINAL GRAPH NODE: ATCACGTCCACATTTCTACTGGCT with ID: 396
ORIGINAL GRAPH NODE: TCACGTCCACATTTCTACTGGCTA with ID: 397
ORIGINAL GRAPH NODE: CACGTCCACATTTCTACTGGCTAC with ID: 398
ORIGINAL GRAPH NODE: ACGTCCACATTTCTACTGGCTACA with ID: 399
ORIGINAL GRAPH NODE: CGTCCACATTTCTACTGGCTACAA with ID: 400
ORIGINAL GRAPH NODE: GTCCACATTTCTACTGGCTACAAA with ID: 401
ORIGINAL GRAPH NODE: TCCACATTTCTACTGGCTACAAAC with ID: 402
ORIGINAL GRAPH NODE: CCACATTTCTACTGGCTACAAACA with ID: 403
ORIGINAL GRAPH NODE: CACATTTCTACTGGCTACAAACAG with ID: 404
ORIGINAL GRAPH NODE: ACATTTCTACTGGCTACAAACAGA with ID: 405
ORIGINAL GRAPH NODE: CATTTCTACTGGCTACAAACAGAC with ID: 406
ORIGINAL GRAPH NODE: ATTTCTACTGGCTACAAACAGACT with ID: 407
ORIGINAL GRAPH NODE: TTTCTACTGGCTACAAACAGACTT with ID: 408
ORIGINAL GRAPH NODE: TTCTACTGGCTACAAACAGACTTC with ID: 409
ORIGINAL GRAPH NODE: TCTACTGGCTACAAACAGACTTCC with ID: 410
ORIGINAL GRAPH NODE: CTACTGGCTACAAACAGACTTCCT with ID: 411
ORIGINAL GRAPH NODE: TACTGGCTACAAACAGACTTCCTC with ID: 412
ORIGINAL GRAPH NODE: ACTGGCTACAAACAGACTTCCTCA with ID: 413
ORIGINAL GRAPH NODE: CTGGCTACAAACAGACTTCCTCAA with ID: 414
ORIGINAL GRAPH NODE: TGGCTACAAACAGACTTCCTCAAG with ID: 415
ORIGINAL GRAPH NODE: GGCTACAAACAGACTTCCTCAAGC with ID: 416
ORIGINAL GRAPH NODE: GCTACAAACAGACTTCCTCAAGCC with ID: 417
ORIGINAL GRAPH NODE: CTACAAACAGACTTCCTCAAGCCT with ID: 418
ORIGINAL GRAPH NODE: TACAAACAGACTTCCTCAAGCCTC with ID: 419
ORIGINAL GRAPH NODE: ACAAACAGACTTCCTCAAGCCTCA with ID: 420
ORIGINAL GRAPH NODE: CAAACAGACTTCCTCAAGCCTCAT with ID: 421
ORIGINAL GRAPH NODE: AAACAGACTTCCTCAAGCCTCATC with ID: 422
ORIGINAL GRAPH NODE: AACAGACTTCCTCAAGCCTCATCA with ID: 423
ORIGINAL GRAPH NODE: ACAGACTTCCTCAAGCCTCATCAG with ID: 424
ORIGINAL GRAPH NODE: CAGACTTCCTCAAGCCTCATCAGC with ID: 425
ORIGINAL GRAPH NODE: AGACTTCCTCAAGCCTCATCAGCA with ID: 426
ORIGINAL GRAPH NODE: GACTTCCTCAAGCCTCATCAGCAA with ID: 427
ORIGINAL GRAPH NODE: ACTTCCTCAAGCCTCATCAGCAAG with ID: 428
ORIGINAL GRAPH NODE: CTTCCTCAAGCCTCATCAGCAAGA with ID: 429
ORIGINAL GRAPH NODE: TTCCTCAAGCCTCATCAGCAAGAA with ID: 430
ORIGINAL GRAPH NODE: TCCTCAAGCCTCATCAGCAAGAAG with ID: 431
ORIGINAL GRAPH NODE: CCTCAAGCCTCATCAGCAAGAAGA with ID: 432
ORIGINAL GRAPH NODE: CTCAAGCCTCATCAGCAAGAAGAA with ID: 433
ORIGINAL GRAPH NODE: TCAAGCCTCATCAGCAAGAAGAAA with ID: 434
ORIGINAL GRAPH NODE: CAAGCCTCATCAGCAAGAAGAAAT with ID: 435
ORIGINAL GRAPH NODE: AAGCCTCATCAGCAAGAAGAAATC with ID: 436
ORIGINAL GRAPH NODE: AGCCTCATCAGCAAGAAGAAATCT with ID: 437
ORIGINAL GRAPH NODE: GCCTCATCAGCAAGAAGAAATCTT with ID: 438
ORIGINAL GRAPH NODE: CCTCATCAGCAAGAAGAAATCTTT with ID: 439
ORIGINAL GRAPH NODE: CTCATCAGCAAGAAGAAATCTTTC with ID: 440
ORIGINAL GRAPH NODE: TCATCAGCAAGAAGAAATCTTTCT with ID: 441
ORIGINAL GRAPH NODE: CATCAGCAAGAAGAAATCTTTCTT with ID: 442
ORIGINAL GRAPH NODE: ATCAGCAAGAAGAAATCTTTCTTT with ID: 443
ORIGINAL GRAPH NODE: TCAGCAAGAAGAAATCTTTCTTTC with ID: 444
ORIGINAL GRAPH NODE: CAGCAAGAAGAAATCTTTCTTTCC with ID: 445
ORIGINAL GRAPH NODE: AGCAAGAAGAAATCTTTCTTTCCA with ID: 446
ORIGINAL GRAPH NODE: GCAAGAAGAAATCTTTCTTTCCAA with ID: 447
ORIGINAL GRAPH NODE: CAAGAAGAAATCTTTCTTTCCAAG with ID: 448
ORIGINAL GRAPH NODE: AAGAAGAAATCTTTCTTTCCAAGT with ID: 449
ORIGINAL GRAPH NODE: AGAAGAAATCTTTCTTTCCAAGTA with ID: 450
ORIGINAL GRAPH NODE: GAAGAAATCTTTCTTTCCAAGTAG with ID: 451
ORIGINAL GRAPH NODE: AAGAAATCTTTCTTTCCAAGTAGT with ID: 452
ORIGINAL GRAPH NODE: AGAAATCTTTCTTTCCAAGTAGTG with ID: 453
ORIGINAL GRAPH NODE: GAAATCTTTCTTTCCAAGTAGTGT with ID: 454
ORIGINAL GRAPH NODE: AAATCTTTCTTTCCAAGTAGTGTC with ID: 455
ORIGINAL GRAPH NODE: AATCTTTCTTTCCAAGTAGTGTCT with ID: 456
ORIGINAL GRAPH NODE: ATCTTTCTTTCCAAGTAGTGTCTT with ID: 457
ORIGINAL GRAPH NODE: TCTTTCTTTCCAAGTAGTGTCTTA with ID: 458
ORIGINAL GRAPH NODE: CTTTCTTTCCAAGTAGTGTCTTAA with ID: 459
ORIGINAL GRAPH NODE: TTTCTTTCCAAGTAGTGTCTTAAC with ID: 460
ORIGINAL GRAPH NODE: TTCTTTCCAAGTAGTGTCTTAACT with ID: 461
ORIGINAL GRAPH NODE: TCTTTCCAAGTAGTGTCTTAACTC with ID: 462
ORIGINAL GRAPH NODE: CTTTCCAAGTAGTGTCTTAACTCA with ID: 463
ORIGINAL GRAPH NODE: TTTCCAAGTAGTGTCTTAACTCAG with ID: 464
ORIGINAL GRAPH NODE: TTCCAAGTAGTGTCTTAACTCAGG with ID: 465
ORIGINAL GRAPH NODE: TCCAAGTAGTGTCTTAACTCAGGA with ID: 466
ORIGINAL GRAPH NODE: CCAAGTAGTGTCTTAACTCAGGAG with ID: 467
ORIGINAL GRAPH NODE: CAAGTAGTGTCTTAACTCAGGAGA with ID: 468
ORIGINAL GRAPH NODE: AAGTAGTGTCTTAACTCAGGAGAT with ID: 469
ORIGINAL GRAPH NODE: AGTAGTGTCTTAACTCAGGAGATC with ID: 470
ORIGINAL GRAPH NODE: GTAGTGTCTTAACTCAGGAGATCA with ID: 471
ORIGINAL GRAPH NODE: TAGTGTCTTAACTCAGGAGATCAT with ID: 472
ORIGINAL GRAPH NODE: AGTGTCTTAACTCAGGAGATCATG with ID: 473
ORIGINAL GRAPH NODE: GTGTCTTAACTCAGGAGATCATGG with ID: 474
ORIGINAL GRAPH NODE: TGTCTTAACTCAGGAGATCATGGT with ID: 475
ORIGINAL GRAPH NODE: GTCTTAACTCAGGAGATCATGGTA with ID: 476
ORIGINAL GRAPH NODE: TCTTAACTCAGGAGATCATGGTAG with ID: 477
ORIGINAL GRAPH NODE: CTTAACTCAGGAGATCATGGTAGG with ID: 478
ORIGINAL GRAPH NODE: TTAACTCAGGAGATCATGGTAGGG with ID: 479
ORIGINAL GRAPH NODE: TAACTCAGGAGATCATGGTAGGGA with ID: 480
ORIGINAL GRAPH NODE: AACTCAGGAGATCATGGTAGGGAA with ID: 481
ORIGINAL GRAPH NODE: ACTCAGGAGATCATGGTAGGGAAG with ID: 482
ORIGINAL GRAPH NODE: CTCAGGAGATCATGGTAGGGAAGG with ID: 483
ORIGINAL GRAPH NODE: TCAGGAGATCATGGTAGGGAAGGG with ID: 484
ORIGINAL GRAPH NODE: CAGGAGATCATGGTAGGGAAGGGG with ID: 485
ORIGINAL GRAPH NODE: AGGAGATCATGGTAGGGAAGGGGT with ID: 486
ORIGINAL GRAPH NODE: GGAGATCATGGTAGGGAAGGGGTC with ID: 487
ORIGINAL GRAPH NODE: GAGATCATGGTAGGGAAGGGGTCA with ID: 488
ORIGINAL GRAPH NODE: AGATCATGGTAGGGAAGGGGTCAG with ID: 489
ORIGINAL GRAPH NODE: GATCATGGTAGGGAAGGGGTCAGG with ID: 490
ORIGINAL GRAPH NODE: ATCATGGTAGGGAAGGGGTCAGGC with ID: 491
ORIGINAL GRAPH NODE: TCATGGTAGGGAAGGGGTCAGGCC with ID: 492
ORIGINAL GRAPH NODE: CATGGTAGGGAAGGGGTCAGGCCA with ID: 493
ORIGINAL GRAPH NODE: ATGGTAGGGAAGGGGTCAGGCCAC with ID: 494
ORIGINAL GRAPH NODE: TGGTAGGGAAGGGGTCAGGCCACT with ID: 495
ORIGINAL GRAPH NODE: GGTAGGGAAGGGGTCAGGCCACTT with ID: 496
ORIGINAL GRAPH NODE: GTAGGGAAGGGGTCAGGCCACTTC with ID: 497
ORIGINAL GRAPH NODE: TAGGGAAGGGGTCAGGCCACTTCA with ID: 498
ORIGINAL GRAPH NODE: AGGGAAGGGGTCAGGCCACTTCAC with ID: 499
ORIGINAL GRAPH NODE: GGGAAGGGGTCAGGCCACTTCACA with ID: 500
ORIGINAL GRAPH NODE: GGAAGGGGTCAGGCCACTTCACAA with ID: 501
ORIGINAL GRAPH NODE: GAAGGGGTCAGGCCACTTCACAAG with ID: 502
ORIGINAL GRAPH NODE: AAGGGGTCAGGCCACTTCACAAGG with ID: 503
ORIGINAL GRAPH NODE: AGGGGTCAGGCCACTTCACAAGGA with ID: 504
ORIGINAL GRAPH NODE: GGGGTCAGGCCACTTCACAAGGAG with ID: 505
ORIGINAL GRAPH NODE: GGGTCAGGCCACTTCACAAGGAGC with ID: 506
ORIGINAL GRAPH NODE: GGTCAGGCCACTTCACAAGGAGCA with ID: 507
ORIGINAL GRAPH NODE: GTCAGGCCACTTCACAAGGAGCAG with ID: 508
ORIGINAL GRAPH NODE: TCAGGCCACTTCACAAGGAGCAGA with ID: 509
ORIGINAL GRAPH NODE: CAGGCCACTTCACAAGGAGCAGAG with ID: 510
ORIGINAL GRAPH NODE: AGGCCACTTCACAAGGAGCAGAGT with ID: 511
ORIGINAL GRAPH NODE: GGCCACTTCACAAGGAGCAGAGTT with ID: 512
ORIGINAL GRAPH NODE: GCCACTTCACAAGGAGCAGAGTTA with ID: 513
ORIGINAL GRAPH NODE: CCACTTCACAAGGAGCAGAGTTAG with ID: 514
ORIGINAL GRAPH NODE: CACTTCACAAGGAGCAGAGTTAGG with ID: 515
ORIGINAL GRAPH NODE: ACTTCACAAGGAGCAGAGTTAGGA with ID: 516
ORIGINAL GRAPH NODE: CTTCACAAGGAGCAGAGTTAGGAA with ID: 517
ORIGINAL GRAPH NODE: TTCACAAGGAGCAGAGTTAGGAAG with ID: 518
ORIGINAL GRAPH NODE: TCACAAGGAGCAGAGTTAGGAAGC with ID: 519
ORIGINAL GRAPH NODE: CACAAGGAGCAGAGTTAGGAAGCT with ID: 520
ORIGINAL GRAPH NODE: ACAAGGAGCAGAGTTAGGAAGCTC with ID: 521
ORIGINAL GRAPH NODE: CAAGGAGCAGAGTTAGGAAGCTCC with ID: 522
ORIGINAL GRAPH NODE: AAGGAGCAGAGTTAGGAAGCTCCC with ID: 523
ORIGINAL GRAPH NODE: AGGAGCAGAGTTAGGAAGCTCCCT with ID: 524
ORIGINAL GRAPH NODE: GGAGCAGAGTTAGGAAGCTCCCTG with ID: 525
ORIGINAL GRAPH NODE: GAGCAGAGTTAGGAAGCTCCCTGA with ID: 526
ORIGINAL GRAPH NODE: AGCAGAGTTAGGAAGCTCCCTGAG with ID: 527
ORIGINAL GRAPH NODE: GCAGAGTTAGGAAGCTCCCTGAGC with ID: 528
ORIGINAL GRAPH NODE: CAGAGTTAGGAAGCTCCCTGAGCA with ID: 529
ORIGINAL GRAPH NODE: AGAGTTAGGAAGCTCCCTGAGCAC with ID: 530
ORIGINAL GRAPH NODE: GAGTTAGGAAGCTCCCTGAGCACT with ID: 531
ORIGINAL GRAPH NODE: AGTTAGGAAGCTCCCTGAGCACTC with ID: 532
ORIGINAL GRAPH NODE: GTTAGGAAGCTCCCTGAGCACTCT with ID: 533
ORIGINAL GRAPH NODE: TTAGGAAGCTCCCTGAGCACTCTG with ID: 534
ORIGINAL GRAPH NODE: TAGGAAGCTCCCTGAGCACTCTGA with ID: 535
ORIGINAL GRAPH NODE: AGGAAGCTCCCTGAGCACTCTGAA with ID: 536
ORIGINAL GRAPH NODE: GGAAGCTCCCTGAGCACTCTGAAC with ID: 537
ORIGINAL GRAPH NODE: GAAGCTCCCTGAGCACTCTGAACC with ID: 538
ORIGINAL GRAPH NODE: AAGCTCCCTGAGCACTCTGAACCC with ID: 539
ORIGINAL GRAPH NODE: AGCTCCCTGAGCACTCTGAACCCT with ID: 540
ORIGINAL GRAPH NODE: GCTCCCTGAGCACTCTGAACCCTG with ID: 541
ORIGINAL GRAPH NODE: CTCCCTGAGCACTCTGAACCCTGT with ID: 542
ORIGINAL GRAPH NODE: TCCCTGAGCACTCTGAACCCTGTG with ID: 543
ORIGINAL GRAPH NODE: CCCTGAGCACTCTGAACCCTGTGA with ID: 544
ORIGINAL GRAPH NODE: CCTGAGCACTCTGAACCCTGTGAG with ID: 545
ORIGINAL GRAPH NODE: CTGAGCACTCTGAACCCTGTGAGG with ID: 546
ORIGINAL GRAPH NODE: TGAGCACTCTGAACCCTGTGAGGC with ID: 547
ORIGINAL GRAPH NODE: GAGCACTCTGAACCCTGTGAGGCA with ID: 548
ORIGINAL GRAPH NODE: AGCACTCTGAACCCTGTGAGGCAA with ID: 549
ORIGINAL GRAPH NODE: GCACTCTGAACCCTGTGAGGCAAG with ID: 550
ORIGINAL GRAPH NODE: CACTCTGAACCCTGTGAGGCAAGT with ID: 551
ORIGINAL GRAPH NODE: ACTCTGAACCCTGTGAGGCAAGTC with ID: 552
ORIGINAL GRAPH NODE: CTCTGAACCCTGTGAGGCAAGTCC with ID: 553
ORIGINAL GRAPH NODE: TCTGAACCCTGTGAGGCAAGTCCA with ID: 554
ORIGINAL GRAPH NODE: CTGAACCCTGTGAGGCAAGTCCAC with ID: 555
ORIGINAL GRAPH NODE: TGAACCCTGTGAGGCAAGTCCACC with ID: 556
ORIGINAL GRAPH NODE: GAACCCTGTGAGGCAAGTCCACCA with ID: 557
ORIGINAL GRAPH NODE: AACCCTGTGAGGCAAGTCCACCAC with ID: 558
ORIGINAL GRAPH NODE: ACCCTGTGAGGCAAGTCCACCACC with ID: 559
ORIGINAL GRAPH NODE: CCCTGTGAGGCAAGTCCACCACCA with ID: 560
ORIGINAL GRAPH NODE: CCTGTGAGGCAAGTCCACCACCAG with ID: 561
ORIGINAL GRAPH NODE: CTGTGAGGCAAGTCCACCACCAGC with ID: 562
ORIGINAL GRAPH NODE: TGTGAGGCAAGTCCACCACCAGCG with ID: 563
ORIGINAL GRAPH NODE: GTGAGGCAAGTCCACCACCAGCGT with ID: 564
ORIGINAL GRAPH NODE: TGAGGCAAGTCCACCACCAGCGTA with ID: 565
ORIGINAL GRAPH NODE: GAGGCAAGTCCACCACCAGCGTAT with ID: 566
ORIGINAL GRAPH NODE: AGGCAAGTCCACCACCAGCGTATC with ID: 567
ORIGINAL GRAPH NODE: GGCAAGTCCACCACCAGCGTATCT with ID: 568
ORIGINAL GRAPH NODE: GCAAGTCCACCACCAGCGTATCTA with ID: 569
ORIGINAL GRAPH NODE: CAAGTCCACCACCAGCGTATCTAG with ID: 570
ORIGINAL GRAPH NODE: AAGTCCACCACCAGCGTATCTAGA with ID: 571
ORIGINAL GRAPH NODE: AGTCCACCACCAGCGTATCTAGAC with ID: 572
ORIGINAL GRAPH NODE: GTCCACCACCAGCGTATCTAGACC with ID: 573
ORIGINAL GRAPH NODE: TCCACCACCAGCGTATCTAGACCC with ID: 574
ORIGINAL GRAPH NODE: CCACCACCAGCGTATCTAGACCCA with ID: 575
ORIGINAL GRAPH NODE: CACCACCAGCGTATCTAGACCCAG with ID: 576
ORIGINAL GRAPH NODE: ACCACCAGCGTATCTAGACCCAGG with ID: 577
ORIGINAL GRAPH NODE: CCACCAGCGTATCTAGACCCAGGC with ID: 578
ORIGINAL GRAPH NODE: CACCAGCGTATCTAGACCCAGGCC with ID: 579
ORIGINAL GRAPH NODE: ACCAGCGTATCTAGACCCAGGCCA with ID: 580
ORIGINAL GRAPH NODE: CCAGCGTATCTAGACCCAGGCCAT with ID: 581
ORIGINAL GRAPH NODE: CAGCGTATCTAGACCCAGGCCATC with ID: 582
ORIGINAL GRAPH NODE: AGCGTATCTAGACCCAGGCCATCT with ID: 583
ORIGINAL GRAPH NODE: GCGTATCTAGACCCAGGCCATCTA with ID: 584
ORIGINAL GRAPH NODE: CGTATCTAGACCCAGGCCATCTAA with ID: 585
ORIGINAL GRAPH NODE: GTATCTAGACCCAGGCCATCTAAT with ID: 586
ORIGINAL GRAPH NODE: TATCTAGACCCAGGCCATCTAATA with ID: 587
ORIGINAL GRAPH NODE: ATCTAGACCCAGGCCATCTAATAA with ID: 588
ORIGINAL GRAPH NODE: TCTAGACCCAGGCCATCTAATAAA with ID: 589
ORIGINAL GRAPH NODE: CTAGACCCAGGCCATCTAATAAAG with ID: 590
ORIGINAL GRAPH NODE: TAGACCCAGGCCATCTAATAAAGG with ID: 591
ORIGINAL GRAPH NODE: AGACCCAGGCCATCTAATAAAGGA with ID: 592
ORIGINAL GRAPH NODE: GACCCAGGCCATCTAATAAAGGAA with ID: 593
ORIGINAL GRAPH NODE: ACCCAGGCCATCTAATAAAGGAAA with ID: 594
ORIGINAL GRAPH NODE: CCCAGGCCATCTAATAAAGGAAAA with ID: 595
ORIGINAL GRAPH NODE: CCAGGCCATCTAATAAAGGAAAAC with ID: 596
ORIGINAL GRAPH NODE: CAGGCCATCTAATAAAGGAAAACT with ID: 597
ORIGINAL GRAPH NODE: AGGCCATCTAATAAAGGAAAACTG with ID: 598
ORIGINAL GRAPH NODE: GGCCATCTAATAAAGGAAAACTGC with ID: 599
ORIGINAL GRAPH NODE: GCCATCTAATAAAGGAAAACTGCA with ID: 600
ORIGINAL GRAPH NODE: CCATCTAATAAAGGAAAACTGCAT with ID: 601
ORIGINAL GRAPH NODE: CATCTAATAAAGGAAAACTGCATC with ID: 602
ORIGINAL GRAPH NODE: ATCTAATAAAGGAAAACTGCATCT with ID: 603
ORIGINAL GRAPH NODE: TCTAATAAAGGAAAACTGCATCTT with ID: 604
ORIGINAL GRAPH NODE: CTAATAAAGGAAAACTGCATCTTT with ID: 605
ORIGINAL GRAPH NODE: TAATAAAGGAAAACTGCATCTTTG with ID: 606
ORIGINAL GRAPH NODE: AATAAAGGAAAACTGCATCTTTGC with ID: 607
ORIGINAL GRAPH NODE: ATAAAGGAAAACTGCATCTTTGCC with ID: 608
ORIGINAL GRAPH NODE: TAAAGGAAAACTGCATCTTTGCCC with ID: 609
ORIGINAL GRAPH NODE: AAAGGAAAACTGCATCTTTGCCCA with ID: 610
ORIGINAL GRAPH NODE: AAGGAAAACTGCATCTTTGCCCAC with ID: 611
ORIGINAL GRAPH NODE: AGGAAAACTGCATCTTTGCCCACA with ID: 612
ORIGINAL GRAPH NODE: GGAAAACTGCATCTTTGCCCACAT with ID: 613
ORIGINAL GRAPH NODE: GAAAACTGCATCTTTGCCCACATG with ID: 614
ORIGINAL GRAPH NODE: AAAACTGCATCTTTGCCCACATGA with ID: 615
ORIGINAL GRAPH NODE: AAACTGCATCTTTGCCCACATGAT with ID: 616
ORIGINAL GRAPH NODE: AACTGCATCTTTGCCCACATGATG with ID: 617
ORIGINAL GRAPH NODE: ACTGCATCTTTGCCCACATGATGC with ID: 618
ORIGINAL GRAPH NODE: CTGCATCTTTGCCCACATGATGCT with ID: 619
ORIGINAL GRAPH NODE: TGCATCTTTGCCCACATGATGCTT with ID: 620
ORIGINAL GRAPH NODE: GCATCTTTGCCCACATGATGCTTG with ID: 621
ORIGINAL GRAPH NODE: CATCTTTGCCCACATGATGCTTGG with ID: 622
ORIGINAL GRAPH NODE: ATCTTTGCCCACATGATGCTTGGT with ID: 623
ORIGINAL GRAPH NODE: TCTTTGCCCACATGATGCTTGGTT with ID: 624
ORIGINAL GRAPH NODE: CTTTGCCCACATGATGCTTGGTTA with ID: 625
ORIGINAL GRAPH NODE: TTTGCCCACATGATGCTTGGTTAA with ID: 626
ORIGINAL GRAPH NODE: TTGCCCACATGATGCTTGGTTAAG with ID: 627
ORIGINAL GRAPH NODE: TGCCCACATGATGCTTGGTTAAGA with ID: 628
ORIGINAL GRAPH NODE: GCCCACATGATGCTTGGTTAAGAC with ID: 629
ORIGINAL GRAPH NODE: CCCACATGATGCTTGGTTAAGACA with ID: 630
ORIGINAL GRAPH NODE: CCACATGATGCTTGGTTAAGACAA with ID: 631
ORIGINAL GRAPH NODE: CACATGATGCTTGGTTAAGACAAG with ID: 632
ORIGINAL GRAPH NODE: ACATGATGCTTGGTTAAGACAAGG with ID: 633
ORIGINAL GRAPH NODE: CATGATGCTTGGTTAAGACAAGGG with ID: 634
ORIGINAL GRAPH NODE: ATGATGCTTGGTTAAGACAAGGGG with ID: 635
ORIGINAL GRAPH NODE: TGATGCTTGGTTAAGACAAGGGGT with ID: 636
ORIGINAL GRAPH NODE: GATGCTTGGTTAAGACAAGGGGTT with ID: 637
ORIGINAL GRAPH NODE: ATGCTTGGTTAAGACAAGGGGTTA with ID: 638
ORIGINAL GRAPH NODE: TGCTTGGTTAAGACAAGGGGTTAG with ID: 639
ORIGINAL GRAPH NODE: GCTTGGTTAAGACAAGGGGTTAGT with ID: 640
ORIGINAL GRAPH NODE: CTTGGTTAAGACAAGGGGTTAGTG with ID: 641
ORIGINAL GRAPH NODE: TTGGTTAAGACAAGGGGTTAGTGA with ID: 642
ORIGINAL GRAPH NODE: TGGTTAAGACAAGGGGTTAGTGAC with ID: 643
ORIGINAL GRAPH NODE: GGTTAAGACAAGGGGTTAGTGACA with ID: 644
ORIGINAL GRAPH NODE: GTTAAGACAAGGGGTTAGTGACAA with ID: 645
ORIGINAL GRAPH NODE: TTAAGACAAGGGGTTAGTGACAAA with ID: 646
ORIGINAL GRAPH NODE: TAAGACAAGGGGTTAGTGACAAAG with ID: 647
ORIGINAL GRAPH NODE: AAGACAAGGGGTTAGTGACAAAGT with ID: 648
ORIGINAL GRAPH NODE: AGACAAGGGGTTAGTGACAAAGTA with ID: 649
ORIGINAL GRAPH NODE: GACAAGGGGTTAGTGACAAAGTAA with ID: 650
ORIGINAL GRAPH NODE: ACAAGGGGTTAGTGACAAAGTAAA with ID: 651
ORIGINAL GRAPH NODE: CAAGGGGTTAGTGACAAAGTAAAG with ID: 652
ORIGINAL GRAPH NODE: AAGGGGTTAGTGACAAAGTAAAGA with ID: 653
ORIGINAL GRAPH NODE: AGGGGTTAGTGACAAAGTAAAGAG with ID: 654
ORIGINAL GRAPH NODE: GGGGTTAGTGACAAAGTAAAGAGG with ID: 655
ORIGINAL GRAPH NODE: GGGTTAGTGACAAAGTAAAGAGGA with ID: 656
ORIGINAL GRAPH NODE: GGTTAGTGACAAAGTAAAGAGGAT with ID: 657
ORIGINAL GRAPH NODE: GTTAGTGACAAAGTAAAGAGGATG with ID: 658
ORIGINAL GRAPH NODE: TTAGTGACAAAGTAAAGAGGATGA with ID: 659
ORIGINAL GRAPH NODE: TAGTGACAAAGTAAAGAGGATGAC with ID: 660
ORIGINAL GRAPH NODE: AGTGACAAAGTAAAGAGGATGACA with ID: 661
ORIGINAL GRAPH NODE: GTGACAAAGTAAAGAGGATGACAG with ID: 662
ORIGINAL GRAPH NODE: TGACAAAGTAAAGAGGATGACAGA with ID: 663
ORIGINAL GRAPH NODE: GACAAAGTAAAGAGGATGACAGAC with ID: 664
ORIGINAL GRAPH NODE: ACAAAGTAAAGAGGATGACAGACT with ID: 665
ORIGINAL GRAPH NODE: CAAAGTAAAGAGGATGACAGACTC with ID: 666
ORIGINAL GRAPH NODE: AAAGTAAAGAGGATGACAGACTCT with ID: 667
ORIGINAL GRAPH NODE: AAGTAAAGAGGATGACAGACTCTC with ID: 668
ORIGINAL GRAPH NODE: AGTAAAGAGGATGACAGACTCTCT with ID: 669
ORIGINAL GRAPH NODE: GTAAAGAGGATGACAGACTCTCTA with ID: 670
ORIGINAL GRAPH NODE: TAAAGAGGATGACAGACTCTCTAA with ID: 671
ORIGINAL GRAPH NODE: AAAGAGGATGACAGACTCTCTAAG with ID: 672
ORIGINAL GRAPH NODE: AAGAGGATGACAGACTCTCTAAGG with ID: 673
ORIGINAL GRAPH NODE: AGAGGATGACAGACTCTCTAAGGG with ID: 674
ORIGINAL GRAPH NODE: GAGGATGACAGACTCTCTAAGGGA with ID: 675
ORIGINAL GRAPH NODE: AGGATGACAGACTCTCTAAGGGAC with ID: 676
ORIGINAL GRAPH NODE: GGATGACAGACTCTCTAAGGGACA with ID: 677
ORIGINAL GRAPH NODE: GATGACAGACTCTCTAAGGGACAT with ID: 678
ORIGINAL GRAPH NODE: ATGACAGACTCTCTAAGGGACATA with ID: 679
ORIGINAL GRAPH NODE: TGACAGACTCTCTAAGGGACATAT with ID: 680
ORIGINAL GRAPH NODE: GACAGACTCTCTAAGGGACATATG with ID: 681
ORIGINAL GRAPH NODE: ACAGACTCTCTAAGGGACATATGG with ID: 682
ORIGINAL GRAPH NODE: CAGACTCTCTAAGGGACATATGGG with ID: 683
ORIGINAL GRAPH NODE: AGACTCTCTAAGGGACATATGGGA with ID: 684
ORIGINAL GRAPH NODE: GACTCTCTAAGGGACATATGGGAG with ID: 685
ORIGINAL GRAPH NODE: ACTCTCTAAGGGACATATGGGAGC with ID: 686
ORIGINAL GRAPH NODE: CTCTCTAAGGGACATATGGGAGCT with ID: 687
ORIGINAL GRAPH NODE: TCTCTAAGGGACATATGGGAGCTA with ID: 688
ORIGINAL GRAPH NODE: CTCTAAGGGACATATGGGAGCTAC with ID: 689
ORIGINAL GRAPH NODE: TCTAAGGGACATATGGGAGCTACA with ID: 690
ORIGINAL GRAPH NODE: CTAAGGGACATATGGGAGCTACAT with ID: 691
ORIGINAL GRAPH NODE: TAAGGGACATATGGGAGCTACATA with ID: 692
ORIGINAL GRAPH NODE: AAGGGACATATGGGAGCTACATAG with ID: 693
ORIGINAL GRAPH NODE: AGGGACATATGGGAGCTACATAGC with ID: 694
ORIGINAL GRAPH NODE: GGGACATATGGGAGCTACATAGCC with ID: 695
ORIGINAL GRAPH NODE: GGACATATGGGAGCTACATAGCCA with ID: 696
ORIGINAL GRAPH NODE: GACATATGGGAGCTACATAGCCAG with ID: 697
ORIGINAL GRAPH NODE: ACATATGGGAGCTACATAGCCAGC with ID: 698
ORIGINAL GRAPH NODE: CATATGGGAGCTACATAGCCAGCC with ID: 699
ORIGINAL GRAPH NODE: ATATGGGAGCTACATAGCCAGCCC with ID: 700
ORIGINAL GRAPH NODE: TATGGGAGCTACATAGCCAGCCCC with ID: 701
ORIGINAL GRAPH NODE: ATGGGAGCTACATAGCCAGCCCCG with ID: 702
ORIGINAL GRAPH NODE: TGGGAGCTACATAGCCAGCCCCGT with ID: 703
ORIGINAL GRAPH NODE: GGGAGCTACATAGCCAGCCCCGTG with ID: 704
ORIGINAL GRAPH NODE: GGAGCTACATAGCCAGCCCCGTGG with ID: 705
ORIGINAL GRAPH NODE: GAGCTACATAGCCAGCCCCGTGGA with ID: 706
ORIGINAL GRAPH NODE: AGCTACATAGCCAGCCCCGTGGAG with ID: 707
ORIGINAL GRAPH NODE: GCTACATAGCCAGCCCCGTGGAGG with ID: 708
ORIGINAL GRAPH NODE: CTACATAGCCAGCCCCGTGGAGGG with ID: 709
ORIGINAL GRAPH NODE: TACATAGCCAGCCCCGTGGAGGGA with ID: 710
ORIGINAL GRAPH NODE: ACATAGCCAGCCCCGTGGAGGGAG with ID: 711
ORIGINAL GRAPH NODE: CATAGCCAGCCCCGTGGAGGGAGC with ID: 712
ORIGINAL GRAPH NODE: ATAGCCAGCCCCGTGGAGGGAGCC with ID: 713
ORIGINAL GRAPH NODE: TAGCCAGCCCCGTGGAGGGAGCCA with ID: 714
ORIGINAL GRAPH NODE: AGCCAGCCCCGTGGAGGGAGCCAC with ID: 715
ORIGINAL GRAPH NODE: GCCAGCCCCGTGGAGGGAGCCACC with ID: 716
ORIGINAL GRAPH NODE: CCAGCCCCGTGGAGGGAGCCACCA with ID: 717
ORIGINAL GRAPH NODE: CAGCCCCGTGGAGGGAGCCACCAG with ID: 718
ORIGINAL GRAPH NODE: AGCCCCGTGGAGGGAGCCACCAGC with ID: 719
ORIGINAL GRAPH NODE: GCCCCGTGGAGGGAGCCACCAGCC with ID: 720
ORIGINAL GRAPH NODE: CCCCGTGGAGGGAGCCACCAGCCA with ID: 721
ORIGINAL GRAPH NODE: CCCGTGGAGGGAGCCACCAGCCAC with ID: 722
ORIGINAL GRAPH NODE: CCGTGGAGGGAGCCACCAGCCACA with ID: 723
ORIGINAL GRAPH NODE: CGTGGAGGGAGCCACCAGCCACAG with ID: 724
ORIGINAL GRAPH NODE: GTGGAGGGAGCCACCAGCCACAGG with ID: 725
ORIGINAL GRAPH NODE: TGGAGGGAGCCACCAGCCACAGGT with ID: 726
ORIGINAL GRAPH NODE: GGAGGGAGCCACCAGCCACAGGTA with ID: 727
ORIGINAL GRAPH NODE: GAGGGAGCCACCAGCCACAGGTAC with ID: 728
ORIGINAL GRAPH NODE: AGGGAGCCACCAGCCACAGGTACC with ID: 729
ORIGINAL GRAPH NODE: GGGAGCCACCAGCCACAGGTACCT with ID: 730
ORIGINAL GRAPH NODE: GGAGCCACCAGCCACAGGTACCTG with ID: 731
ORIGINAL GRAPH NODE: GAGCCACCAGCCACAGGTACCTGA with ID: 732
ORIGINAL GRAPH NODE: AGCCACCAGCCACAGGTACCTGAT with ID: 733
ORIGINAL GRAPH NODE: GCCACCAGCCACAGGTACCTGATG with ID: 734
ORIGINAL GRAPH NODE: CCACCAGCCACAGGTACCTGATGG with ID: 735
ORIGINAL GRAPH NODE: CACCAGCCACAGGTACCTGATGGA with ID: 736
ORIGINAL GRAPH NODE: ACCAGCCACAGGTACCTGATGGAA with ID: 737
ORIGINAL GRAPH NODE: CCAGCCACAGGTACCTGATGGAAA with ID: 738
ORIGINAL GRAPH NODE: CAGCCACAGGTACCTGATGGAAAT with ID: 739
ORIGINAL GRAPH NODE: AGCCACAGGTACCTGATGGAAATG with ID: 740
ORIGINAL GRAPH NODE: GCCACAGGTACCTGATGGAAATGC with ID: 741
ORIGINAL GRAPH NODE: CCACAGGTACCTGATGGAAATGCC with ID: 742
ORIGINAL GRAPH NODE: CACAGGTACCTGATGGAAATGCCG with ID: 743
ORIGINAL GRAPH NODE: ACAGGTACCTGATGGAAATGCCGG with ID: 744
ORIGINAL GRAPH NODE: CAGGTACCTGATGGAAATGCCGGC with ID: 745
ORIGINAL GRAPH NODE: AGGTACCTGATGGAAATGCCGGCT with ID: 746
ORIGINAL GRAPH NODE: GGTACCTGATGGAAATGCCGGCTC with ID: 747
ORIGINAL GRAPH NODE: GTACCTGATGGAAATGCCGGCTCA with ID: 748
ORIGINAL GRAPH NODE: TACCTGATGGAAATGCCGGCTCAC with ID: 749
ORIGINAL GRAPH NODE: ACCTGATGGAAATGCCGGCTCACT with ID: 750
ORIGINAL GRAPH NODE: CCTGATGGAAATGCCGGCTCACTT with ID: 751
ORIGINAL GRAPH NODE: CTGATGGAAATGCCGGCTCACTTC with ID: 752
ORIGINAL GRAPH NODE: TGATGGAAATGCCGGCTCACTTCC with ID: 753
ORIGINAL GRAPH NODE: GATGGAAATGCCGGCTCACTTCCT with ID: 754
ORIGINAL GRAPH NODE: ATGGAAATGCCGGCTCACTTCCTG with ID: 755
ORIGINAL GRAPH NODE: TGGAAATGCCGGCTCACTTCCTGT with ID: 756
ORIGINAL GRAPH NODE: GGAAATGCCGGCTCACTTCCTGTG with ID: 757
ORIGINAL GRAPH NODE: GAAATGCCGGCTCACTTCCTGTGA with ID: 758
ORIGINAL GRAPH NODE: GCTAGGGGAAATAGGGGAGCTCCA with ID: 786
ORIGINAL GRAPH NODE: CTAGGGGAAATAGGGGAGCTCCAA with ID: 787
ORIGINAL GRAPH NODE: TAGGGGAAATAGGGGAGCTCCAAA with ID: 788
ORIGINAL GRAPH NODE: AGGGGAAATAGGGGAGCTCCAAAC with ID: 789
ORIGINAL GRAPH NODE: GGGGAAATAGGGGAGCTCCAAACC with ID: 790
ORIGINAL GRAPH NODE: GGGAAATAGGGGAGCTCCAAACCC with ID: 791
ORIGINAL GRAPH NODE: GGAAATAGGGGAGCTCCAAACCCA with ID: 792
ORIGINAL GRAPH NODE: GAAATAGGGGAGCTCCAAACCCAG with ID: 793
ORIGINAL GRAPH NODE: AAATAGGGGAGCTCCAAACCCAGC with ID: 794
ORIGINAL GRAPH NODE: AATAGGGGAGCTCCAAACCCAGCC with ID: 795
ORIGINAL GRAPH NODE: ATAGGGGAGCTCCAAACCCAGCCC with ID: 796
ORIGINAL GRAPH NODE: TAGGGGAGCTCCAAACCCAGCCCC with ID: 797
ORIGINAL GRAPH NODE: AGGGGAGCTCCAAACCCAGCCCCG with ID: 798
ORIGINAL GRAPH NODE: GGGGAGCTCCAAACCCAGCCCCGT with ID: 799
ORIGINAL GRAPH NODE: GGGAGCTCCAAACCCAGCCCCGTG with ID: 800
ORIGINAL GRAPH NODE: GGAGCTCCAAACCCAGCCCCGTGG with ID: 801
ORIGINAL GRAPH NODE: GAGCTCCAAACCCAGCCCCGTGGA with ID: 802
ORIGINAL GRAPH NODE: AGCTCCAAACCCAGCCCCGTGGAG with ID: 803
ORIGINAL GRAPH NODE: GCTCCAAACCCAGCCCCGTGGAGG with ID: 804
ORIGINAL GRAPH NODE: CTCCAAACCCAGCCCCGTGGAGGG with ID: 805
ORIGINAL GRAPH NODE: TCCAAACCCAGCCCCGTGGAGGGA with ID: 806
ORIGINAL GRAPH NODE: CCAAACCCAGCCCCGTGGAGGGAG with ID: 807
ORIGINAL GRAPH NODE: CAAACCCAGCCCCGTGGAGGGAGC with ID: 808
ORIGINAL GRAPH NODE: AAACCCAGCCCCGTGGAGGGAGCC with ID: 809
ORIGINAL GRAPH NODE: AACCCAGCCCCGTGGAGGGAGCCA with ID: 810
ORIGINAL GRAPH NODE: ACCCAGCCCCGTGGAGGGAGCCAC with ID: 811
ORIGINAL GRAPH NODE: CCCAGCCCCGTGGAGGGAGCCACC with ID: 812
ORIGINAL GRAPH NODE: GGAGCAGAGTTAGGAAGCTCCCTC with ID: 813
ORIGINAL GRAPH NODE: GAGCAGAGTTAGGAAGCTCCCTCA with ID: 814
ORIGINAL GRAPH NODE: AGCAGAGTTAGGAAGCTCCCTCAG with ID: 815
ORIGINAL GRAPH NODE: GCAGAGTTAGGAAGCTCCCTCAGC with ID: 816
ORIGINAL GRAPH NODE: CAGAGTTAGGAAGCTCCCTCAGCA with ID: 817
ORIGINAL GRAPH NODE: AGAGTTAGGAAGCTCCCTCAGCAC with ID: 818
ORIGINAL GRAPH NODE: GAGTTAGGAAGCTCCCTCAGCACT with ID: 819
ORIGINAL GRAPH NODE: AGTTAGGAAGCTCCCTCAGCACTC with ID: 820
ORIGINAL GRAPH NODE: GTTAGGAAGCTCCCTCAGCACTCT with ID: 821
ORIGINAL GRAPH NODE: TTAGGAAGCTCCCTCAGCACTCTG with ID: 822
ORIGINAL GRAPH NODE: TAGGAAGCTCCCTCAGCACTCTGA with ID: 823
ORIGINAL GRAPH NODE: AGGAAGCTCCCTCAGCACTCTGAA with ID: 824
ORIGINAL GRAPH NODE: GGAAGCTCCCTCAGCACTCTGAAC with ID: 825
ORIGINAL GRAPH NODE: GAAGCTCCCTCAGCACTCTGAACC with ID: 826
ORIGINAL GRAPH NODE: AAGCTCCCTCAGCACTCTGAACCC with ID: 827
ORIGINAL GRAPH NODE: AGCTCCCTCAGCACTCTGAACCCT with ID: 828
ORIGINAL GRAPH NODE: GCTCCCTCAGCACTCTGAACCCTG with ID: 829
ORIGINAL GRAPH NODE: CTCCCTCAGCACTCTGAACCCTGT with ID: 830
ORIGINAL GRAPH NODE: TCCCTCAGCACTCTGAACCCTGTG with ID: 831
ORIGINAL GRAPH NODE: CCCTCAGCACTCTGAACCCTGTGA with ID: 832
ORIGINAL GRAPH NODE: CCTCAGCACTCTGAACCCTGTGAG with ID: 833
ORIGINAL GRAPH NODE: CTCAGCACTCTGAACCCTGTGAGG with ID: 834
ORIGINAL GRAPH NODE: TCAGCACTCTGAACCCTGTGAGGC with ID: 835
ORIGINAL GRAPH NODE: CAGCACTCTGAACCCTGTGAGGCA with ID: 836
ORIGINAL GRAPH NODE: GGCTACAAACAGACTTCCTCAAGG with ID: 885
ORIGINAL GRAPH NODE: GCTACAAACAGACTTCCTCAAGGC with ID: 886
ORIGINAL GRAPH NODE: CTACAAACAGACTTCCTCAAGGCT with ID: 887
ORIGINAL GRAPH NODE: TACAAACAGACTTCCTCAAGGCTC with ID: 888
ORIGINAL GRAPH NODE: ACAAACAGACTTCCTCAAGGCTCA with ID: 889
ORIGINAL GRAPH NODE: CAAACAGACTTCCTCAAGGCTCAT with ID: 890
ORIGINAL GRAPH NODE: AAACAGACTTCCTCAAGGCTCATC with ID: 891
ORIGINAL GRAPH NODE: AACAGACTTCCTCAAGGCTCATCA with ID: 892
ORIGINAL GRAPH NODE: ACAGACTTCCTCAAGGCTCATCAG with ID: 893
ORIGINAL GRAPH NODE: CAGACTTCCTCAAGGCTCATCAGC with ID: 894
ORIGINAL GRAPH NODE: AGACTTCCTCAAGGCTCATCAGCA with ID: 895
ORIGINAL GRAPH NODE: GACTTCCTCAAGGCTCATCAGCAA with ID: 896
ORIGINAL GRAPH NODE: ACTTCCTCAAGGCTCATCAGCAAG with ID: 897
ORIGINAL GRAPH NODE: CTTCCTCAAGGCTCATCAGCAAGA with ID: 898
ORIGINAL GRAPH NODE: TTCCTCAAGGCTCATCAGCAAGAA with ID: 899
ORIGINAL GRAPH NODE: TCCTCAAGGCTCATCAGCAAGAAG with ID: 900
ORIGINAL GRAPH NODE: CCTCAAGGCTCATCAGCAAGAAGA with ID: 901
ORIGINAL GRAPH NODE: CTCAAGGCTCATCAGCAAGAAGAA with ID: 902
ORIGINAL GRAPH NODE: TCAAGGCTCATCAGCAAGAAGAAA with ID: 903
ORIGINAL GRAPH NODE: CAAGGCTCATCAGCAAGAAGAAAT with ID: 904
ORIGINAL GRAPH NODE: AAGGCTCATCAGCAAGAAGAAATC with ID: 905
ORIGINAL GRAPH NODE: AGGCTCATCAGCAAGAAGAAATCT with ID: 906
ORIGINAL GRAPH NODE: GGCTCATCAGCAAGAAGAAATCTT with ID: 907
ORIGINAL GRAPH NODE: GCTCATCAGCAAGAAGAAATCTTT with ID: 908
ORIGINAL GRAPH NODE: AGAATACAAAATGCCTTCCTCCAG with ID: 945
ORIGINAL GRAPH NODE: GAATACAAAATGCCTTCCTCCAGC with ID: 946
ORIGINAL GRAPH NODE: AATACAAAATGCCTTCCTCCAGCC with ID: 947
ORIGINAL GRAPH NODE: ATACAAAATGCCTTCCTCCAGCCT with ID: 948
ORIGINAL GRAPH NODE: TACAAAATGCCTTCCTCCAGCCTC with ID: 949
ORIGINAL GRAPH NODE: ACAAAATGCCTTCCTCCAGCCTCA with ID: 950
ORIGINAL GRAPH NODE: CAAAATGCCTTCCTCCAGCCTCAT with ID: 951
ORIGINAL GRAPH NODE: AAAATGCCTTCCTCCAGCCTCATC with ID: 952
ORIGINAL GRAPH NODE: AAATGCCTTCCTCCAGCCTCATCA with ID: 953
ORIGINAL GRAPH NODE: AATGCCTTCCTCCAGCCTCATCAG with ID: 954
ORIGINAL GRAPH NODE: ATGCCTTCCTCCAGCCTCATCAGC with ID: 955
ORIGINAL GRAPH NODE: TGCCTTCCTCCAGCCTCATCAGCA with ID: 956
ORIGINAL GRAPH NODE: GCCTTCCTCCAGCCTCATCAGCAG with ID: 957
ORIGINAL GRAPH NODE: CCTTCCTCCAGCCTCATCAGCAGG with ID: 958
ORIGINAL GRAPH NODE: CTTCCTCCAGCCTCATCAGCAGGA with ID: 959
ORIGINAL GRAPH NODE: TTCCTCCAGCCTCATCAGCAGGAA with ID: 960
ORIGINAL GRAPH NODE: TCCTCCAGCCTCATCAGCAGGAAG with ID: 961
ORIGINAL GRAPH NODE: CCTCCAGCCTCATCAGCAGGAAGA with ID: 962
ORIGINAL GRAPH NODE: CTCCAGCCTCATCAGCAGGAAGAA with ID: 963
ORIGINAL GRAPH NODE: TCCAGCCTCATCAGCAGGAAGAAA with ID: 964
ORIGINAL GRAPH NODE: CCAGCCTCATCAGCAGGAAGAAAT with ID: 965
ORIGINAL GRAPH NODE: CAGCCTCATCAGCAGGAAGAAATC with ID: 966
ORIGINAL GRAPH NODE: AGCCTCATCAGCAGGAAGAAATCT with ID: 967
ORIGINAL GRAPH NODE: GCCTCATCAGCAGGAAGAAATCTT with ID: 968
ORIGINAL GRAPH NODE: CCTCATCAGCAGGAAGAAATCTTT with ID: 969
ORIGINAL GRAPH NODE: CTCATCAGCAGGAAGAAATCTTTC with ID: 970
ORIGINAL GRAPH NODE: TCATCAGCAGGAAGAAATCTTTCT with ID: 971
ORIGINAL GRAPH NODE: CATCAGCAGGAAGAAATCTTTCTT with ID: 972
ORIGINAL GRAPH NODE: ATCAGCAGGAAGAAATCTTTCTTT with ID: 973
ORIGINAL GRAPH NODE: TCAGCAGGAAGAAATCTTTCTTTC with ID: 974
ORIGINAL GRAPH NODE: CAGCAGGAAGAAATCTTTCTTTCC with ID: 975
ORIGINAL GRAPH NODE: AGCAGGAAGAAATCTTTCTTTCCA with ID: 976
ORIGINAL GRAPH NODE: GCAGGAAGAAATCTTTCTTTCCAA with ID: 977
ORIGINAL GRAPH NODE: CAGGAAGAAATCTTTCTTTCCAAG with ID: 978
ORIGINAL GRAPH NODE: AGGAAGAAATCTTTCTTTCCAAGT with ID: 979
ORIGINAL GRAPH NODE: GGAAGAAATCTTTCTTTCCAAGTA with ID: 980
fixExtremeleyHighSingleEdges()
fixExtremelyHighSingleEdges()
removeLightEdges()
removeLightEdges()
SECTION
=================
REMOVING LIGHT In EDGES
=================
SECTION
=================
REMOVING LIGHT OUT EDGES
=================
SECTION
=================
REMOVING LIGHT FLOW EDGES
=================
FLOW: total in for vertex GGCCACACGATGGCTTATCACGTC:W0(V380_D-1) is 0, total out  is 2, averageCov=0
FLOW: total in for vertex C:W-1(V381_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V382_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V383_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V384_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V385_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V386_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V387_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V388_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V389_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V390_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V391_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V392_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V393_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V394_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V395_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V396_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V397_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V398_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V399_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V400_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V401_D-1) is 2, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V402_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V403_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex G:W-1(V404_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V405_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V406_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex T:W-1(V407_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex T:W-1(V408_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V409_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V410_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex T:W-1(V411_D-1) is 4, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V412_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V413_D-1) is 6, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V414_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex G:W-1(V415_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex C:W-1(V416_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V417_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V418_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V419_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V420_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V421_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V422_D-1) is 6, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V423_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex G:W-1(V424_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex C:W-1(V425_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V426_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V427_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex G:W-1(V428_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V429_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V430_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex G:W-1(V431_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V432_D-1) is 8, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V433_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V434_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V435_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V436_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V437_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V438_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V439_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V440_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex T:W-1(V441_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex T:W-1(V442_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex T:W-1(V443_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex C:W-1(V444_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex C:W-1(V445_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V446_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V447_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex G:W-1(V448_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex T:W-1(V449_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V450_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex G:W-1(V451_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex T:W-1(V452_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex G:W-1(V453_D-1) is 10, total out  is 8, averageCov=-1
FLOW: total in for vertex T:W-1(V454_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex C:W-1(V455_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex T:W-1(V456_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex T:W-1(V457_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V458_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V459_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex C:W-1(V460_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex T:W-1(V461_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex C:W-1(V462_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V463_D-1) is 8, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V464_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V465_D-1) is 6, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V466_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex G:W-1(V467_D-1) is 4, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V468_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V469_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V470_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V471_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V472_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V473_D-1) is 2, total out  is 4, averageCov=-1
FLOW: total in for vertex G:W-1(V474_D-1) is 4, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V475_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V476_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V477_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V478_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V479_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V480_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V481_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V482_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V483_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V484_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V485_D-1) is 2, total out  is 4, averageCov=-1
FLOW: total in for vertex T:W-1(V486_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V487_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V488_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex G:W-1(V489_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex G:W-1(V490_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V491_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V492_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V493_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V494_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex T:W-1(V495_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex T:W-1(V496_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V497_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V498_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V499_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V500_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V501_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex G:W-1(V502_D-1) is 4, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V503_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V504_D-1) is 6, total out  is 8, averageCov=-1
FLOW: total in for vertex G:W-1(V505_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex C:W-1(V506_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V507_D-1) is 8, total out  is 10, averageCov=-1
FLOW: total in for vertex G:W-1(V508_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex A:W-1(V509_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex G:W-1(V510_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex T:W-1(V511_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex T:W-1(V512_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex A:W-1(V513_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex G:W-1(V514_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex G:W-1(V515_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex A:W-1(V516_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex A:W-1(V517_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex G:W-1(V518_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex C:W-1(V519_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex T:W-1(V520_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex C:W-1(V521_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex C:W-1(V522_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex C:W-1(V523_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex T:W-1(V524_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex G:W-1(V525_D-1) is 8, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V526_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V527_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V528_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V529_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V530_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V531_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V532_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V533_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V534_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V535_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V536_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V537_D-1) is 6, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V538_D-1) is 4, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V539_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V540_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V541_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V542_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V543_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V544_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V545_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V546_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V547_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V548_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V549_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex G:W-1(V550_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex T:W-1(V551_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex C:W-1(V552_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex C:W-1(V553_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V554_D-1) is 8, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V555_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V556_D-1) is 6, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V557_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V558_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V559_D-1) is 4, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V560_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V561_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V562_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V563_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V564_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V565_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V566_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V567_D-1) is 2, total out  is 4, averageCov=-1
FLOW: total in for vertex T:W-1(V568_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V569_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex G:W-1(V570_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V571_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V572_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V573_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V574_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V575_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex G:W-1(V576_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex G:W-1(V577_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V578_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V579_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V580_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex T:W-1(V581_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V582_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex T:W-1(V583_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V584_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V585_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex T:W-1(V586_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V587_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V588_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V589_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex G:W-1(V590_D-1) is 4, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V591_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V592_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V593_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V594_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V595_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V596_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V597_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V598_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V599_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V600_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V601_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V602_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V603_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V604_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V605_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V606_D-1) is 2, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V607_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V608_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V609_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V610_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V611_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V612_D-1) is 4, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V613_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V614_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V615_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V616_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V617_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V618_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V619_D-1) is 6, total out  is 4, averageCov=-1
FLOW: total in for vertex T:W-1(V620_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex G:W-1(V621_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex G:W-1(V622_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex T:W-1(V623_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex T:W-1(V624_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V625_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V626_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex G:W-1(V627_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V628_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V629_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V630_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V631_D-1) is 4, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V632_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V633_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V634_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V635_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V636_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V637_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V638_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V639_D-1) is 6, total out  is 8, averageCov=-1
FLOW: total in for vertex T:W-1(V640_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex G:W-1(V641_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V642_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex C:W-1(V643_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V644_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V645_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V646_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex G:W-1(V647_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex T:W-1(V648_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V649_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V650_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V651_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex G:W-1(V652_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V653_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex G:W-1(V654_D-1) is 8, total out  is 10, averageCov=-1
FLOW: total in for vertex G:W-1(V655_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex A:W-1(V656_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex T:W-1(V657_D-1) is 10, total out  is 12, averageCov=-1
FLOW: total in for vertex G:W-1(V658_D-1) is 12, total out  is 10, averageCov=-1
FLOW: total in for vertex A:W-1(V659_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex C:W-1(V660_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex A:W-1(V661_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex G:W-1(V662_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex A:W-1(V663_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex C:W-1(V664_D-1) is 10, total out  is 8, averageCov=-1
FLOW: total in for vertex T:W-1(V665_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex C:W-1(V666_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex T:W-1(V667_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex C:W-1(V668_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex T:W-1(V669_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V670_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V671_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex G:W-1(V672_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex G:W-1(V673_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex G:W-1(V674_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V675_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex C:W-1(V676_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V677_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex T:W-1(V678_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V679_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex T:W-1(V680_D-1) is 8, total out  is 10, averageCov=-1
FLOW: total in for vertex G:W-1(V681_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex G:W-1(V682_D-1) is 10, total out  is 10, averageCov=-1
FLOW: total in for vertex G:W-1(V683_D-1) is 10, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V684_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex G:W-1(V685_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex C:W-1(V686_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex T:W-1(V687_D-1) is 8, total out  is 8, averageCov=-1
FLOW: total in for vertex A:W-1(V688_D-1) is 8, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V689_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V690_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V691_D-1) is 6, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V692_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex G:W-1(V693_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V694_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V695_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V696_D-1) is 4, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V697_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V698_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V699_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V700_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V701_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V702_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V703_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V704_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V705_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V706_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V707_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V708_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V709_D-1) is 6, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V710_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex G:W-1(V711_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V712_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V713_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V714_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V715_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V716_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V717_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V718_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V719_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V720_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V721_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V722_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V723_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V724_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V725_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V726_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V727_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V728_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V729_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V730_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V731_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V732_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V733_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V734_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V735_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V736_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V737_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex A:W-1(V738_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex T:W-1(V739_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex G:W-1(V740_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V741_D-1) is 6, total out  is 6, averageCov=-1
FLOW: total in for vertex C:W-1(V742_D-1) is 6, total out  is 4, averageCov=-1
FLOW: total in for vertex G:W-1(V743_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex G:W-1(V744_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V745_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex T:W-1(V746_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex C:W-1(V747_D-1) is 4, total out  is 4, averageCov=-1
FLOW: total in for vertex A:W-1(V748_D-1) is 4, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V749_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V750_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V751_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V752_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V753_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V754_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V755_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V756_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V757_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V758_D-1) is 2, total out  is 0, averageCov=-1
FLOW: total in for vertex GCTAGGGGAAATAGGGGAGCTCCA:W0(V786_D-1) is 0, total out  is 2, averageCov=0
FLOW: total in for vertex A:W-1(V787_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V788_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V789_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V790_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V791_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V792_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V793_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V794_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V795_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V796_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V797_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V798_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V799_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V800_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V801_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V802_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V803_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V804_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V805_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V806_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V807_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V808_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V809_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V810_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V811_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V812_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V813_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V814_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V815_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V816_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V817_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V818_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V819_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V820_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V821_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V822_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V823_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V824_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V825_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V826_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V827_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V828_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V829_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V830_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V831_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V832_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V833_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V834_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V835_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V836_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V885_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V886_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V887_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V888_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V889_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V890_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V891_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V892_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V893_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V894_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V895_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V896_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V897_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V898_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V899_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V900_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V901_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V902_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V903_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V904_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V905_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V906_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V907_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V908_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex AGAATACAAAATGCCTTCCTCCAG:W0(V945_D-1) is 0, total out  is 2, averageCov=0
FLOW: total in for vertex C:W-1(V946_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V947_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V948_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V949_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V950_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V951_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V952_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V953_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V954_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V955_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V956_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V957_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V958_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V959_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V960_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V961_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V962_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V963_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V964_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V965_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V966_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V967_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V968_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V969_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V970_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V971_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V972_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V973_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V974_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex C:W-1(V975_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V976_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V977_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex G:W-1(V978_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex T:W-1(V979_D-1) is 2, total out  is 2, averageCov=-1
FLOW: total in for vertex A:W-1(V980_D-1) is 2, total out  is 2, averageCov=-1
## Node descriptions before linear compaction:
## Node descriptions:
GGCCACACGATGGCTTATCACGTC:W0(V380_D-1) Preds: [] Succ: [C:W-1(V381_D-1) ]
C:W-1(V381_D-1) Preds: [GGCCACACGATGGCTTATCACGTC:W0(V380_D-1) ] Succ: [A:W-1(V382_D-1) ]
A:W-1(V382_D-1) Preds: [C:W-1(V381_D-1) ] Succ: [C:W-1(V383_D-1) ]
C:W-1(V383_D-1) Preds: [A:W-1(V382_D-1) ] Succ: [A:W-1(V384_D-1) ]
A:W-1(V384_D-1) Preds: [C:W-1(V383_D-1) ] Succ: [T:W-1(V385_D-1) ]
T:W-1(V385_D-1) Preds: [A:W-1(V384_D-1) ] Succ: [T:W-1(V386_D-1) ]
T:W-1(V386_D-1) Preds: [T:W-1(V385_D-1) ] Succ: [T:W-1(V387_D-1) ]
T:W-1(V387_D-1) Preds: [T:W-1(V386_D-1) ] Succ: [C:W-1(V388_D-1) ]
C:W-1(V388_D-1) Preds: [T:W-1(V387_D-1) ] Succ: [T:W-1(V389_D-1) ]
T:W-1(V389_D-1) Preds: [C:W-1(V388_D-1) ] Succ: [A:W-1(V390_D-1) ]
A:W-1(V390_D-1) Preds: [T:W-1(V389_D-1) ] Succ: [C:W-1(V391_D-1) ]
C:W-1(V391_D-1) Preds: [A:W-1(V390_D-1) ] Succ: [T:W-1(V392_D-1) ]
T:W-1(V392_D-1) Preds: [C:W-1(V391_D-1) ] Succ: [G:W-1(V393_D-1) ]
G:W-1(V393_D-1) Preds: [T:W-1(V392_D-1) ] Succ: [G:W-1(V394_D-1) ]
G:W-1(V394_D-1) Preds: [G:W-1(V393_D-1) ] Succ: [C:W-1(V395_D-1) ]
C:W-1(V395_D-1) Preds: [G:W-1(V394_D-1) ] Succ: [T:W-1(V396_D-1) ]
T:W-1(V396_D-1) Preds: [C:W-1(V395_D-1) ] Succ: [A:W-1(V397_D-1) ]
A:W-1(V397_D-1) Preds: [T:W-1(V396_D-1) ] Succ: [C:W-1(V398_D-1) ]
C:W-1(V398_D-1) Preds: [A:W-1(V397_D-1) ] Succ: [A:W-1(V399_D-1) ]
A:W-1(V399_D-1) Preds: [C:W-1(V398_D-1) ] Succ: [A:W-1(V400_D-1) ]
A:W-1(V400_D-1) Preds: [A:W-1(V399_D-1) ] Succ: [A:W-1(V401_D-1) ]
A:W-1(V401_D-1) Preds: [A:W-1(V400_D-1) ] Succ: [C:W-1(V402_D-1) ]
C:W-1(V402_D-1) Preds: [A:W-1(V401_D-1) ] Succ: [A:W-1(V403_D-1) ]
A:W-1(V403_D-1) Preds: [C:W-1(V402_D-1) ] Succ: [G:W-1(V404_D-1) ]
G:W-1(V404_D-1) Preds: [A:W-1(V403_D-1) ] Succ: [A:W-1(V405_D-1) ]
A:W-1(V405_D-1) Preds: [G:W-1(V404_D-1) ] Succ: [C:W-1(V406_D-1) ]
C:W-1(V406_D-1) Preds: [A:W-1(V405_D-1) ] Succ: [T:W-1(V407_D-1) ]
T:W-1(V407_D-1) Preds: [C:W-1(V406_D-1) ] Succ: [T:W-1(V408_D-1) ]
T:W-1(V408_D-1) Preds: [T:W-1(V407_D-1) ] Succ: [C:W-1(V409_D-1) ]
C:W-1(V409_D-1) Preds: [T:W-1(V408_D-1) ] Succ: [C:W-1(V410_D-1) ]
C:W-1(V410_D-1) Preds: [C:W-1(V409_D-1) ] Succ: [T:W-1(V411_D-1) ]
T:W-1(V411_D-1) Preds: [C:W-1(V410_D-1) ] Succ: [C:W-1(V412_D-1) ]
C:W-1(V412_D-1) Preds: [T:W-1(V411_D-1) ] Succ: [A:W-1(V413_D-1) ]
A:W-1(V413_D-1) Preds: [C:W-1(V412_D-1) ] Succ: [A:W-1(V414_D-1) ]
A:W-1(V414_D-1) Preds: [A:W-1(V413_D-1) ] Succ: [G:W-1(V415_D-1) ]
G:W-1(V415_D-1) Preds: [A:W-1(V414_D-1) ] Succ: [C:W-1(V416_D-1) G:W-1(V885_D-1) ]
C:W-1(V416_D-1) Preds: [G:W-1(V415_D-1) ] Succ: [C:W-1(V417_D-1) ]
C:W-1(V417_D-1) Preds: [C:W-1(V416_D-1) ] Succ: [T:W-1(V418_D-1) ]
T:W-1(V418_D-1) Preds: [C:W-1(V417_D-1) ] Succ: [C:W-1(V419_D-1) ]
C:W-1(V419_D-1) Preds: [T:W-1(V418_D-1) ] Succ: [A:W-1(V420_D-1) ]
A:W-1(V420_D-1) Preds: [C:W-1(V419_D-1) ] Succ: [T:W-1(V421_D-1) ]
T:W-1(V421_D-1) Preds: [A:W-1(V420_D-1) ] Succ: [C:W-1(V422_D-1) ]
C:W-1(V422_D-1) Preds: [T:W-1(V421_D-1) ] Succ: [A:W-1(V423_D-1) ]
A:W-1(V423_D-1) Preds: [C:W-1(V422_D-1) ] Succ: [G:W-1(V424_D-1) ]
G:W-1(V424_D-1) Preds: [A:W-1(V423_D-1) ] Succ: [C:W-1(V425_D-1) ]
C:W-1(V425_D-1) Preds: [G:W-1(V424_D-1) ] Succ: [A:W-1(V426_D-1) ]
A:W-1(V426_D-1) Preds: [C:W-1(V425_D-1) ] Succ: [A:W-1(V427_D-1) ]
A:W-1(V427_D-1) Preds: [A:W-1(V426_D-1) ] Succ: [G:W-1(V428_D-1) ]
G:W-1(V428_D-1) Preds: [A:W-1(V427_D-1) ] Succ: [A:W-1(V429_D-1) ]
A:W-1(V429_D-1) Preds: [G:W-1(V428_D-1) ] Succ: [A:W-1(V430_D-1) ]
A:W-1(V430_D-1) Preds: [A:W-1(V429_D-1) ] Succ: [G:W-1(V431_D-1) ]
G:W-1(V431_D-1) Preds: [A:W-1(V430_D-1) ] Succ: [A:W-1(V432_D-1) ]
A:W-1(V432_D-1) Preds: [G:W-1(V431_D-1) ] Succ: [A:W-1(V433_D-1) ]
A:W-1(V433_D-1) Preds: [A:W-1(V432_D-1) ] Succ: [A:W-1(V434_D-1) ]
A:W-1(V434_D-1) Preds: [A:W-1(V433_D-1) ] Succ: [T:W-1(V435_D-1) ]
T:W-1(V435_D-1) Preds: [A:W-1(V434_D-1) ] Succ: [C:W-1(V436_D-1) ]
C:W-1(V436_D-1) Preds: [T:W-1(V435_D-1) ] Succ: [T:W-1(V437_D-1) ]
T:W-1(V437_D-1) Preds: [C:W-1(V436_D-1) ] Succ: [T:W-1(V438_D-1) ]
T:W-1(V438_D-1) Preds: [T:W-1(V437_D-1) ] Succ: [T:W-1(V439_D-1) ]
T:W-1(V439_D-1) Preds: [T:W-1(V438_D-1) ] Succ: [C:W-1(V440_D-1) ]
C:W-1(V440_D-1) Preds: [T:W-1(V439_D-1) T:W-1(V908_D-1) ] Succ: [T:W-1(V441_D-1) ]
T:W-1(V441_D-1) Preds: [C:W-1(V440_D-1) ] Succ: [T:W-1(V442_D-1) ]
T:W-1(V442_D-1) Preds: [T:W-1(V441_D-1) ] Succ: [T:W-1(V443_D-1) ]
T:W-1(V443_D-1) Preds: [T:W-1(V442_D-1) ] Succ: [C:W-1(V444_D-1) ]
C:W-1(V444_D-1) Preds: [T:W-1(V443_D-1) ] Succ: [C:W-1(V445_D-1) ]
C:W-1(V445_D-1) Preds: [C:W-1(V444_D-1) ] Succ: [A:W-1(V446_D-1) ]
A:W-1(V446_D-1) Preds: [C:W-1(V445_D-1) ] Succ: [A:W-1(V447_D-1) ]
A:W-1(V447_D-1) Preds: [A:W-1(V446_D-1) ] Succ: [G:W-1(V448_D-1) ]
G:W-1(V448_D-1) Preds: [A:W-1(V447_D-1) ] Succ: [T:W-1(V449_D-1) ]
T:W-1(V449_D-1) Preds: [G:W-1(V448_D-1) ] Succ: [A:W-1(V450_D-1) ]
A:W-1(V450_D-1) Preds: [T:W-1(V449_D-1) ] Succ: [G:W-1(V451_D-1) ]
G:W-1(V451_D-1) Preds: [A:W-1(V450_D-1) A:W-1(V980_D-1) ] Succ: [T:W-1(V452_D-1) ]
T:W-1(V452_D-1) Preds: [G:W-1(V451_D-1) ] Succ: [G:W-1(V453_D-1) ]
G:W-1(V453_D-1) Preds: [T:W-1(V452_D-1) ] Succ: [T:W-1(V454_D-1) ]
T:W-1(V454_D-1) Preds: [G:W-1(V453_D-1) ] Succ: [C:W-1(V455_D-1) ]
C:W-1(V455_D-1) Preds: [T:W-1(V454_D-1) ] Succ: [T:W-1(V456_D-1) ]
T:W-1(V456_D-1) Preds: [C:W-1(V455_D-1) ] Succ: [T:W-1(V457_D-1) ]
T:W-1(V457_D-1) Preds: [T:W-1(V456_D-1) ] Succ: [A:W-1(V458_D-1) ]
A:W-1(V458_D-1) Preds: [T:W-1(V457_D-1) ] Succ: [A:W-1(V459_D-1) ]
A:W-1(V459_D-1) Preds: [A:W-1(V458_D-1) ] Succ: [C:W-1(V460_D-1) ]
C:W-1(V460_D-1) Preds: [A:W-1(V459_D-1) ] Succ: [T:W-1(V461_D-1) ]
T:W-1(V461_D-1) Preds: [C:W-1(V460_D-1) ] Succ: [C:W-1(V462_D-1) ]
C:W-1(V462_D-1) Preds: [T:W-1(V461_D-1) ] Succ: [A:W-1(V463_D-1) ]
A:W-1(V463_D-1) Preds: [C:W-1(V462_D-1) ] Succ: [G:W-1(V464_D-1) ]
G:W-1(V464_D-1) Preds: [A:W-1(V463_D-1) ] Succ: [G:W-1(V465_D-1) ]
G:W-1(V465_D-1) Preds: [G:W-1(V464_D-1) ] Succ: [A:W-1(V466_D-1) ]
A:W-1(V466_D-1) Preds: [G:W-1(V465_D-1) ] Succ: [G:W-1(V467_D-1) ]
G:W-1(V467_D-1) Preds: [A:W-1(V466_D-1) ] Succ: [A:W-1(V468_D-1) ]
A:W-1(V468_D-1) Preds: [G:W-1(V467_D-1) ] Succ: [T:W-1(V469_D-1) ]
T:W-1(V469_D-1) Preds: [A:W-1(V468_D-1) ] Succ: [C:W-1(V470_D-1) ]
C:W-1(V470_D-1) Preds: [T:W-1(V469_D-1) ] Succ: [A:W-1(V471_D-1) ]
A:W-1(V471_D-1) Preds: [C:W-1(V470_D-1) ] Succ: [T:W-1(V472_D-1) ]
T:W-1(V472_D-1) Preds: [A:W-1(V471_D-1) ] Succ: [G:W-1(V473_D-1) ]
G:W-1(V473_D-1) Preds: [T:W-1(V472_D-1) ] Succ: [G:W-1(V474_D-1) ]
G:W-1(V474_D-1) Preds: [G:W-1(V473_D-1) ] Succ: [T:W-1(V475_D-1) ]
T:W-1(V475_D-1) Preds: [G:W-1(V474_D-1) ] Succ: [A:W-1(V476_D-1) ]
A:W-1(V476_D-1) Preds: [T:W-1(V475_D-1) ] Succ: [G:W-1(V477_D-1) ]
G:W-1(V477_D-1) Preds: [A:W-1(V476_D-1) ] Succ: [G:W-1(V478_D-1) ]
G:W-1(V478_D-1) Preds: [G:W-1(V477_D-1) ] Succ: [G:W-1(V479_D-1) ]
G:W-1(V479_D-1) Preds: [G:W-1(V478_D-1) ] Succ: [A:W-1(V480_D-1) ]
A:W-1(V480_D-1) Preds: [G:W-1(V479_D-1) ] Succ: [A:W-1(V481_D-1) ]
A:W-1(V481_D-1) Preds: [A:W-1(V480_D-1) ] Succ: [G:W-1(V482_D-1) ]
G:W-1(V482_D-1) Preds: [A:W-1(V481_D-1) ] Succ: [G:W-1(V483_D-1) ]
G:W-1(V483_D-1) Preds: [G:W-1(V482_D-1) ] Succ: [G:W-1(V484_D-1) ]
G:W-1(V484_D-1) Preds: [G:W-1(V483_D-1) ] Succ: [G:W-1(V485_D-1) ]
G:W-1(V485_D-1) Preds: [G:W-1(V484_D-1) ] Succ: [T:W-1(V486_D-1) ]
T:W-1(V486_D-1) Preds: [G:W-1(V485_D-1) ] Succ: [C:W-1(V487_D-1) ]
C:W-1(V487_D-1) Preds: [T:W-1(V486_D-1) ] Succ: [A:W-1(V488_D-1) ]
A:W-1(V488_D-1) Preds: [C:W-1(V487_D-1) ] Succ: [G:W-1(V489_D-1) ]
G:W-1(V489_D-1) Preds: [A:W-1(V488_D-1) ] Succ: [G:W-1(V490_D-1) ]
G:W-1(V490_D-1) Preds: [G:W-1(V489_D-1) ] Succ: [C:W-1(V491_D-1) ]
C:W-1(V491_D-1) Preds: [G:W-1(V490_D-1) ] Succ: [C:W-1(V492_D-1) ]
C:W-1(V492_D-1) Preds: [C:W-1(V491_D-1) ] Succ: [A:W-1(V493_D-1) ]
A:W-1(V493_D-1) Preds: [C:W-1(V492_D-1) ] Succ: [C:W-1(V494_D-1) ]
C:W-1(V494_D-1) Preds: [A:W-1(V493_D-1) ] Succ: [T:W-1(V495_D-1) ]
T:W-1(V495_D-1) Preds: [C:W-1(V494_D-1) ] Succ: [T:W-1(V496_D-1) ]
T:W-1(V496_D-1) Preds: [T:W-1(V495_D-1) ] Succ: [C:W-1(V497_D-1) ]
C:W-1(V497_D-1) Preds: [T:W-1(V496_D-1) ] Succ: [A:W-1(V498_D-1) ]
A:W-1(V498_D-1) Preds: [C:W-1(V497_D-1) ] Succ: [C:W-1(V499_D-1) ]
C:W-1(V499_D-1) Preds: [A:W-1(V498_D-1) ] Succ: [A:W-1(V500_D-1) ]
A:W-1(V500_D-1) Preds: [C:W-1(V499_D-1) ] Succ: [A:W-1(V501_D-1) ]
A:W-1(V501_D-1) Preds: [A:W-1(V500_D-1) ] Succ: [G:W-1(V502_D-1) ]
G:W-1(V502_D-1) Preds: [A:W-1(V501_D-1) ] Succ: [G:W-1(V503_D-1) ]
G:W-1(V503_D-1) Preds: [G:W-1(V502_D-1) ] Succ: [A:W-1(V504_D-1) ]
A:W-1(V504_D-1) Preds: [G:W-1(V503_D-1) ] Succ: [G:W-1(V505_D-1) ]
G:W-1(V505_D-1) Preds: [A:W-1(V504_D-1) ] Succ: [C:W-1(V506_D-1) ]
C:W-1(V506_D-1) Preds: [G:W-1(V505_D-1) ] Succ: [A:W-1(V507_D-1) ]
A:W-1(V507_D-1) Preds: [C:W-1(V506_D-1) ] Succ: [G:W-1(V508_D-1) ]
G:W-1(V508_D-1) Preds: [A:W-1(V507_D-1) ] Succ: [A:W-1(V509_D-1) ]
A:W-1(V509_D-1) Preds: [G:W-1(V508_D-1) ] Succ: [G:W-1(V510_D-1) ]
G:W-1(V510_D-1) Preds: [A:W-1(V509_D-1) ] Succ: [T:W-1(V511_D-1) ]
T:W-1(V511_D-1) Preds: [G:W-1(V510_D-1) ] Succ: [T:W-1(V512_D-1) ]
T:W-1(V512_D-1) Preds: [T:W-1(V511_D-1) ] Succ: [A:W-1(V513_D-1) ]
A:W-1(V513_D-1) Preds: [T:W-1(V512_D-1) ] Succ: [G:W-1(V514_D-1) ]
G:W-1(V514_D-1) Preds: [A:W-1(V513_D-1) ] Succ: [G:W-1(V515_D-1) ]
G:W-1(V515_D-1) Preds: [G:W-1(V514_D-1) ] Succ: [A:W-1(V516_D-1) ]
A:W-1(V516_D-1) Preds: [G:W-1(V515_D-1) ] Succ: [A:W-1(V517_D-1) ]
A:W-1(V517_D-1) Preds: [A:W-1(V516_D-1) ] Succ: [G:W-1(V518_D-1) ]
G:W-1(V518_D-1) Preds: [A:W-1(V517_D-1) ] Succ: [C:W-1(V519_D-1) ]
C:W-1(V519_D-1) Preds: [G:W-1(V518_D-1) ] Succ: [T:W-1(V520_D-1) ]
T:W-1(V520_D-1) Preds: [C:W-1(V519_D-1) ] Succ: [C:W-1(V521_D-1) ]
C:W-1(V521_D-1) Preds: [T:W-1(V520_D-1) ] Succ: [C:W-1(V522_D-1) ]
C:W-1(V522_D-1) Preds: [C:W-1(V521_D-1) ] Succ: [C:W-1(V523_D-1) ]
C:W-1(V523_D-1) Preds: [C:W-1(V522_D-1) ] Succ: [T:W-1(V524_D-1) ]
T:W-1(V524_D-1) Preds: [C:W-1(V523_D-1) ] Succ: [G:W-1(V525_D-1) C:W-1(V813_D-1) ]
G:W-1(V525_D-1) Preds: [T:W-1(V524_D-1) ] Succ: [A:W-1(V526_D-1) ]
A:W-1(V526_D-1) Preds: [G:W-1(V525_D-1) ] Succ: [G:W-1(V527_D-1) ]
G:W-1(V527_D-1) Preds: [A:W-1(V526_D-1) ] Succ: [C:W-1(V528_D-1) ]
C:W-1(V528_D-1) Preds: [G:W-1(V527_D-1) ] Succ: [A:W-1(V529_D-1) ]
A:W-1(V529_D-1) Preds: [C:W-1(V528_D-1) ] Succ: [C:W-1(V530_D-1) ]
C:W-1(V530_D-1) Preds: [A:W-1(V529_D-1) ] Succ: [T:W-1(V531_D-1) ]
T:W-1(V531_D-1) Preds: [C:W-1(V530_D-1) ] Succ: [C:W-1(V532_D-1) ]
C:W-1(V532_D-1) Preds: [T:W-1(V531_D-1) ] Succ: [T:W-1(V533_D-1) ]
T:W-1(V533_D-1) Preds: [C:W-1(V532_D-1) ] Succ: [G:W-1(V534_D-1) ]
G:W-1(V534_D-1) Preds: [T:W-1(V533_D-1) ] Succ: [A:W-1(V535_D-1) ]
A:W-1(V535_D-1) Preds: [G:W-1(V534_D-1) ] Succ: [A:W-1(V536_D-1) ]
A:W-1(V536_D-1) Preds: [A:W-1(V535_D-1) ] Succ: [C:W-1(V537_D-1) ]
C:W-1(V537_D-1) Preds: [A:W-1(V536_D-1) ] Succ: [C:W-1(V538_D-1) ]
C:W-1(V538_D-1) Preds: [C:W-1(V537_D-1) ] Succ: [C:W-1(V539_D-1) ]
C:W-1(V539_D-1) Preds: [C:W-1(V538_D-1) ] Succ: [T:W-1(V540_D-1) ]
T:W-1(V540_D-1) Preds: [C:W-1(V539_D-1) ] Succ: [G:W-1(V541_D-1) ]
G:W-1(V541_D-1) Preds: [T:W-1(V540_D-1) ] Succ: [T:W-1(V542_D-1) ]
T:W-1(V542_D-1) Preds: [G:W-1(V541_D-1) ] Succ: [G:W-1(V543_D-1) ]
G:W-1(V543_D-1) Preds: [T:W-1(V542_D-1) ] Succ: [A:W-1(V544_D-1) ]
A:W-1(V544_D-1) Preds: [G:W-1(V543_D-1) ] Succ: [G:W-1(V545_D-1) ]
G:W-1(V545_D-1) Preds: [A:W-1(V544_D-1) ] Succ: [G:W-1(V546_D-1) ]
G:W-1(V546_D-1) Preds: [G:W-1(V545_D-1) ] Succ: [C:W-1(V547_D-1) ]
C:W-1(V547_D-1) Preds: [G:W-1(V546_D-1) ] Succ: [A:W-1(V548_D-1) ]
A:W-1(V548_D-1) Preds: [C:W-1(V547_D-1) ] Succ: [A:W-1(V549_D-1) ]
A:W-1(V549_D-1) Preds: [A:W-1(V548_D-1) A:W-1(V836_D-1) ] Succ: [G:W-1(V550_D-1) ]
G:W-1(V550_D-1) Preds: [A:W-1(V549_D-1) ] Succ: [T:W-1(V551_D-1) ]
T:W-1(V551_D-1) Preds: [G:W-1(V550_D-1) ] Succ: [C:W-1(V552_D-1) ]
C:W-1(V552_D-1) Preds: [T:W-1(V551_D-1) ] Succ: [C:W-1(V553_D-1) ]
C:W-1(V553_D-1) Preds: [C:W-1(V552_D-1) ] Succ: [A:W-1(V554_D-1) ]
A:W-1(V554_D-1) Preds: [C:W-1(V553_D-1) ] Succ: [C:W-1(V555_D-1) ]
C:W-1(V555_D-1) Preds: [A:W-1(V554_D-1) ] Succ: [C:W-1(V556_D-1) ]
C:W-1(V556_D-1) Preds: [C:W-1(V555_D-1) ] Succ: [A:W-1(V557_D-1) ]
A:W-1(V557_D-1) Preds: [C:W-1(V556_D-1) ] Succ: [C:W-1(V558_D-1) ]
C:W-1(V558_D-1) Preds: [A:W-1(V557_D-1) ] Succ: [C:W-1(V559_D-1) ]
C:W-1(V559_D-1) Preds: [C:W-1(V558_D-1) ] Succ: [A:W-1(V560_D-1) ]
A:W-1(V560_D-1) Preds: [C:W-1(V559_D-1) ] Succ: [G:W-1(V561_D-1) ]
G:W-1(V561_D-1) Preds: [A:W-1(V560_D-1) ] Succ: [C:W-1(V562_D-1) ]
C:W-1(V562_D-1) Preds: [G:W-1(V561_D-1) ] Succ: [G:W-1(V563_D-1) ]
G:W-1(V563_D-1) Preds: [C:W-1(V562_D-1) ] Succ: [T:W-1(V564_D-1) ]
T:W-1(V564_D-1) Preds: [G:W-1(V563_D-1) ] Succ: [A:W-1(V565_D-1) ]
A:W-1(V565_D-1) Preds: [T:W-1(V564_D-1) ] Succ: [T:W-1(V566_D-1) ]
T:W-1(V566_D-1) Preds: [A:W-1(V565_D-1) ] Succ: [C:W-1(V567_D-1) ]
C:W-1(V567_D-1) Preds: [T:W-1(V566_D-1) ] Succ: [T:W-1(V568_D-1) ]
T:W-1(V568_D-1) Preds: [C:W-1(V567_D-1) ] Succ: [A:W-1(V569_D-1) ]
A:W-1(V569_D-1) Preds: [T:W-1(V568_D-1) ] Succ: [G:W-1(V570_D-1) ]
G:W-1(V570_D-1) Preds: [A:W-1(V569_D-1) ] Succ: [A:W-1(V571_D-1) ]
A:W-1(V571_D-1) Preds: [G:W-1(V570_D-1) ] Succ: [C:W-1(V572_D-1) ]
C:W-1(V572_D-1) Preds: [A:W-1(V571_D-1) ] Succ: [C:W-1(V573_D-1) ]
C:W-1(V573_D-1) Preds: [C:W-1(V572_D-1) ] Succ: [C:W-1(V574_D-1) ]
C:W-1(V574_D-1) Preds: [C:W-1(V573_D-1) ] Succ: [A:W-1(V575_D-1) ]
A:W-1(V575_D-1) Preds: [C:W-1(V574_D-1) ] Succ: [G:W-1(V576_D-1) ]
G:W-1(V576_D-1) Preds: [A:W-1(V575_D-1) ] Succ: [G:W-1(V577_D-1) ]
G:W-1(V577_D-1) Preds: [G:W-1(V576_D-1) ] Succ: [C:W-1(V578_D-1) ]
C:W-1(V578_D-1) Preds: [G:W-1(V577_D-1) ] Succ: [C:W-1(V579_D-1) ]
C:W-1(V579_D-1) Preds: [C:W-1(V578_D-1) ] Succ: [A:W-1(V580_D-1) ]
A:W-1(V580_D-1) Preds: [C:W-1(V579_D-1) ] Succ: [T:W-1(V581_D-1) ]
T:W-1(V581_D-1) Preds: [A:W-1(V580_D-1) ] Succ: [C:W-1(V582_D-1) ]
C:W-1(V582_D-1) Preds: [T:W-1(V581_D-1) ] Succ: [T:W-1(V583_D-1) ]
T:W-1(V583_D-1) Preds: [C:W-1(V582_D-1) ] Succ: [A:W-1(V584_D-1) ]
A:W-1(V584_D-1) Preds: [T:W-1(V583_D-1) ] Succ: [A:W-1(V585_D-1) ]
A:W-1(V585_D-1) Preds: [A:W-1(V584_D-1) ] Succ: [T:W-1(V586_D-1) ]
T:W-1(V586_D-1) Preds: [A:W-1(V585_D-1) ] Succ: [A:W-1(V587_D-1) ]
A:W-1(V587_D-1) Preds: [T:W-1(V586_D-1) ] Succ: [A:W-1(V588_D-1) ]
A:W-1(V588_D-1) Preds: [A:W-1(V587_D-1) ] Succ: [A:W-1(V589_D-1) ]
A:W-1(V589_D-1) Preds: [A:W-1(V588_D-1) ] Succ: [G:W-1(V590_D-1) ]
G:W-1(V590_D-1) Preds: [A:W-1(V589_D-1) ] Succ: [G:W-1(V591_D-1) ]
G:W-1(V591_D-1) Preds: [G:W-1(V590_D-1) ] Succ: [A:W-1(V592_D-1) ]
A:W-1(V592_D-1) Preds: [G:W-1(V591_D-1) ] Succ: [A:W-1(V593_D-1) ]
A:W-1(V593_D-1) Preds: [A:W-1(V592_D-1) ] Succ: [A:W-1(V594_D-1) ]
A:W-1(V594_D-1) Preds: [A:W-1(V593_D-1) ] Succ: [A:W-1(V595_D-1) ]
A:W-1(V595_D-1) Preds: [A:W-1(V594_D-1) ] Succ: [C:W-1(V596_D-1) ]
C:W-1(V596_D-1) Preds: [A:W-1(V595_D-1) ] Succ: [T:W-1(V597_D-1) ]
T:W-1(V597_D-1) Preds: [C:W-1(V596_D-1) ] Succ: [G:W-1(V598_D-1) ]
G:W-1(V598_D-1) Preds: [T:W-1(V597_D-1) ] Succ: [C:W-1(V599_D-1) ]
C:W-1(V599_D-1) Preds: [G:W-1(V598_D-1) ] Succ: [A:W-1(V600_D-1) ]
A:W-1(V600_D-1) Preds: [C:W-1(V599_D-1) ] Succ: [T:W-1(V601_D-1) ]
T:W-1(V601_D-1) Preds: [A:W-1(V600_D-1) ] Succ: [C:W-1(V602_D-1) ]
C:W-1(V602_D-1) Preds: [T:W-1(V601_D-1) ] Succ: [T:W-1(V603_D-1) ]
T:W-1(V603_D-1) Preds: [C:W-1(V602_D-1) ] Succ: [T:W-1(V604_D-1) ]
T:W-1(V604_D-1) Preds: [T:W-1(V603_D-1) ] Succ: [T:W-1(V605_D-1) ]
T:W-1(V605_D-1) Preds: [T:W-1(V604_D-1) ] Succ: [G:W-1(V606_D-1) ]
G:W-1(V606_D-1) Preds: [T:W-1(V605_D-1) ] Succ: [C:W-1(V607_D-1) ]
C:W-1(V607_D-1) Preds: [G:W-1(V606_D-1) ] Succ: [C:W-1(V608_D-1) ]
C:W-1(V608_D-1) Preds: [C:W-1(V607_D-1) ] Succ: [C:W-1(V609_D-1) ]
C:W-1(V609_D-1) Preds: [C:W-1(V608_D-1) ] Succ: [A:W-1(V610_D-1) ]
A:W-1(V610_D-1) Preds: [C:W-1(V609_D-1) ] Succ: [C:W-1(V611_D-1) ]
C:W-1(V611_D-1) Preds: [A:W-1(V610_D-1) ] Succ: [A:W-1(V612_D-1) ]
A:W-1(V612_D-1) Preds: [C:W-1(V611_D-1) ] Succ: [T:W-1(V613_D-1) ]
T:W-1(V613_D-1) Preds: [A:W-1(V612_D-1) ] Succ: [G:W-1(V614_D-1) ]
G:W-1(V614_D-1) Preds: [T:W-1(V613_D-1) ] Succ: [A:W-1(V615_D-1) ]
A:W-1(V615_D-1) Preds: [G:W-1(V614_D-1) ] Succ: [T:W-1(V616_D-1) ]
T:W-1(V616_D-1) Preds: [A:W-1(V615_D-1) ] Succ: [G:W-1(V617_D-1) ]
G:W-1(V617_D-1) Preds: [T:W-1(V616_D-1) ] Succ: [C:W-1(V618_D-1) ]
C:W-1(V618_D-1) Preds: [G:W-1(V617_D-1) ] Succ: [T:W-1(V619_D-1) ]
T:W-1(V619_D-1) Preds: [C:W-1(V618_D-1) ] Succ: [T:W-1(V620_D-1) ]
T:W-1(V620_D-1) Preds: [T:W-1(V619_D-1) ] Succ: [G:W-1(V621_D-1) ]
G:W-1(V621_D-1) Preds: [T:W-1(V620_D-1) ] Succ: [G:W-1(V622_D-1) ]
G:W-1(V622_D-1) Preds: [G:W-1(V621_D-1) ] Succ: [T:W-1(V623_D-1) ]
T:W-1(V623_D-1) Preds: [G:W-1(V622_D-1) ] Succ: [T:W-1(V624_D-1) ]
T:W-1(V624_D-1) Preds: [T:W-1(V623_D-1) ] Succ: [A:W-1(V625_D-1) ]
A:W-1(V625_D-1) Preds: [T:W-1(V624_D-1) ] Succ: [A:W-1(V626_D-1) ]
A:W-1(V626_D-1) Preds: [A:W-1(V625_D-1) ] Succ: [G:W-1(V627_D-1) ]
G:W-1(V627_D-1) Preds: [A:W-1(V626_D-1) ] Succ: [A:W-1(V628_D-1) ]
A:W-1(V628_D-1) Preds: [G:W-1(V627_D-1) ] Succ: [C:W-1(V629_D-1) ]
C:W-1(V629_D-1) Preds: [A:W-1(V628_D-1) ] Succ: [A:W-1(V630_D-1) ]
A:W-1(V630_D-1) Preds: [C:W-1(V629_D-1) ] Succ: [A:W-1(V631_D-1) ]
A:W-1(V631_D-1) Preds: [A:W-1(V630_D-1) ] Succ: [G:W-1(V632_D-1) ]
G:W-1(V632_D-1) Preds: [A:W-1(V631_D-1) ] Succ: [G:W-1(V633_D-1) ]
G:W-1(V633_D-1) Preds: [G:W-1(V632_D-1) ] Succ: [G:W-1(V634_D-1) ]
G:W-1(V634_D-1) Preds: [G:W-1(V633_D-1) ] Succ: [G:W-1(V635_D-1) ]
G:W-1(V635_D-1) Preds: [G:W-1(V634_D-1) ] Succ: [T:W-1(V636_D-1) ]
T:W-1(V636_D-1) Preds: [G:W-1(V635_D-1) ] Succ: [T:W-1(V637_D-1) ]
T:W-1(V637_D-1) Preds: [T:W-1(V636_D-1) ] Succ: [A:W-1(V638_D-1) ]
A:W-1(V638_D-1) Preds: [T:W-1(V637_D-1) ] Succ: [G:W-1(V639_D-1) ]
G:W-1(V639_D-1) Preds: [A:W-1(V638_D-1) ] Succ: [T:W-1(V640_D-1) ]
T:W-1(V640_D-1) Preds: [G:W-1(V639_D-1) ] Succ: [G:W-1(V641_D-1) ]
G:W-1(V641_D-1) Preds: [T:W-1(V640_D-1) ] Succ: [A:W-1(V642_D-1) ]
A:W-1(V642_D-1) Preds: [G:W-1(V641_D-1) ] Succ: [C:W-1(V643_D-1) ]
C:W-1(V643_D-1) Preds: [A:W-1(V642_D-1) ] Succ: [A:W-1(V644_D-1) ]
A:W-1(V644_D-1) Preds: [C:W-1(V643_D-1) ] Succ: [A:W-1(V645_D-1) ]
A:W-1(V645_D-1) Preds: [A:W-1(V644_D-1) ] Succ: [A:W-1(V646_D-1) ]
A:W-1(V646_D-1) Preds: [A:W-1(V645_D-1) ] Succ: [G:W-1(V647_D-1) ]
G:W-1(V647_D-1) Preds: [A:W-1(V646_D-1) ] Succ: [T:W-1(V648_D-1) ]
T:W-1(V648_D-1) Preds: [G:W-1(V647_D-1) ] Succ: [A:W-1(V649_D-1) ]
A:W-1(V649_D-1) Preds: [T:W-1(V648_D-1) ] Succ: [A:W-1(V650_D-1) ]
A:W-1(V650_D-1) Preds: [A:W-1(V649_D-1) ] Succ: [A:W-1(V651_D-1) ]
A:W-1(V651_D-1) Preds: [A:W-1(V650_D-1) ] Succ: [G:W-1(V652_D-1) ]
G:W-1(V652_D-1) Preds: [A:W-1(V651_D-1) ] Succ: [A:W-1(V653_D-1) ]
A:W-1(V653_D-1) Preds: [G:W-1(V652_D-1) ] Succ: [G:W-1(V654_D-1) ]
G:W-1(V654_D-1) Preds: [A:W-1(V653_D-1) ] Succ: [G:W-1(V655_D-1) ]
G:W-1(V655_D-1) Preds: [G:W-1(V654_D-1) ] Succ: [A:W-1(V656_D-1) ]
A:W-1(V656_D-1) Preds: [G:W-1(V655_D-1) ] Succ: [T:W-1(V657_D-1) ]
T:W-1(V657_D-1) Preds: [A:W-1(V656_D-1) ] Succ: [G:W-1(V658_D-1) ]
G:W-1(V658_D-1) Preds: [T:W-1(V657_D-1) ] Succ: [A:W-1(V659_D-1) ]
A:W-1(V659_D-1) Preds: [G:W-1(V658_D-1) ] Succ: [C:W-1(V660_D-1) ]
C:W-1(V660_D-1) Preds: [A:W-1(V659_D-1) ] Succ: [A:W-1(V661_D-1) ]
A:W-1(V661_D-1) Preds: [C:W-1(V660_D-1) ] Succ: [G:W-1(V662_D-1) ]
G:W-1(V662_D-1) Preds: [A:W-1(V661_D-1) ] Succ: [A:W-1(V663_D-1) ]
A:W-1(V663_D-1) Preds: [G:W-1(V662_D-1) ] Succ: [C:W-1(V664_D-1) ]
C:W-1(V664_D-1) Preds: [A:W-1(V663_D-1) ] Succ: [T:W-1(V665_D-1) ]
T:W-1(V665_D-1) Preds: [C:W-1(V664_D-1) ] Succ: [C:W-1(V666_D-1) ]
C:W-1(V666_D-1) Preds: [T:W-1(V665_D-1) ] Succ: [T:W-1(V667_D-1) ]
T:W-1(V667_D-1) Preds: [C:W-1(V666_D-1) ] Succ: [C:W-1(V668_D-1) ]
C:W-1(V668_D-1) Preds: [T:W-1(V667_D-1) ] Succ: [T:W-1(V669_D-1) ]
T:W-1(V669_D-1) Preds: [C:W-1(V668_D-1) ] Succ: [A:W-1(V670_D-1) ]
A:W-1(V670_D-1) Preds: [T:W-1(V669_D-1) ] Succ: [A:W-1(V671_D-1) ]
A:W-1(V671_D-1) Preds: [A:W-1(V670_D-1) ] Succ: [G:W-1(V672_D-1) ]
G:W-1(V672_D-1) Preds: [A:W-1(V671_D-1) ] Succ: [G:W-1(V673_D-1) ]
G:W-1(V673_D-1) Preds: [G:W-1(V672_D-1) ] Succ: [G:W-1(V674_D-1) ]
G:W-1(V674_D-1) Preds: [G:W-1(V673_D-1) ] Succ: [A:W-1(V675_D-1) ]
A:W-1(V675_D-1) Preds: [G:W-1(V674_D-1) ] Succ: [C:W-1(V676_D-1) ]
C:W-1(V676_D-1) Preds: [A:W-1(V675_D-1) ] Succ: [A:W-1(V677_D-1) ]
A:W-1(V677_D-1) Preds: [C:W-1(V676_D-1) ] Succ: [T:W-1(V678_D-1) ]
T:W-1(V678_D-1) Preds: [A:W-1(V677_D-1) ] Succ: [A:W-1(V679_D-1) ]
A:W-1(V679_D-1) Preds: [T:W-1(V678_D-1) ] Succ: [T:W-1(V680_D-1) ]
T:W-1(V680_D-1) Preds: [A:W-1(V679_D-1) ] Succ: [G:W-1(V681_D-1) ]
G:W-1(V681_D-1) Preds: [T:W-1(V680_D-1) ] Succ: [G:W-1(V682_D-1) ]
G:W-1(V682_D-1) Preds: [G:W-1(V681_D-1) ] Succ: [G:W-1(V683_D-1) ]
G:W-1(V683_D-1) Preds: [G:W-1(V682_D-1) ] Succ: [A:W-1(V684_D-1) ]
A:W-1(V684_D-1) Preds: [G:W-1(V683_D-1) ] Succ: [G:W-1(V685_D-1) ]
G:W-1(V685_D-1) Preds: [A:W-1(V684_D-1) ] Succ: [C:W-1(V686_D-1) ]
C:W-1(V686_D-1) Preds: [G:W-1(V685_D-1) ] Succ: [T:W-1(V687_D-1) ]
T:W-1(V687_D-1) Preds: [C:W-1(V686_D-1) ] Succ: [A:W-1(V688_D-1) ]
A:W-1(V688_D-1) Preds: [T:W-1(V687_D-1) ] Succ: [C:W-1(V689_D-1) ]
C:W-1(V689_D-1) Preds: [A:W-1(V688_D-1) ] Succ: [A:W-1(V690_D-1) ]
A:W-1(V690_D-1) Preds: [C:W-1(V689_D-1) ] Succ: [T:W-1(V691_D-1) ]
T:W-1(V691_D-1) Preds: [A:W-1(V690_D-1) ] Succ: [A:W-1(V692_D-1) ]
A:W-1(V692_D-1) Preds: [T:W-1(V691_D-1) ] Succ: [G:W-1(V693_D-1) ]
G:W-1(V693_D-1) Preds: [A:W-1(V692_D-1) ] Succ: [C:W-1(V694_D-1) ]
C:W-1(V694_D-1) Preds: [G:W-1(V693_D-1) ] Succ: [C:W-1(V695_D-1) ]
C:W-1(V695_D-1) Preds: [C:W-1(V694_D-1) ] Succ: [A:W-1(V696_D-1) ]
A:W-1(V696_D-1) Preds: [C:W-1(V695_D-1) ] Succ: [G:W-1(V697_D-1) ]
G:W-1(V697_D-1) Preds: [A:W-1(V696_D-1) ] Succ: [C:W-1(V698_D-1) ]
C:W-1(V698_D-1) Preds: [G:W-1(V697_D-1) ] Succ: [C:W-1(V699_D-1) ]
C:W-1(V699_D-1) Preds: [C:W-1(V698_D-1) ] Succ: [C:W-1(V700_D-1) ]
C:W-1(V700_D-1) Preds: [C:W-1(V699_D-1) ] Succ: [C:W-1(V701_D-1) ]
C:W-1(V701_D-1) Preds: [C:W-1(V700_D-1) ] Succ: [G:W-1(V702_D-1) ]
G:W-1(V702_D-1) Preds: [C:W-1(V701_D-1) ] Succ: [T:W-1(V703_D-1) ]
T:W-1(V703_D-1) Preds: [G:W-1(V702_D-1) ] Succ: [G:W-1(V704_D-1) ]
G:W-1(V704_D-1) Preds: [T:W-1(V703_D-1) ] Succ: [G:W-1(V705_D-1) ]
G:W-1(V705_D-1) Preds: [G:W-1(V704_D-1) ] Succ: [A:W-1(V706_D-1) ]
A:W-1(V706_D-1) Preds: [G:W-1(V705_D-1) ] Succ: [G:W-1(V707_D-1) ]
G:W-1(V707_D-1) Preds: [A:W-1(V706_D-1) ] Succ: [G:W-1(V708_D-1) ]
G:W-1(V708_D-1) Preds: [G:W-1(V707_D-1) ] Succ: [G:W-1(V709_D-1) ]
G:W-1(V709_D-1) Preds: [G:W-1(V708_D-1) ] Succ: [A:W-1(V710_D-1) ]
A:W-1(V710_D-1) Preds: [G:W-1(V709_D-1) ] Succ: [G:W-1(V711_D-1) ]
G:W-1(V711_D-1) Preds: [A:W-1(V710_D-1) ] Succ: [C:W-1(V712_D-1) ]
C:W-1(V712_D-1) Preds: [G:W-1(V711_D-1) ] Succ: [C:W-1(V713_D-1) ]
C:W-1(V713_D-1) Preds: [C:W-1(V712_D-1) ] Succ: [A:W-1(V714_D-1) ]
A:W-1(V714_D-1) Preds: [C:W-1(V713_D-1) ] Succ: [C:W-1(V715_D-1) ]
C:W-1(V715_D-1) Preds: [A:W-1(V714_D-1) ] Succ: [C:W-1(V716_D-1) ]
C:W-1(V716_D-1) Preds: [C:W-1(V715_D-1) ] Succ: [A:W-1(V717_D-1) ]
A:W-1(V717_D-1) Preds: [C:W-1(V716_D-1) C:W-1(V812_D-1) ] Succ: [G:W-1(V718_D-1) ]
G:W-1(V718_D-1) Preds: [A:W-1(V717_D-1) ] Succ: [C:W-1(V719_D-1) ]
C:W-1(V719_D-1) Preds: [G:W-1(V718_D-1) ] Succ: [C:W-1(V720_D-1) ]
C:W-1(V720_D-1) Preds: [C:W-1(V719_D-1) ] Succ: [A:W-1(V721_D-1) ]
A:W-1(V721_D-1) Preds: [C:W-1(V720_D-1) ] Succ: [C:W-1(V722_D-1) ]
C:W-1(V722_D-1) Preds: [A:W-1(V721_D-1) ] Succ: [A:W-1(V723_D-1) ]
A:W-1(V723_D-1) Preds: [C:W-1(V722_D-1) ] Succ: [G:W-1(V724_D-1) ]
G:W-1(V724_D-1) Preds: [A:W-1(V723_D-1) ] Succ: [G:W-1(V725_D-1) ]
G:W-1(V725_D-1) Preds: [G:W-1(V724_D-1) ] Succ: [T:W-1(V726_D-1) ]
T:W-1(V726_D-1) Preds: [G:W-1(V725_D-1) ] Succ: [A:W-1(V727_D-1) ]
A:W-1(V727_D-1) Preds: [T:W-1(V726_D-1) ] Succ: [C:W-1(V728_D-1) ]
C:W-1(V728_D-1) Preds: [A:W-1(V727_D-1) ] Succ: [C:W-1(V729_D-1) ]
C:W-1(V729_D-1) Preds: [C:W-1(V728_D-1) ] Succ: [T:W-1(V730_D-1) ]
T:W-1(V730_D-1) Preds: [C:W-1(V729_D-1) ] Succ: [G:W-1(V731_D-1) ]
G:W-1(V731_D-1) Preds: [T:W-1(V730_D-1) ] Succ: [A:W-1(V732_D-1) ]
A:W-1(V732_D-1) Preds: [G:W-1(V731_D-1) ] Succ: [T:W-1(V733_D-1) ]
T:W-1(V733_D-1) Preds: [A:W-1(V732_D-1) ] Succ: [G:W-1(V734_D-1) ]
G:W-1(V734_D-1) Preds: [T:W-1(V733_D-1) ] Succ: [G:W-1(V735_D-1) ]
G:W-1(V735_D-1) Preds: [G:W-1(V734_D-1) ] Succ: [A:W-1(V736_D-1) ]
A:W-1(V736_D-1) Preds: [G:W-1(V735_D-1) ] Succ: [A:W-1(V737_D-1) ]
A:W-1(V737_D-1) Preds: [A:W-1(V736_D-1) ] Succ: [A:W-1(V738_D-1) ]
A:W-1(V738_D-1) Preds: [A:W-1(V737_D-1) ] Succ: [T:W-1(V739_D-1) ]
T:W-1(V739_D-1) Preds: [A:W-1(V738_D-1) ] Succ: [G:W-1(V740_D-1) ]
G:W-1(V740_D-1) Preds: [T:W-1(V739_D-1) ] Succ: [C:W-1(V741_D-1) ]
C:W-1(V741_D-1) Preds: [G:W-1(V740_D-1) ] Succ: [C:W-1(V742_D-1) ]
C:W-1(V742_D-1) Preds: [C:W-1(V741_D-1) ] Succ: [G:W-1(V743_D-1) ]
G:W-1(V743_D-1) Preds: [C:W-1(V742_D-1) ] Succ: [G:W-1(V744_D-1) ]
G:W-1(V744_D-1) Preds: [G:W-1(V743_D-1) ] Succ: [C:W-1(V745_D-1) ]
C:W-1(V745_D-1) Preds: [G:W-1(V744_D-1) ] Succ: [T:W-1(V746_D-1) ]
T:W-1(V746_D-1) Preds: [C:W-1(V745_D-1) ] Succ: [C:W-1(V747_D-1) ]
C:W-1(V747_D-1) Preds: [T:W-1(V746_D-1) ] Succ: [A:W-1(V748_D-1) ]
A:W-1(V748_D-1) Preds: [C:W-1(V747_D-1) ] Succ: [C:W-1(V749_D-1) ]
C:W-1(V749_D-1) Preds: [A:W-1(V748_D-1) ] Succ: [T:W-1(V750_D-1) ]
T:W-1(V750_D-1) Preds: [C:W-1(V749_D-1) ] Succ: [T:W-1(V751_D-1) ]
T:W-1(V751_D-1) Preds: [T:W-1(V750_D-1) ] Succ: [C:W-1(V752_D-1) ]
C:W-1(V752_D-1) Preds: [T:W-1(V751_D-1) ] Succ: [C:W-1(V753_D-1) ]
C:W-1(V753_D-1) Preds: [C:W-1(V752_D-1) ] Succ: [T:W-1(V754_D-1) ]
T:W-1(V754_D-1) Preds: [C:W-1(V753_D-1) ] Succ: [G:W-1(V755_D-1) ]
G:W-1(V755_D-1) Preds: [T:W-1(V754_D-1) ] Succ: [T:W-1(V756_D-1) ]
T:W-1(V756_D-1) Preds: [G:W-1(V755_D-1) ] Succ: [G:W-1(V757_D-1) ]
G:W-1(V757_D-1) Preds: [T:W-1(V756_D-1) ] Succ: [A:W-1(V758_D-1) ]
A:W-1(V758_D-1) Preds: [G:W-1(V757_D-1) ] Succ: []
GCTAGGGGAAATAGGGGAGCTCCA:W0(V786_D-1) Preds: [] Succ: [A:W-1(V787_D-1) ]
A:W-1(V787_D-1) Preds: [GCTAGGGGAAATAGGGGAGCTCCA:W0(V786_D-1) ] Succ: [A:W-1(V788_D-1) ]
A:W-1(V788_D-1) Preds: [A:W-1(V787_D-1) ] Succ: [C:W-1(V789_D-1) ]
C:W-1(V789_D-1) Preds: [A:W-1(V788_D-1) ] Succ: [C:W-1(V790_D-1) ]
C:W-1(V790_D-1) Preds: [C:W-1(V789_D-1) ] Succ: [C:W-1(V791_D-1) ]
C:W-1(V791_D-1) Preds: [C:W-1(V790_D-1) ] Succ: [A:W-1(V792_D-1) ]
A:W-1(V792_D-1) Preds: [C:W-1(V791_D-1) ] Succ: [G:W-1(V793_D-1) ]
G:W-1(V793_D-1) Preds: [A:W-1(V792_D-1) ] Succ: [C:W-1(V794_D-1) ]
C:W-1(V794_D-1) Preds: [G:W-1(V793_D-1) ] Succ: [C:W-1(V795_D-1) ]
C:W-1(V795_D-1) Preds: [C:W-1(V794_D-1) ] Succ: [C:W-1(V796_D-1) ]
C:W-1(V796_D-1) Preds: [C:W-1(V795_D-1) ] Succ: [C:W-1(V797_D-1) ]
C:W-1(V797_D-1) Preds: [C:W-1(V796_D-1) ] Succ: [G:W-1(V798_D-1) ]
G:W-1(V798_D-1) Preds: [C:W-1(V797_D-1) ] Succ: [T:W-1(V799_D-1) ]
T:W-1(V799_D-1) Preds: [G:W-1(V798_D-1) ] Succ: [G:W-1(V800_D-1) ]
G:W-1(V800_D-1) Preds: [T:W-1(V799_D-1) ] Succ: [G:W-1(V801_D-1) ]
G:W-1(V801_D-1) Preds: [G:W-1(V800_D-1) ] Succ: [A:W-1(V802_D-1) ]
A:W-1(V802_D-1) Preds: [G:W-1(V801_D-1) ] Succ: [G:W-1(V803_D-1) ]
G:W-1(V803_D-1) Preds: [A:W-1(V802_D-1) ] Succ: [G:W-1(V804_D-1) ]
G:W-1(V804_D-1) Preds: [G:W-1(V803_D-1) ] Succ: [G:W-1(V805_D-1) ]
G:W-1(V805_D-1) Preds: [G:W-1(V804_D-1) ] Succ: [A:W-1(V806_D-1) ]
A:W-1(V806_D-1) Preds: [G:W-1(V805_D-1) ] Succ: [G:W-1(V807_D-1) ]
G:W-1(V807_D-1) Preds: [A:W-1(V806_D-1) ] Succ: [C:W-1(V808_D-1) ]
C:W-1(V808_D-1) Preds: [G:W-1(V807_D-1) ] Succ: [C:W-1(V809_D-1) ]
C:W-1(V809_D-1) Preds: [C:W-1(V808_D-1) ] Succ: [A:W-1(V810_D-1) ]
A:W-1(V810_D-1) Preds: [C:W-1(V809_D-1) ] Succ: [C:W-1(V811_D-1) ]
C:W-1(V811_D-1) Preds: [A:W-1(V810_D-1) ] Succ: [C:W-1(V812_D-1) ]
C:W-1(V812_D-1) Preds: [C:W-1(V811_D-1) ] Succ: [A:W-1(V717_D-1) ]
C:W-1(V813_D-1) Preds: [T:W-1(V524_D-1) ] Succ: [A:W-1(V814_D-1) ]
A:W-1(V814_D-1) Preds: [C:W-1(V813_D-1) ] Succ: [G:W-1(V815_D-1) ]
G:W-1(V815_D-1) Preds: [A:W-1(V814_D-1) ] Succ: [C:W-1(V816_D-1) ]
C:W-1(V816_D-1) Preds: [G:W-1(V815_D-1) ] Succ: [A:W-1(V817_D-1) ]
A:W-1(V817_D-1) Preds: [C:W-1(V816_D-1) ] Succ: [C:W-1(V818_D-1) ]
C:W-1(V818_D-1) Preds: [A:W-1(V817_D-1) ] Succ: [T:W-1(V819_D-1) ]
T:W-1(V819_D-1) Preds: [C:W-1(V818_D-1) ] Succ: [C:W-1(V820_D-1) ]
C:W-1(V820_D-1) Preds: [T:W-1(V819_D-1) ] Succ: [T:W-1(V821_D-1) ]
T:W-1(V821_D-1) Preds: [C:W-1(V820_D-1) ] Succ: [G:W-1(V822_D-1) ]
G:W-1(V822_D-1) Preds: [T:W-1(V821_D-1) ] Succ: [A:W-1(V823_D-1) ]
A:W-1(V823_D-1) Preds: [G:W-1(V822_D-1) ] Succ: [A:W-1(V824_D-1) ]
A:W-1(V824_D-1) Preds: [A:W-1(V823_D-1) ] Succ: [C:W-1(V825_D-1) ]
C:W-1(V825_D-1) Preds: [A:W-1(V824_D-1) ] Succ: [C:W-1(V826_D-1) ]
C:W-1(V826_D-1) Preds: [C:W-1(V825_D-1) ] Succ: [C:W-1(V827_D-1) ]
C:W-1(V827_D-1) Preds: [C:W-1(V826_D-1) ] Succ: [T:W-1(V828_D-1) ]
T:W-1(V828_D-1) Preds: [C:W-1(V827_D-1) ] Succ: [G:W-1(V829_D-1) ]
G:W-1(V829_D-1) Preds: [T:W-1(V828_D-1) ] Succ: [T:W-1(V830_D-1) ]
T:W-1(V830_D-1) Preds: [G:W-1(V829_D-1) ] Succ: [G:W-1(V831_D-1) ]
G:W-1(V831_D-1) Preds: [T:W-1(V830_D-1) ] Succ: [A:W-1(V832_D-1) ]
A:W-1(V832_D-1) Preds: [G:W-1(V831_D-1) ] Succ: [G:W-1(V833_D-1) ]
G:W-1(V833_D-1) Preds: [A:W-1(V832_D-1) ] Succ: [G:W-1(V834_D-1) ]
G:W-1(V834_D-1) Preds: [G:W-1(V833_D-1) ] Succ: [C:W-1(V835_D-1) ]
C:W-1(V835_D-1) Preds: [G:W-1(V834_D-1) ] Succ: [A:W-1(V836_D-1) ]
A:W-1(V836_D-1) Preds: [C:W-1(V835_D-1) ] Succ: [A:W-1(V549_D-1) ]
G:W-1(V885_D-1) Preds: [G:W-1(V415_D-1) ] Succ: [C:W-1(V886_D-1) ]
C:W-1(V886_D-1) Preds: [G:W-1(V885_D-1) ] Succ: [T:W-1(V887_D-1) ]
T:W-1(V887_D-1) Preds: [C:W-1(V886_D-1) ] Succ: [C:W-1(V888_D-1) ]
C:W-1(V888_D-1) Preds: [T:W-1(V887_D-1) ] Succ: [A:W-1(V889_D-1) ]
A:W-1(V889_D-1) Preds: [C:W-1(V888_D-1) ] Succ: [T:W-1(V890_D-1) ]
T:W-1(V890_D-1) Preds: [A:W-1(V889_D-1) ] Succ: [C:W-1(V891_D-1) ]
C:W-1(V891_D-1) Preds: [T:W-1(V890_D-1) ] Succ: [A:W-1(V892_D-1) ]
A:W-1(V892_D-1) Preds: [C:W-1(V891_D-1) ] Succ: [G:W-1(V893_D-1) ]
G:W-1(V893_D-1) Preds: [A:W-1(V892_D-1) ] Succ: [C:W-1(V894_D-1) ]
C:W-1(V894_D-1) Preds: [G:W-1(V893_D-1) ] Succ: [A:W-1(V895_D-1) ]
A:W-1(V895_D-1) Preds: [C:W-1(V894_D-1) ] Succ: [A:W-1(V896_D-1) ]
A:W-1(V896_D-1) Preds: [A:W-1(V895_D-1) ] Succ: [G:W-1(V897_D-1) ]
G:W-1(V897_D-1) Preds: [A:W-1(V896_D-1) ] Succ: [A:W-1(V898_D-1) ]
A:W-1(V898_D-1) Preds: [G:W-1(V897_D-1) ] Succ: [A:W-1(V899_D-1) ]
A:W-1(V899_D-1) Preds: [A:W-1(V898_D-1) ] Succ: [G:W-1(V900_D-1) ]
G:W-1(V900_D-1) Preds: [A:W-1(V899_D-1) ] Succ: [A:W-1(V901_D-1) ]
A:W-1(V901_D-1) Preds: [G:W-1(V900_D-1) ] Succ: [A:W-1(V902_D-1) ]
A:W-1(V902_D-1) Preds: [A:W-1(V901_D-1) ] Succ: [A:W-1(V903_D-1) ]
A:W-1(V903_D-1) Preds: [A:W-1(V902_D-1) ] Succ: [T:W-1(V904_D-1) ]
T:W-1(V904_D-1) Preds: [A:W-1(V903_D-1) ] Succ: [C:W-1(V905_D-1) ]
C:W-1(V905_D-1) Preds: [T:W-1(V904_D-1) ] Succ: [T:W-1(V906_D-1) ]
T:W-1(V906_D-1) Preds: [C:W-1(V905_D-1) ] Succ: [T:W-1(V907_D-1) ]
T:W-1(V907_D-1) Preds: [T:W-1(V906_D-1) ] Succ: [T:W-1(V908_D-1) ]
T:W-1(V908_D-1) Preds: [T:W-1(V907_D-1) ] Succ: [C:W-1(V440_D-1) ]
AGAATACAAAATGCCTTCCTCCAG:W0(V945_D-1) Preds: [] Succ: [C:W-1(V946_D-1) ]
C:W-1(V946_D-1) Preds: [AGAATACAAAATGCCTTCCTCCAG:W0(V945_D-1) ] Succ: [C:W-1(V947_D-1) ]
C:W-1(V947_D-1) Preds: [C:W-1(V946_D-1) ] Succ: [T:W-1(V948_D-1) ]
T:W-1(V948_D-1) Preds: [C:W-1(V947_D-1) ] Succ: [C:W-1(V949_D-1) ]
C:W-1(V949_D-1) Preds: [T:W-1(V948_D-1) ] Succ: [A:W-1(V950_D-1) ]
A:W-1(V950_D-1) Preds: [C:W-1(V949_D-1) ] Succ: [T:W-1(V951_D-1) ]
T:W-1(V951_D-1) Preds: [A:W-1(V950_D-1) ] Succ: [C:W-1(V952_D-1) ]
C:W-1(V952_D-1) Preds: [T:W-1(V951_D-1) ] Succ: [A:W-1(V953_D-1) ]
A:W-1(V953_D-1) Preds: [C:W-1(V952_D-1) ] Succ: [G:W-1(V954_D-1) ]
G:W-1(V954_D-1) Preds: [A:W-1(V953_D-1) ] Succ: [C:W-1(V955_D-1) ]
C:W-1(V955_D-1) Preds: [G:W-1(V954_D-1) ] Succ: [A:W-1(V956_D-1) ]
A:W-1(V956_D-1) Preds: [C:W-1(V955_D-1) ] Succ: [G:W-1(V957_D-1) ]
G:W-1(V957_D-1) Preds: [A:W-1(V956_D-1) ] Succ: [G:W-1(V958_D-1) ]
G:W-1(V958_D-1) Preds: [G:W-1(V957_D-1) ] Succ: [A:W-1(V959_D-1) ]
A:W-1(V959_D-1) Preds: [G:W-1(V958_D-1) ] Succ: [A:W-1(V960_D-1) ]
A:W-1(V960_D-1) Preds: [A:W-1(V959_D-1) ] Succ: [G:W-1(V961_D-1) ]
G:W-1(V961_D-1) Preds: [A:W-1(V960_D-1) ] Succ: [A:W-1(V962_D-1) ]
A:W-1(V962_D-1) Preds: [G:W-1(V961_D-1) ] Succ: [A:W-1(V963_D-1) ]
A:W-1(V963_D-1) Preds: [A:W-1(V962_D-1) ] Succ: [A:W-1(V964_D-1) ]
A:W-1(V964_D-1) Preds: [A:W-1(V963_D-1) ] Succ: [T:W-1(V965_D-1) ]
T:W-1(V965_D-1) Preds: [A:W-1(V964_D-1) ] Succ: [C:W-1(V966_D-1) ]
C:W-1(V966_D-1) Preds: [T:W-1(V965_D-1) ] Succ: [T:W-1(V967_D-1) ]
T:W-1(V967_D-1) Preds: [C:W-1(V966_D-1) ] Succ: [T:W-1(V968_D-1) ]
T:W-1(V968_D-1) Preds: [T:W-1(V967_D-1) ] Succ: [T:W-1(V969_D-1) ]
T:W-1(V969_D-1) Preds: [T:W-1(V968_D-1) ] Succ: [C:W-1(V970_D-1) ]
C:W-1(V970_D-1) Preds: [T:W-1(V969_D-1) ] Succ: [T:W-1(V971_D-1) ]
T:W-1(V971_D-1) Preds: [C:W-1(V970_D-1) ] Succ: [T:W-1(V972_D-1) ]
T:W-1(V972_D-1) Preds: [T:W-1(V971_D-1) ] Succ: [T:W-1(V973_D-1) ]
T:W-1(V973_D-1) Preds: [T:W-1(V972_D-1) ] Succ: [C:W-1(V974_D-1) ]
C:W-1(V974_D-1) Preds: [T:W-1(V973_D-1) ] Succ: [C:W-1(V975_D-1) ]
C:W-1(V975_D-1) Preds: [C:W-1(V974_D-1) ] Succ: [A:W-1(V976_D-1) ]
A:W-1(V976_D-1) Preds: [C:W-1(V975_D-1) ] Succ: [A:W-1(V977_D-1) ]
A:W-1(V977_D-1) Preds: [A:W-1(V976_D-1) ] Succ: [G:W-1(V978_D-1) ]
G:W-1(V978_D-1) Preds: [A:W-1(V977_D-1) ] Succ: [T:W-1(V979_D-1) ]
T:W-1(V979_D-1) Preds: [G:W-1(V978_D-1) ] Succ: [A:W-1(V980_D-1) ]
A:W-1(V980_D-1) Preds: [T:W-1(V979_D-1) ] Succ: [G:W-1(V451_D-1) ]
compactLinearPaths()
SECTION
=================
COMPACTING THE GRAPH
=================
Found potential edge: Edge(380->381,w:2.0) between GGCCACACGATGGCTTATCACGTC:W0(V380_D-1) and C:W-1(V381_D-1)
removing vertex C:W-1(V381_D-1) was concatenated into GGCCACACGATGGCTTATCACGTCC:W0(V380_D-1)
Want to move edge Edge(381->382,w:2.0)(C:W-1(V381_D-1)->A:W-1(V382_D-1)) to (GGCCACACGATGGCTTATCACGTCC:W0(V380_D-1)->A:W-1(V382_D-1)
	adding edge: GGCCACACGATGGCTTATCACGTCC:W0(V380_D-1) to A:W-1(V382_D-1)
removing edge Edge(381->382,w:2.0)(C:W-1(V381_D-1)->A:W-1(V382_D-1))
removing edge Edge(380->381,w:2.0)(GGCCACACGATGGCTTATCACGTCC:W0(V380_D-1)->C:W-1(V381_D-1))
Found potential edge: Edge(380->382,w:2.0) between GGCCACACGATGGCTTATCACGTCC:W0(V380_D-1) and A:W-1(V382_D-1)
removing vertex A:W-1(V382_D-1) was concatenated into GGCCACACGATGGCTTATCACGTCCA:W0(V380_D-1)
Want to move edge Edge(382->383,w:2.0)(A:W-1(V382_D-1)->C:W-1(V383_D-1)) to (GGCCACACGATGGCTTATCACGTCCA:W0(V380_D-1)->C:W-1(V383_D-1)
	adding edge: GGCCACACGATGGCTTATCACGTCCA:W0(V380_D-1) to C:W-1(V383_D-1)
removing edge Edge(382->383,w:2.0)(A:W-1(V382_D-1)->C:W-1(V383_D-1))
removing edge Edge(380->382,w:2.0)(GGCCACACGATGGCTTATCACGTCCA:W0(V380_D-1)->A:W-1(V382_D-1))
Found potential edge: Edge(380->383,w:2.0) between GGCCACACGATGGCTTATCACGTCCA:W0(V380_D-1) and C:W-1(V383_D-1)
removing vertex C:W-1(V383_D-1) was concatenated into GGCCACACGATGGCTTATCACGTCCAC:W0(V380_D-1)
Want to move edge Edge(383->384,w:2.0)(C:W-1(V383_D-1)->A:W-1(V384_D-1)) to (GGCCACACGATGGCTTATCACGTCCAC:W0(V380_D-1)->A:W-1(V384_D-1)
	adding edge: GGCCACACGATGGCTTATCACGTCCAC:W0(V380_D-1) to A:W-1(V384_D-1)
removing edge Edge(383->384,w:2.0)(C:W-1(V383_D-1)->A:W-1(V384_D-1))
removing edge Edge(380->383,w:2.0)(GGCCACACGATGGCTTATCACGTCCAC:W0(V380_D-1)->C:W-1(V383_D-1))
Found potential edge: Edge(380->384,w:2.0) between GGCCACACGATGGCTTATCACGTCCAC:W0(V380_D-1) and A:W-1(V384_D-1)
removing vertex A:W-1(V384_D-1) was concatenated into GGCCACACGATGGCTTATCACGTCCACA:W0(V380_D-1)
Want to move edge Edge(384->385,w:2.0)(A:W-1(V384_D-1)->T:W-1(V385_D-1)) to (GGCCACACGATGGCTTATCACGTCCACA:W0(V380_D-1)->T:W-1(V385_D-1)
	adding edge: GGCCACACGATGGCTTATCACGTCCACA:W0(V380_D-1) to T:W-1(V385_D-1)
removing edge Edge(384->385,w:2.0)(A:W-1(V384_D-1)->T:W-1(V385_D-1))
removing edge Edge(380->384,w:2.0)(GGCCACACGATGGCTTATCACGTCCACA:W0(V380_D-1)->A:W-1(V384_D-1))
Found potential edge: Edge(380->385,w:2.0) between GGCCACACGATGGCTTATCACGTCCACA:W0(V380_D-1) and T:W-1(V385_D-1)
removing vertex T:W-1(V385_D-1) was concatenated into GGCCACACGATGGCTTATCACGTCCACAT:W0(V380_D-1)
Want to move edge Edge(385->386,w:2.0)(T:W-1(V385_D-1)->T:W-1(V386_D-1)) to (GGCCACACGATGGCTTATCACGTCCACAT:W0(V380_D-1)->T:W-1(V386_D-1)
	adding edge: GGCCACACGATGGCTTATCACGTCCACAT:W0(V380_D-1) to T:W-1(V386_D-1)
removing edge Edge(385->386,w:2.0)(T:W-1(V385_D-1)->T:W-1(V386_D-1))
removing edge Edge(380->385,w:2.0)(GGCCACACGATGGCTTATCACGTCCACAT:W0(V380_D-1)->T:W-1(V385_D-1))
Found potential edge: Edge(380->386,w:2.0) between GGCCACACGATGGCTTATCACGTCCACAT:W0(V380_D-1) and T:W-1(V386_D-1)
removing vertex T:W-1(V386_D-1) was concatenated into GGCCACACGATGGCTTATCACGTCCACATT:W0(V380_D-1)
Want to move edge Edge(386->387,w:2.0)(T:W-1(V386_D-1)->T:W-1(V387_D-1)) to (GGCCACACGATGGCTTATCACGTCCACATT:W0(V380_D-1)->T:W-1(V387_D-1)
	adding edge: GGCCACACGATGGCTTATCACGTCCACATT:W0(V380_D-1) to T:W-1(V387_D-1)
removing edge Edge(386->387,w:2.0)(T:W-1(V386_D-1)->T:W-1(V387_D-1))
removing edge Edge(380->386,w:2.0)(GGCCACACGATGGCTTATCACGTCCACATT:W0(V380_D-1)->T:W-1(V386_D-1))
Found potential edge: Edge(380->387,w:2.0) between GGCCACACGATGGCTTATCACGTCCACATT:W0(V380_D-1) and T:W-1(V387_D-1)
removing vertex T:W-1(V387_D-1) was concatenated into GGCCACACGA...GTCCACATTT:W0(V380_D-1)
Want to move edge Edge(387->388,w:2.0)(T:W-1(V387_D-1)->C:W-1(V388_D-1)) to (GGCCACACGA...GTCCACATTT:W0(V380_D-1)->C:W-1(V388_D-1)
	adding edge: GGCCACACGA...GTCCACATTT:W0(V380_D-1) to C:W-1(V388_D-1)
removing edge Edge(387->388,w:2.0)(T:W-1(V387_D-1)->C:W-1(V388_D-1))
removing edge Edge(380->387,w:2.0)(GGCCACACGA...GTCCACATTT:W0(V380_D-1)->T:W-1(V387_D-1))
Found potential edge: Edge(380->388,w:2.0) between GGCCACACGA...GTCCACATTT:W0(V380_D-1) and C:W-1(V388_D-1)
removing vertex C:W-1(V388_D-1) was concatenated into GGCCACACGA...TCCACATTTC:W1(V380_D-1)
Want to move edge Edge(388->389,w:2.0)(C:W-1(V388_D-1)->T:W-1(V389_D-1)) to (GGCCACACGA...TCCACATTTC:W1(V380_D-1)->T:W-1(V389_D-1)
	adding edge: GGCCACACGA...TCCACATTTC:W1(V380_D-1) to T:W-1(V389_D-1)
removing edge Edge(388->389,w:2.0)(C:W-1(V388_D-1)->T:W-1(V389_D-1))
removing edge Edge(380->388,w:2.0)(GGCCACACGA...TCCACATTTC:W1(V380_D-1)->C:W-1(V388_D-1))
Found potential edge: Edge(380->389,w:2.0) between GGCCACACGA...TCCACATTTC:W1(V380_D-1) and T:W-1(V389_D-1)
removing vertex T:W-1(V389_D-1) was concatenated into GGCCACACGA...CCACATTTCT:W1(V380_D-1)
Want to move edge Edge(389->390,w:2.0)(T:W-1(V389_D-1)->A:W-1(V390_D-1)) to (GGCCACACGA...CCACATTTCT:W1(V380_D-1)->A:W-1(V390_D-1)
	adding edge: GGCCACACGA...CCACATTTCT:W1(V380_D-1) to A:W-1(V390_D-1)
removing edge Edge(389->390,w:2.0)(T:W-1(V389_D-1)->A:W-1(V390_D-1))
removing edge Edge(380->389,w:2.0)(GGCCACACGA...CCACATTTCT:W1(V380_D-1)->T:W-1(V389_D-1))
Found potential edge: Edge(380->390,w:2.0) between GGCCACACGA...CCACATTTCT:W1(V380_D-1) and A:W-1(V390_D-1)
removing vertex A:W-1(V390_D-1) was concatenated into GGCCACACGA...CACATTTCTA:W1(V380_D-1)
Want to move edge Edge(390->391,w:2.0)(A:W-1(V390_D-1)->C:W-1(V391_D-1)) to (GGCCACACGA...CACATTTCTA:W1(V380_D-1)->C:W-1(V391_D-1)
	adding edge: GGCCACACGA...CACATTTCTA:W1(V380_D-1) to C:W-1(V391_D-1)
removing edge Edge(390->391,w:2.0)(A:W-1(V390_D-1)->C:W-1(V391_D-1))
removing edge Edge(380->390,w:2.0)(GGCCACACGA...CACATTTCTA:W1(V380_D-1)->A:W-1(V390_D-1))
Found potential edge: Edge(380->391,w:2.0) between GGCCACACGA...CACATTTCTA:W1(V380_D-1) and C:W-1(V391_D-1)
removing vertex C:W-1(V391_D-1) was concatenated into GGCCACACGA...ACATTTCTAC:W1(V380_D-1)
Want to move edge Edge(391->392,w:2.0)(C:W-1(V391_D-1)->T:W-1(V392_D-1)) to (GGCCACACGA...ACATTTCTAC:W1(V380_D-1)->T:W-1(V392_D-1)
	adding edge: GGCCACACGA...ACATTTCTAC:W1(V380_D-1) to T:W-1(V392_D-1)
removing edge Edge(391->392,w:2.0)(C:W-1(V391_D-1)->T:W-1(V392_D-1))
removing edge Edge(380->391,w:2.0)(GGCCACACGA...ACATTTCTAC:W1(V380_D-1)->C:W-1(V391_D-1))
Found potential edge: Edge(380->392,w:2.0) between GGCCACACGA...ACATTTCTAC:W1(V380_D-1) and T:W-1(V392_D-1)
removing vertex T:W-1(V392_D-1) was concatenated into GGCCACACGA...CATTTCTACT:W1(V380_D-1)
Want to move edge Edge(392->393,w:2.0)(T:W-1(V392_D-1)->G:W-1(V393_D-1)) to (GGCCACACGA...CATTTCTACT:W1(V380_D-1)->G:W-1(V393_D-1)
	adding edge: GGCCACACGA...CATTTCTACT:W1(V380_D-1) to G:W-1(V393_D-1)
removing edge Edge(392->393,w:2.0)(T:W-1(V392_D-1)->G:W-1(V393_D-1))
removing edge Edge(380->392,w:2.0)(GGCCACACGA...CATTTCTACT:W1(V380_D-1)->T:W-1(V392_D-1))
Found potential edge: Edge(380->393,w:2.0) between GGCCACACGA...CATTTCTACT:W1(V380_D-1) and G:W-1(V393_D-1)
removing vertex G:W-1(V393_D-1) was concatenated into GGCCACACGA...ATTTCTACTG:W1(V380_D-1)
Want to move edge Edge(393->394,w:2.0)(G:W-1(V393_D-1)->G:W-1(V394_D-1)) to (GGCCACACGA...ATTTCTACTG:W1(V380_D-1)->G:W-1(V394_D-1)
	adding edge: GGCCACACGA...ATTTCTACTG:W1(V380_D-1) to G:W-1(V394_D-1)
removing edge Edge(393->394,w:2.0)(G:W-1(V393_D-1)->G:W-1(V394_D-1))
removing edge Edge(380->393,w:2.0)(GGCCACACGA...ATTTCTACTG:W1(V380_D-1)->G:W-1(V393_D-1))
Found potential edge: Edge(380->394,w:2.0) between GGCCACACGA...ATTTCTACTG:W1(V380_D-1) and G:W-1(V394_D-1)
removing vertex G:W-1(V394_D-1) was concatenated into GGCCACACGA...TTTCTACTGG:W1(V380_D-1)
Want to move edge Edge(394->395,w:2.0)(G:W-1(V394_D-1)->C:W-1(V395_D-1)) to (GGCCACACGA...TTTCTACTGG:W1(V380_D-1)->C:W-1(V395_D-1)
	adding edge: GGCCACACGA...TTTCTACTGG:W1(V380_D-1) to C:W-1(V395_D-1)
removing edge Edge(394->395,w:2.0)(G:W-1(V394_D-1)->C:W-1(V395_D-1))
removing edge Edge(380->394,w:2.0)(GGCCACACGA...TTTCTACTGG:W1(V380_D-1)->G:W-1(V394_D-1))
Found potential edge: Edge(380->395,w:2.0) between GGCCACACGA...TTTCTACTGG:W1(V380_D-1) and C:W-1(V395_D-1)
removing vertex C:W-1(V395_D-1) was concatenated into GGCCACACGA...TTCTACTGGC:W1(V380_D-1)
Want to move edge Edge(395->396,w:2.0)(C:W-1(V395_D-1)->T:W-1(V396_D-1)) to (GGCCACACGA...TTCTACTGGC:W1(V380_D-1)->T:W-1(V396_D-1)
	adding edge: GGCCACACGA...TTCTACTGGC:W1(V380_D-1) to T:W-1(V396_D-1)
removing edge Edge(395->396,w:2.0)(C:W-1(V395_D-1)->T:W-1(V396_D-1))
removing edge Edge(380->395,w:2.0)(GGCCACACGA...TTCTACTGGC:W1(V380_D-1)->C:W-1(V395_D-1))
Found potential edge: Edge(380->396,w:2.0) between GGCCACACGA...TTCTACTGGC:W1(V380_D-1) and T:W-1(V396_D-1)
removing vertex T:W-1(V396_D-1) was concatenated into GGCCACACGA...TCTACTGGCT:W1(V380_D-1)
Want to move edge Edge(396->397,w:2.0)(T:W-1(V396_D-1)->A:W-1(V397_D-1)) to (GGCCACACGA...TCTACTGGCT:W1(V380_D-1)->A:W-1(V397_D-1)
	adding edge: GGCCACACGA...TCTACTGGCT:W1(V380_D-1) to A:W-1(V397_D-1)
removing edge Edge(396->397,w:2.0)(T:W-1(V396_D-1)->A:W-1(V397_D-1))
removing edge Edge(380->396,w:2.0)(GGCCACACGA...TCTACTGGCT:W1(V380_D-1)->T:W-1(V396_D-1))
Found potential edge: Edge(380->397,w:2.0) between GGCCACACGA...TCTACTGGCT:W1(V380_D-1) and A:W-1(V397_D-1)
removing vertex A:W-1(V397_D-1) was concatenated into GGCCACACGA...CTACTGGCTA:W1(V380_D-1)
Want to move edge Edge(397->398,w:2.0)(A:W-1(V397_D-1)->C:W-1(V398_D-1)) to (GGCCACACGA...CTACTGGCTA:W1(V380_D-1)->C:W-1(V398_D-1)
	adding edge: GGCCACACGA...CTACTGGCTA:W1(V380_D-1) to C:W-1(V398_D-1)
removing edge Edge(397->398,w:2.0)(A:W-1(V397_D-1)->C:W-1(V398_D-1))
removing edge Edge(380->397,w:2.0)(GGCCACACGA...CTACTGGCTA:W1(V380_D-1)->A:W-1(V397_D-1))
Found potential edge: Edge(380->398,w:2.0) between GGCCACACGA...CTACTGGCTA:W1(V380_D-1) and C:W-1(V398_D-1)
removing vertex C:W-1(V398_D-1) was concatenated into GGCCACACGA...TACTGGCTAC:W1(V380_D-1)
Want to move edge Edge(398->399,w:2.0)(C:W-1(V398_D-1)->A:W-1(V399_D-1)) to (GGCCACACGA...TACTGGCTAC:W1(V380_D-1)->A:W-1(V399_D-1)
	adding edge: GGCCACACGA...TACTGGCTAC:W1(V380_D-1) to A:W-1(V399_D-1)
removing edge Edge(398->399,w:2.0)(C:W-1(V398_D-1)->A:W-1(V399_D-1))
removing edge Edge(380->398,w:2.0)(GGCCACACGA...TACTGGCTAC:W1(V380_D-1)->C:W-1(V398_D-1))
Found potential edge: Edge(380->399,w:2.0) between GGCCACACGA...TACTGGCTAC:W1(V380_D-1) and A:W-1(V399_D-1)
removing vertex A:W-1(V399_D-1) was concatenated into GGCCACACGA...ACTGGCTACA:W1(V380_D-1)
Want to move edge Edge(399->400,w:2.0)(A:W-1(V399_D-1)->A:W-1(V400_D-1)) to (GGCCACACGA...ACTGGCTACA:W1(V380_D-1)->A:W-1(V400_D-1)
	adding edge: GGCCACACGA...ACTGGCTACA:W1(V380_D-1) to A:W-1(V400_D-1)
removing edge Edge(399->400,w:2.0)(A:W-1(V399_D-1)->A:W-1(V400_D-1))
removing edge Edge(380->399,w:2.0)(GGCCACACGA...ACTGGCTACA:W1(V380_D-1)->A:W-1(V399_D-1))
Found potential edge: Edge(380->400,w:2.0) between GGCCACACGA...ACTGGCTACA:W1(V380_D-1) and A:W-1(V400_D-1)
removing vertex A:W-1(V400_D-1) was concatenated into GGCCACACGA...CTGGCTACAA:W1(V380_D-1)
Want to move edge Edge(400->401,w:2.0)(A:W-1(V400_D-1)->A:W-1(V401_D-1)) to (GGCCACACGA...CTGGCTACAA:W1(V380_D-1)->A:W-1(V401_D-1)
	adding edge: GGCCACACGA...CTGGCTACAA:W1(V380_D-1) to A:W-1(V401_D-1)
removing edge Edge(400->401,w:2.0)(A:W-1(V400_D-1)->A:W-1(V401_D-1))
removing edge Edge(380->400,w:2.0)(GGCCACACGA...CTGGCTACAA:W1(V380_D-1)->A:W-1(V400_D-1))
Found potential edge: Edge(380->401,w:2.0) between GGCCACACGA...CTGGCTACAA:W1(V380_D-1) and A:W-1(V401_D-1)
removing vertex A:W-1(V401_D-1) was concatenated into GGCCACACGA...TGGCTACAAA:W1(V380_D-1)
Want to move edge Edge(401->402,w:4.0)(A:W-1(V401_D-1)->C:W-1(V402_D-1)) to (GGCCACACGA...TGGCTACAAA:W1(V380_D-1)->C:W-1(V402_D-1)
	adding edge: GGCCACACGA...TGGCTACAAA:W1(V380_D-1) to C:W-1(V402_D-1)
removing edge Edge(401->402,w:4.0)(A:W-1(V401_D-1)->C:W-1(V402_D-1))
removing edge Edge(380->401,w:2.0)(GGCCACACGA...TGGCTACAAA:W1(V380_D-1)->A:W-1(V401_D-1))
Found potential edge: Edge(380->402,w:4.0) between GGCCACACGA...TGGCTACAAA:W1(V380_D-1) and C:W-1(V402_D-1)
removing vertex C:W-1(V402_D-1) was concatenated into GGCCACACGA...GGCTACAAAC:W1(V380_D-1)
Want to move edge Edge(402->403,w:4.0)(C:W-1(V402_D-1)->A:W-1(V403_D-1)) to (GGCCACACGA...GGCTACAAAC:W1(V380_D-1)->A:W-1(V403_D-1)
	adding edge: GGCCACACGA...GGCTACAAAC:W1(V380_D-1) to A:W-1(V403_D-1)
removing edge Edge(402->403,w:4.0)(C:W-1(V402_D-1)->A:W-1(V403_D-1))
removing edge Edge(380->402,w:4.0)(GGCCACACGA...GGCTACAAAC:W1(V380_D-1)->C:W-1(V402_D-1))
Found potential edge: Edge(380->403,w:4.0) between GGCCACACGA...GGCTACAAAC:W1(V380_D-1) and A:W-1(V403_D-1)
removing vertex A:W-1(V403_D-1) was concatenated into GGCCACACGA...GCTACAAACA:W1(V380_D-1)
Want to move edge Edge(403->404,w:4.0)(A:W-1(V403_D-1)->G:W-1(V404_D-1)) to (GGCCACACGA...GCTACAAACA:W1(V380_D-1)->G:W-1(V404_D-1)
	adding edge: GGCCACACGA...GCTACAAACA:W1(V380_D-1) to G:W-1(V404_D-1)
removing edge Edge(403->404,w:4.0)(A:W-1(V403_D-1)->G:W-1(V404_D-1))
removing edge Edge(380->403,w:4.0)(GGCCACACGA...GCTACAAACA:W1(V380_D-1)->A:W-1(V403_D-1))
Found potential edge: Edge(380->404,w:4.0) between GGCCACACGA...GCTACAAACA:W1(V380_D-1) and G:W-1(V404_D-1)
removing vertex G:W-1(V404_D-1) was concatenated into GGCCACACGA...CTACAAACAG:W1(V380_D-1)
Want to move edge Edge(404->405,w:4.0)(G:W-1(V404_D-1)->A:W-1(V405_D-1)) to (GGCCACACGA...CTACAAACAG:W1(V380_D-1)->A:W-1(V405_D-1)
	adding edge: GGCCACACGA...CTACAAACAG:W1(V380_D-1) to A:W-1(V405_D-1)
removing edge Edge(404->405,w:4.0)(G:W-1(V404_D-1)->A:W-1(V405_D-1))
removing edge Edge(380->404,w:4.0)(GGCCACACGA...CTACAAACAG:W1(V380_D-1)->G:W-1(V404_D-1))
Found potential edge: Edge(380->405,w:4.0) between GGCCACACGA...CTACAAACAG:W1(V380_D-1) and A:W-1(V405_D-1)
removing vertex A:W-1(V405_D-1) was concatenated into GGCCACACGA...TACAAACAGA:W1(V380_D-1)
Want to move edge Edge(405->406,w:4.0)(A:W-1(V405_D-1)->C:W-1(V406_D-1)) to (GGCCACACGA...TACAAACAGA:W1(V380_D-1)->C:W-1(V406_D-1)
	adding edge: GGCCACACGA...TACAAACAGA:W1(V380_D-1) to C:W-1(V406_D-1)
removing edge Edge(405->406,w:4.0)(A:W-1(V405_D-1)->C:W-1(V406_D-1))
removing edge Edge(380->405,w:4.0)(GGCCACACGA...TACAAACAGA:W1(V380_D-1)->A:W-1(V405_D-1))
Found potential edge: Edge(380->406,w:4.0) between GGCCACACGA...TACAAACAGA:W1(V380_D-1) and C:W-1(V406_D-1)
removing vertex C:W-1(V406_D-1) was concatenated into GGCCACACGA...ACAAACAGAC:W1(V380_D-1)
Want to move edge Edge(406->407,w:4.0)(C:W-1(V406_D-1)->T:W-1(V407_D-1)) to (GGCCACACGA...ACAAACAGAC:W1(V380_D-1)->T:W-1(V407_D-1)
	adding edge: GGCCACACGA...ACAAACAGAC:W1(V380_D-1) to T:W-1(V407_D-1)
removing edge Edge(406->407,w:4.0)(C:W-1(V406_D-1)->T:W-1(V407_D-1))
removing edge Edge(380->406,w:4.0)(GGCCACACGA...ACAAACAGAC:W1(V380_D-1)->C:W-1(V406_D-1))
Found potential edge: Edge(380->407,w:4.0) between GGCCACACGA...ACAAACAGAC:W1(V380_D-1) and T:W-1(V407_D-1)
removing vertex T:W-1(V407_D-1) was concatenated into GGCCACACGA...CAAACAGACT:W1(V380_D-1)
Want to move edge Edge(407->408,w:4.0)(T:W-1(V407_D-1)->T:W-1(V408_D-1)) to (GGCCACACGA...CAAACAGACT:W1(V380_D-1)->T:W-1(V408_D-1)
	adding edge: GGCCACACGA...CAAACAGACT:W1(V380_D-1) to T:W-1(V408_D-1)
removing edge Edge(407->408,w:4.0)(T:W-1(V407_D-1)->T:W-1(V408_D-1))
removing edge Edge(380->407,w:4.0)(GGCCACACGA...CAAACAGACT:W1(V380_D-1)->T:W-1(V407_D-1))
Found potential edge: Edge(380->408,w:4.0) between GGCCACACGA...CAAACAGACT:W1(V380_D-1) and T:W-1(V408_D-1)
removing vertex T:W-1(V408_D-1) was concatenated into GGCCACACGA...AAACAGACTT:W1(V380_D-1)
Want to move edge Edge(408->409,w:4.0)(T:W-1(V408_D-1)->C:W-1(V409_D-1)) to (GGCCACACGA...AAACAGACTT:W1(V380_D-1)->C:W-1(V409_D-1)
	adding edge: GGCCACACGA...AAACAGACTT:W1(V380_D-1) to C:W-1(V409_D-1)
removing edge Edge(408->409,w:4.0)(T:W-1(V408_D-1)->C:W-1(V409_D-1))
removing edge Edge(380->408,w:4.0)(GGCCACACGA...AAACAGACTT:W1(V380_D-1)->T:W-1(V408_D-1))
Found potential edge: Edge(380->409,w:4.0) between GGCCACACGA...AAACAGACTT:W1(V380_D-1) and C:W-1(V409_D-1)
removing vertex C:W-1(V409_D-1) was concatenated into GGCCACACGA...AACAGACTTC:W1(V380_D-1)
Want to move edge Edge(409->410,w:4.0)(C:W-1(V409_D-1)->C:W-1(V410_D-1)) to (GGCCACACGA...AACAGACTTC:W1(V380_D-1)->C:W-1(V410_D-1)
	adding edge: GGCCACACGA...AACAGACTTC:W1(V380_D-1) to C:W-1(V410_D-1)
removing edge Edge(409->410,w:4.0)(C:W-1(V409_D-1)->C:W-1(V410_D-1))
removing edge Edge(380->409,w:4.0)(GGCCACACGA...AACAGACTTC:W1(V380_D-1)->C:W-1(V409_D-1))
Found potential edge: Edge(380->410,w:4.0) between GGCCACACGA...AACAGACTTC:W1(V380_D-1) and C:W-1(V410_D-1)
removing vertex C:W-1(V410_D-1) was concatenated into GGCCACACGA...ACAGACTTCC:W1(V380_D-1)
Want to move edge Edge(410->411,w:4.0)(C:W-1(V410_D-1)->T:W-1(V411_D-1)) to (GGCCACACGA...ACAGACTTCC:W1(V380_D-1)->T:W-1(V411_D-1)
	adding edge: GGCCACACGA...ACAGACTTCC:W1(V380_D-1) to T:W-1(V411_D-1)
removing edge Edge(410->411,w:4.0)(C:W-1(V410_D-1)->T:W-1(V411_D-1))
removing edge Edge(380->410,w:4.0)(GGCCACACGA...ACAGACTTCC:W1(V380_D-1)->C:W-1(V410_D-1))
Found potential edge: Edge(380->411,w:4.0) between GGCCACACGA...ACAGACTTCC:W1(V380_D-1) and T:W-1(V411_D-1)
removing vertex T:W-1(V411_D-1) was concatenated into GGCCACACGA...CAGACTTCCT:W1(V380_D-1)
Want to move edge Edge(411->412,w:6.0)(T:W-1(V411_D-1)->C:W-1(V412_D-1)) to (GGCCACACGA...CAGACTTCCT:W1(V380_D-1)->C:W-1(V412_D-1)
	adding edge: GGCCACACGA...CAGACTTCCT:W1(V380_D-1) to C:W-1(V412_D-1)
removing edge Edge(411->412,w:6.0)(T:W-1(V411_D-1)->C:W-1(V412_D-1))
removing edge Edge(380->411,w:4.0)(GGCCACACGA...CAGACTTCCT:W1(V380_D-1)->T:W-1(V411_D-1))
Found potential edge: Edge(380->412,w:6.0) between GGCCACACGA...CAGACTTCCT:W1(V380_D-1) and C:W-1(V412_D-1)
removing vertex C:W-1(V412_D-1) was concatenated into GGCCACACGA...AGACTTCCTC:W2(V380_D-1)
Want to move edge Edge(412->413,w:6.0)(C:W-1(V412_D-1)->A:W-1(V413_D-1)) to (GGCCACACGA...AGACTTCCTC:W2(V380_D-1)->A:W-1(V413_D-1)
	adding edge: GGCCACACGA...AGACTTCCTC:W2(V380_D-1) to A:W-1(V413_D-1)
removing edge Edge(412->413,w:6.0)(C:W-1(V412_D-1)->A:W-1(V413_D-1))
removing edge Edge(380->412,w:6.0)(GGCCACACGA...AGACTTCCTC:W2(V380_D-1)->C:W-1(V412_D-1))
Found potential edge: Edge(380->413,w:6.0) between GGCCACACGA...AGACTTCCTC:W2(V380_D-1) and A:W-1(V413_D-1)
removing vertex A:W-1(V413_D-1) was concatenated into GGCCACACGA...GACTTCCTCA:W2(V380_D-1)
Want to move edge Edge(413->414,w:8.0)(A:W-1(V413_D-1)->A:W-1(V414_D-1)) to (GGCCACACGA...GACTTCCTCA:W2(V380_D-1)->A:W-1(V414_D-1)
	adding edge: GGCCACACGA...GACTTCCTCA:W2(V380_D-1) to A:W-1(V414_D-1)
removing edge Edge(413->414,w:8.0)(A:W-1(V413_D-1)->A:W-1(V414_D-1))
removing edge Edge(380->413,w:6.0)(GGCCACACGA...GACTTCCTCA:W2(V380_D-1)->A:W-1(V413_D-1))
Found potential edge: Edge(380->414,w:8.0) between GGCCACACGA...GACTTCCTCA:W2(V380_D-1) and A:W-1(V414_D-1)
removing vertex A:W-1(V414_D-1) was concatenated into GGCCACACGA...ACTTCCTCAA:W2(V380_D-1)
Want to move edge Edge(414->415,w:8.0)(A:W-1(V414_D-1)->G:W-1(V415_D-1)) to (GGCCACACGA...ACTTCCTCAA:W2(V380_D-1)->G:W-1(V415_D-1)
	adding edge: GGCCACACGA...ACTTCCTCAA:W2(V380_D-1) to G:W-1(V415_D-1)
removing edge Edge(414->415,w:8.0)(A:W-1(V414_D-1)->G:W-1(V415_D-1))
removing edge Edge(380->414,w:8.0)(GGCCACACGA...ACTTCCTCAA:W2(V380_D-1)->A:W-1(V414_D-1))
Found potential edge: Edge(380->415,w:8.0) between GGCCACACGA...ACTTCCTCAA:W2(V380_D-1) and G:W-1(V415_D-1)
removing vertex G:W-1(V415_D-1) was concatenated into GGCCACACGA...CTTCCTCAAG:W2(V380_D-1)
Want to move edge Edge(415->416,w:6.0)(G:W-1(V415_D-1)->C:W-1(V416_D-1)) to (GGCCACACGA...CTTCCTCAAG:W2(V380_D-1)->C:W-1(V416_D-1)
	adding edge: GGCCACACGA...CTTCCTCAAG:W2(V380_D-1) to C:W-1(V416_D-1)
Want to move edge Edge(415->885,w:2.0)(G:W-1(V415_D-1)->G:W-1(V885_D-1)) to (GGCCACACGA...CTTCCTCAAG:W2(V380_D-1)->G:W-1(V885_D-1)
	adding edge: GGCCACACGA...CTTCCTCAAG:W2(V380_D-1) to G:W-1(V885_D-1)
removing edge Edge(415->416,w:6.0)(G:W-1(V415_D-1)->C:W-1(V416_D-1))
removing edge Edge(415->885,w:2.0)(G:W-1(V415_D-1)->G:W-1(V885_D-1))
removing edge Edge(380->415,w:8.0)(GGCCACACGA...CTTCCTCAAG:W2(V380_D-1)->G:W-1(V415_D-1))
Found potential edge: Edge(416->417,w:6.0) between C:W-1(V416_D-1) and C:W-1(V417_D-1)
removing vertex C:W-1(V417_D-1) was concatenated into CC:W6(V416_D-1)
Want to move edge Edge(417->418,w:6.0)(C:W-1(V417_D-1)->T:W-1(V418_D-1)) to (CC:W6(V416_D-1)->T:W-1(V418_D-1)
	adding edge: CC:W6(V416_D-1) to T:W-1(V418_D-1)
removing edge Edge(417->418,w:6.0)(C:W-1(V417_D-1)->T:W-1(V418_D-1))
removing edge Edge(416->417,w:6.0)(CC:W6(V416_D-1)->C:W-1(V417_D-1))
Found potential edge: Edge(416->418,w:6.0) between CC:W6(V416_D-1) and T:W-1(V418_D-1)
removing vertex T:W-1(V418_D-1) was concatenated into CCT:W6(V416_D-1)
Want to move edge Edge(418->419,w:6.0)(T:W-1(V418_D-1)->C:W-1(V419_D-1)) to (CCT:W6(V416_D-1)->C:W-1(V419_D-1)
	adding edge: CCT:W6(V416_D-1) to C:W-1(V419_D-1)
removing edge Edge(418->419,w:6.0)(T:W-1(V418_D-1)->C:W-1(V419_D-1))
removing edge Edge(416->418,w:6.0)(CCT:W6(V416_D-1)->T:W-1(V418_D-1))
Found potential edge: Edge(416->419,w:6.0) between CCT:W6(V416_D-1) and C:W-1(V419_D-1)
removing vertex C:W-1(V419_D-1) was concatenated into CCTC:W6(V416_D-1)
Want to move edge Edge(419->420,w:6.0)(C:W-1(V419_D-1)->A:W-1(V420_D-1)) to (CCTC:W6(V416_D-1)->A:W-1(V420_D-1)
	adding edge: CCTC:W6(V416_D-1) to A:W-1(V420_D-1)
removing edge Edge(419->420,w:6.0)(C:W-1(V419_D-1)->A:W-1(V420_D-1))
removing edge Edge(416->419,w:6.0)(CCTC:W6(V416_D-1)->C:W-1(V419_D-1))
Found potential edge: Edge(416->420,w:6.0) between CCTC:W6(V416_D-1) and A:W-1(V420_D-1)
removing vertex A:W-1(V420_D-1) was concatenated into CCTCA:W6(V416_D-1)
Want to move edge Edge(420->421,w:6.0)(A:W-1(V420_D-1)->T:W-1(V421_D-1)) to (CCTCA:W6(V416_D-1)->T:W-1(V421_D-1)
	adding edge: CCTCA:W6(V416_D-1) to T:W-1(V421_D-1)
removing edge Edge(420->421,w:6.0)(A:W-1(V420_D-1)->T:W-1(V421_D-1))
removing edge Edge(416->420,w:6.0)(CCTCA:W6(V416_D-1)->A:W-1(V420_D-1))
Found potential edge: Edge(416->421,w:6.0) between CCTCA:W6(V416_D-1) and T:W-1(V421_D-1)
removing vertex T:W-1(V421_D-1) was concatenated into CCTCAT:W6(V416_D-1)
Want to move edge Edge(421->422,w:6.0)(T:W-1(V421_D-1)->C:W-1(V422_D-1)) to (CCTCAT:W6(V416_D-1)->C:W-1(V422_D-1)
	adding edge: CCTCAT:W6(V416_D-1) to C:W-1(V422_D-1)
removing edge Edge(421->422,w:6.0)(T:W-1(V421_D-1)->C:W-1(V422_D-1))
removing edge Edge(416->421,w:6.0)(CCTCAT:W6(V416_D-1)->T:W-1(V421_D-1))
Found potential edge: Edge(416->422,w:6.0) between CCTCAT:W6(V416_D-1) and C:W-1(V422_D-1)
removing vertex C:W-1(V422_D-1) was concatenated into CCTCATC:W6(V416_D-1)
Want to move edge Edge(422->423,w:8.0)(C:W-1(V422_D-1)->A:W-1(V423_D-1)) to (CCTCATC:W6(V416_D-1)->A:W-1(V423_D-1)
	adding edge: CCTCATC:W6(V416_D-1) to A:W-1(V423_D-1)
removing edge Edge(422->423,w:8.0)(C:W-1(V422_D-1)->A:W-1(V423_D-1))
removing edge Edge(416->422,w:6.0)(CCTCATC:W6(V416_D-1)->C:W-1(V422_D-1))
Found potential edge: Edge(416->423,w:8.0) between CCTCATC:W6(V416_D-1) and A:W-1(V423_D-1)
removing vertex A:W-1(V423_D-1) was concatenated into CCTCATCA:W6(V416_D-1)
Want to move edge Edge(423->424,w:8.0)(A:W-1(V423_D-1)->G:W-1(V424_D-1)) to (CCTCATCA:W6(V416_D-1)->G:W-1(V424_D-1)
	adding edge: CCTCATCA:W6(V416_D-1) to G:W-1(V424_D-1)
removing edge Edge(423->424,w:8.0)(A:W-1(V423_D-1)->G:W-1(V424_D-1))
removing edge Edge(416->423,w:8.0)(CCTCATCA:W6(V416_D-1)->A:W-1(V423_D-1))
Found potential edge: Edge(416->424,w:8.0) between CCTCATCA:W6(V416_D-1) and G:W-1(V424_D-1)
removing vertex G:W-1(V424_D-1) was concatenated into CCTCATCAG:W7(V416_D-1)
Want to move edge Edge(424->425,w:8.0)(G:W-1(V424_D-1)->C:W-1(V425_D-1)) to (CCTCATCAG:W7(V416_D-1)->C:W-1(V425_D-1)
	adding edge: CCTCATCAG:W7(V416_D-1) to C:W-1(V425_D-1)
removing edge Edge(424->425,w:8.0)(G:W-1(V424_D-1)->C:W-1(V425_D-1))
removing edge Edge(416->424,w:8.0)(CCTCATCAG:W7(V416_D-1)->G:W-1(V424_D-1))
Found potential edge: Edge(416->425,w:8.0) between CCTCATCAG:W7(V416_D-1) and C:W-1(V425_D-1)
removing vertex C:W-1(V425_D-1) was concatenated into CCTCATCAGC:W7(V416_D-1)
Want to move edge Edge(425->426,w:8.0)(C:W-1(V425_D-1)->A:W-1(V426_D-1)) to (CCTCATCAGC:W7(V416_D-1)->A:W-1(V426_D-1)
	adding edge: CCTCATCAGC:W7(V416_D-1) to A:W-1(V426_D-1)
removing edge Edge(425->426,w:8.0)(C:W-1(V425_D-1)->A:W-1(V426_D-1))
removing edge Edge(416->425,w:8.0)(CCTCATCAGC:W7(V416_D-1)->C:W-1(V425_D-1))
Found potential edge: Edge(416->426,w:8.0) between CCTCATCAGC:W7(V416_D-1) and A:W-1(V426_D-1)
removing vertex A:W-1(V426_D-1) was concatenated into CCTCATCAGCA:W7(V416_D-1)
Want to move edge Edge(426->427,w:8.0)(A:W-1(V426_D-1)->A:W-1(V427_D-1)) to (CCTCATCAGCA:W7(V416_D-1)->A:W-1(V427_D-1)
	adding edge: CCTCATCAGCA:W7(V416_D-1) to A:W-1(V427_D-1)
removing edge Edge(426->427,w:8.0)(A:W-1(V426_D-1)->A:W-1(V427_D-1))
removing edge Edge(416->426,w:8.0)(CCTCATCAGCA:W7(V416_D-1)->A:W-1(V426_D-1))
Found potential edge: Edge(416->427,w:8.0) between CCTCATCAGCA:W7(V416_D-1) and A:W-1(V427_D-1)
removing vertex A:W-1(V427_D-1) was concatenated into CCTCATCAGCAA:W7(V416_D-1)
Want to move edge Edge(427->428,w:8.0)(A:W-1(V427_D-1)->G:W-1(V428_D-1)) to (CCTCATCAGCAA:W7(V416_D-1)->G:W-1(V428_D-1)
	adding edge: CCTCATCAGCAA:W7(V416_D-1) to G:W-1(V428_D-1)
removing edge Edge(427->428,w:8.0)(A:W-1(V427_D-1)->G:W-1(V428_D-1))
removing edge Edge(416->427,w:8.0)(CCTCATCAGCAA:W7(V416_D-1)->A:W-1(V427_D-1))
Found potential edge: Edge(416->428,w:8.0) between CCTCATCAGCAA:W7(V416_D-1) and G:W-1(V428_D-1)
removing vertex G:W-1(V428_D-1) was concatenated into CCTCATCAGCAAG:W7(V416_D-1)
Want to move edge Edge(428->429,w:8.0)(G:W-1(V428_D-1)->A:W-1(V429_D-1)) to (CCTCATCAGCAAG:W7(V416_D-1)->A:W-1(V429_D-1)
	adding edge: CCTCATCAGCAAG:W7(V416_D-1) to A:W-1(V429_D-1)
removing edge Edge(428->429,w:8.0)(G:W-1(V428_D-1)->A:W-1(V429_D-1))
removing edge Edge(416->428,w:8.0)(CCTCATCAGCAAG:W7(V416_D-1)->G:W-1(V428_D-1))
Found potential edge: Edge(416->429,w:8.0) between CCTCATCAGCAAG:W7(V416_D-1) and A:W-1(V429_D-1)
removing vertex A:W-1(V429_D-1) was concatenated into CCTCATCAGCAAGA:W7(V416_D-1)
Want to move edge Edge(429->430,w:8.0)(A:W-1(V429_D-1)->A:W-1(V430_D-1)) to (CCTCATCAGCAAGA:W7(V416_D-1)->A:W-1(V430_D-1)
	adding edge: CCTCATCAGCAAGA:W7(V416_D-1) to A:W-1(V430_D-1)
removing edge Edge(429->430,w:8.0)(A:W-1(V429_D-1)->A:W-1(V430_D-1))
removing edge Edge(416->429,w:8.0)(CCTCATCAGCAAGA:W7(V416_D-1)->A:W-1(V429_D-1))
Found potential edge: Edge(416->430,w:8.0) between CCTCATCAGCAAGA:W7(V416_D-1) and A:W-1(V430_D-1)
removing vertex A:W-1(V430_D-1) was concatenated into CCTCATCAGCAAGAA:W7(V416_D-1)
Want to move edge Edge(430->431,w:8.0)(A:W-1(V430_D-1)->G:W-1(V431_D-1)) to (CCTCATCAGCAAGAA:W7(V416_D-1)->G:W-1(V431_D-1)
	adding edge: CCTCATCAGCAAGAA:W7(V416_D-1) to G:W-1(V431_D-1)
removing edge Edge(430->431,w:8.0)(A:W-1(V430_D-1)->G:W-1(V431_D-1))
removing edge Edge(416->430,w:8.0)(CCTCATCAGCAAGAA:W7(V416_D-1)->A:W-1(V430_D-1))
Found potential edge: Edge(416->431,w:8.0) between CCTCATCAGCAAGAA:W7(V416_D-1) and G:W-1(V431_D-1)
removing vertex G:W-1(V431_D-1) was concatenated into CCTCATCAGCAAGAAG:W7(V416_D-1)
Want to move edge Edge(431->432,w:8.0)(G:W-1(V431_D-1)->A:W-1(V432_D-1)) to (CCTCATCAGCAAGAAG:W7(V416_D-1)->A:W-1(V432_D-1)
	adding edge: CCTCATCAGCAAGAAG:W7(V416_D-1) to A:W-1(V432_D-1)
removing edge Edge(431->432,w:8.0)(G:W-1(V431_D-1)->A:W-1(V432_D-1))
removing edge Edge(416->431,w:8.0)(CCTCATCAGCAAGAAG:W7(V416_D-1)->G:W-1(V431_D-1))
Found potential edge: Edge(416->432,w:8.0) between CCTCATCAGCAAGAAG:W7(V416_D-1) and A:W-1(V432_D-1)
removing vertex A:W-1(V432_D-1) was concatenated into CCTCATCAGCAAGAAGA:W7(V416_D-1)
Want to move edge Edge(432->433,w:6.0)(A:W-1(V432_D-1)->A:W-1(V433_D-1)) to (CCTCATCAGCAAGAAGA:W7(V416_D-1)->A:W-1(V433_D-1)
	adding edge: CCTCATCAGCAAGAAGA:W7(V416_D-1) to A:W-1(V433_D-1)
removing edge Edge(432->433,w:6.0)(A:W-1(V432_D-1)->A:W-1(V433_D-1))
removing edge Edge(416->432,w:8.0)(CCTCATCAGCAAGAAGA:W7(V416_D-1)->A:W-1(V432_D-1))
Found potential edge: Edge(416->433,w:6.0) between CCTCATCAGCAAGAAGA:W7(V416_D-1) and A:W-1(V433_D-1)
removing vertex A:W-1(V433_D-1) was concatenated into CCTCATCAGCAAGAAGAA:W7(V416_D-1)
Want to move edge Edge(433->434,w:6.0)(A:W-1(V433_D-1)->A:W-1(V434_D-1)) to (CCTCATCAGCAAGAAGAA:W7(V416_D-1)->A:W-1(V434_D-1)
	adding edge: CCTCATCAGCAAGAAGAA:W7(V416_D-1) to A:W-1(V434_D-1)
removing edge Edge(433->434,w:6.0)(A:W-1(V433_D-1)->A:W-1(V434_D-1))
removing edge Edge(416->433,w:6.0)(CCTCATCAGCAAGAAGAA:W7(V416_D-1)->A:W-1(V433_D-1))
Found potential edge: Edge(416->434,w:6.0) between CCTCATCAGCAAGAAGAA:W7(V416_D-1) and A:W-1(V434_D-1)
removing vertex A:W-1(V434_D-1) was concatenated into CCTCATCAGCAAGAAGAAA:W7(V416_D-1)
Want to move edge Edge(434->435,w:6.0)(A:W-1(V434_D-1)->T:W-1(V435_D-1)) to (CCTCATCAGCAAGAAGAAA:W7(V416_D-1)->T:W-1(V435_D-1)
	adding edge: CCTCATCAGCAAGAAGAAA:W7(V416_D-1) to T:W-1(V435_D-1)
removing edge Edge(434->435,w:6.0)(A:W-1(V434_D-1)->T:W-1(V435_D-1))
removing edge Edge(416->434,w:6.0)(CCTCATCAGCAAGAAGAAA:W7(V416_D-1)->A:W-1(V434_D-1))
Found potential edge: Edge(416->435,w:6.0) between CCTCATCAGCAAGAAGAAA:W7(V416_D-1) and T:W-1(V435_D-1)
removing vertex T:W-1(V435_D-1) was concatenated into CCTCATCAGCAAGAAGAAAT:W7(V416_D-1)
Want to move edge Edge(435->436,w:6.0)(T:W-1(V435_D-1)->C:W-1(V436_D-1)) to (CCTCATCAGCAAGAAGAAAT:W7(V416_D-1)->C:W-1(V436_D-1)
	adding edge: CCTCATCAGCAAGAAGAAAT:W7(V416_D-1) to C:W-1(V436_D-1)
removing edge Edge(435->436,w:6.0)(T:W-1(V435_D-1)->C:W-1(V436_D-1))
removing edge Edge(416->435,w:6.0)(CCTCATCAGCAAGAAGAAAT:W7(V416_D-1)->T:W-1(V435_D-1))
Found potential edge: Edge(416->436,w:6.0) between CCTCATCAGCAAGAAGAAAT:W7(V416_D-1) and C:W-1(V436_D-1)
removing vertex C:W-1(V436_D-1) was concatenated into CCTCATCAGCAAGAAGAAATC:W7(V416_D-1)
Want to move edge Edge(436->437,w:6.0)(C:W-1(V436_D-1)->T:W-1(V437_D-1)) to (CCTCATCAGCAAGAAGAAATC:W7(V416_D-1)->T:W-1(V437_D-1)
	adding edge: CCTCATCAGCAAGAAGAAATC:W7(V416_D-1) to T:W-1(V437_D-1)
removing edge Edge(436->437,w:6.0)(C:W-1(V436_D-1)->T:W-1(V437_D-1))
removing edge Edge(416->436,w:6.0)(CCTCATCAGCAAGAAGAAATC:W7(V416_D-1)->C:W-1(V436_D-1))
Found potential edge: Edge(416->437,w:6.0) between CCTCATCAGCAAGAAGAAATC:W7(V416_D-1) and T:W-1(V437_D-1)
removing vertex T:W-1(V437_D-1) was concatenated into CCTCATCAGCAAGAAGAAATCT:W7(V416_D-1)
Want to move edge Edge(437->438,w:6.0)(T:W-1(V437_D-1)->T:W-1(V438_D-1)) to (CCTCATCAGCAAGAAGAAATCT:W7(V416_D-1)->T:W-1(V438_D-1)
	adding edge: CCTCATCAGCAAGAAGAAATCT:W7(V416_D-1) to T:W-1(V438_D-1)
removing edge Edge(437->438,w:6.0)(T:W-1(V437_D-1)->T:W-1(V438_D-1))
removing edge Edge(416->437,w:6.0)(CCTCATCAGCAAGAAGAAATCT:W7(V416_D-1)->T:W-1(V437_D-1))
Found potential edge: Edge(416->438,w:6.0) between CCTCATCAGCAAGAAGAAATCT:W7(V416_D-1) and T:W-1(V438_D-1)
removing vertex T:W-1(V438_D-1) was concatenated into CCTCATCAGCAAGAAGAAATCTT:W7(V416_D-1)
Want to move edge Edge(438->439,w:6.0)(T:W-1(V438_D-1)->T:W-1(V439_D-1)) to (CCTCATCAGCAAGAAGAAATCTT:W7(V416_D-1)->T:W-1(V439_D-1)
	adding edge: CCTCATCAGCAAGAAGAAATCTT:W7(V416_D-1) to T:W-1(V439_D-1)
removing edge Edge(438->439,w:6.0)(T:W-1(V438_D-1)->T:W-1(V439_D-1))
removing edge Edge(416->438,w:6.0)(CCTCATCAGCAAGAAGAAATCTT:W7(V416_D-1)->T:W-1(V438_D-1))
Found potential edge: Edge(416->439,w:6.0) between CCTCATCAGCAAGAAGAAATCTT:W7(V416_D-1) and T:W-1(V439_D-1)
removing vertex T:W-1(V439_D-1) was concatenated into CCTCATCAGCAAGAAGAAATCTTT:W7(V416_D-1)
Want to move edge Edge(439->440,w:6.0)(T:W-1(V439_D-1)->C:W-1(V440_D-1)) to (CCTCATCAGCAAGAAGAAATCTTT:W7(V416_D-1)->C:W-1(V440_D-1)
	adding edge: CCTCATCAGCAAGAAGAAATCTTT:W7(V416_D-1) to C:W-1(V440_D-1)
removing edge Edge(439->440,w:6.0)(T:W-1(V439_D-1)->C:W-1(V440_D-1))
removing edge Edge(416->439,w:6.0)(CCTCATCAGCAAGAAGAAATCTTT:W7(V416_D-1)->T:W-1(V439_D-1))
Found potential edge: Edge(440->441,w:8.0) between C:W-1(V440_D-1) and T:W-1(V441_D-1)
removing vertex T:W-1(V441_D-1) was concatenated into CT:W8(V440_D-1)
Want to move edge Edge(441->442,w:8.0)(T:W-1(V441_D-1)->T:W-1(V442_D-1)) to (CT:W8(V440_D-1)->T:W-1(V442_D-1)
	adding edge: CT:W8(V440_D-1) to T:W-1(V442_D-1)
removing edge Edge(441->442,w:8.0)(T:W-1(V441_D-1)->T:W-1(V442_D-1))
removing edge Edge(440->441,w:8.0)(CT:W8(V440_D-1)->T:W-1(V441_D-1))
Found potential edge: Edge(440->442,w:8.0) between CT:W8(V440_D-1) and T:W-1(V442_D-1)
removing vertex T:W-1(V442_D-1) was concatenated into CTT:W8(V440_D-1)
Want to move edge Edge(442->443,w:8.0)(T:W-1(V442_D-1)->T:W-1(V443_D-1)) to (CTT:W8(V440_D-1)->T:W-1(V443_D-1)
	adding edge: CTT:W8(V440_D-1) to T:W-1(V443_D-1)
removing edge Edge(442->443,w:8.0)(T:W-1(V442_D-1)->T:W-1(V443_D-1))
removing edge Edge(440->442,w:8.0)(CTT:W8(V440_D-1)->T:W-1(V442_D-1))
Found potential edge: Edge(440->443,w:8.0) between CTT:W8(V440_D-1) and T:W-1(V443_D-1)
removing vertex T:W-1(V443_D-1) was concatenated into CTTT:W8(V440_D-1)
Want to move edge Edge(443->444,w:8.0)(T:W-1(V443_D-1)->C:W-1(V444_D-1)) to (CTTT:W8(V440_D-1)->C:W-1(V444_D-1)
	adding edge: CTTT:W8(V440_D-1) to C:W-1(V444_D-1)
removing edge Edge(443->444,w:8.0)(T:W-1(V443_D-1)->C:W-1(V444_D-1))
removing edge Edge(440->443,w:8.0)(CTTT:W8(V440_D-1)->T:W-1(V443_D-1))
Found potential edge: Edge(440->444,w:8.0) between CTTT:W8(V440_D-1) and C:W-1(V444_D-1)
removing vertex C:W-1(V444_D-1) was concatenated into CTTTC:W8(V440_D-1)
Want to move edge Edge(444->445,w:8.0)(C:W-1(V444_D-1)->C:W-1(V445_D-1)) to (CTTTC:W8(V440_D-1)->C:W-1(V445_D-1)
	adding edge: CTTTC:W8(V440_D-1) to C:W-1(V445_D-1)
removing edge Edge(444->445,w:8.0)(C:W-1(V444_D-1)->C:W-1(V445_D-1))
removing edge Edge(440->444,w:8.0)(CTTTC:W8(V440_D-1)->C:W-1(V444_D-1))
Found potential edge: Edge(440->445,w:8.0) between CTTTC:W8(V440_D-1) and C:W-1(V445_D-1)
removing vertex C:W-1(V445_D-1) was concatenated into CTTTCC:W8(V440_D-1)
Want to move edge Edge(445->446,w:8.0)(C:W-1(V445_D-1)->A:W-1(V446_D-1)) to (CTTTCC:W8(V440_D-1)->A:W-1(V446_D-1)
	adding edge: CTTTCC:W8(V440_D-1) to A:W-1(V446_D-1)
removing edge Edge(445->446,w:8.0)(C:W-1(V445_D-1)->A:W-1(V446_D-1))
removing edge Edge(440->445,w:8.0)(CTTTCC:W8(V440_D-1)->C:W-1(V445_D-1))
Found potential edge: Edge(440->446,w:8.0) between CTTTCC:W8(V440_D-1) and A:W-1(V446_D-1)
removing vertex A:W-1(V446_D-1) was concatenated into CTTTCCA:W8(V440_D-1)
Want to move edge Edge(446->447,w:8.0)(A:W-1(V446_D-1)->A:W-1(V447_D-1)) to (CTTTCCA:W8(V440_D-1)->A:W-1(V447_D-1)
	adding edge: CTTTCCA:W8(V440_D-1) to A:W-1(V447_D-1)
removing edge Edge(446->447,w:8.0)(A:W-1(V446_D-1)->A:W-1(V447_D-1))
removing edge Edge(440->446,w:8.0)(CTTTCCA:W8(V440_D-1)->A:W-1(V446_D-1))
Found potential edge: Edge(440->447,w:8.0) between CTTTCCA:W8(V440_D-1) and A:W-1(V447_D-1)
removing vertex A:W-1(V447_D-1) was concatenated into CTTTCCAA:W8(V440_D-1)
Want to move edge Edge(447->448,w:8.0)(A:W-1(V447_D-1)->G:W-1(V448_D-1)) to (CTTTCCAA:W8(V440_D-1)->G:W-1(V448_D-1)
	adding edge: CTTTCCAA:W8(V440_D-1) to G:W-1(V448_D-1)
removing edge Edge(447->448,w:8.0)(A:W-1(V447_D-1)->G:W-1(V448_D-1))
removing edge Edge(440->447,w:8.0)(CTTTCCAA:W8(V440_D-1)->A:W-1(V447_D-1))
Found potential edge: Edge(440->448,w:8.0) between CTTTCCAA:W8(V440_D-1) and G:W-1(V448_D-1)
removing vertex G:W-1(V448_D-1) was concatenated into CTTTCCAAG:W8(V440_D-1)
Want to move edge Edge(448->449,w:8.0)(G:W-1(V448_D-1)->T:W-1(V449_D-1)) to (CTTTCCAAG:W8(V440_D-1)->T:W-1(V449_D-1)
	adding edge: CTTTCCAAG:W8(V440_D-1) to T:W-1(V449_D-1)
removing edge Edge(448->449,w:8.0)(G:W-1(V448_D-1)->T:W-1(V449_D-1))
removing edge Edge(440->448,w:8.0)(CTTTCCAAG:W8(V440_D-1)->G:W-1(V448_D-1))
Found potential edge: Edge(440->449,w:8.0) between CTTTCCAAG:W8(V440_D-1) and T:W-1(V449_D-1)
removing vertex T:W-1(V449_D-1) was concatenated into CTTTCCAAGT:W8(V440_D-1)
Want to move edge Edge(449->450,w:8.0)(T:W-1(V449_D-1)->A:W-1(V450_D-1)) to (CTTTCCAAGT:W8(V440_D-1)->A:W-1(V450_D-1)
	adding edge: CTTTCCAAGT:W8(V440_D-1) to A:W-1(V450_D-1)
removing edge Edge(449->450,w:8.0)(T:W-1(V449_D-1)->A:W-1(V450_D-1))
removing edge Edge(440->449,w:8.0)(CTTTCCAAGT:W8(V440_D-1)->T:W-1(V449_D-1))
Found potential edge: Edge(440->450,w:8.0) between CTTTCCAAGT:W8(V440_D-1) and A:W-1(V450_D-1)
removing vertex A:W-1(V450_D-1) was concatenated into CTTTCCAAGTA:W8(V440_D-1)
Want to move edge Edge(450->451,w:8.0)(A:W-1(V450_D-1)->G:W-1(V451_D-1)) to (CTTTCCAAGTA:W8(V440_D-1)->G:W-1(V451_D-1)
	adding edge: CTTTCCAAGTA:W8(V440_D-1) to G:W-1(V451_D-1)
removing edge Edge(450->451,w:8.0)(A:W-1(V450_D-1)->G:W-1(V451_D-1))
removing edge Edge(440->450,w:8.0)(CTTTCCAAGTA:W8(V440_D-1)->A:W-1(V450_D-1))
Found potential edge: Edge(451->452,w:10.0) between G:W-1(V451_D-1) and T:W-1(V452_D-1)
removing vertex T:W-1(V452_D-1) was concatenated into GT:W10(V451_D-1)
Want to move edge Edge(452->453,w:10.0)(T:W-1(V452_D-1)->G:W-1(V453_D-1)) to (GT:W10(V451_D-1)->G:W-1(V453_D-1)
	adding edge: GT:W10(V451_D-1) to G:W-1(V453_D-1)
removing edge Edge(452->453,w:10.0)(T:W-1(V452_D-1)->G:W-1(V453_D-1))
removing edge Edge(451->452,w:10.0)(GT:W10(V451_D-1)->T:W-1(V452_D-1))
Found potential edge: Edge(451->453,w:10.0) between GT:W10(V451_D-1) and G:W-1(V453_D-1)
removing vertex G:W-1(V453_D-1) was concatenated into GTG:W10(V451_D-1)
Want to move edge Edge(453->454,w:8.0)(G:W-1(V453_D-1)->T:W-1(V454_D-1)) to (GTG:W10(V451_D-1)->T:W-1(V454_D-1)
	adding edge: GTG:W10(V451_D-1) to T:W-1(V454_D-1)
removing edge Edge(453->454,w:8.0)(G:W-1(V453_D-1)->T:W-1(V454_D-1))
removing edge Edge(451->453,w:10.0)(GTG:W10(V451_D-1)->G:W-1(V453_D-1))
Found potential edge: Edge(451->454,w:8.0) between GTG:W10(V451_D-1) and T:W-1(V454_D-1)
removing vertex T:W-1(V454_D-1) was concatenated into GTGT:W9(V451_D-1)
Want to move edge Edge(454->455,w:8.0)(T:W-1(V454_D-1)->C:W-1(V455_D-1)) to (GTGT:W9(V451_D-1)->C:W-1(V455_D-1)
	adding edge: GTGT:W9(V451_D-1) to C:W-1(V455_D-1)
removing edge Edge(454->455,w:8.0)(T:W-1(V454_D-1)->C:W-1(V455_D-1))
removing edge Edge(451->454,w:8.0)(GTGT:W9(V451_D-1)->T:W-1(V454_D-1))
Found potential edge: Edge(451->455,w:8.0) between GTGT:W9(V451_D-1) and C:W-1(V455_D-1)
removing vertex C:W-1(V455_D-1) was concatenated into GTGTC:W9(V451_D-1)
Want to move edge Edge(455->456,w:8.0)(C:W-1(V455_D-1)->T:W-1(V456_D-1)) to (GTGTC:W9(V451_D-1)->T:W-1(V456_D-1)
	adding edge: GTGTC:W9(V451_D-1) to T:W-1(V456_D-1)
removing edge Edge(455->456,w:8.0)(C:W-1(V455_D-1)->T:W-1(V456_D-1))
removing edge Edge(451->455,w:8.0)(GTGTC:W9(V451_D-1)->C:W-1(V455_D-1))
Found potential edge: Edge(451->456,w:8.0) between GTGTC:W9(V451_D-1) and T:W-1(V456_D-1)
removing vertex T:W-1(V456_D-1) was concatenated into GTGTCT:W9(V451_D-1)
Want to move edge Edge(456->457,w:8.0)(T:W-1(V456_D-1)->T:W-1(V457_D-1)) to (GTGTCT:W9(V451_D-1)->T:W-1(V457_D-1)
	adding edge: GTGTCT:W9(V451_D-1) to T:W-1(V457_D-1)
removing edge Edge(456->457,w:8.0)(T:W-1(V456_D-1)->T:W-1(V457_D-1))
removing edge Edge(451->456,w:8.0)(GTGTCT:W9(V451_D-1)->T:W-1(V456_D-1))
Found potential edge: Edge(451->457,w:8.0) between GTGTCT:W9(V451_D-1) and T:W-1(V457_D-1)
removing vertex T:W-1(V457_D-1) was concatenated into GTGTCTT:W9(V451_D-1)
Want to move edge Edge(457->458,w:8.0)(T:W-1(V457_D-1)->A:W-1(V458_D-1)) to (GTGTCTT:W9(V451_D-1)->A:W-1(V458_D-1)
	adding edge: GTGTCTT:W9(V451_D-1) to A:W-1(V458_D-1)
removing edge Edge(457->458,w:8.0)(T:W-1(V457_D-1)->A:W-1(V458_D-1))
removing edge Edge(451->457,w:8.0)(GTGTCTT:W9(V451_D-1)->T:W-1(V457_D-1))
Found potential edge: Edge(451->458,w:8.0) between GTGTCTT:W9(V451_D-1) and A:W-1(V458_D-1)
removing vertex A:W-1(V458_D-1) was concatenated into GTGTCTTA:W9(V451_D-1)
Want to move edge Edge(458->459,w:8.0)(A:W-1(V458_D-1)->A:W-1(V459_D-1)) to (GTGTCTTA:W9(V451_D-1)->A:W-1(V459_D-1)
	adding edge: GTGTCTTA:W9(V451_D-1) to A:W-1(V459_D-1)
removing edge Edge(458->459,w:8.0)(A:W-1(V458_D-1)->A:W-1(V459_D-1))
removing edge Edge(451->458,w:8.0)(GTGTCTTA:W9(V451_D-1)->A:W-1(V458_D-1))
Found potential edge: Edge(451->459,w:8.0) between GTGTCTTA:W9(V451_D-1) and A:W-1(V459_D-1)
removing vertex A:W-1(V459_D-1) was concatenated into GTGTCTTAA:W9(V451_D-1)
Want to move edge Edge(459->460,w:8.0)(A:W-1(V459_D-1)->C:W-1(V460_D-1)) to (GTGTCTTAA:W9(V451_D-1)->C:W-1(V460_D-1)
	adding edge: GTGTCTTAA:W9(V451_D-1) to C:W-1(V460_D-1)
removing edge Edge(459->460,w:8.0)(A:W-1(V459_D-1)->C:W-1(V460_D-1))
removing edge Edge(451->459,w:8.0)(GTGTCTTAA:W9(V451_D-1)->A:W-1(V459_D-1))
Found potential edge: Edge(451->460,w:8.0) between GTGTCTTAA:W9(V451_D-1) and C:W-1(V460_D-1)
removing vertex C:W-1(V460_D-1) was concatenated into GTGTCTTAAC:W8(V451_D-1)
Want to move edge Edge(460->461,w:8.0)(C:W-1(V460_D-1)->T:W-1(V461_D-1)) to (GTGTCTTAAC:W8(V451_D-1)->T:W-1(V461_D-1)
	adding edge: GTGTCTTAAC:W8(V451_D-1) to T:W-1(V461_D-1)
removing edge Edge(460->461,w:8.0)(C:W-1(V460_D-1)->T:W-1(V461_D-1))
removing edge Edge(451->460,w:8.0)(GTGTCTTAAC:W8(V451_D-1)->C:W-1(V460_D-1))
Found potential edge: Edge(451->461,w:8.0) between GTGTCTTAAC:W8(V451_D-1) and T:W-1(V461_D-1)
removing vertex T:W-1(V461_D-1) was concatenated into GTGTCTTAACT:W8(V451_D-1)
Want to move edge Edge(461->462,w:8.0)(T:W-1(V461_D-1)->C:W-1(V462_D-1)) to (GTGTCTTAACT:W8(V451_D-1)->C:W-1(V462_D-1)
	adding edge: GTGTCTTAACT:W8(V451_D-1) to C:W-1(V462_D-1)
removing edge Edge(461->462,w:8.0)(T:W-1(V461_D-1)->C:W-1(V462_D-1))
removing edge Edge(451->461,w:8.0)(GTGTCTTAACT:W8(V451_D-1)->T:W-1(V461_D-1))
Found potential edge: Edge(451->462,w:8.0) between GTGTCTTAACT:W8(V451_D-1) and C:W-1(V462_D-1)
removing vertex C:W-1(V462_D-1) was concatenated into GTGTCTTAACTC:W8(V451_D-1)
Want to move edge Edge(462->463,w:8.0)(C:W-1(V462_D-1)->A:W-1(V463_D-1)) to (GTGTCTTAACTC:W8(V451_D-1)->A:W-1(V463_D-1)
	adding edge: GTGTCTTAACTC:W8(V451_D-1) to A:W-1(V463_D-1)
removing edge Edge(462->463,w:8.0)(C:W-1(V462_D-1)->A:W-1(V463_D-1))
removing edge Edge(451->462,w:8.0)(GTGTCTTAACTC:W8(V451_D-1)->C:W-1(V462_D-1))
Found potential edge: Edge(451->463,w:8.0) between GTGTCTTAACTC:W8(V451_D-1) and A:W-1(V463_D-1)
removing vertex A:W-1(V463_D-1) was concatenated into GTGTCTTAACTCA:W8(V451_D-1)
Want to move edge Edge(463->464,w:6.0)(A:W-1(V463_D-1)->G:W-1(V464_D-1)) to (GTGTCTTAACTCA:W8(V451_D-1)->G:W-1(V464_D-1)
	adding edge: GTGTCTTAACTCA:W8(V451_D-1) to G:W-1(V464_D-1)
removing edge Edge(463->464,w:6.0)(A:W-1(V463_D-1)->G:W-1(V464_D-1))
removing edge Edge(451->463,w:8.0)(GTGTCTTAACTCA:W8(V451_D-1)->A:W-1(V463_D-1))
Found potential edge: Edge(451->464,w:6.0) between GTGTCTTAACTCA:W8(V451_D-1) and G:W-1(V464_D-1)
removing vertex G:W-1(V464_D-1) was concatenated into GTGTCTTAACTCAG:W8(V451_D-1)
Want to move edge Edge(464->465,w:6.0)(G:W-1(V464_D-1)->G:W-1(V465_D-1)) to (GTGTCTTAACTCAG:W8(V451_D-1)->G:W-1(V465_D-1)
	adding edge: GTGTCTTAACTCAG:W8(V451_D-1) to G:W-1(V465_D-1)
removing edge Edge(464->465,w:6.0)(G:W-1(V464_D-1)->G:W-1(V465_D-1))
removing edge Edge(451->464,w:6.0)(GTGTCTTAACTCAG:W8(V451_D-1)->G:W-1(V464_D-1))
Found potential edge: Edge(451->465,w:6.0) between GTGTCTTAACTCAG:W8(V451_D-1) and G:W-1(V465_D-1)
removing vertex G:W-1(V465_D-1) was concatenated into GTGTCTTAACTCAGG:W8(V451_D-1)
Want to move edge Edge(465->466,w:4.0)(G:W-1(V465_D-1)->A:W-1(V466_D-1)) to (GTGTCTTAACTCAGG:W8(V451_D-1)->A:W-1(V466_D-1)
	adding edge: GTGTCTTAACTCAGG:W8(V451_D-1) to A:W-1(V466_D-1)
removing edge Edge(465->466,w:4.0)(G:W-1(V465_D-1)->A:W-1(V466_D-1))
removing edge Edge(451->465,w:6.0)(GTGTCTTAACTCAGG:W8(V451_D-1)->G:W-1(V465_D-1))
Found potential edge: Edge(451->466,w:4.0) between GTGTCTTAACTCAGG:W8(V451_D-1) and A:W-1(V466_D-1)
removing vertex A:W-1(V466_D-1) was concatenated into GTGTCTTAACTCAGGA:W8(V451_D-1)
Want to move edge Edge(466->467,w:4.0)(A:W-1(V466_D-1)->G:W-1(V467_D-1)) to (GTGTCTTAACTCAGGA:W8(V451_D-1)->G:W-1(V467_D-1)
	adding edge: GTGTCTTAACTCAGGA:W8(V451_D-1) to G:W-1(V467_D-1)
removing edge Edge(466->467,w:4.0)(A:W-1(V466_D-1)->G:W-1(V467_D-1))
removing edge Edge(451->466,w:4.0)(GTGTCTTAACTCAGGA:W8(V451_D-1)->A:W-1(V466_D-1))
Found potential edge: Edge(451->467,w:4.0) between GTGTCTTAACTCAGGA:W8(V451_D-1) and G:W-1(V467_D-1)
removing vertex G:W-1(V467_D-1) was concatenated into GTGTCTTAACTCAGGAG:W8(V451_D-1)
Want to move edge Edge(467->468,w:2.0)(G:W-1(V467_D-1)->A:W-1(V468_D-1)) to (GTGTCTTAACTCAGGAG:W8(V451_D-1)->A:W-1(V468_D-1)
	adding edge: GTGTCTTAACTCAGGAG:W8(V451_D-1) to A:W-1(V468_D-1)
removing edge Edge(467->468,w:2.0)(G:W-1(V467_D-1)->A:W-1(V468_D-1))
removing edge Edge(451->467,w:4.0)(GTGTCTTAACTCAGGAG:W8(V451_D-1)->G:W-1(V467_D-1))
Found potential edge: Edge(451->468,w:2.0) between GTGTCTTAACTCAGGAG:W8(V451_D-1) and A:W-1(V468_D-1)
removing vertex A:W-1(V468_D-1) was concatenated into GTGTCTTAACTCAGGAGA:W7(V451_D-1)
Want to move edge Edge(468->469,w:2.0)(A:W-1(V468_D-1)->T:W-1(V469_D-1)) to (GTGTCTTAACTCAGGAGA:W7(V451_D-1)->T:W-1(V469_D-1)
	adding edge: GTGTCTTAACTCAGGAGA:W7(V451_D-1) to T:W-1(V469_D-1)
removing edge Edge(468->469,w:2.0)(A:W-1(V468_D-1)->T:W-1(V469_D-1))
removing edge Edge(451->468,w:2.0)(GTGTCTTAACTCAGGAGA:W7(V451_D-1)->A:W-1(V468_D-1))
Found potential edge: Edge(451->469,w:2.0) between GTGTCTTAACTCAGGAGA:W7(V451_D-1) and T:W-1(V469_D-1)
removing vertex T:W-1(V469_D-1) was concatenated into GTGTCTTAACTCAGGAGAT:W7(V451_D-1)
Want to move edge Edge(469->470,w:2.0)(T:W-1(V469_D-1)->C:W-1(V470_D-1)) to (GTGTCTTAACTCAGGAGAT:W7(V451_D-1)->C:W-1(V470_D-1)
	adding edge: GTGTCTTAACTCAGGAGAT:W7(V451_D-1) to C:W-1(V470_D-1)
removing edge Edge(469->470,w:2.0)(T:W-1(V469_D-1)->C:W-1(V470_D-1))
removing edge Edge(451->469,w:2.0)(GTGTCTTAACTCAGGAGAT:W7(V451_D-1)->T:W-1(V469_D-1))
Found potential edge: Edge(451->470,w:2.0) between GTGTCTTAACTCAGGAGAT:W7(V451_D-1) and C:W-1(V470_D-1)
removing vertex C:W-1(V470_D-1) was concatenated into GTGTCTTAACTCAGGAGATC:W7(V451_D-1)
Want to move edge Edge(470->471,w:2.0)(C:W-1(V470_D-1)->A:W-1(V471_D-1)) to (GTGTCTTAACTCAGGAGATC:W7(V451_D-1)->A:W-1(V471_D-1)
	adding edge: GTGTCTTAACTCAGGAGATC:W7(V451_D-1) to A:W-1(V471_D-1)
removing edge Edge(470->471,w:2.0)(C:W-1(V470_D-1)->A:W-1(V471_D-1))
removing edge Edge(451->470,w:2.0)(GTGTCTTAACTCAGGAGATC:W7(V451_D-1)->C:W-1(V470_D-1))
Found potential edge: Edge(451->471,w:2.0) between GTGTCTTAACTCAGGAGATC:W7(V451_D-1) and A:W-1(V471_D-1)
removing vertex A:W-1(V471_D-1) was concatenated into GTGTCTTAACTCAGGAGATCA:W6(V451_D-1)
Want to move edge Edge(471->472,w:2.0)(A:W-1(V471_D-1)->T:W-1(V472_D-1)) to (GTGTCTTAACTCAGGAGATCA:W6(V451_D-1)->T:W-1(V472_D-1)
	adding edge: GTGTCTTAACTCAGGAGATCA:W6(V451_D-1) to T:W-1(V472_D-1)
removing edge Edge(471->472,w:2.0)(A:W-1(V471_D-1)->T:W-1(V472_D-1))
removing edge Edge(451->471,w:2.0)(GTGTCTTAACTCAGGAGATCA:W6(V451_D-1)->A:W-1(V471_D-1))
Found potential edge: Edge(451->472,w:2.0) between GTGTCTTAACTCAGGAGATCA:W6(V451_D-1) and T:W-1(V472_D-1)
removing vertex T:W-1(V472_D-1) was concatenated into GTGTCTTAACTCAGGAGATCAT:W6(V451_D-1)
Want to move edge Edge(472->473,w:2.0)(T:W-1(V472_D-1)->G:W-1(V473_D-1)) to (GTGTCTTAACTCAGGAGATCAT:W6(V451_D-1)->G:W-1(V473_D-1)
	adding edge: GTGTCTTAACTCAGGAGATCAT:W6(V451_D-1) to G:W-1(V473_D-1)
removing edge Edge(472->473,w:2.0)(T:W-1(V472_D-1)->G:W-1(V473_D-1))
removing edge Edge(451->472,w:2.0)(GTGTCTTAACTCAGGAGATCAT:W6(V451_D-1)->T:W-1(V472_D-1))
Found potential edge: Edge(451->473,w:2.0) between GTGTCTTAACTCAGGAGATCAT:W6(V451_D-1) and G:W-1(V473_D-1)
removing vertex G:W-1(V473_D-1) was concatenated into GTGTCTTAACTCAGGAGATCATG:W6(V451_D-1)
Want to move edge Edge(473->474,w:4.0)(G:W-1(V473_D-1)->G:W-1(V474_D-1)) to (GTGTCTTAACTCAGGAGATCATG:W6(V451_D-1)->G:W-1(V474_D-1)
	adding edge: GTGTCTTAACTCAGGAGATCATG:W6(V451_D-1) to G:W-1(V474_D-1)
removing edge Edge(473->474,w:4.0)(G:W-1(V473_D-1)->G:W-1(V474_D-1))
removing edge Edge(451->473,w:2.0)(GTGTCTTAACTCAGGAGATCATG:W6(V451_D-1)->G:W-1(V473_D-1))
Found potential edge: Edge(451->474,w:4.0) between GTGTCTTAACTCAGGAGATCATG:W6(V451_D-1) and G:W-1(V474_D-1)
removing vertex G:W-1(V474_D-1) was concatenated into GTGTCTTAACTCAGGAGATCATGG:W6(V451_D-1)
Want to move edge Edge(474->475,w:2.0)(G:W-1(V474_D-1)->T:W-1(V475_D-1)) to (GTGTCTTAACTCAGGAGATCATGG:W6(V451_D-1)->T:W-1(V475_D-1)
	adding edge: GTGTCTTAACTCAGGAGATCATGG:W6(V451_D-1) to T:W-1(V475_D-1)
removing edge Edge(474->475,w:2.0)(G:W-1(V474_D-1)->T:W-1(V475_D-1))
removing edge Edge(451->474,w:4.0)(GTGTCTTAACTCAGGAGATCATGG:W6(V451_D-1)->G:W-1(V474_D-1))
Found potential edge: Edge(451->475,w:2.0) between GTGTCTTAACTCAGGAGATCATGG:W6(V451_D-1) and T:W-1(V475_D-1)
removing vertex T:W-1(V475_D-1) was concatenated into GTGTCTTAACTCAGGAGATCATGGT:W6(V451_D-1)
Want to move edge Edge(475->476,w:2.0)(T:W-1(V475_D-1)->A:W-1(V476_D-1)) to (GTGTCTTAACTCAGGAGATCATGGT:W6(V451_D-1)->A:W-1(V476_D-1)
	adding edge: GTGTCTTAACTCAGGAGATCATGGT:W6(V451_D-1) to A:W-1(V476_D-1)
removing edge Edge(475->476,w:2.0)(T:W-1(V475_D-1)->A:W-1(V476_D-1))
removing edge Edge(451->475,w:2.0)(GTGTCTTAACTCAGGAGATCATGGT:W6(V451_D-1)->T:W-1(V475_D-1))
Found potential edge: Edge(451->476,w:2.0) between GTGTCTTAACTCAGGAGATCATGGT:W6(V451_D-1) and A:W-1(V476_D-1)
removing vertex A:W-1(V476_D-1) was concatenated into GTGTCTTAACTCAGGAGATCATGGTA:W6(V451_D-1)
Want to move edge Edge(476->477,w:2.0)(A:W-1(V476_D-1)->G:W-1(V477_D-1)) to (GTGTCTTAACTCAGGAGATCATGGTA:W6(V451_D-1)->G:W-1(V477_D-1)
	adding edge: GTGTCTTAACTCAGGAGATCATGGTA:W6(V451_D-1) to G:W-1(V477_D-1)
removing edge Edge(476->477,w:2.0)(A:W-1(V476_D-1)->G:W-1(V477_D-1))
removing edge Edge(451->476,w:2.0)(GTGTCTTAACTCAGGAGATCATGGTA:W6(V451_D-1)->A:W-1(V476_D-1))
Found potential edge: Edge(451->477,w:2.0) between GTGTCTTAACTCAGGAGATCATGGTA:W6(V451_D-1) and G:W-1(V477_D-1)
removing vertex G:W-1(V477_D-1) was concatenated into GTGTCTTAACTCAGGAGATCATGGTAG:W5(V451_D-1)
Want to move edge Edge(477->478,w:2.0)(G:W-1(V477_D-1)->G:W-1(V478_D-1)) to (GTGTCTTAACTCAGGAGATCATGGTAG:W5(V451_D-1)->G:W-1(V478_D-1)
	adding edge: GTGTCTTAACTCAGGAGATCATGGTAG:W5(V451_D-1) to G:W-1(V478_D-1)
removing edge Edge(477->478,w:2.0)(G:W-1(V477_D-1)->G:W-1(V478_D-1))
removing edge Edge(451->477,w:2.0)(GTGTCTTAACTCAGGAGATCATGGTAG:W5(V451_D-1)->G:W-1(V477_D-1))
Found potential edge: Edge(451->478,w:2.0) between GTGTCTTAACTCAGGAGATCATGGTAG:W5(V451_D-1) and G:W-1(V478_D-1)
removing vertex G:W-1(V478_D-1) was concatenated into GTGTCTTAACTCAGGAGATCATGGTAGG:W5(V451_D-1)
Want to move edge Edge(478->479,w:2.0)(G:W-1(V478_D-1)->G:W-1(V479_D-1)) to (GTGTCTTAACTCAGGAGATCATGGTAGG:W5(V451_D-1)->G:W-1(V479_D-1)
	adding edge: GTGTCTTAACTCAGGAGATCATGGTAGG:W5(V451_D-1) to G:W-1(V479_D-1)
removing edge Edge(478->479,w:2.0)(G:W-1(V478_D-1)->G:W-1(V479_D-1))
removing edge Edge(451->478,w:2.0)(GTGTCTTAACTCAGGAGATCATGGTAGG:W5(V451_D-1)->G:W-1(V478_D-1))
Found potential edge: Edge(451->479,w:2.0) between GTGTCTTAACTCAGGAGATCATGGTAGG:W5(V451_D-1) and G:W-1(V479_D-1)
removing vertex G:W-1(V479_D-1) was concatenated into GTGTCTTAACTCAGGAGATCATGGTAGGG:W5(V451_D-1)
Want to move edge Edge(479->480,w:2.0)(G:W-1(V479_D-1)->A:W-1(V480_D-1)) to (GTGTCTTAACTCAGGAGATCATGGTAGGG:W5(V451_D-1)->A:W-1(V480_D-1)
	adding edge: GTGTCTTAACTCAGGAGATCATGGTAGGG:W5(V451_D-1) to A:W-1(V480_D-1)
removing edge Edge(479->480,w:2.0)(G:W-1(V479_D-1)->A:W-1(V480_D-1))
removing edge Edge(451->479,w:2.0)(GTGTCTTAACTCAGGAGATCATGGTAGGG:W5(V451_D-1)->G:W-1(V479_D-1))
Found potential edge: Edge(451->480,w:2.0) between GTGTCTTAACTCAGGAGATCATGGTAGGG:W5(V451_D-1) and A:W-1(V480_D-1)
removing vertex A:W-1(V480_D-1) was concatenated into GTGTCTTAACTCAGGAGATCATGGTAGGGA:W5(V451_D-1)
Want to move edge Edge(480->481,w:2.0)(A:W-1(V480_D-1)->A:W-1(V481_D-1)) to (GTGTCTTAACTCAGGAGATCATGGTAGGGA:W5(V451_D-1)->A:W-1(V481_D-1)
	adding edge: GTGTCTTAACTCAGGAGATCATGGTAGGGA:W5(V451_D-1) to A:W-1(V481_D-1)
removing edge Edge(480->481,w:2.0)(A:W-1(V480_D-1)->A:W-1(V481_D-1))
removing edge Edge(451->480,w:2.0)(GTGTCTTAACTCAGGAGATCATGGTAGGGA:W5(V451_D-1)->A:W-1(V480_D-1))
Found potential edge: Edge(451->481,w:2.0) between GTGTCTTAACTCAGGAGATCATGGTAGGGA:W5(V451_D-1) and A:W-1(V481_D-1)
removing vertex A:W-1(V481_D-1) was concatenated into GTGTCTTAAC...TGGTAGGGAA:W5(V451_D-1)
Want to move edge Edge(481->482,w:2.0)(A:W-1(V481_D-1)->G:W-1(V482_D-1)) to (GTGTCTTAAC...TGGTAGGGAA:W5(V451_D-1)->G:W-1(V482_D-1)
	adding edge: GTGTCTTAAC...TGGTAGGGAA:W5(V451_D-1) to G:W-1(V482_D-1)
removing edge Edge(481->482,w:2.0)(A:W-1(V481_D-1)->G:W-1(V482_D-1))
removing edge Edge(451->481,w:2.0)(GTGTCTTAAC...TGGTAGGGAA:W5(V451_D-1)->A:W-1(V481_D-1))
Found potential edge: Edge(451->482,w:2.0) between GTGTCTTAAC...TGGTAGGGAA:W5(V451_D-1) and G:W-1(V482_D-1)
removing vertex G:W-1(V482_D-1) was concatenated into GTGTCTTAAC...GGTAGGGAAG:W5(V451_D-1)
Want to move edge Edge(482->483,w:2.0)(G:W-1(V482_D-1)->G:W-1(V483_D-1)) to (GTGTCTTAAC...GGTAGGGAAG:W5(V451_D-1)->G:W-1(V483_D-1)
	adding edge: GTGTCTTAAC...GGTAGGGAAG:W5(V451_D-1) to G:W-1(V483_D-1)
removing edge Edge(482->483,w:2.0)(G:W-1(V482_D-1)->G:W-1(V483_D-1))
removing edge Edge(451->482,w:2.0)(GTGTCTTAAC...GGTAGGGAAG:W5(V451_D-1)->G:W-1(V482_D-1))
Found potential edge: Edge(451->483,w:2.0) between GTGTCTTAAC...GGTAGGGAAG:W5(V451_D-1) and G:W-1(V483_D-1)
removing vertex G:W-1(V483_D-1) was concatenated into GTGTCTTAAC...GTAGGGAAGG:W5(V451_D-1)
Want to move edge Edge(483->484,w:2.0)(G:W-1(V483_D-1)->G:W-1(V484_D-1)) to (GTGTCTTAAC...GTAGGGAAGG:W5(V451_D-1)->G:W-1(V484_D-1)
	adding edge: GTGTCTTAAC...GTAGGGAAGG:W5(V451_D-1) to G:W-1(V484_D-1)
removing edge Edge(483->484,w:2.0)(G:W-1(V483_D-1)->G:W-1(V484_D-1))
removing edge Edge(451->483,w:2.0)(GTGTCTTAAC...GTAGGGAAGG:W5(V451_D-1)->G:W-1(V483_D-1))
Found potential edge: Edge(451->484,w:2.0) between GTGTCTTAAC...GTAGGGAAGG:W5(V451_D-1) and G:W-1(V484_D-1)
removing vertex G:W-1(V484_D-1) was concatenated into GTGTCTTAAC...TAGGGAAGGG:W5(V451_D-1)
Want to move edge Edge(484->485,w:2.0)(G:W-1(V484_D-1)->G:W-1(V485_D-1)) to (GTGTCTTAAC...TAGGGAAGGG:W5(V451_D-1)->G:W-1(V485_D-1)
	adding edge: GTGTCTTAAC...TAGGGAAGGG:W5(V451_D-1) to G:W-1(V485_D-1)
removing edge Edge(484->485,w:2.0)(G:W-1(V484_D-1)->G:W-1(V485_D-1))
removing edge Edge(451->484,w:2.0)(GTGTCTTAAC...TAGGGAAGGG:W5(V451_D-1)->G:W-1(V484_D-1))
Found potential edge: Edge(451->485,w:2.0) between GTGTCTTAAC...TAGGGAAGGG:W5(V451_D-1) and G:W-1(V485_D-1)
removing vertex G:W-1(V485_D-1) was concatenated into GTGTCTTAAC...AGGGAAGGGG:W5(V451_D-1)
Want to move edge Edge(485->486,w:4.0)(G:W-1(V485_D-1)->T:W-1(V486_D-1)) to (GTGTCTTAAC...AGGGAAGGGG:W5(V451_D-1)->T:W-1(V486_D-1)
	adding edge: GTGTCTTAAC...AGGGAAGGGG:W5(V451_D-1) to T:W-1(V486_D-1)
removing edge Edge(485->486,w:4.0)(G:W-1(V485_D-1)->T:W-1(V486_D-1))
removing edge Edge(451->485,w:2.0)(GTGTCTTAAC...AGGGAAGGGG:W5(V451_D-1)->G:W-1(V485_D-1))
Found potential edge: Edge(451->486,w:4.0) between GTGTCTTAAC...AGGGAAGGGG:W5(V451_D-1) and T:W-1(V486_D-1)
removing vertex T:W-1(V486_D-1) was concatenated into GTGTCTTAAC...GGGAAGGGGT:W5(V451_D-1)
Want to move edge Edge(486->487,w:4.0)(T:W-1(V486_D-1)->C:W-1(V487_D-1)) to (GTGTCTTAAC...GGGAAGGGGT:W5(V451_D-1)->C:W-1(V487_D-1)
	adding edge: GTGTCTTAAC...GGGAAGGGGT:W5(V451_D-1) to C:W-1(V487_D-1)
removing edge Edge(486->487,w:4.0)(T:W-1(V486_D-1)->C:W-1(V487_D-1))
removing edge Edge(451->486,w:4.0)(GTGTCTTAAC...GGGAAGGGGT:W5(V451_D-1)->T:W-1(V486_D-1))
Found potential edge: Edge(451->487,w:4.0) between GTGTCTTAAC...GGGAAGGGGT:W5(V451_D-1) and C:W-1(V487_D-1)
removing vertex C:W-1(V487_D-1) was concatenated into GTGTCTTAAC...GGAAGGGGTC:W5(V451_D-1)
Want to move edge Edge(487->488,w:4.0)(C:W-1(V487_D-1)->A:W-1(V488_D-1)) to (GTGTCTTAAC...GGAAGGGGTC:W5(V451_D-1)->A:W-1(V488_D-1)
	adding edge: GTGTCTTAAC...GGAAGGGGTC:W5(V451_D-1) to A:W-1(V488_D-1)
removing edge Edge(487->488,w:4.0)(C:W-1(V487_D-1)->A:W-1(V488_D-1))
removing edge Edge(451->487,w:4.0)(GTGTCTTAAC...GGAAGGGGTC:W5(V451_D-1)->C:W-1(V487_D-1))
Found potential edge: Edge(451->488,w:4.0) between GTGTCTTAAC...GGAAGGGGTC:W5(V451_D-1) and A:W-1(V488_D-1)
removing vertex A:W-1(V488_D-1) was concatenated into GTGTCTTAAC...GAAGGGGTCA:W5(V451_D-1)
Want to move edge Edge(488->489,w:4.0)(A:W-1(V488_D-1)->G:W-1(V489_D-1)) to (GTGTCTTAAC...GAAGGGGTCA:W5(V451_D-1)->G:W-1(V489_D-1)
	adding edge: GTGTCTTAAC...GAAGGGGTCA:W5(V451_D-1) to G:W-1(V489_D-1)
removing edge Edge(488->489,w:4.0)(A:W-1(V488_D-1)->G:W-1(V489_D-1))
removing edge Edge(451->488,w:4.0)(GTGTCTTAAC...GAAGGGGTCA:W5(V451_D-1)->A:W-1(V488_D-1))
Found potential edge: Edge(451->489,w:4.0) between GTGTCTTAAC...GAAGGGGTCA:W5(V451_D-1) and G:W-1(V489_D-1)
removing vertex G:W-1(V489_D-1) was concatenated into GTGTCTTAAC...AAGGGGTCAG:W5(V451_D-1)
Want to move edge Edge(489->490,w:4.0)(G:W-1(V489_D-1)->G:W-1(V490_D-1)) to (GTGTCTTAAC...AAGGGGTCAG:W5(V451_D-1)->G:W-1(V490_D-1)
	adding edge: GTGTCTTAAC...AAGGGGTCAG:W5(V451_D-1) to G:W-1(V490_D-1)
removing edge Edge(489->490,w:4.0)(G:W-1(V489_D-1)->G:W-1(V490_D-1))
removing edge Edge(451->489,w:4.0)(GTGTCTTAAC...AAGGGGTCAG:W5(V451_D-1)->G:W-1(V489_D-1))
Found potential edge: Edge(451->490,w:4.0) between GTGTCTTAAC...AAGGGGTCAG:W5(V451_D-1) and G:W-1(V490_D-1)
removing vertex G:W-1(V490_D-1) was concatenated into GTGTCTTAAC...AGGGGTCAGG:W5(V451_D-1)
Want to move edge Edge(490->491,w:4.0)(G:W-1(V490_D-1)->C:W-1(V491_D-1)) to (GTGTCTTAAC...AGGGGTCAGG:W5(V451_D-1)->C:W-1(V491_D-1)
	adding edge: GTGTCTTAAC...AGGGGTCAGG:W5(V451_D-1) to C:W-1(V491_D-1)
removing edge Edge(490->491,w:4.0)(G:W-1(V490_D-1)->C:W-1(V491_D-1))
removing edge Edge(451->490,w:4.0)(GTGTCTTAAC...AGGGGTCAGG:W5(V451_D-1)->G:W-1(V490_D-1))
Found potential edge: Edge(451->491,w:4.0) between GTGTCTTAAC...AGGGGTCAGG:W5(V451_D-1) and C:W-1(V491_D-1)
removing vertex C:W-1(V491_D-1) was concatenated into GTGTCTTAAC...GGGGTCAGGC:W5(V451_D-1)
Want to move edge Edge(491->492,w:4.0)(C:W-1(V491_D-1)->C:W-1(V492_D-1)) to (GTGTCTTAAC...GGGGTCAGGC:W5(V451_D-1)->C:W-1(V492_D-1)
	adding edge: GTGTCTTAAC...GGGGTCAGGC:W5(V451_D-1) to C:W-1(V492_D-1)
removing edge Edge(491->492,w:4.0)(C:W-1(V491_D-1)->C:W-1(V492_D-1))
removing edge Edge(451->491,w:4.0)(GTGTCTTAAC...GGGGTCAGGC:W5(V451_D-1)->C:W-1(V491_D-1))
Found potential edge: Edge(451->492,w:4.0) between GTGTCTTAAC...GGGGTCAGGC:W5(V451_D-1) and C:W-1(V492_D-1)
removing vertex C:W-1(V492_D-1) was concatenated into GTGTCTTAAC...GGGTCAGGCC:W5(V451_D-1)
Want to move edge Edge(492->493,w:4.0)(C:W-1(V492_D-1)->A:W-1(V493_D-1)) to (GTGTCTTAAC...GGGTCAGGCC:W5(V451_D-1)->A:W-1(V493_D-1)
	adding edge: GTGTCTTAAC...GGGTCAGGCC:W5(V451_D-1) to A:W-1(V493_D-1)
removing edge Edge(492->493,w:4.0)(C:W-1(V492_D-1)->A:W-1(V493_D-1))
removing edge Edge(451->492,w:4.0)(GTGTCTTAAC...GGGTCAGGCC:W5(V451_D-1)->C:W-1(V492_D-1))
Found potential edge: Edge(451->493,w:4.0) between GTGTCTTAAC...GGGTCAGGCC:W5(V451_D-1) and A:W-1(V493_D-1)
removing vertex A:W-1(V493_D-1) was concatenated into GTGTCTTAAC...GGTCAGGCCA:W5(V451_D-1)
Want to move edge Edge(493->494,w:4.0)(A:W-1(V493_D-1)->C:W-1(V494_D-1)) to (GTGTCTTAAC...GGTCAGGCCA:W5(V451_D-1)->C:W-1(V494_D-1)
	adding edge: GTGTCTTAAC...GGTCAGGCCA:W5(V451_D-1) to C:W-1(V494_D-1)
removing edge Edge(493->494,w:4.0)(A:W-1(V493_D-1)->C:W-1(V494_D-1))
removing edge Edge(451->493,w:4.0)(GTGTCTTAAC...GGTCAGGCCA:W5(V451_D-1)->A:W-1(V493_D-1))
Found potential edge: Edge(451->494,w:4.0) between GTGTCTTAAC...GGTCAGGCCA:W5(V451_D-1) and C:W-1(V494_D-1)
removing vertex C:W-1(V494_D-1) was concatenated into GTGTCTTAAC...GTCAGGCCAC:W5(V451_D-1)
Want to move edge Edge(494->495,w:4.0)(C:W-1(V494_D-1)->T:W-1(V495_D-1)) to (GTGTCTTAAC...GTCAGGCCAC:W5(V451_D-1)->T:W-1(V495_D-1)
	adding edge: GTGTCTTAAC...GTCAGGCCAC:W5(V451_D-1) to T:W-1(V495_D-1)
removing edge Edge(494->495,w:4.0)(C:W-1(V494_D-1)->T:W-1(V495_D-1))
removing edge Edge(451->494,w:4.0)(GTGTCTTAAC...GTCAGGCCAC:W5(V451_D-1)->C:W-1(V494_D-1))
Found potential edge: Edge(451->495,w:4.0) between GTGTCTTAAC...GTCAGGCCAC:W5(V451_D-1) and T:W-1(V495_D-1)
removing vertex T:W-1(V495_D-1) was concatenated into GTGTCTTAAC...TCAGGCCACT:W5(V451_D-1)
Want to move edge Edge(495->496,w:4.0)(T:W-1(V495_D-1)->T:W-1(V496_D-1)) to (GTGTCTTAAC...TCAGGCCACT:W5(V451_D-1)->T:W-1(V496_D-1)
	adding edge: GTGTCTTAAC...TCAGGCCACT:W5(V451_D-1) to T:W-1(V496_D-1)
removing edge Edge(495->496,w:4.0)(T:W-1(V495_D-1)->T:W-1(V496_D-1))
removing edge Edge(451->495,w:4.0)(GTGTCTTAAC...TCAGGCCACT:W5(V451_D-1)->T:W-1(V495_D-1))
Found potential edge: Edge(451->496,w:4.0) between GTGTCTTAAC...TCAGGCCACT:W5(V451_D-1) and T:W-1(V496_D-1)
removing vertex T:W-1(V496_D-1) was concatenated into GTGTCTTAAC...CAGGCCACTT:W4(V451_D-1)
Want to move edge Edge(496->497,w:4.0)(T:W-1(V496_D-1)->C:W-1(V497_D-1)) to (GTGTCTTAAC...CAGGCCACTT:W4(V451_D-1)->C:W-1(V497_D-1)
	adding edge: GTGTCTTAAC...CAGGCCACTT:W4(V451_D-1) to C:W-1(V497_D-1)
removing edge Edge(496->497,w:4.0)(T:W-1(V496_D-1)->C:W-1(V497_D-1))
removing edge Edge(451->496,w:4.0)(GTGTCTTAAC...CAGGCCACTT:W4(V451_D-1)->T:W-1(V496_D-1))
Found potential edge: Edge(451->497,w:4.0) between GTGTCTTAAC...CAGGCCACTT:W4(V451_D-1) and C:W-1(V497_D-1)
removing vertex C:W-1(V497_D-1) was concatenated into GTGTCTTAAC...AGGCCACTTC:W4(V451_D-1)
Want to move edge Edge(497->498,w:4.0)(C:W-1(V497_D-1)->A:W-1(V498_D-1)) to (GTGTCTTAAC...AGGCCACTTC:W4(V451_D-1)->A:W-1(V498_D-1)
	adding edge: GTGTCTTAAC...AGGCCACTTC:W4(V451_D-1) to A:W-1(V498_D-1)
removing edge Edge(497->498,w:4.0)(C:W-1(V497_D-1)->A:W-1(V498_D-1))
removing edge Edge(451->497,w:4.0)(GTGTCTTAAC...AGGCCACTTC:W4(V451_D-1)->C:W-1(V497_D-1))
Found potential edge: Edge(451->498,w:4.0) between GTGTCTTAAC...AGGCCACTTC:W4(V451_D-1) and A:W-1(V498_D-1)
removing vertex A:W-1(V498_D-1) was concatenated into GTGTCTTAAC...GGCCACTTCA:W4(V451_D-1)
Want to move edge Edge(498->499,w:4.0)(A:W-1(V498_D-1)->C:W-1(V499_D-1)) to (GTGTCTTAAC...GGCCACTTCA:W4(V451_D-1)->C:W-1(V499_D-1)
	adding edge: GTGTCTTAAC...GGCCACTTCA:W4(V451_D-1) to C:W-1(V499_D-1)
removing edge Edge(498->499,w:4.0)(A:W-1(V498_D-1)->C:W-1(V499_D-1))
removing edge Edge(451->498,w:4.0)(GTGTCTTAAC...GGCCACTTCA:W4(V451_D-1)->A:W-1(V498_D-1))
Found potential edge: Edge(451->499,w:4.0) between GTGTCTTAAC...GGCCACTTCA:W4(V451_D-1) and C:W-1(V499_D-1)
removing vertex C:W-1(V499_D-1) was concatenated into GTGTCTTAAC...GCCACTTCAC:W4(V451_D-1)
Want to move edge Edge(499->500,w:4.0)(C:W-1(V499_D-1)->A:W-1(V500_D-1)) to (GTGTCTTAAC...GCCACTTCAC:W4(V451_D-1)->A:W-1(V500_D-1)
	adding edge: GTGTCTTAAC...GCCACTTCAC:W4(V451_D-1) to A:W-1(V500_D-1)
removing edge Edge(499->500,w:4.0)(C:W-1(V499_D-1)->A:W-1(V500_D-1))
removing edge Edge(451->499,w:4.0)(GTGTCTTAAC...GCCACTTCAC:W4(V451_D-1)->C:W-1(V499_D-1))
Found potential edge: Edge(451->500,w:4.0) between GTGTCTTAAC...GCCACTTCAC:W4(V451_D-1) and A:W-1(V500_D-1)
removing vertex A:W-1(V500_D-1) was concatenated into GTGTCTTAAC...CCACTTCACA:W4(V451_D-1)
Want to move edge Edge(500->501,w:4.0)(A:W-1(V500_D-1)->A:W-1(V501_D-1)) to (GTGTCTTAAC...CCACTTCACA:W4(V451_D-1)->A:W-1(V501_D-1)
	adding edge: GTGTCTTAAC...CCACTTCACA:W4(V451_D-1) to A:W-1(V501_D-1)
removing edge Edge(500->501,w:4.0)(A:W-1(V500_D-1)->A:W-1(V501_D-1))
removing edge Edge(451->500,w:4.0)(GTGTCTTAAC...CCACTTCACA:W4(V451_D-1)->A:W-1(V500_D-1))
Found potential edge: Edge(451->501,w:4.0) between GTGTCTTAAC...CCACTTCACA:W4(V451_D-1) and A:W-1(V501_D-1)
removing vertex A:W-1(V501_D-1) was concatenated into GTGTCTTAAC...CACTTCACAA:W4(V451_D-1)
Want to move edge Edge(501->502,w:4.0)(A:W-1(V501_D-1)->G:W-1(V502_D-1)) to (GTGTCTTAAC...CACTTCACAA:W4(V451_D-1)->G:W-1(V502_D-1)
	adding edge: GTGTCTTAAC...CACTTCACAA:W4(V451_D-1) to G:W-1(V502_D-1)
removing edge Edge(501->502,w:4.0)(A:W-1(V501_D-1)->G:W-1(V502_D-1))
removing edge Edge(451->501,w:4.0)(GTGTCTTAAC...CACTTCACAA:W4(V451_D-1)->A:W-1(V501_D-1))
Found potential edge: Edge(451->502,w:4.0) between GTGTCTTAAC...CACTTCACAA:W4(V451_D-1) and G:W-1(V502_D-1)
removing vertex G:W-1(V502_D-1) was concatenated into GTGTCTTAAC...ACTTCACAAG:W4(V451_D-1)
Want to move edge Edge(502->503,w:6.0)(G:W-1(V502_D-1)->G:W-1(V503_D-1)) to (GTGTCTTAAC...ACTTCACAAG:W4(V451_D-1)->G:W-1(V503_D-1)
	adding edge: GTGTCTTAAC...ACTTCACAAG:W4(V451_D-1) to G:W-1(V503_D-1)
removing edge Edge(502->503,w:6.0)(G:W-1(V502_D-1)->G:W-1(V503_D-1))
removing edge Edge(451->502,w:4.0)(GTGTCTTAAC...ACTTCACAAG:W4(V451_D-1)->G:W-1(V502_D-1))
Found potential edge: Edge(451->503,w:6.0) between GTGTCTTAAC...ACTTCACAAG:W4(V451_D-1) and G:W-1(V503_D-1)
removing vertex G:W-1(V503_D-1) was concatenated into GTGTCTTAAC...CTTCACAAGG:W4(V451_D-1)
Want to move edge Edge(503->504,w:6.0)(G:W-1(V503_D-1)->A:W-1(V504_D-1)) to (GTGTCTTAAC...CTTCACAAGG:W4(V451_D-1)->A:W-1(V504_D-1)
	adding edge: GTGTCTTAAC...CTTCACAAGG:W4(V451_D-1) to A:W-1(V504_D-1)
removing edge Edge(503->504,w:6.0)(G:W-1(V503_D-1)->A:W-1(V504_D-1))
removing edge Edge(451->503,w:6.0)(GTGTCTTAAC...CTTCACAAGG:W4(V451_D-1)->G:W-1(V503_D-1))
Found potential edge: Edge(451->504,w:6.0) between GTGTCTTAAC...CTTCACAAGG:W4(V451_D-1) and A:W-1(V504_D-1)
removing vertex A:W-1(V504_D-1) was concatenated into GTGTCTTAAC...TTCACAAGGA:W4(V451_D-1)
Want to move edge Edge(504->505,w:8.0)(A:W-1(V504_D-1)->G:W-1(V505_D-1)) to (GTGTCTTAAC...TTCACAAGGA:W4(V451_D-1)->G:W-1(V505_D-1)
	adding edge: GTGTCTTAAC...TTCACAAGGA:W4(V451_D-1) to G:W-1(V505_D-1)
removing edge Edge(504->505,w:8.0)(A:W-1(V504_D-1)->G:W-1(V505_D-1))
removing edge Edge(451->504,w:6.0)(GTGTCTTAAC...TTCACAAGGA:W4(V451_D-1)->A:W-1(V504_D-1))
Found potential edge: Edge(451->505,w:8.0) between GTGTCTTAAC...TTCACAAGGA:W4(V451_D-1) and G:W-1(V505_D-1)
removing vertex G:W-1(V505_D-1) was concatenated into GTGTCTTAAC...TCACAAGGAG:W5(V451_D-1)
Want to move edge Edge(505->506,w:8.0)(G:W-1(V505_D-1)->C:W-1(V506_D-1)) to (GTGTCTTAAC...TCACAAGGAG:W5(V451_D-1)->C:W-1(V506_D-1)
	adding edge: GTGTCTTAAC...TCACAAGGAG:W5(V451_D-1) to C:W-1(V506_D-1)
removing edge Edge(505->506,w:8.0)(G:W-1(V505_D-1)->C:W-1(V506_D-1))
removing edge Edge(451->505,w:8.0)(GTGTCTTAAC...TCACAAGGAG:W5(V451_D-1)->G:W-1(V505_D-1))
Found potential edge: Edge(451->506,w:8.0) between GTGTCTTAAC...TCACAAGGAG:W5(V451_D-1) and C:W-1(V506_D-1)
removing vertex C:W-1(V506_D-1) was concatenated into GTGTCTTAAC...CACAAGGAGC:W5(V451_D-1)
Want to move edge Edge(506->507,w:8.0)(C:W-1(V506_D-1)->A:W-1(V507_D-1)) to (GTGTCTTAAC...CACAAGGAGC:W5(V451_D-1)->A:W-1(V507_D-1)
	adding edge: GTGTCTTAAC...CACAAGGAGC:W5(V451_D-1) to A:W-1(V507_D-1)
removing edge Edge(506->507,w:8.0)(C:W-1(V506_D-1)->A:W-1(V507_D-1))
removing edge Edge(451->506,w:8.0)(GTGTCTTAAC...CACAAGGAGC:W5(V451_D-1)->C:W-1(V506_D-1))
Found potential edge: Edge(451->507,w:8.0) between GTGTCTTAAC...CACAAGGAGC:W5(V451_D-1) and A:W-1(V507_D-1)
removing vertex A:W-1(V507_D-1) was concatenated into GTGTCTTAAC...ACAAGGAGCA:W5(V451_D-1)
Want to move edge Edge(507->508,w:10.0)(A:W-1(V507_D-1)->G:W-1(V508_D-1)) to (GTGTCTTAAC...ACAAGGAGCA:W5(V451_D-1)->G:W-1(V508_D-1)
	adding edge: GTGTCTTAAC...ACAAGGAGCA:W5(V451_D-1) to G:W-1(V508_D-1)
removing edge Edge(507->508,w:10.0)(A:W-1(V507_D-1)->G:W-1(V508_D-1))
removing edge Edge(451->507,w:8.0)(GTGTCTTAAC...ACAAGGAGCA:W5(V451_D-1)->A:W-1(V507_D-1))
Found potential edge: Edge(451->508,w:10.0) between GTGTCTTAAC...ACAAGGAGCA:W5(V451_D-1) and G:W-1(V508_D-1)
removing vertex G:W-1(V508_D-1) was concatenated into GTGTCTTAAC...CAAGGAGCAG:W5(V451_D-1)
Want to move edge Edge(508->509,w:10.0)(G:W-1(V508_D-1)->A:W-1(V509_D-1)) to (GTGTCTTAAC...CAAGGAGCAG:W5(V451_D-1)->A:W-1(V509_D-1)
	adding edge: GTGTCTTAAC...CAAGGAGCAG:W5(V451_D-1) to A:W-1(V509_D-1)
removing edge Edge(508->509,w:10.0)(G:W-1(V508_D-1)->A:W-1(V509_D-1))
removing edge Edge(451->508,w:10.0)(GTGTCTTAAC...CAAGGAGCAG:W5(V451_D-1)->G:W-1(V508_D-1))
Found potential edge: Edge(451->509,w:10.0) between GTGTCTTAAC...CAAGGAGCAG:W5(V451_D-1) and A:W-1(V509_D-1)
removing vertex A:W-1(V509_D-1) was concatenated into GTGTCTTAAC...AAGGAGCAGA:W5(V451_D-1)
Want to move edge Edge(509->510,w:10.0)(A:W-1(V509_D-1)->G:W-1(V510_D-1)) to (GTGTCTTAAC...AAGGAGCAGA:W5(V451_D-1)->G:W-1(V510_D-1)
	adding edge: GTGTCTTAAC...AAGGAGCAGA:W5(V451_D-1) to G:W-1(V510_D-1)
removing edge Edge(509->510,w:10.0)(A:W-1(V509_D-1)->G:W-1(V510_D-1))
removing edge Edge(451->509,w:10.0)(GTGTCTTAAC...AAGGAGCAGA:W5(V451_D-1)->A:W-1(V509_D-1))
Found potential edge: Edge(451->510,w:10.0) between GTGTCTTAAC...AAGGAGCAGA:W5(V451_D-1) and G:W-1(V510_D-1)
removing vertex G:W-1(V510_D-1) was concatenated into GTGTCTTAAC...AGGAGCAGAG:W5(V451_D-1)
Want to move edge Edge(510->511,w:10.0)(G:W-1(V510_D-1)->T:W-1(V511_D-1)) to (GTGTCTTAAC...AGGAGCAGAG:W5(V451_D-1)->T:W-1(V511_D-1)
	adding edge: GTGTCTTAAC...AGGAGCAGAG:W5(V451_D-1) to T:W-1(V511_D-1)
removing edge Edge(510->511,w:10.0)(G:W-1(V510_D-1)->T:W-1(V511_D-1))
removing edge Edge(451->510,w:10.0)(GTGTCTTAAC...AGGAGCAGAG:W5(V451_D-1)->G:W-1(V510_D-1))
Found potential edge: Edge(451->511,w:10.0) between GTGTCTTAAC...AGGAGCAGAG:W5(V451_D-1) and T:W-1(V511_D-1)
removing vertex T:W-1(V511_D-1) was concatenated into GTGTCTTAAC...GGAGCAGAGT:W5(V451_D-1)
Want to move edge Edge(511->512,w:10.0)(T:W-1(V511_D-1)->T:W-1(V512_D-1)) to (GTGTCTTAAC...GGAGCAGAGT:W5(V451_D-1)->T:W-1(V512_D-1)
	adding edge: GTGTCTTAAC...GGAGCAGAGT:W5(V451_D-1) to T:W-1(V512_D-1)
removing edge Edge(511->512,w:10.0)(T:W-1(V511_D-1)->T:W-1(V512_D-1))
removing edge Edge(451->511,w:10.0)(GTGTCTTAAC...GGAGCAGAGT:W5(V451_D-1)->T:W-1(V511_D-1))
Found potential edge: Edge(451->512,w:10.0) between GTGTCTTAAC...GGAGCAGAGT:W5(V451_D-1) and T:W-1(V512_D-1)
removing vertex T:W-1(V512_D-1) was concatenated into GTGTCTTAAC...GAGCAGAGTT:W5(V451_D-1)
Want to move edge Edge(512->513,w:10.0)(T:W-1(V512_D-1)->A:W-1(V513_D-1)) to (GTGTCTTAAC...GAGCAGAGTT:W5(V451_D-1)->A:W-1(V513_D-1)
	adding edge: GTGTCTTAAC...GAGCAGAGTT:W5(V451_D-1) to A:W-1(V513_D-1)
removing edge Edge(512->513,w:10.0)(T:W-1(V512_D-1)->A:W-1(V513_D-1))
removing edge Edge(451->512,w:10.0)(GTGTCTTAAC...GAGCAGAGTT:W5(V451_D-1)->T:W-1(V512_D-1))
Found potential edge: Edge(451->513,w:10.0) between GTGTCTTAAC...GAGCAGAGTT:W5(V451_D-1) and A:W-1(V513_D-1)
removing vertex A:W-1(V513_D-1) was concatenated into GTGTCTTAAC...AGCAGAGTTA:W5(V451_D-1)
Want to move edge Edge(513->514,w:10.0)(A:W-1(V513_D-1)->G:W-1(V514_D-1)) to (GTGTCTTAAC...AGCAGAGTTA:W5(V451_D-1)->G:W-1(V514_D-1)
	adding edge: GTGTCTTAAC...AGCAGAGTTA:W5(V451_D-1) to G:W-1(V514_D-1)
removing edge Edge(513->514,w:10.0)(A:W-1(V513_D-1)->G:W-1(V514_D-1))
removing edge Edge(451->513,w:10.0)(GTGTCTTAAC...AGCAGAGTTA:W5(V451_D-1)->A:W-1(V513_D-1))
Found potential edge: Edge(451->514,w:10.0) between GTGTCTTAAC...AGCAGAGTTA:W5(V451_D-1) and G:W-1(V514_D-1)
removing vertex G:W-1(V514_D-1) was concatenated into GTGTCTTAAC...GCAGAGTTAG:W5(V451_D-1)
Want to move edge Edge(514->515,w:10.0)(G:W-1(V514_D-1)->G:W-1(V515_D-1)) to (GTGTCTTAAC...GCAGAGTTAG:W5(V451_D-1)->G:W-1(V515_D-1)
	adding edge: GTGTCTTAAC...GCAGAGTTAG:W5(V451_D-1) to G:W-1(V515_D-1)
removing edge Edge(514->515,w:10.0)(G:W-1(V514_D-1)->G:W-1(V515_D-1))
removing edge Edge(451->514,w:10.0)(GTGTCTTAAC...GCAGAGTTAG:W5(V451_D-1)->G:W-1(V514_D-1))
Found potential edge: Edge(451->515,w:10.0) between GTGTCTTAAC...GCAGAGTTAG:W5(V451_D-1) and G:W-1(V515_D-1)
removing vertex G:W-1(V515_D-1) was concatenated into GTGTCTTAAC...CAGAGTTAGG:W5(V451_D-1)
Want to move edge Edge(515->516,w:10.0)(G:W-1(V515_D-1)->A:W-1(V516_D-1)) to (GTGTCTTAAC...CAGAGTTAGG:W5(V451_D-1)->A:W-1(V516_D-1)
	adding edge: GTGTCTTAAC...CAGAGTTAGG:W5(V451_D-1) to A:W-1(V516_D-1)
removing edge Edge(515->516,w:10.0)(G:W-1(V515_D-1)->A:W-1(V516_D-1))
removing edge Edge(451->515,w:10.0)(GTGTCTTAAC...CAGAGTTAGG:W5(V451_D-1)->G:W-1(V515_D-1))
Found potential edge: Edge(451->516,w:10.0) between GTGTCTTAAC...CAGAGTTAGG:W5(V451_D-1) and A:W-1(V516_D-1)
removing vertex A:W-1(V516_D-1) was concatenated into GTGTCTTAAC...AGAGTTAGGA:W5(V451_D-1)
Want to move edge Edge(516->517,w:10.0)(A:W-1(V516_D-1)->A:W-1(V517_D-1)) to (GTGTCTTAAC...AGAGTTAGGA:W5(V451_D-1)->A:W-1(V517_D-1)
	adding edge: GTGTCTTAAC...AGAGTTAGGA:W5(V451_D-1) to A:W-1(V517_D-1)
removing edge Edge(516->517,w:10.0)(A:W-1(V516_D-1)->A:W-1(V517_D-1))
removing edge Edge(451->516,w:10.0)(GTGTCTTAAC...AGAGTTAGGA:W5(V451_D-1)->A:W-1(V516_D-1))
Found potential edge: Edge(451->517,w:10.0) between GTGTCTTAAC...AGAGTTAGGA:W5(V451_D-1) and A:W-1(V517_D-1)
removing vertex A:W-1(V517_D-1) was concatenated into GTGTCTTAAC...GAGTTAGGAA:W5(V451_D-1)
Want to move edge Edge(517->518,w:10.0)(A:W-1(V517_D-1)->G:W-1(V518_D-1)) to (GTGTCTTAAC...GAGTTAGGAA:W5(V451_D-1)->G:W-1(V518_D-1)
	adding edge: GTGTCTTAAC...GAGTTAGGAA:W5(V451_D-1) to G:W-1(V518_D-1)
removing edge Edge(517->518,w:10.0)(A:W-1(V517_D-1)->G:W-1(V518_D-1))
removing edge Edge(451->517,w:10.0)(GTGTCTTAAC...GAGTTAGGAA:W5(V451_D-1)->A:W-1(V517_D-1))
Found potential edge: Edge(451->518,w:10.0) between GTGTCTTAAC...GAGTTAGGAA:W5(V451_D-1) and G:W-1(V518_D-1)
removing vertex G:W-1(V518_D-1) was concatenated into GTGTCTTAAC...AGTTAGGAAG:W6(V451_D-1)
Want to move edge Edge(518->519,w:10.0)(G:W-1(V518_D-1)->C:W-1(V519_D-1)) to (GTGTCTTAAC...AGTTAGGAAG:W6(V451_D-1)->C:W-1(V519_D-1)
	adding edge: GTGTCTTAAC...AGTTAGGAAG:W6(V451_D-1) to C:W-1(V519_D-1)
removing edge Edge(518->519,w:10.0)(G:W-1(V518_D-1)->C:W-1(V519_D-1))
removing edge Edge(451->518,w:10.0)(GTGTCTTAAC...AGTTAGGAAG:W6(V451_D-1)->G:W-1(V518_D-1))
Found potential edge: Edge(451->519,w:10.0) between GTGTCTTAAC...AGTTAGGAAG:W6(V451_D-1) and C:W-1(V519_D-1)
removing vertex C:W-1(V519_D-1) was concatenated into GTGTCTTAAC...GTTAGGAAGC:W6(V451_D-1)
Want to move edge Edge(519->520,w:10.0)(C:W-1(V519_D-1)->T:W-1(V520_D-1)) to (GTGTCTTAAC...GTTAGGAAGC:W6(V451_D-1)->T:W-1(V520_D-1)
	adding edge: GTGTCTTAAC...GTTAGGAAGC:W6(V451_D-1) to T:W-1(V520_D-1)
removing edge Edge(519->520,w:10.0)(C:W-1(V519_D-1)->T:W-1(V520_D-1))
removing edge Edge(451->519,w:10.0)(GTGTCTTAAC...GTTAGGAAGC:W6(V451_D-1)->C:W-1(V519_D-1))
Found potential edge: Edge(451->520,w:10.0) between GTGTCTTAAC...GTTAGGAAGC:W6(V451_D-1) and T:W-1(V520_D-1)
removing vertex T:W-1(V520_D-1) was concatenated into GTGTCTTAAC...TTAGGAAGCT:W6(V451_D-1)
Want to move edge Edge(520->521,w:10.0)(T:W-1(V520_D-1)->C:W-1(V521_D-1)) to (GTGTCTTAAC...TTAGGAAGCT:W6(V451_D-1)->C:W-1(V521_D-1)
	adding edge: GTGTCTTAAC...TTAGGAAGCT:W6(V451_D-1) to C:W-1(V521_D-1)
removing edge Edge(520->521,w:10.0)(T:W-1(V520_D-1)->C:W-1(V521_D-1))
removing edge Edge(451->520,w:10.0)(GTGTCTTAAC...TTAGGAAGCT:W6(V451_D-1)->T:W-1(V520_D-1))
Found potential edge: Edge(451->521,w:10.0) between GTGTCTTAAC...TTAGGAAGCT:W6(V451_D-1) and C:W-1(V521_D-1)
removing vertex C:W-1(V521_D-1) was concatenated into GTGTCTTAAC...TAGGAAGCTC:W6(V451_D-1)
Want to move edge Edge(521->522,w:10.0)(C:W-1(V521_D-1)->C:W-1(V522_D-1)) to (GTGTCTTAAC...TAGGAAGCTC:W6(V451_D-1)->C:W-1(V522_D-1)
	adding edge: GTGTCTTAAC...TAGGAAGCTC:W6(V451_D-1) to C:W-1(V522_D-1)
removing edge Edge(521->522,w:10.0)(C:W-1(V521_D-1)->C:W-1(V522_D-1))
removing edge Edge(451->521,w:10.0)(GTGTCTTAAC...TAGGAAGCTC:W6(V451_D-1)->C:W-1(V521_D-1))
Found potential edge: Edge(451->522,w:10.0) between GTGTCTTAAC...TAGGAAGCTC:W6(V451_D-1) and C:W-1(V522_D-1)
removing vertex C:W-1(V522_D-1) was concatenated into GTGTCTTAAC...AGGAAGCTCC:W6(V451_D-1)
Want to move edge Edge(522->523,w:10.0)(C:W-1(V522_D-1)->C:W-1(V523_D-1)) to (GTGTCTTAAC...AGGAAGCTCC:W6(V451_D-1)->C:W-1(V523_D-1)
	adding edge: GTGTCTTAAC...AGGAAGCTCC:W6(V451_D-1) to C:W-1(V523_D-1)
removing edge Edge(522->523,w:10.0)(C:W-1(V522_D-1)->C:W-1(V523_D-1))
removing edge Edge(451->522,w:10.0)(GTGTCTTAAC...AGGAAGCTCC:W6(V451_D-1)->C:W-1(V522_D-1))
Found potential edge: Edge(451->523,w:10.0) between GTGTCTTAAC...AGGAAGCTCC:W6(V451_D-1) and C:W-1(V523_D-1)
removing vertex C:W-1(V523_D-1) was concatenated into GTGTCTTAAC...GGAAGCTCCC:W6(V451_D-1)
Want to move edge Edge(523->524,w:10.0)(C:W-1(V523_D-1)->T:W-1(V524_D-1)) to (GTGTCTTAAC...GGAAGCTCCC:W6(V451_D-1)->T:W-1(V524_D-1)
	adding edge: GTGTCTTAAC...GGAAGCTCCC:W6(V451_D-1) to T:W-1(V524_D-1)
removing edge Edge(523->524,w:10.0)(C:W-1(V523_D-1)->T:W-1(V524_D-1))
removing edge Edge(451->523,w:10.0)(GTGTCTTAAC...GGAAGCTCCC:W6(V451_D-1)->C:W-1(V523_D-1))
Found potential edge: Edge(451->524,w:10.0) between GTGTCTTAAC...GGAAGCTCCC:W6(V451_D-1) and T:W-1(V524_D-1)
removing vertex T:W-1(V524_D-1) was concatenated into GTGTCTTAAC...GAAGCTCCCT:W6(V451_D-1)
Want to move edge Edge(524->525,w:8.0)(T:W-1(V524_D-1)->G:W-1(V525_D-1)) to (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D-1)->G:W-1(V525_D-1)
	adding edge: GTGTCTTAAC...GAAGCTCCCT:W6(V451_D-1) to G:W-1(V525_D-1)
Want to move edge Edge(524->813,w:2.0)(T:W-1(V524_D-1)->C:W-1(V813_D-1)) to (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D-1)->C:W-1(V813_D-1)
	adding edge: GTGTCTTAAC...GAAGCTCCCT:W6(V451_D-1) to C:W-1(V813_D-1)
removing edge Edge(524->525,w:8.0)(T:W-1(V524_D-1)->G:W-1(V525_D-1))
removing edge Edge(524->813,w:2.0)(T:W-1(V524_D-1)->C:W-1(V813_D-1))
removing edge Edge(451->524,w:10.0)(GTGTCTTAAC...GAAGCTCCCT:W6(V451_D-1)->T:W-1(V524_D-1))
Found potential edge: Edge(525->526,w:6.0) between G:W-1(V525_D-1) and A:W-1(V526_D-1)
removing vertex A:W-1(V526_D-1) was concatenated into GA:W6(V525_D-1)
Want to move edge Edge(526->527,w:6.0)(A:W-1(V526_D-1)->G:W-1(V527_D-1)) to (GA:W6(V525_D-1)->G:W-1(V527_D-1)
	adding edge: GA:W6(V525_D-1) to G:W-1(V527_D-1)
removing edge Edge(526->527,w:6.0)(A:W-1(V526_D-1)->G:W-1(V527_D-1))
removing edge Edge(525->526,w:6.0)(GA:W6(V525_D-1)->A:W-1(V526_D-1))
Found potential edge: Edge(525->527,w:6.0) between GA:W6(V525_D-1) and G:W-1(V527_D-1)
removing vertex G:W-1(V527_D-1) was concatenated into GAG:W6(V525_D-1)
Want to move edge Edge(527->528,w:6.0)(G:W-1(V527_D-1)->C:W-1(V528_D-1)) to (GAG:W6(V525_D-1)->C:W-1(V528_D-1)
	adding edge: GAG:W6(V525_D-1) to C:W-1(V528_D-1)
removing edge Edge(527->528,w:6.0)(G:W-1(V527_D-1)->C:W-1(V528_D-1))
removing edge Edge(525->527,w:6.0)(GAG:W6(V525_D-1)->G:W-1(V527_D-1))
Found potential edge: Edge(525->528,w:6.0) between GAG:W6(V525_D-1) and C:W-1(V528_D-1)
removing vertex C:W-1(V528_D-1) was concatenated into GAGC:W6(V525_D-1)
Want to move edge Edge(528->529,w:6.0)(C:W-1(V528_D-1)->A:W-1(V529_D-1)) to (GAGC:W6(V525_D-1)->A:W-1(V529_D-1)
	adding edge: GAGC:W6(V525_D-1) to A:W-1(V529_D-1)
removing edge Edge(528->529,w:6.0)(C:W-1(V528_D-1)->A:W-1(V529_D-1))
removing edge Edge(525->528,w:6.0)(GAGC:W6(V525_D-1)->C:W-1(V528_D-1))
Found potential edge: Edge(525->529,w:6.0) between GAGC:W6(V525_D-1) and A:W-1(V529_D-1)
removing vertex A:W-1(V529_D-1) was concatenated into GAGCA:W6(V525_D-1)
Want to move edge Edge(529->530,w:6.0)(A:W-1(V529_D-1)->C:W-1(V530_D-1)) to (GAGCA:W6(V525_D-1)->C:W-1(V530_D-1)
	adding edge: GAGCA:W6(V525_D-1) to C:W-1(V530_D-1)
removing edge Edge(529->530,w:6.0)(A:W-1(V529_D-1)->C:W-1(V530_D-1))
removing edge Edge(525->529,w:6.0)(GAGCA:W6(V525_D-1)->A:W-1(V529_D-1))
Found potential edge: Edge(525->530,w:6.0) between GAGCA:W6(V525_D-1) and C:W-1(V530_D-1)
removing vertex C:W-1(V530_D-1) was concatenated into GAGCAC:W6(V525_D-1)
Want to move edge Edge(530->531,w:6.0)(C:W-1(V530_D-1)->T:W-1(V531_D-1)) to (GAGCAC:W6(V525_D-1)->T:W-1(V531_D-1)
	adding edge: GAGCAC:W6(V525_D-1) to T:W-1(V531_D-1)
removing edge Edge(530->531,w:6.0)(C:W-1(V530_D-1)->T:W-1(V531_D-1))
removing edge Edge(525->530,w:6.0)(GAGCAC:W6(V525_D-1)->C:W-1(V530_D-1))
Found potential edge: Edge(525->531,w:6.0) between GAGCAC:W6(V525_D-1) and T:W-1(V531_D-1)
removing vertex T:W-1(V531_D-1) was concatenated into GAGCACT:W6(V525_D-1)
Want to move edge Edge(531->532,w:6.0)(T:W-1(V531_D-1)->C:W-1(V532_D-1)) to (GAGCACT:W6(V525_D-1)->C:W-1(V532_D-1)
	adding edge: GAGCACT:W6(V525_D-1) to C:W-1(V532_D-1)
removing edge Edge(531->532,w:6.0)(T:W-1(V531_D-1)->C:W-1(V532_D-1))
removing edge Edge(525->531,w:6.0)(GAGCACT:W6(V525_D-1)->T:W-1(V531_D-1))
Found potential edge: Edge(525->532,w:6.0) between GAGCACT:W6(V525_D-1) and C:W-1(V532_D-1)
removing vertex C:W-1(V532_D-1) was concatenated into GAGCACTC:W6(V525_D-1)
Want to move edge Edge(532->533,w:6.0)(C:W-1(V532_D-1)->T:W-1(V533_D-1)) to (GAGCACTC:W6(V525_D-1)->T:W-1(V533_D-1)
	adding edge: GAGCACTC:W6(V525_D-1) to T:W-1(V533_D-1)
removing edge Edge(532->533,w:6.0)(C:W-1(V532_D-1)->T:W-1(V533_D-1))
removing edge Edge(525->532,w:6.0)(GAGCACTC:W6(V525_D-1)->C:W-1(V532_D-1))
Found potential edge: Edge(525->533,w:6.0) between GAGCACTC:W6(V525_D-1) and T:W-1(V533_D-1)
removing vertex T:W-1(V533_D-1) was concatenated into GAGCACTCT:W6(V525_D-1)
Want to move edge Edge(533->534,w:6.0)(T:W-1(V533_D-1)->G:W-1(V534_D-1)) to (GAGCACTCT:W6(V525_D-1)->G:W-1(V534_D-1)
	adding edge: GAGCACTCT:W6(V525_D-1) to G:W-1(V534_D-1)
removing edge Edge(533->534,w:6.0)(T:W-1(V533_D-1)->G:W-1(V534_D-1))
removing edge Edge(525->533,w:6.0)(GAGCACTCT:W6(V525_D-1)->T:W-1(V533_D-1))
Found potential edge: Edge(525->534,w:6.0) between GAGCACTCT:W6(V525_D-1) and G:W-1(V534_D-1)
removing vertex G:W-1(V534_D-1) was concatenated into GAGCACTCTG:W6(V525_D-1)
Want to move edge Edge(534->535,w:6.0)(G:W-1(V534_D-1)->A:W-1(V535_D-1)) to (GAGCACTCTG:W6(V525_D-1)->A:W-1(V535_D-1)
	adding edge: GAGCACTCTG:W6(V525_D-1) to A:W-1(V535_D-1)
removing edge Edge(534->535,w:6.0)(G:W-1(V534_D-1)->A:W-1(V535_D-1))
removing edge Edge(525->534,w:6.0)(GAGCACTCTG:W6(V525_D-1)->G:W-1(V534_D-1))
Found potential edge: Edge(525->535,w:6.0) between GAGCACTCTG:W6(V525_D-1) and A:W-1(V535_D-1)
removing vertex A:W-1(V535_D-1) was concatenated into GAGCACTCTGA:W6(V525_D-1)
Want to move edge Edge(535->536,w:6.0)(A:W-1(V535_D-1)->A:W-1(V536_D-1)) to (GAGCACTCTGA:W6(V525_D-1)->A:W-1(V536_D-1)
	adding edge: GAGCACTCTGA:W6(V525_D-1) to A:W-1(V536_D-1)
removing edge Edge(535->536,w:6.0)(A:W-1(V535_D-1)->A:W-1(V536_D-1))
removing edge Edge(525->535,w:6.0)(GAGCACTCTGA:W6(V525_D-1)->A:W-1(V535_D-1))
Found potential edge: Edge(525->536,w:6.0) between GAGCACTCTGA:W6(V525_D-1) and A:W-1(V536_D-1)
removing vertex A:W-1(V536_D-1) was concatenated into GAGCACTCTGAA:W6(V525_D-1)
Want to move edge Edge(536->537,w:6.0)(A:W-1(V536_D-1)->C:W-1(V537_D-1)) to (GAGCACTCTGAA:W6(V525_D-1)->C:W-1(V537_D-1)
	adding edge: GAGCACTCTGAA:W6(V525_D-1) to C:W-1(V537_D-1)
removing edge Edge(536->537,w:6.0)(A:W-1(V536_D-1)->C:W-1(V537_D-1))
removing edge Edge(525->536,w:6.0)(GAGCACTCTGAA:W6(V525_D-1)->A:W-1(V536_D-1))
Found potential edge: Edge(525->537,w:6.0) between GAGCACTCTGAA:W6(V525_D-1) and C:W-1(V537_D-1)
removing vertex C:W-1(V537_D-1) was concatenated into GAGCACTCTGAAC:W6(V525_D-1)
Want to move edge Edge(537->538,w:4.0)(C:W-1(V537_D-1)->C:W-1(V538_D-1)) to (GAGCACTCTGAAC:W6(V525_D-1)->C:W-1(V538_D-1)
	adding edge: GAGCACTCTGAAC:W6(V525_D-1) to C:W-1(V538_D-1)
removing edge Edge(537->538,w:4.0)(C:W-1(V537_D-1)->C:W-1(V538_D-1))
removing edge Edge(525->537,w:6.0)(GAGCACTCTGAAC:W6(V525_D-1)->C:W-1(V537_D-1))
Found potential edge: Edge(525->538,w:4.0) between GAGCACTCTGAAC:W6(V525_D-1) and C:W-1(V538_D-1)
removing vertex C:W-1(V538_D-1) was concatenated into GAGCACTCTGAACC:W6(V525_D-1)
Want to move edge Edge(538->539,w:6.0)(C:W-1(V538_D-1)->C:W-1(V539_D-1)) to (GAGCACTCTGAACC:W6(V525_D-1)->C:W-1(V539_D-1)
	adding edge: GAGCACTCTGAACC:W6(V525_D-1) to C:W-1(V539_D-1)
removing edge Edge(538->539,w:6.0)(C:W-1(V538_D-1)->C:W-1(V539_D-1))
removing edge Edge(525->538,w:4.0)(GAGCACTCTGAACC:W6(V525_D-1)->C:W-1(V538_D-1))
Found potential edge: Edge(525->539,w:6.0) between GAGCACTCTGAACC:W6(V525_D-1) and C:W-1(V539_D-1)
removing vertex C:W-1(V539_D-1) was concatenated into GAGCACTCTGAACCC:W6(V525_D-1)
Want to move edge Edge(539->540,w:6.0)(C:W-1(V539_D-1)->T:W-1(V540_D-1)) to (GAGCACTCTGAACCC:W6(V525_D-1)->T:W-1(V540_D-1)
	adding edge: GAGCACTCTGAACCC:W6(V525_D-1) to T:W-1(V540_D-1)
removing edge Edge(539->540,w:6.0)(C:W-1(V539_D-1)->T:W-1(V540_D-1))
removing edge Edge(525->539,w:6.0)(GAGCACTCTGAACCC:W6(V525_D-1)->C:W-1(V539_D-1))
Found potential edge: Edge(525->540,w:6.0) between GAGCACTCTGAACCC:W6(V525_D-1) and T:W-1(V540_D-1)
removing vertex T:W-1(V540_D-1) was concatenated into GAGCACTCTGAACCCT:W6(V525_D-1)
Want to move edge Edge(540->541,w:6.0)(T:W-1(V540_D-1)->G:W-1(V541_D-1)) to (GAGCACTCTGAACCCT:W6(V525_D-1)->G:W-1(V541_D-1)
	adding edge: GAGCACTCTGAACCCT:W6(V525_D-1) to G:W-1(V541_D-1)
removing edge Edge(540->541,w:6.0)(T:W-1(V540_D-1)->G:W-1(V541_D-1))
removing edge Edge(525->540,w:6.0)(GAGCACTCTGAACCCT:W6(V525_D-1)->T:W-1(V540_D-1))
Found potential edge: Edge(525->541,w:6.0) between GAGCACTCTGAACCCT:W6(V525_D-1) and G:W-1(V541_D-1)
removing vertex G:W-1(V541_D-1) was concatenated into GAGCACTCTGAACCCTG:W6(V525_D-1)
Want to move edge Edge(541->542,w:6.0)(G:W-1(V541_D-1)->T:W-1(V542_D-1)) to (GAGCACTCTGAACCCTG:W6(V525_D-1)->T:W-1(V542_D-1)
	adding edge: GAGCACTCTGAACCCTG:W6(V525_D-1) to T:W-1(V542_D-1)
removing edge Edge(541->542,w:6.0)(G:W-1(V541_D-1)->T:W-1(V542_D-1))
removing edge Edge(525->541,w:6.0)(GAGCACTCTGAACCCTG:W6(V525_D-1)->G:W-1(V541_D-1))
Found potential edge: Edge(525->542,w:6.0) between GAGCACTCTGAACCCTG:W6(V525_D-1) and T:W-1(V542_D-1)
removing vertex T:W-1(V542_D-1) was concatenated into GAGCACTCTGAACCCTGT:W6(V525_D-1)
Want to move edge Edge(542->543,w:6.0)(T:W-1(V542_D-1)->G:W-1(V543_D-1)) to (GAGCACTCTGAACCCTGT:W6(V525_D-1)->G:W-1(V543_D-1)
	adding edge: GAGCACTCTGAACCCTGT:W6(V525_D-1) to G:W-1(V543_D-1)
removing edge Edge(542->543,w:6.0)(T:W-1(V542_D-1)->G:W-1(V543_D-1))
removing edge Edge(525->542,w:6.0)(GAGCACTCTGAACCCTGT:W6(V525_D-1)->T:W-1(V542_D-1))
Found potential edge: Edge(525->543,w:6.0) between GAGCACTCTGAACCCTGT:W6(V525_D-1) and G:W-1(V543_D-1)
removing vertex G:W-1(V543_D-1) was concatenated into GAGCACTCTGAACCCTGTG:W6(V525_D-1)
Want to move edge Edge(543->544,w:6.0)(G:W-1(V543_D-1)->A:W-1(V544_D-1)) to (GAGCACTCTGAACCCTGTG:W6(V525_D-1)->A:W-1(V544_D-1)
	adding edge: GAGCACTCTGAACCCTGTG:W6(V525_D-1) to A:W-1(V544_D-1)
removing edge Edge(543->544,w:6.0)(G:W-1(V543_D-1)->A:W-1(V544_D-1))
removing edge Edge(525->543,w:6.0)(GAGCACTCTGAACCCTGTG:W6(V525_D-1)->G:W-1(V543_D-1))
Found potential edge: Edge(525->544,w:6.0) between GAGCACTCTGAACCCTGTG:W6(V525_D-1) and A:W-1(V544_D-1)
removing vertex A:W-1(V544_D-1) was concatenated into GAGCACTCTGAACCCTGTGA:W6(V525_D-1)
Want to move edge Edge(544->545,w:6.0)(A:W-1(V544_D-1)->G:W-1(V545_D-1)) to (GAGCACTCTGAACCCTGTGA:W6(V525_D-1)->G:W-1(V545_D-1)
	adding edge: GAGCACTCTGAACCCTGTGA:W6(V525_D-1) to G:W-1(V545_D-1)
removing edge Edge(544->545,w:6.0)(A:W-1(V544_D-1)->G:W-1(V545_D-1))
removing edge Edge(525->544,w:6.0)(GAGCACTCTGAACCCTGTGA:W6(V525_D-1)->A:W-1(V544_D-1))
Found potential edge: Edge(525->545,w:6.0) between GAGCACTCTGAACCCTGTGA:W6(V525_D-1) and G:W-1(V545_D-1)
removing vertex G:W-1(V545_D-1) was concatenated into GAGCACTCTGAACCCTGTGAG:W6(V525_D-1)
Want to move edge Edge(545->546,w:6.0)(G:W-1(V545_D-1)->G:W-1(V546_D-1)) to (GAGCACTCTGAACCCTGTGAG:W6(V525_D-1)->G:W-1(V546_D-1)
	adding edge: GAGCACTCTGAACCCTGTGAG:W6(V525_D-1) to G:W-1(V546_D-1)
removing edge Edge(545->546,w:6.0)(G:W-1(V545_D-1)->G:W-1(V546_D-1))
removing edge Edge(525->545,w:6.0)(GAGCACTCTGAACCCTGTGAG:W6(V525_D-1)->G:W-1(V545_D-1))
Found potential edge: Edge(525->546,w:6.0) between GAGCACTCTGAACCCTGTGAG:W6(V525_D-1) and G:W-1(V546_D-1)
removing vertex G:W-1(V546_D-1) was concatenated into GAGCACTCTGAACCCTGTGAGG:W6(V525_D-1)
Want to move edge Edge(546->547,w:6.0)(G:W-1(V546_D-1)->C:W-1(V547_D-1)) to (GAGCACTCTGAACCCTGTGAGG:W6(V525_D-1)->C:W-1(V547_D-1)
	adding edge: GAGCACTCTGAACCCTGTGAGG:W6(V525_D-1) to C:W-1(V547_D-1)
removing edge Edge(546->547,w:6.0)(G:W-1(V546_D-1)->C:W-1(V547_D-1))
removing edge Edge(525->546,w:6.0)(GAGCACTCTGAACCCTGTGAGG:W6(V525_D-1)->G:W-1(V546_D-1))
Found potential edge: Edge(525->547,w:6.0) between GAGCACTCTGAACCCTGTGAGG:W6(V525_D-1) and C:W-1(V547_D-1)
removing vertex C:W-1(V547_D-1) was concatenated into GAGCACTCTGAACCCTGTGAGGC:W6(V525_D-1)
Want to move edge Edge(547->548,w:6.0)(C:W-1(V547_D-1)->A:W-1(V548_D-1)) to (GAGCACTCTGAACCCTGTGAGGC:W6(V525_D-1)->A:W-1(V548_D-1)
	adding edge: GAGCACTCTGAACCCTGTGAGGC:W6(V525_D-1) to A:W-1(V548_D-1)
removing edge Edge(547->548,w:6.0)(C:W-1(V547_D-1)->A:W-1(V548_D-1))
removing edge Edge(525->547,w:6.0)(GAGCACTCTGAACCCTGTGAGGC:W6(V525_D-1)->C:W-1(V547_D-1))
Found potential edge: Edge(525->548,w:6.0) between GAGCACTCTGAACCCTGTGAGGC:W6(V525_D-1) and A:W-1(V548_D-1)
removing vertex A:W-1(V548_D-1) was concatenated into GAGCACTCTGAACCCTGTGAGGCA:W6(V525_D-1)
Want to move edge Edge(548->549,w:6.0)(A:W-1(V548_D-1)->A:W-1(V549_D-1)) to (GAGCACTCTGAACCCTGTGAGGCA:W6(V525_D-1)->A:W-1(V549_D-1)
	adding edge: GAGCACTCTGAACCCTGTGAGGCA:W6(V525_D-1) to A:W-1(V549_D-1)
removing edge Edge(548->549,w:6.0)(A:W-1(V548_D-1)->A:W-1(V549_D-1))
removing edge Edge(525->548,w:6.0)(GAGCACTCTGAACCCTGTGAGGCA:W6(V525_D-1)->A:W-1(V548_D-1))
Found potential edge: Edge(549->550,w:8.0) between A:W-1(V549_D-1) and G:W-1(V550_D-1)
removing vertex G:W-1(V550_D-1) was concatenated into AG:W8(V549_D-1)
Want to move edge Edge(550->551,w:8.0)(G:W-1(V550_D-1)->T:W-1(V551_D-1)) to (AG:W8(V549_D-1)->T:W-1(V551_D-1)
	adding edge: AG:W8(V549_D-1) to T:W-1(V551_D-1)
removing edge Edge(550->551,w:8.0)(G:W-1(V550_D-1)->T:W-1(V551_D-1))
removing edge Edge(549->550,w:8.0)(AG:W8(V549_D-1)->G:W-1(V550_D-1))
Found potential edge: Edge(549->551,w:8.0) between AG:W8(V549_D-1) and T:W-1(V551_D-1)
removing vertex T:W-1(V551_D-1) was concatenated into AGT:W8(V549_D-1)
Want to move edge Edge(551->552,w:8.0)(T:W-1(V551_D-1)->C:W-1(V552_D-1)) to (AGT:W8(V549_D-1)->C:W-1(V552_D-1)
	adding edge: AGT:W8(V549_D-1) to C:W-1(V552_D-1)
removing edge Edge(551->552,w:8.0)(T:W-1(V551_D-1)->C:W-1(V552_D-1))
removing edge Edge(549->551,w:8.0)(AGT:W8(V549_D-1)->T:W-1(V551_D-1))
Found potential edge: Edge(549->552,w:8.0) between AGT:W8(V549_D-1) and C:W-1(V552_D-1)
removing vertex C:W-1(V552_D-1) was concatenated into AGTC:W8(V549_D-1)
Want to move edge Edge(552->553,w:8.0)(C:W-1(V552_D-1)->C:W-1(V553_D-1)) to (AGTC:W8(V549_D-1)->C:W-1(V553_D-1)
	adding edge: AGTC:W8(V549_D-1) to C:W-1(V553_D-1)
removing edge Edge(552->553,w:8.0)(C:W-1(V552_D-1)->C:W-1(V553_D-1))
removing edge Edge(549->552,w:8.0)(AGTC:W8(V549_D-1)->C:W-1(V552_D-1))
Found potential edge: Edge(549->553,w:8.0) between AGTC:W8(V549_D-1) and C:W-1(V553_D-1)
removing vertex C:W-1(V553_D-1) was concatenated into AGTCC:W8(V549_D-1)
Want to move edge Edge(553->554,w:8.0)(C:W-1(V553_D-1)->A:W-1(V554_D-1)) to (AGTCC:W8(V549_D-1)->A:W-1(V554_D-1)
	adding edge: AGTCC:W8(V549_D-1) to A:W-1(V554_D-1)
removing edge Edge(553->554,w:8.0)(C:W-1(V553_D-1)->A:W-1(V554_D-1))
removing edge Edge(549->553,w:8.0)(AGTCC:W8(V549_D-1)->C:W-1(V553_D-1))
Found potential edge: Edge(549->554,w:8.0) between AGTCC:W8(V549_D-1) and A:W-1(V554_D-1)
removing vertex A:W-1(V554_D-1) was concatenated into AGTCCA:W8(V549_D-1)
Want to move edge Edge(554->555,w:6.0)(A:W-1(V554_D-1)->C:W-1(V555_D-1)) to (AGTCCA:W8(V549_D-1)->C:W-1(V555_D-1)
	adding edge: AGTCCA:W8(V549_D-1) to C:W-1(V555_D-1)
removing edge Edge(554->555,w:6.0)(A:W-1(V554_D-1)->C:W-1(V555_D-1))
removing edge Edge(549->554,w:8.0)(AGTCCA:W8(V549_D-1)->A:W-1(V554_D-1))
Found potential edge: Edge(549->555,w:6.0) between AGTCCA:W8(V549_D-1) and C:W-1(V555_D-1)
removing vertex C:W-1(V555_D-1) was concatenated into AGTCCAC:W8(V549_D-1)
Want to move edge Edge(555->556,w:6.0)(C:W-1(V555_D-1)->C:W-1(V556_D-1)) to (AGTCCAC:W8(V549_D-1)->C:W-1(V556_D-1)
	adding edge: AGTCCAC:W8(V549_D-1) to C:W-1(V556_D-1)
removing edge Edge(555->556,w:6.0)(C:W-1(V555_D-1)->C:W-1(V556_D-1))
removing edge Edge(549->555,w:6.0)(AGTCCAC:W8(V549_D-1)->C:W-1(V555_D-1))
Found potential edge: Edge(549->556,w:6.0) between AGTCCAC:W8(V549_D-1) and C:W-1(V556_D-1)
removing vertex C:W-1(V556_D-1) was concatenated into AGTCCACC:W7(V549_D-1)
Want to move edge Edge(556->557,w:4.0)(C:W-1(V556_D-1)->A:W-1(V557_D-1)) to (AGTCCACC:W7(V549_D-1)->A:W-1(V557_D-1)
	adding edge: AGTCCACC:W7(V549_D-1) to A:W-1(V557_D-1)
removing edge Edge(556->557,w:4.0)(C:W-1(V556_D-1)->A:W-1(V557_D-1))
removing edge Edge(549->556,w:6.0)(AGTCCACC:W7(V549_D-1)->C:W-1(V556_D-1))
Found potential edge: Edge(549->557,w:4.0) between AGTCCACC:W7(V549_D-1) and A:W-1(V557_D-1)
removing vertex A:W-1(V557_D-1) was concatenated into AGTCCACCA:W7(V549_D-1)
Want to move edge Edge(557->558,w:4.0)(A:W-1(V557_D-1)->C:W-1(V558_D-1)) to (AGTCCACCA:W7(V549_D-1)->C:W-1(V558_D-1)
	adding edge: AGTCCACCA:W7(V549_D-1) to C:W-1(V558_D-1)
removing edge Edge(557->558,w:4.0)(A:W-1(V557_D-1)->C:W-1(V558_D-1))
removing edge Edge(549->557,w:4.0)(AGTCCACCA:W7(V549_D-1)->A:W-1(V557_D-1))
Found potential edge: Edge(549->558,w:4.0) between AGTCCACCA:W7(V549_D-1) and C:W-1(V558_D-1)
removing vertex C:W-1(V558_D-1) was concatenated into AGTCCACCAC:W7(V549_D-1)
Want to move edge Edge(558->559,w:4.0)(C:W-1(V558_D-1)->C:W-1(V559_D-1)) to (AGTCCACCAC:W7(V549_D-1)->C:W-1(V559_D-1)
	adding edge: AGTCCACCAC:W7(V549_D-1) to C:W-1(V559_D-1)
removing edge Edge(558->559,w:4.0)(C:W-1(V558_D-1)->C:W-1(V559_D-1))
removing edge Edge(549->558,w:4.0)(AGTCCACCAC:W7(V549_D-1)->C:W-1(V558_D-1))
Found potential edge: Edge(549->559,w:4.0) between AGTCCACCAC:W7(V549_D-1) and C:W-1(V559_D-1)
removing vertex C:W-1(V559_D-1) was concatenated into AGTCCACCACC:W6(V549_D-1)
Want to move edge Edge(559->560,w:2.0)(C:W-1(V559_D-1)->A:W-1(V560_D-1)) to (AGTCCACCACC:W6(V549_D-1)->A:W-1(V560_D-1)
	adding edge: AGTCCACCACC:W6(V549_D-1) to A:W-1(V560_D-1)
removing edge Edge(559->560,w:2.0)(C:W-1(V559_D-1)->A:W-1(V560_D-1))
removing edge Edge(549->559,w:4.0)(AGTCCACCACC:W6(V549_D-1)->C:W-1(V559_D-1))
Found potential edge: Edge(549->560,w:2.0) between AGTCCACCACC:W6(V549_D-1) and A:W-1(V560_D-1)
removing vertex A:W-1(V560_D-1) was concatenated into AGTCCACCACCA:W6(V549_D-1)
Want to move edge Edge(560->561,w:2.0)(A:W-1(V560_D-1)->G:W-1(V561_D-1)) to (AGTCCACCACCA:W6(V549_D-1)->G:W-1(V561_D-1)
	adding edge: AGTCCACCACCA:W6(V549_D-1) to G:W-1(V561_D-1)
removing edge Edge(560->561,w:2.0)(A:W-1(V560_D-1)->G:W-1(V561_D-1))
removing edge Edge(549->560,w:2.0)(AGTCCACCACCA:W6(V549_D-1)->A:W-1(V560_D-1))
Found potential edge: Edge(549->561,w:2.0) between AGTCCACCACCA:W6(V549_D-1) and G:W-1(V561_D-1)
removing vertex G:W-1(V561_D-1) was concatenated into AGTCCACCACCAG:W6(V549_D-1)
Want to move edge Edge(561->562,w:2.0)(G:W-1(V561_D-1)->C:W-1(V562_D-1)) to (AGTCCACCACCAG:W6(V549_D-1)->C:W-1(V562_D-1)
	adding edge: AGTCCACCACCAG:W6(V549_D-1) to C:W-1(V562_D-1)
removing edge Edge(561->562,w:2.0)(G:W-1(V561_D-1)->C:W-1(V562_D-1))
removing edge Edge(549->561,w:2.0)(AGTCCACCACCAG:W6(V549_D-1)->G:W-1(V561_D-1))
Found potential edge: Edge(549->562,w:2.0) between AGTCCACCACCAG:W6(V549_D-1) and C:W-1(V562_D-1)
removing vertex C:W-1(V562_D-1) was concatenated into AGTCCACCACCAGC:W5(V549_D-1)
Want to move edge Edge(562->563,w:2.0)(C:W-1(V562_D-1)->G:W-1(V563_D-1)) to (AGTCCACCACCAGC:W5(V549_D-1)->G:W-1(V563_D-1)
	adding edge: AGTCCACCACCAGC:W5(V549_D-1) to G:W-1(V563_D-1)
removing edge Edge(562->563,w:2.0)(C:W-1(V562_D-1)->G:W-1(V563_D-1))
removing edge Edge(549->562,w:2.0)(AGTCCACCACCAGC:W5(V549_D-1)->C:W-1(V562_D-1))
Found potential edge: Edge(549->563,w:2.0) between AGTCCACCACCAGC:W5(V549_D-1) and G:W-1(V563_D-1)
removing vertex G:W-1(V563_D-1) was concatenated into AGTCCACCACCAGCG:W5(V549_D-1)
Want to move edge Edge(563->564,w:2.0)(G:W-1(V563_D-1)->T:W-1(V564_D-1)) to (AGTCCACCACCAGCG:W5(V549_D-1)->T:W-1(V564_D-1)
	adding edge: AGTCCACCACCAGCG:W5(V549_D-1) to T:W-1(V564_D-1)
removing edge Edge(563->564,w:2.0)(G:W-1(V563_D-1)->T:W-1(V564_D-1))
removing edge Edge(549->563,w:2.0)(AGTCCACCACCAGCG:W5(V549_D-1)->G:W-1(V563_D-1))
Found potential edge: Edge(549->564,w:2.0) between AGTCCACCACCAGCG:W5(V549_D-1) and T:W-1(V564_D-1)
removing vertex T:W-1(V564_D-1) was concatenated into AGTCCACCACCAGCGT:W5(V549_D-1)
Want to move edge Edge(564->565,w:2.0)(T:W-1(V564_D-1)->A:W-1(V565_D-1)) to (AGTCCACCACCAGCGT:W5(V549_D-1)->A:W-1(V565_D-1)
	adding edge: AGTCCACCACCAGCGT:W5(V549_D-1) to A:W-1(V565_D-1)
removing edge Edge(564->565,w:2.0)(T:W-1(V564_D-1)->A:W-1(V565_D-1))
removing edge Edge(549->564,w:2.0)(AGTCCACCACCAGCGT:W5(V549_D-1)->T:W-1(V564_D-1))
Found potential edge: Edge(549->565,w:2.0) between AGTCCACCACCAGCGT:W5(V549_D-1) and A:W-1(V565_D-1)
removing vertex A:W-1(V565_D-1) was concatenated into AGTCCACCACCAGCGTA:W5(V549_D-1)
Want to move edge Edge(565->566,w:2.0)(A:W-1(V565_D-1)->T:W-1(V566_D-1)) to (AGTCCACCACCAGCGTA:W5(V549_D-1)->T:W-1(V566_D-1)
	adding edge: AGTCCACCACCAGCGTA:W5(V549_D-1) to T:W-1(V566_D-1)
removing edge Edge(565->566,w:2.0)(A:W-1(V565_D-1)->T:W-1(V566_D-1))
removing edge Edge(549->565,w:2.0)(AGTCCACCACCAGCGTA:W5(V549_D-1)->A:W-1(V565_D-1))
Found potential edge: Edge(549->566,w:2.0) between AGTCCACCACCAGCGTA:W5(V549_D-1) and T:W-1(V566_D-1)
removing vertex T:W-1(V566_D-1) was concatenated into AGTCCACCACCAGCGTAT:W5(V549_D-1)
Want to move edge Edge(566->567,w:2.0)(T:W-1(V566_D-1)->C:W-1(V567_D-1)) to (AGTCCACCACCAGCGTAT:W5(V549_D-1)->C:W-1(V567_D-1)
	adding edge: AGTCCACCACCAGCGTAT:W5(V549_D-1) to C:W-1(V567_D-1)
removing edge Edge(566->567,w:2.0)(T:W-1(V566_D-1)->C:W-1(V567_D-1))
removing edge Edge(549->566,w:2.0)(AGTCCACCACCAGCGTAT:W5(V549_D-1)->T:W-1(V566_D-1))
Found potential edge: Edge(549->567,w:2.0) between AGTCCACCACCAGCGTAT:W5(V549_D-1) and C:W-1(V567_D-1)
removing vertex C:W-1(V567_D-1) was concatenated into AGTCCACCACCAGCGTATC:W4(V549_D-1)
Want to move edge Edge(567->568,w:4.0)(C:W-1(V567_D-1)->T:W-1(V568_D-1)) to (AGTCCACCACCAGCGTATC:W4(V549_D-1)->T:W-1(V568_D-1)
	adding edge: AGTCCACCACCAGCGTATC:W4(V549_D-1) to T:W-1(V568_D-1)
removing edge Edge(567->568,w:4.0)(C:W-1(V567_D-1)->T:W-1(V568_D-1))
removing edge Edge(549->567,w:2.0)(AGTCCACCACCAGCGTATC:W4(V549_D-1)->C:W-1(V567_D-1))
Found potential edge: Edge(549->568,w:4.0) between AGTCCACCACCAGCGTATC:W4(V549_D-1) and T:W-1(V568_D-1)
removing vertex T:W-1(V568_D-1) was concatenated into AGTCCACCACCAGCGTATCT:W4(V549_D-1)
Want to move edge Edge(568->569,w:4.0)(T:W-1(V568_D-1)->A:W-1(V569_D-1)) to (AGTCCACCACCAGCGTATCT:W4(V549_D-1)->A:W-1(V569_D-1)
	adding edge: AGTCCACCACCAGCGTATCT:W4(V549_D-1) to A:W-1(V569_D-1)
removing edge Edge(568->569,w:4.0)(T:W-1(V568_D-1)->A:W-1(V569_D-1))
removing edge Edge(549->568,w:4.0)(AGTCCACCACCAGCGTATCT:W4(V549_D-1)->T:W-1(V568_D-1))
Found potential edge: Edge(549->569,w:4.0) between AGTCCACCACCAGCGTATCT:W4(V549_D-1) and A:W-1(V569_D-1)
removing vertex A:W-1(V569_D-1) was concatenated into AGTCCACCACCAGCGTATCTA:W4(V549_D-1)
Want to move edge Edge(569->570,w:4.0)(A:W-1(V569_D-1)->G:W-1(V570_D-1)) to (AGTCCACCACCAGCGTATCTA:W4(V549_D-1)->G:W-1(V570_D-1)
	adding edge: AGTCCACCACCAGCGTATCTA:W4(V549_D-1) to G:W-1(V570_D-1)
removing edge Edge(569->570,w:4.0)(A:W-1(V569_D-1)->G:W-1(V570_D-1))
removing edge Edge(549->569,w:4.0)(AGTCCACCACCAGCGTATCTA:W4(V549_D-1)->A:W-1(V569_D-1))
Found potential edge: Edge(549->570,w:4.0) between AGTCCACCACCAGCGTATCTA:W4(V549_D-1) and G:W-1(V570_D-1)
removing vertex G:W-1(V570_D-1) was concatenated into AGTCCACCACCAGCGTATCTAG:W4(V549_D-1)
Want to move edge Edge(570->571,w:4.0)(G:W-1(V570_D-1)->A:W-1(V571_D-1)) to (AGTCCACCACCAGCGTATCTAG:W4(V549_D-1)->A:W-1(V571_D-1)
	adding edge: AGTCCACCACCAGCGTATCTAG:W4(V549_D-1) to A:W-1(V571_D-1)
removing edge Edge(570->571,w:4.0)(G:W-1(V570_D-1)->A:W-1(V571_D-1))
removing edge Edge(549->570,w:4.0)(AGTCCACCACCAGCGTATCTAG:W4(V549_D-1)->G:W-1(V570_D-1))
Found potential edge: Edge(549->571,w:4.0) between AGTCCACCACCAGCGTATCTAG:W4(V549_D-1) and A:W-1(V571_D-1)
removing vertex A:W-1(V571_D-1) was concatenated into AGTCCACCACCAGCGTATCTAGA:W4(V549_D-1)
Want to move edge Edge(571->572,w:4.0)(A:W-1(V571_D-1)->C:W-1(V572_D-1)) to (AGTCCACCACCAGCGTATCTAGA:W4(V549_D-1)->C:W-1(V572_D-1)
	adding edge: AGTCCACCACCAGCGTATCTAGA:W4(V549_D-1) to C:W-1(V572_D-1)
removing edge Edge(571->572,w:4.0)(A:W-1(V571_D-1)->C:W-1(V572_D-1))
removing edge Edge(549->571,w:4.0)(AGTCCACCACCAGCGTATCTAGA:W4(V549_D-1)->A:W-1(V571_D-1))
Found potential edge: Edge(549->572,w:4.0) between AGTCCACCACCAGCGTATCTAGA:W4(V549_D-1) and C:W-1(V572_D-1)
removing vertex C:W-1(V572_D-1) was concatenated into AGTCCACCACCAGCGTATCTAGAC:W4(V549_D-1)
Want to move edge Edge(572->573,w:4.0)(C:W-1(V572_D-1)->C:W-1(V573_D-1)) to (AGTCCACCACCAGCGTATCTAGAC:W4(V549_D-1)->C:W-1(V573_D-1)
	adding edge: AGTCCACCACCAGCGTATCTAGAC:W4(V549_D-1) to C:W-1(V573_D-1)
removing edge Edge(572->573,w:4.0)(C:W-1(V572_D-1)->C:W-1(V573_D-1))
removing edge Edge(549->572,w:4.0)(AGTCCACCACCAGCGTATCTAGAC:W4(V549_D-1)->C:W-1(V572_D-1))
Found potential edge: Edge(549->573,w:4.0) between AGTCCACCACCAGCGTATCTAGAC:W4(V549_D-1) and C:W-1(V573_D-1)
removing vertex C:W-1(V573_D-1) was concatenated into AGTCCACCACCAGCGTATCTAGACC:W4(V549_D-1)
Want to move edge Edge(573->574,w:4.0)(C:W-1(V573_D-1)->C:W-1(V574_D-1)) to (AGTCCACCACCAGCGTATCTAGACC:W4(V549_D-1)->C:W-1(V574_D-1)
	adding edge: AGTCCACCACCAGCGTATCTAGACC:W4(V549_D-1) to C:W-1(V574_D-1)
removing edge Edge(573->574,w:4.0)(C:W-1(V573_D-1)->C:W-1(V574_D-1))
removing edge Edge(549->573,w:4.0)(AGTCCACCACCAGCGTATCTAGACC:W4(V549_D-1)->C:W-1(V573_D-1))
Found potential edge: Edge(549->574,w:4.0) between AGTCCACCACCAGCGTATCTAGACC:W4(V549_D-1) and C:W-1(V574_D-1)
removing vertex C:W-1(V574_D-1) was concatenated into AGTCCACCACCAGCGTATCTAGACCC:W4(V549_D-1)
Want to move edge Edge(574->575,w:4.0)(C:W-1(V574_D-1)->A:W-1(V575_D-1)) to (AGTCCACCACCAGCGTATCTAGACCC:W4(V549_D-1)->A:W-1(V575_D-1)
	adding edge: AGTCCACCACCAGCGTATCTAGACCC:W4(V549_D-1) to A:W-1(V575_D-1)
removing edge Edge(574->575,w:4.0)(C:W-1(V574_D-1)->A:W-1(V575_D-1))
removing edge Edge(549->574,w:4.0)(AGTCCACCACCAGCGTATCTAGACCC:W4(V549_D-1)->C:W-1(V574_D-1))
Found potential edge: Edge(549->575,w:4.0) between AGTCCACCACCAGCGTATCTAGACCC:W4(V549_D-1) and A:W-1(V575_D-1)
removing vertex A:W-1(V575_D-1) was concatenated into AGTCCACCACCAGCGTATCTAGACCCA:W4(V549_D-1)
Want to move edge Edge(575->576,w:4.0)(A:W-1(V575_D-1)->G:W-1(V576_D-1)) to (AGTCCACCACCAGCGTATCTAGACCCA:W4(V549_D-1)->G:W-1(V576_D-1)
	adding edge: AGTCCACCACCAGCGTATCTAGACCCA:W4(V549_D-1) to G:W-1(V576_D-1)
removing edge Edge(575->576,w:4.0)(A:W-1(V575_D-1)->G:W-1(V576_D-1))
removing edge Edge(549->575,w:4.0)(AGTCCACCACCAGCGTATCTAGACCCA:W4(V549_D-1)->A:W-1(V575_D-1))
Found potential edge: Edge(549->576,w:4.0) between AGTCCACCACCAGCGTATCTAGACCCA:W4(V549_D-1) and G:W-1(V576_D-1)
removing vertex G:W-1(V576_D-1) was concatenated into AGTCCACCACCAGCGTATCTAGACCCAG:W4(V549_D-1)
Want to move edge Edge(576->577,w:4.0)(G:W-1(V576_D-1)->G:W-1(V577_D-1)) to (AGTCCACCACCAGCGTATCTAGACCCAG:W4(V549_D-1)->G:W-1(V577_D-1)
	adding edge: AGTCCACCACCAGCGTATCTAGACCCAG:W4(V549_D-1) to G:W-1(V577_D-1)
removing edge Edge(576->577,w:4.0)(G:W-1(V576_D-1)->G:W-1(V577_D-1))
removing edge Edge(549->576,w:4.0)(AGTCCACCACCAGCGTATCTAGACCCAG:W4(V549_D-1)->G:W-1(V576_D-1))
Found potential edge: Edge(549->577,w:4.0) between AGTCCACCACCAGCGTATCTAGACCCAG:W4(V549_D-1) and G:W-1(V577_D-1)
removing vertex G:W-1(V577_D-1) was concatenated into AGTCCACCACCAGCGTATCTAGACCCAGG:W4(V549_D-1)
Want to move edge Edge(577->578,w:4.0)(G:W-1(V577_D-1)->C:W-1(V578_D-1)) to (AGTCCACCACCAGCGTATCTAGACCCAGG:W4(V549_D-1)->C:W-1(V578_D-1)
	adding edge: AGTCCACCACCAGCGTATCTAGACCCAGG:W4(V549_D-1) to C:W-1(V578_D-1)
removing edge Edge(577->578,w:4.0)(G:W-1(V577_D-1)->C:W-1(V578_D-1))
removing edge Edge(549->577,w:4.0)(AGTCCACCACCAGCGTATCTAGACCCAGG:W4(V549_D-1)->G:W-1(V577_D-1))
Found potential edge: Edge(549->578,w:4.0) between AGTCCACCACCAGCGTATCTAGACCCAGG:W4(V549_D-1) and C:W-1(V578_D-1)
removing vertex C:W-1(V578_D-1) was concatenated into AGTCCACCACCAGCGTATCTAGACCCAGGC:W4(V549_D-1)
Want to move edge Edge(578->579,w:4.0)(C:W-1(V578_D-1)->C:W-1(V579_D-1)) to (AGTCCACCACCAGCGTATCTAGACCCAGGC:W4(V549_D-1)->C:W-1(V579_D-1)
	adding edge: AGTCCACCACCAGCGTATCTAGACCCAGGC:W4(V549_D-1) to C:W-1(V579_D-1)
removing edge Edge(578->579,w:4.0)(C:W-1(V578_D-1)->C:W-1(V579_D-1))
removing edge Edge(549->578,w:4.0)(AGTCCACCACCAGCGTATCTAGACCCAGGC:W4(V549_D-1)->C:W-1(V578_D-1))
Found potential edge: Edge(549->579,w:4.0) between AGTCCACCACCAGCGTATCTAGACCCAGGC:W4(V549_D-1) and C:W-1(V579_D-1)
removing vertex C:W-1(V579_D-1) was concatenated into AGTCCACCAC...GACCCAGGCC:W4(V549_D-1)
Want to move edge Edge(579->580,w:4.0)(C:W-1(V579_D-1)->A:W-1(V580_D-1)) to (AGTCCACCAC...GACCCAGGCC:W4(V549_D-1)->A:W-1(V580_D-1)
	adding edge: AGTCCACCAC...GACCCAGGCC:W4(V549_D-1) to A:W-1(V580_D-1)
removing edge Edge(579->580,w:4.0)(C:W-1(V579_D-1)->A:W-1(V580_D-1))
removing edge Edge(549->579,w:4.0)(AGTCCACCAC...GACCCAGGCC:W4(V549_D-1)->C:W-1(V579_D-1))
Found potential edge: Edge(549->580,w:4.0) between AGTCCACCAC...GACCCAGGCC:W4(V549_D-1) and A:W-1(V580_D-1)
removing vertex A:W-1(V580_D-1) was concatenated into AGTCCACCAC...ACCCAGGCCA:W4(V549_D-1)
Want to move edge Edge(580->581,w:4.0)(A:W-1(V580_D-1)->T:W-1(V581_D-1)) to (AGTCCACCAC...ACCCAGGCCA:W4(V549_D-1)->T:W-1(V581_D-1)
	adding edge: AGTCCACCAC...ACCCAGGCCA:W4(V549_D-1) to T:W-1(V581_D-1)
removing edge Edge(580->581,w:4.0)(A:W-1(V580_D-1)->T:W-1(V581_D-1))
removing edge Edge(549->580,w:4.0)(AGTCCACCAC...ACCCAGGCCA:W4(V549_D-1)->A:W-1(V580_D-1))
Found potential edge: Edge(549->581,w:4.0) between AGTCCACCAC...ACCCAGGCCA:W4(V549_D-1) and T:W-1(V581_D-1)
removing vertex T:W-1(V581_D-1) was concatenated into AGTCCACCAC...CCCAGGCCAT:W4(V549_D-1)
Want to move edge Edge(581->582,w:4.0)(T:W-1(V581_D-1)->C:W-1(V582_D-1)) to (AGTCCACCAC...CCCAGGCCAT:W4(V549_D-1)->C:W-1(V582_D-1)
	adding edge: AGTCCACCAC...CCCAGGCCAT:W4(V549_D-1) to C:W-1(V582_D-1)
removing edge Edge(581->582,w:4.0)(T:W-1(V581_D-1)->C:W-1(V582_D-1))
removing edge Edge(549->581,w:4.0)(AGTCCACCAC...CCCAGGCCAT:W4(V549_D-1)->T:W-1(V581_D-1))
Found potential edge: Edge(549->582,w:4.0) between AGTCCACCAC...CCCAGGCCAT:W4(V549_D-1) and C:W-1(V582_D-1)
removing vertex C:W-1(V582_D-1) was concatenated into AGTCCACCAC...CCAGGCCATC:W4(V549_D-1)
Want to move edge Edge(582->583,w:4.0)(C:W-1(V582_D-1)->T:W-1(V583_D-1)) to (AGTCCACCAC...CCAGGCCATC:W4(V549_D-1)->T:W-1(V583_D-1)
	adding edge: AGTCCACCAC...CCAGGCCATC:W4(V549_D-1) to T:W-1(V583_D-1)
removing edge Edge(582->583,w:4.0)(C:W-1(V582_D-1)->T:W-1(V583_D-1))
removing edge Edge(549->582,w:4.0)(AGTCCACCAC...CCAGGCCATC:W4(V549_D-1)->C:W-1(V582_D-1))
Found potential edge: Edge(549->583,w:4.0) between AGTCCACCAC...CCAGGCCATC:W4(V549_D-1) and T:W-1(V583_D-1)
removing vertex T:W-1(V583_D-1) was concatenated into AGTCCACCAC...CAGGCCATCT:W4(V549_D-1)
Want to move edge Edge(583->584,w:4.0)(T:W-1(V583_D-1)->A:W-1(V584_D-1)) to (AGTCCACCAC...CAGGCCATCT:W4(V549_D-1)->A:W-1(V584_D-1)
	adding edge: AGTCCACCAC...CAGGCCATCT:W4(V549_D-1) to A:W-1(V584_D-1)
removing edge Edge(583->584,w:4.0)(T:W-1(V583_D-1)->A:W-1(V584_D-1))
removing edge Edge(549->583,w:4.0)(AGTCCACCAC...CAGGCCATCT:W4(V549_D-1)->T:W-1(V583_D-1))
Found potential edge: Edge(549->584,w:4.0) between AGTCCACCAC...CAGGCCATCT:W4(V549_D-1) and A:W-1(V584_D-1)
removing vertex A:W-1(V584_D-1) was concatenated into AGTCCACCAC...AGGCCATCTA:W4(V549_D-1)
Want to move edge Edge(584->585,w:4.0)(A:W-1(V584_D-1)->A:W-1(V585_D-1)) to (AGTCCACCAC...AGGCCATCTA:W4(V549_D-1)->A:W-1(V585_D-1)
	adding edge: AGTCCACCAC...AGGCCATCTA:W4(V549_D-1) to A:W-1(V585_D-1)
removing edge Edge(584->585,w:4.0)(A:W-1(V584_D-1)->A:W-1(V585_D-1))
removing edge Edge(549->584,w:4.0)(AGTCCACCAC...AGGCCATCTA:W4(V549_D-1)->A:W-1(V584_D-1))
Found potential edge: Edge(549->585,w:4.0) between AGTCCACCAC...AGGCCATCTA:W4(V549_D-1) and A:W-1(V585_D-1)
removing vertex A:W-1(V585_D-1) was concatenated into AGTCCACCAC...GGCCATCTAA:W4(V549_D-1)
Want to move edge Edge(585->586,w:4.0)(A:W-1(V585_D-1)->T:W-1(V586_D-1)) to (AGTCCACCAC...GGCCATCTAA:W4(V549_D-1)->T:W-1(V586_D-1)
	adding edge: AGTCCACCAC...GGCCATCTAA:W4(V549_D-1) to T:W-1(V586_D-1)
removing edge Edge(585->586,w:4.0)(A:W-1(V585_D-1)->T:W-1(V586_D-1))
removing edge Edge(549->585,w:4.0)(AGTCCACCAC...GGCCATCTAA:W4(V549_D-1)->A:W-1(V585_D-1))
Found potential edge: Edge(549->586,w:4.0) between AGTCCACCAC...GGCCATCTAA:W4(V549_D-1) and T:W-1(V586_D-1)
removing vertex T:W-1(V586_D-1) was concatenated into AGTCCACCAC...GCCATCTAAT:W4(V549_D-1)
Want to move edge Edge(586->587,w:4.0)(T:W-1(V586_D-1)->A:W-1(V587_D-1)) to (AGTCCACCAC...GCCATCTAAT:W4(V549_D-1)->A:W-1(V587_D-1)
	adding edge: AGTCCACCAC...GCCATCTAAT:W4(V549_D-1) to A:W-1(V587_D-1)
removing edge Edge(586->587,w:4.0)(T:W-1(V586_D-1)->A:W-1(V587_D-1))
removing edge Edge(549->586,w:4.0)(AGTCCACCAC...GCCATCTAAT:W4(V549_D-1)->T:W-1(V586_D-1))
Found potential edge: Edge(549->587,w:4.0) between AGTCCACCAC...GCCATCTAAT:W4(V549_D-1) and A:W-1(V587_D-1)
removing vertex A:W-1(V587_D-1) was concatenated into AGTCCACCAC...CCATCTAATA:W4(V549_D-1)
Want to move edge Edge(587->588,w:4.0)(A:W-1(V587_D-1)->A:W-1(V588_D-1)) to (AGTCCACCAC...CCATCTAATA:W4(V549_D-1)->A:W-1(V588_D-1)
	adding edge: AGTCCACCAC...CCATCTAATA:W4(V549_D-1) to A:W-1(V588_D-1)
removing edge Edge(587->588,w:4.0)(A:W-1(V587_D-1)->A:W-1(V588_D-1))
removing edge Edge(549->587,w:4.0)(AGTCCACCAC...CCATCTAATA:W4(V549_D-1)->A:W-1(V587_D-1))
Found potential edge: Edge(549->588,w:4.0) between AGTCCACCAC...CCATCTAATA:W4(V549_D-1) and A:W-1(V588_D-1)
removing vertex A:W-1(V588_D-1) was concatenated into AGTCCACCAC...CATCTAATAA:W4(V549_D-1)
Want to move edge Edge(588->589,w:4.0)(A:W-1(V588_D-1)->A:W-1(V589_D-1)) to (AGTCCACCAC...CATCTAATAA:W4(V549_D-1)->A:W-1(V589_D-1)
	adding edge: AGTCCACCAC...CATCTAATAA:W4(V549_D-1) to A:W-1(V589_D-1)
removing edge Edge(588->589,w:4.0)(A:W-1(V588_D-1)->A:W-1(V589_D-1))
removing edge Edge(549->588,w:4.0)(AGTCCACCAC...CATCTAATAA:W4(V549_D-1)->A:W-1(V588_D-1))
Found potential edge: Edge(549->589,w:4.0) between AGTCCACCAC...CATCTAATAA:W4(V549_D-1) and A:W-1(V589_D-1)
removing vertex A:W-1(V589_D-1) was concatenated into AGTCCACCAC...ATCTAATAAA:W4(V549_D-1)
Want to move edge Edge(589->590,w:4.0)(A:W-1(V589_D-1)->G:W-1(V590_D-1)) to (AGTCCACCAC...ATCTAATAAA:W4(V549_D-1)->G:W-1(V590_D-1)
	adding edge: AGTCCACCAC...ATCTAATAAA:W4(V549_D-1) to G:W-1(V590_D-1)
removing edge Edge(589->590,w:4.0)(A:W-1(V589_D-1)->G:W-1(V590_D-1))
removing edge Edge(549->589,w:4.0)(AGTCCACCAC...ATCTAATAAA:W4(V549_D-1)->A:W-1(V589_D-1))
Found potential edge: Edge(549->590,w:4.0) between AGTCCACCAC...ATCTAATAAA:W4(V549_D-1) and G:W-1(V590_D-1)
removing vertex G:W-1(V590_D-1) was concatenated into AGTCCACCAC...TCTAATAAAG:W4(V549_D-1)
Want to move edge Edge(590->591,w:2.0)(G:W-1(V590_D-1)->G:W-1(V591_D-1)) to (AGTCCACCAC...TCTAATAAAG:W4(V549_D-1)->G:W-1(V591_D-1)
	adding edge: AGTCCACCAC...TCTAATAAAG:W4(V549_D-1) to G:W-1(V591_D-1)
removing edge Edge(590->591,w:2.0)(G:W-1(V590_D-1)->G:W-1(V591_D-1))
removing edge Edge(549->590,w:4.0)(AGTCCACCAC...TCTAATAAAG:W4(V549_D-1)->G:W-1(V590_D-1))
Found potential edge: Edge(549->591,w:2.0) between AGTCCACCAC...TCTAATAAAG:W4(V549_D-1) and G:W-1(V591_D-1)
removing vertex G:W-1(V591_D-1) was concatenated into AGTCCACCAC...CTAATAAAGG:W4(V549_D-1)
Want to move edge Edge(591->592,w:2.0)(G:W-1(V591_D-1)->A:W-1(V592_D-1)) to (AGTCCACCAC...CTAATAAAGG:W4(V549_D-1)->A:W-1(V592_D-1)
	adding edge: AGTCCACCAC...CTAATAAAGG:W4(V549_D-1) to A:W-1(V592_D-1)
removing edge Edge(591->592,w:2.0)(G:W-1(V591_D-1)->A:W-1(V592_D-1))
removing edge Edge(549->591,w:2.0)(AGTCCACCAC...CTAATAAAGG:W4(V549_D-1)->G:W-1(V591_D-1))
Found potential edge: Edge(549->592,w:2.0) between AGTCCACCAC...CTAATAAAGG:W4(V549_D-1) and A:W-1(V592_D-1)
removing vertex A:W-1(V592_D-1) was concatenated into AGTCCACCAC...TAATAAAGGA:W4(V549_D-1)
Want to move edge Edge(592->593,w:2.0)(A:W-1(V592_D-1)->A:W-1(V593_D-1)) to (AGTCCACCAC...TAATAAAGGA:W4(V549_D-1)->A:W-1(V593_D-1)
	adding edge: AGTCCACCAC...TAATAAAGGA:W4(V549_D-1) to A:W-1(V593_D-1)
removing edge Edge(592->593,w:2.0)(A:W-1(V592_D-1)->A:W-1(V593_D-1))
removing edge Edge(549->592,w:2.0)(AGTCCACCAC...TAATAAAGGA:W4(V549_D-1)->A:W-1(V592_D-1))
Found potential edge: Edge(549->593,w:2.0) between AGTCCACCAC...TAATAAAGGA:W4(V549_D-1) and A:W-1(V593_D-1)
removing vertex A:W-1(V593_D-1) was concatenated into AGTCCACCAC...AATAAAGGAA:W4(V549_D-1)
Want to move edge Edge(593->594,w:2.0)(A:W-1(V593_D-1)->A:W-1(V594_D-1)) to (AGTCCACCAC...AATAAAGGAA:W4(V549_D-1)->A:W-1(V594_D-1)
	adding edge: AGTCCACCAC...AATAAAGGAA:W4(V549_D-1) to A:W-1(V594_D-1)
removing edge Edge(593->594,w:2.0)(A:W-1(V593_D-1)->A:W-1(V594_D-1))
removing edge Edge(549->593,w:2.0)(AGTCCACCAC...AATAAAGGAA:W4(V549_D-1)->A:W-1(V593_D-1))
Found potential edge: Edge(549->594,w:2.0) between AGTCCACCAC...AATAAAGGAA:W4(V549_D-1) and A:W-1(V594_D-1)
removing vertex A:W-1(V594_D-1) was concatenated into AGTCCACCAC...ATAAAGGAAA:W4(V549_D-1)
Want to move edge Edge(594->595,w:2.0)(A:W-1(V594_D-1)->A:W-1(V595_D-1)) to (AGTCCACCAC...ATAAAGGAAA:W4(V549_D-1)->A:W-1(V595_D-1)
	adding edge: AGTCCACCAC...ATAAAGGAAA:W4(V549_D-1) to A:W-1(V595_D-1)
removing edge Edge(594->595,w:2.0)(A:W-1(V594_D-1)->A:W-1(V595_D-1))
removing edge Edge(549->594,w:2.0)(AGTCCACCAC...ATAAAGGAAA:W4(V549_D-1)->A:W-1(V594_D-1))
Found potential edge: Edge(549->595,w:2.0) between AGTCCACCAC...ATAAAGGAAA:W4(V549_D-1) and A:W-1(V595_D-1)
removing vertex A:W-1(V595_D-1) was concatenated into AGTCCACCAC...TAAAGGAAAA:W4(V549_D-1)
Want to move edge Edge(595->596,w:2.0)(A:W-1(V595_D-1)->C:W-1(V596_D-1)) to (AGTCCACCAC...TAAAGGAAAA:W4(V549_D-1)->C:W-1(V596_D-1)
	adding edge: AGTCCACCAC...TAAAGGAAAA:W4(V549_D-1) to C:W-1(V596_D-1)
removing edge Edge(595->596,w:2.0)(A:W-1(V595_D-1)->C:W-1(V596_D-1))
removing edge Edge(549->595,w:2.0)(AGTCCACCAC...TAAAGGAAAA:W4(V549_D-1)->A:W-1(V595_D-1))
Found potential edge: Edge(549->596,w:2.0) between AGTCCACCAC...TAAAGGAAAA:W4(V549_D-1) and C:W-1(V596_D-1)
removing vertex C:W-1(V596_D-1) was concatenated into AGTCCACCAC...AAAGGAAAAC:W4(V549_D-1)
Want to move edge Edge(596->597,w:2.0)(C:W-1(V596_D-1)->T:W-1(V597_D-1)) to (AGTCCACCAC...AAAGGAAAAC:W4(V549_D-1)->T:W-1(V597_D-1)
	adding edge: AGTCCACCAC...AAAGGAAAAC:W4(V549_D-1) to T:W-1(V597_D-1)
removing edge Edge(596->597,w:2.0)(C:W-1(V596_D-1)->T:W-1(V597_D-1))
removing edge Edge(549->596,w:2.0)(AGTCCACCAC...AAAGGAAAAC:W4(V549_D-1)->C:W-1(V596_D-1))
Found potential edge: Edge(549->597,w:2.0) between AGTCCACCAC...AAAGGAAAAC:W4(V549_D-1) and T:W-1(V597_D-1)
removing vertex T:W-1(V597_D-1) was concatenated into AGTCCACCAC...AAGGAAAACT:W4(V549_D-1)
Want to move edge Edge(597->598,w:2.0)(T:W-1(V597_D-1)->G:W-1(V598_D-1)) to (AGTCCACCAC...AAGGAAAACT:W4(V549_D-1)->G:W-1(V598_D-1)
	adding edge: AGTCCACCAC...AAGGAAAACT:W4(V549_D-1) to G:W-1(V598_D-1)
removing edge Edge(597->598,w:2.0)(T:W-1(V597_D-1)->G:W-1(V598_D-1))
removing edge Edge(549->597,w:2.0)(AGTCCACCAC...AAGGAAAACT:W4(V549_D-1)->T:W-1(V597_D-1))
Found potential edge: Edge(549->598,w:2.0) between AGTCCACCAC...AAGGAAAACT:W4(V549_D-1) and G:W-1(V598_D-1)
removing vertex G:W-1(V598_D-1) was concatenated into AGTCCACCAC...AGGAAAACTG:W4(V549_D-1)
Want to move edge Edge(598->599,w:2.0)(G:W-1(V598_D-1)->C:W-1(V599_D-1)) to (AGTCCACCAC...AGGAAAACTG:W4(V549_D-1)->C:W-1(V599_D-1)
	adding edge: AGTCCACCAC...AGGAAAACTG:W4(V549_D-1) to C:W-1(V599_D-1)
removing edge Edge(598->599,w:2.0)(G:W-1(V598_D-1)->C:W-1(V599_D-1))
removing edge Edge(549->598,w:2.0)(AGTCCACCAC...AGGAAAACTG:W4(V549_D-1)->G:W-1(V598_D-1))
Found potential edge: Edge(549->599,w:2.0) between AGTCCACCAC...AGGAAAACTG:W4(V549_D-1) and C:W-1(V599_D-1)
removing vertex C:W-1(V599_D-1) was concatenated into AGTCCACCAC...GGAAAACTGC:W4(V549_D-1)
Want to move edge Edge(599->600,w:2.0)(C:W-1(V599_D-1)->A:W-1(V600_D-1)) to (AGTCCACCAC...GGAAAACTGC:W4(V549_D-1)->A:W-1(V600_D-1)
	adding edge: AGTCCACCAC...GGAAAACTGC:W4(V549_D-1) to A:W-1(V600_D-1)
removing edge Edge(599->600,w:2.0)(C:W-1(V599_D-1)->A:W-1(V600_D-1))
removing edge Edge(549->599,w:2.0)(AGTCCACCAC...GGAAAACTGC:W4(V549_D-1)->C:W-1(V599_D-1))
Found potential edge: Edge(549->600,w:2.0) between AGTCCACCAC...GGAAAACTGC:W4(V549_D-1) and A:W-1(V600_D-1)
removing vertex A:W-1(V600_D-1) was concatenated into AGTCCACCAC...GAAAACTGCA:W4(V549_D-1)
Want to move edge Edge(600->601,w:2.0)(A:W-1(V600_D-1)->T:W-1(V601_D-1)) to (AGTCCACCAC...GAAAACTGCA:W4(V549_D-1)->T:W-1(V601_D-1)
	adding edge: AGTCCACCAC...GAAAACTGCA:W4(V549_D-1) to T:W-1(V601_D-1)
removing edge Edge(600->601,w:2.0)(A:W-1(V600_D-1)->T:W-1(V601_D-1))
removing edge Edge(549->600,w:2.0)(AGTCCACCAC...GAAAACTGCA:W4(V549_D-1)->A:W-1(V600_D-1))
Found potential edge: Edge(549->601,w:2.0) between AGTCCACCAC...GAAAACTGCA:W4(V549_D-1) and T:W-1(V601_D-1)
removing vertex T:W-1(V601_D-1) was concatenated into AGTCCACCAC...AAAACTGCAT:W4(V549_D-1)
Want to move edge Edge(601->602,w:2.0)(T:W-1(V601_D-1)->C:W-1(V602_D-1)) to (AGTCCACCAC...AAAACTGCAT:W4(V549_D-1)->C:W-1(V602_D-1)
	adding edge: AGTCCACCAC...AAAACTGCAT:W4(V549_D-1) to C:W-1(V602_D-1)
removing edge Edge(601->602,w:2.0)(T:W-1(V601_D-1)->C:W-1(V602_D-1))
removing edge Edge(549->601,w:2.0)(AGTCCACCAC...AAAACTGCAT:W4(V549_D-1)->T:W-1(V601_D-1))
Found potential edge: Edge(549->602,w:2.0) between AGTCCACCAC...AAAACTGCAT:W4(V549_D-1) and C:W-1(V602_D-1)
removing vertex C:W-1(V602_D-1) was concatenated into AGTCCACCAC...AAACTGCATC:W4(V549_D-1)
Want to move edge Edge(602->603,w:2.0)(C:W-1(V602_D-1)->T:W-1(V603_D-1)) to (AGTCCACCAC...AAACTGCATC:W4(V549_D-1)->T:W-1(V603_D-1)
	adding edge: AGTCCACCAC...AAACTGCATC:W4(V549_D-1) to T:W-1(V603_D-1)
removing edge Edge(602->603,w:2.0)(C:W-1(V602_D-1)->T:W-1(V603_D-1))
removing edge Edge(549->602,w:2.0)(AGTCCACCAC...AAACTGCATC:W4(V549_D-1)->C:W-1(V602_D-1))
Found potential edge: Edge(549->603,w:2.0) between AGTCCACCAC...AAACTGCATC:W4(V549_D-1) and T:W-1(V603_D-1)
removing vertex T:W-1(V603_D-1) was concatenated into AGTCCACCAC...AACTGCATCT:W4(V549_D-1)
Want to move edge Edge(603->604,w:2.0)(T:W-1(V603_D-1)->T:W-1(V604_D-1)) to (AGTCCACCAC...AACTGCATCT:W4(V549_D-1)->T:W-1(V604_D-1)
	adding edge: AGTCCACCAC...AACTGCATCT:W4(V549_D-1) to T:W-1(V604_D-1)
removing edge Edge(603->604,w:2.0)(T:W-1(V603_D-1)->T:W-1(V604_D-1))
removing edge Edge(549->603,w:2.0)(AGTCCACCAC...AACTGCATCT:W4(V549_D-1)->T:W-1(V603_D-1))
Found potential edge: Edge(549->604,w:2.0) between AGTCCACCAC...AACTGCATCT:W4(V549_D-1) and T:W-1(V604_D-1)
removing vertex T:W-1(V604_D-1) was concatenated into AGTCCACCAC...ACTGCATCTT:W4(V549_D-1)
Want to move edge Edge(604->605,w:2.0)(T:W-1(V604_D-1)->T:W-1(V605_D-1)) to (AGTCCACCAC...ACTGCATCTT:W4(V549_D-1)->T:W-1(V605_D-1)
	adding edge: AGTCCACCAC...ACTGCATCTT:W4(V549_D-1) to T:W-1(V605_D-1)
removing edge Edge(604->605,w:2.0)(T:W-1(V604_D-1)->T:W-1(V605_D-1))
removing edge Edge(549->604,w:2.0)(AGTCCACCAC...ACTGCATCTT:W4(V549_D-1)->T:W-1(V604_D-1))
Found potential edge: Edge(549->605,w:2.0) between AGTCCACCAC...ACTGCATCTT:W4(V549_D-1) and T:W-1(V605_D-1)
removing vertex T:W-1(V605_D-1) was concatenated into AGTCCACCAC...CTGCATCTTT:W4(V549_D-1)
Want to move edge Edge(605->606,w:2.0)(T:W-1(V605_D-1)->G:W-1(V606_D-1)) to (AGTCCACCAC...CTGCATCTTT:W4(V549_D-1)->G:W-1(V606_D-1)
	adding edge: AGTCCACCAC...CTGCATCTTT:W4(V549_D-1) to G:W-1(V606_D-1)
removing edge Edge(605->606,w:2.0)(T:W-1(V605_D-1)->G:W-1(V606_D-1))
removing edge Edge(549->605,w:2.0)(AGTCCACCAC...CTGCATCTTT:W4(V549_D-1)->T:W-1(V605_D-1))
Found potential edge: Edge(549->606,w:2.0) between AGTCCACCAC...CTGCATCTTT:W4(V549_D-1) and G:W-1(V606_D-1)
removing vertex G:W-1(V606_D-1) was concatenated into AGTCCACCAC...TGCATCTTTG:W4(V549_D-1)
Want to move edge Edge(606->607,w:4.0)(G:W-1(V606_D-1)->C:W-1(V607_D-1)) to (AGTCCACCAC...TGCATCTTTG:W4(V549_D-1)->C:W-1(V607_D-1)
	adding edge: AGTCCACCAC...TGCATCTTTG:W4(V549_D-1) to C:W-1(V607_D-1)
removing edge Edge(606->607,w:4.0)(G:W-1(V606_D-1)->C:W-1(V607_D-1))
removing edge Edge(549->606,w:2.0)(AGTCCACCAC...TGCATCTTTG:W4(V549_D-1)->G:W-1(V606_D-1))
Found potential edge: Edge(549->607,w:4.0) between AGTCCACCAC...TGCATCTTTG:W4(V549_D-1) and C:W-1(V607_D-1)
removing vertex C:W-1(V607_D-1) was concatenated into AGTCCACCAC...GCATCTTTGC:W4(V549_D-1)
Want to move edge Edge(607->608,w:4.0)(C:W-1(V607_D-1)->C:W-1(V608_D-1)) to (AGTCCACCAC...GCATCTTTGC:W4(V549_D-1)->C:W-1(V608_D-1)
	adding edge: AGTCCACCAC...GCATCTTTGC:W4(V549_D-1) to C:W-1(V608_D-1)
removing edge Edge(607->608,w:4.0)(C:W-1(V607_D-1)->C:W-1(V608_D-1))
removing edge Edge(549->607,w:4.0)(AGTCCACCAC...GCATCTTTGC:W4(V549_D-1)->C:W-1(V607_D-1))
Found potential edge: Edge(549->608,w:4.0) between AGTCCACCAC...GCATCTTTGC:W4(V549_D-1) and C:W-1(V608_D-1)
removing vertex C:W-1(V608_D-1) was concatenated into AGTCCACCAC...CATCTTTGCC:W4(V549_D-1)
Want to move edge Edge(608->609,w:4.0)(C:W-1(V608_D-1)->C:W-1(V609_D-1)) to (AGTCCACCAC...CATCTTTGCC:W4(V549_D-1)->C:W-1(V609_D-1)
	adding edge: AGTCCACCAC...CATCTTTGCC:W4(V549_D-1) to C:W-1(V609_D-1)
removing edge Edge(608->609,w:4.0)(C:W-1(V608_D-1)->C:W-1(V609_D-1))
removing edge Edge(549->608,w:4.0)(AGTCCACCAC...CATCTTTGCC:W4(V549_D-1)->C:W-1(V608_D-1))
Found potential edge: Edge(549->609,w:4.0) between AGTCCACCAC...CATCTTTGCC:W4(V549_D-1) and C:W-1(V609_D-1)
removing vertex C:W-1(V609_D-1) was concatenated into AGTCCACCAC...ATCTTTGCCC:W4(V549_D-1)
Want to move edge Edge(609->610,w:4.0)(C:W-1(V609_D-1)->A:W-1(V610_D-1)) to (AGTCCACCAC...ATCTTTGCCC:W4(V549_D-1)->A:W-1(V610_D-1)
	adding edge: AGTCCACCAC...ATCTTTGCCC:W4(V549_D-1) to A:W-1(V610_D-1)
removing edge Edge(609->610,w:4.0)(C:W-1(V609_D-1)->A:W-1(V610_D-1))
removing edge Edge(549->609,w:4.0)(AGTCCACCAC...ATCTTTGCCC:W4(V549_D-1)->C:W-1(V609_D-1))
Found potential edge: Edge(549->610,w:4.0) between AGTCCACCAC...ATCTTTGCCC:W4(V549_D-1) and A:W-1(V610_D-1)
removing vertex A:W-1(V610_D-1) was concatenated into AGTCCACCAC...TCTTTGCCCA:W4(V549_D-1)
Want to move edge Edge(610->611,w:4.0)(A:W-1(V610_D-1)->C:W-1(V611_D-1)) to (AGTCCACCAC...TCTTTGCCCA:W4(V549_D-1)->C:W-1(V611_D-1)
	adding edge: AGTCCACCAC...TCTTTGCCCA:W4(V549_D-1) to C:W-1(V611_D-1)
removing edge Edge(610->611,w:4.0)(A:W-1(V610_D-1)->C:W-1(V611_D-1))
removing edge Edge(549->610,w:4.0)(AGTCCACCAC...TCTTTGCCCA:W4(V549_D-1)->A:W-1(V610_D-1))
Found potential edge: Edge(549->611,w:4.0) between AGTCCACCAC...TCTTTGCCCA:W4(V549_D-1) and C:W-1(V611_D-1)
removing vertex C:W-1(V611_D-1) was concatenated into AGTCCACCAC...CTTTGCCCAC:W4(V549_D-1)
Want to move edge Edge(611->612,w:4.0)(C:W-1(V611_D-1)->A:W-1(V612_D-1)) to (AGTCCACCAC...CTTTGCCCAC:W4(V549_D-1)->A:W-1(V612_D-1)
	adding edge: AGTCCACCAC...CTTTGCCCAC:W4(V549_D-1) to A:W-1(V612_D-1)
removing edge Edge(611->612,w:4.0)(C:W-1(V611_D-1)->A:W-1(V612_D-1))
removing edge Edge(549->611,w:4.0)(AGTCCACCAC...CTTTGCCCAC:W4(V549_D-1)->C:W-1(V611_D-1))
Found potential edge: Edge(549->612,w:4.0) between AGTCCACCAC...CTTTGCCCAC:W4(V549_D-1) and A:W-1(V612_D-1)
removing vertex A:W-1(V612_D-1) was concatenated into AGTCCACCAC...TTTGCCCACA:W4(V549_D-1)
Want to move edge Edge(612->613,w:6.0)(A:W-1(V612_D-1)->T:W-1(V613_D-1)) to (AGTCCACCAC...TTTGCCCACA:W4(V549_D-1)->T:W-1(V613_D-1)
	adding edge: AGTCCACCAC...TTTGCCCACA:W4(V549_D-1) to T:W-1(V613_D-1)
removing edge Edge(612->613,w:6.0)(A:W-1(V612_D-1)->T:W-1(V613_D-1))
removing edge Edge(549->612,w:4.0)(AGTCCACCAC...TTTGCCCACA:W4(V549_D-1)->A:W-1(V612_D-1))
Found potential edge: Edge(549->613,w:6.0) between AGTCCACCAC...TTTGCCCACA:W4(V549_D-1) and T:W-1(V613_D-1)
removing vertex T:W-1(V613_D-1) was concatenated into AGTCCACCAC...TTGCCCACAT:W4(V549_D-1)
Want to move edge Edge(613->614,w:6.0)(T:W-1(V613_D-1)->G:W-1(V614_D-1)) to (AGTCCACCAC...TTGCCCACAT:W4(V549_D-1)->G:W-1(V614_D-1)
	adding edge: AGTCCACCAC...TTGCCCACAT:W4(V549_D-1) to G:W-1(V614_D-1)
removing edge Edge(613->614,w:6.0)(T:W-1(V613_D-1)->G:W-1(V614_D-1))
removing edge Edge(549->613,w:6.0)(AGTCCACCAC...TTGCCCACAT:W4(V549_D-1)->T:W-1(V613_D-1))
Found potential edge: Edge(549->614,w:6.0) between AGTCCACCAC...TTGCCCACAT:W4(V549_D-1) and G:W-1(V614_D-1)
removing vertex G:W-1(V614_D-1) was concatenated into AGTCCACCAC...TGCCCACATG:W4(V549_D-1)
Want to move edge Edge(614->615,w:6.0)(G:W-1(V614_D-1)->A:W-1(V615_D-1)) to (AGTCCACCAC...TGCCCACATG:W4(V549_D-1)->A:W-1(V615_D-1)
	adding edge: AGTCCACCAC...TGCCCACATG:W4(V549_D-1) to A:W-1(V615_D-1)
removing edge Edge(614->615,w:6.0)(G:W-1(V614_D-1)->A:W-1(V615_D-1))
removing edge Edge(549->614,w:6.0)(AGTCCACCAC...TGCCCACATG:W4(V549_D-1)->G:W-1(V614_D-1))
Found potential edge: Edge(549->615,w:6.0) between AGTCCACCAC...TGCCCACATG:W4(V549_D-1) and A:W-1(V615_D-1)
removing vertex A:W-1(V615_D-1) was concatenated into AGTCCACCAC...GCCCACATGA:W4(V549_D-1)
Want to move edge Edge(615->616,w:6.0)(A:W-1(V615_D-1)->T:W-1(V616_D-1)) to (AGTCCACCAC...GCCCACATGA:W4(V549_D-1)->T:W-1(V616_D-1)
	adding edge: AGTCCACCAC...GCCCACATGA:W4(V549_D-1) to T:W-1(V616_D-1)
removing edge Edge(615->616,w:6.0)(A:W-1(V615_D-1)->T:W-1(V616_D-1))
removing edge Edge(549->615,w:6.0)(AGTCCACCAC...GCCCACATGA:W4(V549_D-1)->A:W-1(V615_D-1))
Found potential edge: Edge(549->616,w:6.0) between AGTCCACCAC...GCCCACATGA:W4(V549_D-1) and T:W-1(V616_D-1)
removing vertex T:W-1(V616_D-1) was concatenated into AGTCCACCAC...CCCACATGAT:W4(V549_D-1)
Want to move edge Edge(616->617,w:6.0)(T:W-1(V616_D-1)->G:W-1(V617_D-1)) to (AGTCCACCAC...CCCACATGAT:W4(V549_D-1)->G:W-1(V617_D-1)
	adding edge: AGTCCACCAC...CCCACATGAT:W4(V549_D-1) to G:W-1(V617_D-1)
removing edge Edge(616->617,w:6.0)(T:W-1(V616_D-1)->G:W-1(V617_D-1))
removing edge Edge(549->616,w:6.0)(AGTCCACCAC...CCCACATGAT:W4(V549_D-1)->T:W-1(V616_D-1))
Found potential edge: Edge(549->617,w:6.0) between AGTCCACCAC...CCCACATGAT:W4(V549_D-1) and G:W-1(V617_D-1)
removing vertex G:W-1(V617_D-1) was concatenated into AGTCCACCAC...CCACATGATG:W4(V549_D-1)
Want to move edge Edge(617->618,w:6.0)(G:W-1(V617_D-1)->C:W-1(V618_D-1)) to (AGTCCACCAC...CCACATGATG:W4(V549_D-1)->C:W-1(V618_D-1)
	adding edge: AGTCCACCAC...CCACATGATG:W4(V549_D-1) to C:W-1(V618_D-1)
removing edge Edge(617->618,w:6.0)(G:W-1(V617_D-1)->C:W-1(V618_D-1))
removing edge Edge(549->617,w:6.0)(AGTCCACCAC...CCACATGATG:W4(V549_D-1)->G:W-1(V617_D-1))
Found potential edge: Edge(549->618,w:6.0) between AGTCCACCAC...CCACATGATG:W4(V549_D-1) and C:W-1(V618_D-1)
removing vertex C:W-1(V618_D-1) was concatenated into AGTCCACCAC...CACATGATGC:W4(V549_D-1)
Want to move edge Edge(618->619,w:6.0)(C:W-1(V618_D-1)->T:W-1(V619_D-1)) to (AGTCCACCAC...CACATGATGC:W4(V549_D-1)->T:W-1(V619_D-1)
	adding edge: AGTCCACCAC...CACATGATGC:W4(V549_D-1) to T:W-1(V619_D-1)
removing edge Edge(618->619,w:6.0)(C:W-1(V618_D-1)->T:W-1(V619_D-1))
removing edge Edge(549->618,w:6.0)(AGTCCACCAC...CACATGATGC:W4(V549_D-1)->C:W-1(V618_D-1))
Found potential edge: Edge(549->619,w:6.0) between AGTCCACCAC...CACATGATGC:W4(V549_D-1) and T:W-1(V619_D-1)
removing vertex T:W-1(V619_D-1) was concatenated into AGTCCACCAC...ACATGATGCT:W4(V549_D-1)
Want to move edge Edge(619->620,w:4.0)(T:W-1(V619_D-1)->T:W-1(V620_D-1)) to (AGTCCACCAC...ACATGATGCT:W4(V549_D-1)->T:W-1(V620_D-1)
	adding edge: AGTCCACCAC...ACATGATGCT:W4(V549_D-1) to T:W-1(V620_D-1)
removing edge Edge(619->620,w:4.0)(T:W-1(V619_D-1)->T:W-1(V620_D-1))
removing edge Edge(549->619,w:6.0)(AGTCCACCAC...ACATGATGCT:W4(V549_D-1)->T:W-1(V619_D-1))
Found potential edge: Edge(549->620,w:4.0) between AGTCCACCAC...ACATGATGCT:W4(V549_D-1) and T:W-1(V620_D-1)
removing vertex T:W-1(V620_D-1) was concatenated into AGTCCACCAC...CATGATGCTT:W4(V549_D-1)
Want to move edge Edge(620->621,w:4.0)(T:W-1(V620_D-1)->G:W-1(V621_D-1)) to (AGTCCACCAC...CATGATGCTT:W4(V549_D-1)->G:W-1(V621_D-1)
	adding edge: AGTCCACCAC...CATGATGCTT:W4(V549_D-1) to G:W-1(V621_D-1)
removing edge Edge(620->621,w:4.0)(T:W-1(V620_D-1)->G:W-1(V621_D-1))
removing edge Edge(549->620,w:4.0)(AGTCCACCAC...CATGATGCTT:W4(V549_D-1)->T:W-1(V620_D-1))
Found potential edge: Edge(549->621,w:4.0) between AGTCCACCAC...CATGATGCTT:W4(V549_D-1) and G:W-1(V621_D-1)
removing vertex G:W-1(V621_D-1) was concatenated into AGTCCACCAC...ATGATGCTTG:W4(V549_D-1)
Want to move edge Edge(621->622,w:4.0)(G:W-1(V621_D-1)->G:W-1(V622_D-1)) to (AGTCCACCAC...ATGATGCTTG:W4(V549_D-1)->G:W-1(V622_D-1)
	adding edge: AGTCCACCAC...ATGATGCTTG:W4(V549_D-1) to G:W-1(V622_D-1)
removing edge Edge(621->622,w:4.0)(G:W-1(V621_D-1)->G:W-1(V622_D-1))
removing edge Edge(549->621,w:4.0)(AGTCCACCAC...ATGATGCTTG:W4(V549_D-1)->G:W-1(V621_D-1))
Found potential edge: Edge(549->622,w:4.0) between AGTCCACCAC...ATGATGCTTG:W4(V549_D-1) and G:W-1(V622_D-1)
removing vertex G:W-1(V622_D-1) was concatenated into AGTCCACCAC...TGATGCTTGG:W4(V549_D-1)
Want to move edge Edge(622->623,w:4.0)(G:W-1(V622_D-1)->T:W-1(V623_D-1)) to (AGTCCACCAC...TGATGCTTGG:W4(V549_D-1)->T:W-1(V623_D-1)
	adding edge: AGTCCACCAC...TGATGCTTGG:W4(V549_D-1) to T:W-1(V623_D-1)
removing edge Edge(622->623,w:4.0)(G:W-1(V622_D-1)->T:W-1(V623_D-1))
removing edge Edge(549->622,w:4.0)(AGTCCACCAC...TGATGCTTGG:W4(V549_D-1)->G:W-1(V622_D-1))
Found potential edge: Edge(549->623,w:4.0) between AGTCCACCAC...TGATGCTTGG:W4(V549_D-1) and T:W-1(V623_D-1)
removing vertex T:W-1(V623_D-1) was concatenated into AGTCCACCAC...GATGCTTGGT:W4(V549_D-1)
Want to move edge Edge(623->624,w:4.0)(T:W-1(V623_D-1)->T:W-1(V624_D-1)) to (AGTCCACCAC...GATGCTTGGT:W4(V549_D-1)->T:W-1(V624_D-1)
	adding edge: AGTCCACCAC...GATGCTTGGT:W4(V549_D-1) to T:W-1(V624_D-1)
removing edge Edge(623->624,w:4.0)(T:W-1(V623_D-1)->T:W-1(V624_D-1))
removing edge Edge(549->623,w:4.0)(AGTCCACCAC...GATGCTTGGT:W4(V549_D-1)->T:W-1(V623_D-1))
Found potential edge: Edge(549->624,w:4.0) between AGTCCACCAC...GATGCTTGGT:W4(V549_D-1) and T:W-1(V624_D-1)
removing vertex T:W-1(V624_D-1) was concatenated into AGTCCACCAC...ATGCTTGGTT:W4(V549_D-1)
Want to move edge Edge(624->625,w:4.0)(T:W-1(V624_D-1)->A:W-1(V625_D-1)) to (AGTCCACCAC...ATGCTTGGTT:W4(V549_D-1)->A:W-1(V625_D-1)
	adding edge: AGTCCACCAC...ATGCTTGGTT:W4(V549_D-1) to A:W-1(V625_D-1)
removing edge Edge(624->625,w:4.0)(T:W-1(V624_D-1)->A:W-1(V625_D-1))
removing edge Edge(549->624,w:4.0)(AGTCCACCAC...ATGCTTGGTT:W4(V549_D-1)->T:W-1(V624_D-1))
Found potential edge: Edge(549->625,w:4.0) between AGTCCACCAC...ATGCTTGGTT:W4(V549_D-1) and A:W-1(V625_D-1)
removing vertex A:W-1(V625_D-1) was concatenated into AGTCCACCAC...TGCTTGGTTA:W4(V549_D-1)
Want to move edge Edge(625->626,w:4.0)(A:W-1(V625_D-1)->A:W-1(V626_D-1)) to (AGTCCACCAC...TGCTTGGTTA:W4(V549_D-1)->A:W-1(V626_D-1)
	adding edge: AGTCCACCAC...TGCTTGGTTA:W4(V549_D-1) to A:W-1(V626_D-1)
removing edge Edge(625->626,w:4.0)(A:W-1(V625_D-1)->A:W-1(V626_D-1))
removing edge Edge(549->625,w:4.0)(AGTCCACCAC...TGCTTGGTTA:W4(V549_D-1)->A:W-1(V625_D-1))
Found potential edge: Edge(549->626,w:4.0) between AGTCCACCAC...TGCTTGGTTA:W4(V549_D-1) and A:W-1(V626_D-1)
removing vertex A:W-1(V626_D-1) was concatenated into AGTCCACCAC...GCTTGGTTAA:W4(V549_D-1)
Want to move edge Edge(626->627,w:4.0)(A:W-1(V626_D-1)->G:W-1(V627_D-1)) to (AGTCCACCAC...GCTTGGTTAA:W4(V549_D-1)->G:W-1(V627_D-1)
	adding edge: AGTCCACCAC...GCTTGGTTAA:W4(V549_D-1) to G:W-1(V627_D-1)
removing edge Edge(626->627,w:4.0)(A:W-1(V626_D-1)->G:W-1(V627_D-1))
removing edge Edge(549->626,w:4.0)(AGTCCACCAC...GCTTGGTTAA:W4(V549_D-1)->A:W-1(V626_D-1))
Found potential edge: Edge(549->627,w:4.0) between AGTCCACCAC...GCTTGGTTAA:W4(V549_D-1) and G:W-1(V627_D-1)
removing vertex G:W-1(V627_D-1) was concatenated into AGTCCACCAC...CTTGGTTAAG:W4(V549_D-1)
Want to move edge Edge(627->628,w:4.0)(G:W-1(V627_D-1)->A:W-1(V628_D-1)) to (AGTCCACCAC...CTTGGTTAAG:W4(V549_D-1)->A:W-1(V628_D-1)
	adding edge: AGTCCACCAC...CTTGGTTAAG:W4(V549_D-1) to A:W-1(V628_D-1)
removing edge Edge(627->628,w:4.0)(G:W-1(V627_D-1)->A:W-1(V628_D-1))
removing edge Edge(549->627,w:4.0)(AGTCCACCAC...CTTGGTTAAG:W4(V549_D-1)->G:W-1(V627_D-1))
Found potential edge: Edge(549->628,w:4.0) between AGTCCACCAC...CTTGGTTAAG:W4(V549_D-1) and A:W-1(V628_D-1)
removing vertex A:W-1(V628_D-1) was concatenated into AGTCCACCAC...TTGGTTAAGA:W4(V549_D-1)
Want to move edge Edge(628->629,w:4.0)(A:W-1(V628_D-1)->C:W-1(V629_D-1)) to (AGTCCACCAC...TTGGTTAAGA:W4(V549_D-1)->C:W-1(V629_D-1)
	adding edge: AGTCCACCAC...TTGGTTAAGA:W4(V549_D-1) to C:W-1(V629_D-1)
removing edge Edge(628->629,w:4.0)(A:W-1(V628_D-1)->C:W-1(V629_D-1))
removing edge Edge(549->628,w:4.0)(AGTCCACCAC...TTGGTTAAGA:W4(V549_D-1)->A:W-1(V628_D-1))
Found potential edge: Edge(549->629,w:4.0) between AGTCCACCAC...TTGGTTAAGA:W4(V549_D-1) and C:W-1(V629_D-1)
removing vertex C:W-1(V629_D-1) was concatenated into AGTCCACCAC...TGGTTAAGAC:W4(V549_D-1)
Want to move edge Edge(629->630,w:4.0)(C:W-1(V629_D-1)->A:W-1(V630_D-1)) to (AGTCCACCAC...TGGTTAAGAC:W4(V549_D-1)->A:W-1(V630_D-1)
	adding edge: AGTCCACCAC...TGGTTAAGAC:W4(V549_D-1) to A:W-1(V630_D-1)
removing edge Edge(629->630,w:4.0)(C:W-1(V629_D-1)->A:W-1(V630_D-1))
removing edge Edge(549->629,w:4.0)(AGTCCACCAC...TGGTTAAGAC:W4(V549_D-1)->C:W-1(V629_D-1))
Found potential edge: Edge(549->630,w:4.0) between AGTCCACCAC...TGGTTAAGAC:W4(V549_D-1) and A:W-1(V630_D-1)
removing vertex A:W-1(V630_D-1) was concatenated into AGTCCACCAC...GGTTAAGACA:W4(V549_D-1)
Want to move edge Edge(630->631,w:4.0)(A:W-1(V630_D-1)->A:W-1(V631_D-1)) to (AGTCCACCAC...GGTTAAGACA:W4(V549_D-1)->A:W-1(V631_D-1)
	adding edge: AGTCCACCAC...GGTTAAGACA:W4(V549_D-1) to A:W-1(V631_D-1)
removing edge Edge(630->631,w:4.0)(A:W-1(V630_D-1)->A:W-1(V631_D-1))
removing edge Edge(549->630,w:4.0)(AGTCCACCAC...GGTTAAGACA:W4(V549_D-1)->A:W-1(V630_D-1))
Found potential edge: Edge(549->631,w:4.0) between AGTCCACCAC...GGTTAAGACA:W4(V549_D-1) and A:W-1(V631_D-1)
removing vertex A:W-1(V631_D-1) was concatenated into AGTCCACCAC...GTTAAGACAA:W4(V549_D-1)
Want to move edge Edge(631->632,w:6.0)(A:W-1(V631_D-1)->G:W-1(V632_D-1)) to (AGTCCACCAC...GTTAAGACAA:W4(V549_D-1)->G:W-1(V632_D-1)
	adding edge: AGTCCACCAC...GTTAAGACAA:W4(V549_D-1) to G:W-1(V632_D-1)
removing edge Edge(631->632,w:6.0)(A:W-1(V631_D-1)->G:W-1(V632_D-1))
removing edge Edge(549->631,w:4.0)(AGTCCACCAC...GTTAAGACAA:W4(V549_D-1)->A:W-1(V631_D-1))
Found potential edge: Edge(549->632,w:6.0) between AGTCCACCAC...GTTAAGACAA:W4(V549_D-1) and G:W-1(V632_D-1)
removing vertex G:W-1(V632_D-1) was concatenated into AGTCCACCAC...TTAAGACAAG:W4(V549_D-1)
Want to move edge Edge(632->633,w:6.0)(G:W-1(V632_D-1)->G:W-1(V633_D-1)) to (AGTCCACCAC...TTAAGACAAG:W4(V549_D-1)->G:W-1(V633_D-1)
	adding edge: AGTCCACCAC...TTAAGACAAG:W4(V549_D-1) to G:W-1(V633_D-1)
removing edge Edge(632->633,w:6.0)(G:W-1(V632_D-1)->G:W-1(V633_D-1))
removing edge Edge(549->632,w:6.0)(AGTCCACCAC...TTAAGACAAG:W4(V549_D-1)->G:W-1(V632_D-1))
Found potential edge: Edge(549->633,w:6.0) between AGTCCACCAC...TTAAGACAAG:W4(V549_D-1) and G:W-1(V633_D-1)
removing vertex G:W-1(V633_D-1) was concatenated into AGTCCACCAC...TAAGACAAGG:W4(V549_D-1)
Want to move edge Edge(633->634,w:6.0)(G:W-1(V633_D-1)->G:W-1(V634_D-1)) to (AGTCCACCAC...TAAGACAAGG:W4(V549_D-1)->G:W-1(V634_D-1)
	adding edge: AGTCCACCAC...TAAGACAAGG:W4(V549_D-1) to G:W-1(V634_D-1)
removing edge Edge(633->634,w:6.0)(G:W-1(V633_D-1)->G:W-1(V634_D-1))
removing edge Edge(549->633,w:6.0)(AGTCCACCAC...TAAGACAAGG:W4(V549_D-1)->G:W-1(V633_D-1))
Found potential edge: Edge(549->634,w:6.0) between AGTCCACCAC...TAAGACAAGG:W4(V549_D-1) and G:W-1(V634_D-1)
removing vertex G:W-1(V634_D-1) was concatenated into AGTCCACCAC...AAGACAAGGG:W4(V549_D-1)
Want to move edge Edge(634->635,w:6.0)(G:W-1(V634_D-1)->G:W-1(V635_D-1)) to (AGTCCACCAC...AAGACAAGGG:W4(V549_D-1)->G:W-1(V635_D-1)
	adding edge: AGTCCACCAC...AAGACAAGGG:W4(V549_D-1) to G:W-1(V635_D-1)
removing edge Edge(634->635,w:6.0)(G:W-1(V634_D-1)->G:W-1(V635_D-1))
removing edge Edge(549->634,w:6.0)(AGTCCACCAC...AAGACAAGGG:W4(V549_D-1)->G:W-1(V634_D-1))
Found potential edge: Edge(549->635,w:6.0) between AGTCCACCAC...AAGACAAGGG:W4(V549_D-1) and G:W-1(V635_D-1)
removing vertex G:W-1(V635_D-1) was concatenated into AGTCCACCAC...AGACAAGGGG:W4(V549_D-1)
Want to move edge Edge(635->636,w:6.0)(G:W-1(V635_D-1)->T:W-1(V636_D-1)) to (AGTCCACCAC...AGACAAGGGG:W4(V549_D-1)->T:W-1(V636_D-1)
	adding edge: AGTCCACCAC...AGACAAGGGG:W4(V549_D-1) to T:W-1(V636_D-1)
removing edge Edge(635->636,w:6.0)(G:W-1(V635_D-1)->T:W-1(V636_D-1))
removing edge Edge(549->635,w:6.0)(AGTCCACCAC...AGACAAGGGG:W4(V549_D-1)->G:W-1(V635_D-1))
Found potential edge: Edge(549->636,w:6.0) between AGTCCACCAC...AGACAAGGGG:W4(V549_D-1) and T:W-1(V636_D-1)
removing vertex T:W-1(V636_D-1) was concatenated into AGTCCACCAC...GACAAGGGGT:W4(V549_D-1)
Want to move edge Edge(636->637,w:6.0)(T:W-1(V636_D-1)->T:W-1(V637_D-1)) to (AGTCCACCAC...GACAAGGGGT:W4(V549_D-1)->T:W-1(V637_D-1)
	adding edge: AGTCCACCAC...GACAAGGGGT:W4(V549_D-1) to T:W-1(V637_D-1)
removing edge Edge(636->637,w:6.0)(T:W-1(V636_D-1)->T:W-1(V637_D-1))
removing edge Edge(549->636,w:6.0)(AGTCCACCAC...GACAAGGGGT:W4(V549_D-1)->T:W-1(V636_D-1))
Found potential edge: Edge(549->637,w:6.0) between AGTCCACCAC...GACAAGGGGT:W4(V549_D-1) and T:W-1(V637_D-1)
removing vertex T:W-1(V637_D-1) was concatenated into AGTCCACCAC...ACAAGGGGTT:W4(V549_D-1)
Want to move edge Edge(637->638,w:6.0)(T:W-1(V637_D-1)->A:W-1(V638_D-1)) to (AGTCCACCAC...ACAAGGGGTT:W4(V549_D-1)->A:W-1(V638_D-1)
	adding edge: AGTCCACCAC...ACAAGGGGTT:W4(V549_D-1) to A:W-1(V638_D-1)
removing edge Edge(637->638,w:6.0)(T:W-1(V637_D-1)->A:W-1(V638_D-1))
removing edge Edge(549->637,w:6.0)(AGTCCACCAC...ACAAGGGGTT:W4(V549_D-1)->T:W-1(V637_D-1))
Found potential edge: Edge(549->638,w:6.0) between AGTCCACCAC...ACAAGGGGTT:W4(V549_D-1) and A:W-1(V638_D-1)
removing vertex A:W-1(V638_D-1) was concatenated into AGTCCACCAC...CAAGGGGTTA:W4(V549_D-1)
Want to move edge Edge(638->639,w:6.0)(A:W-1(V638_D-1)->G:W-1(V639_D-1)) to (AGTCCACCAC...CAAGGGGTTA:W4(V549_D-1)->G:W-1(V639_D-1)
	adding edge: AGTCCACCAC...CAAGGGGTTA:W4(V549_D-1) to G:W-1(V639_D-1)
removing edge Edge(638->639,w:6.0)(A:W-1(V638_D-1)->G:W-1(V639_D-1))
removing edge Edge(549->638,w:6.0)(AGTCCACCAC...CAAGGGGTTA:W4(V549_D-1)->A:W-1(V638_D-1))
Found potential edge: Edge(549->639,w:6.0) between AGTCCACCAC...CAAGGGGTTA:W4(V549_D-1) and G:W-1(V639_D-1)
removing vertex G:W-1(V639_D-1) was concatenated into AGTCCACCAC...AAGGGGTTAG:W4(V549_D-1)
Want to move edge Edge(639->640,w:8.0)(G:W-1(V639_D-1)->T:W-1(V640_D-1)) to (AGTCCACCAC...AAGGGGTTAG:W4(V549_D-1)->T:W-1(V640_D-1)
	adding edge: AGTCCACCAC...AAGGGGTTAG:W4(V549_D-1) to T:W-1(V640_D-1)
removing edge Edge(639->640,w:8.0)(G:W-1(V639_D-1)->T:W-1(V640_D-1))
removing edge Edge(549->639,w:6.0)(AGTCCACCAC...AAGGGGTTAG:W4(V549_D-1)->G:W-1(V639_D-1))
Found potential edge: Edge(549->640,w:8.0) between AGTCCACCAC...AAGGGGTTAG:W4(V549_D-1) and T:W-1(V640_D-1)
removing vertex T:W-1(V640_D-1) was concatenated into AGTCCACCAC...AGGGGTTAGT:W4(V549_D-1)
Want to move edge Edge(640->641,w:8.0)(T:W-1(V640_D-1)->G:W-1(V641_D-1)) to (AGTCCACCAC...AGGGGTTAGT:W4(V549_D-1)->G:W-1(V641_D-1)
	adding edge: AGTCCACCAC...AGGGGTTAGT:W4(V549_D-1) to G:W-1(V641_D-1)
removing edge Edge(640->641,w:8.0)(T:W-1(V640_D-1)->G:W-1(V641_D-1))
removing edge Edge(549->640,w:8.0)(AGTCCACCAC...AGGGGTTAGT:W4(V549_D-1)->T:W-1(V640_D-1))
Found potential edge: Edge(549->641,w:8.0) between AGTCCACCAC...AGGGGTTAGT:W4(V549_D-1) and G:W-1(V641_D-1)
removing vertex G:W-1(V641_D-1) was concatenated into AGTCCACCAC...GGGGTTAGTG:W4(V549_D-1)
Want to move edge Edge(641->642,w:8.0)(G:W-1(V641_D-1)->A:W-1(V642_D-1)) to (AGTCCACCAC...GGGGTTAGTG:W4(V549_D-1)->A:W-1(V642_D-1)
	adding edge: AGTCCACCAC...GGGGTTAGTG:W4(V549_D-1) to A:W-1(V642_D-1)
removing edge Edge(641->642,w:8.0)(G:W-1(V641_D-1)->A:W-1(V642_D-1))
removing edge Edge(549->641,w:8.0)(AGTCCACCAC...GGGGTTAGTG:W4(V549_D-1)->G:W-1(V641_D-1))
Found potential edge: Edge(549->642,w:8.0) between AGTCCACCAC...GGGGTTAGTG:W4(V549_D-1) and A:W-1(V642_D-1)
removing vertex A:W-1(V642_D-1) was concatenated into AGTCCACCAC...GGGTTAGTGA:W4(V549_D-1)
Want to move edge Edge(642->643,w:8.0)(A:W-1(V642_D-1)->C:W-1(V643_D-1)) to (AGTCCACCAC...GGGTTAGTGA:W4(V549_D-1)->C:W-1(V643_D-1)
	adding edge: AGTCCACCAC...GGGTTAGTGA:W4(V549_D-1) to C:W-1(V643_D-1)
removing edge Edge(642->643,w:8.0)(A:W-1(V642_D-1)->C:W-1(V643_D-1))
removing edge Edge(549->642,w:8.0)(AGTCCACCAC...GGGTTAGTGA:W4(V549_D-1)->A:W-1(V642_D-1))
Found potential edge: Edge(549->643,w:8.0) between AGTCCACCAC...GGGTTAGTGA:W4(V549_D-1) and C:W-1(V643_D-1)
removing vertex C:W-1(V643_D-1) was concatenated into AGTCCACCAC...GGTTAGTGAC:W4(V549_D-1)
Want to move edge Edge(643->644,w:8.0)(C:W-1(V643_D-1)->A:W-1(V644_D-1)) to (AGTCCACCAC...GGTTAGTGAC:W4(V549_D-1)->A:W-1(V644_D-1)
	adding edge: AGTCCACCAC...GGTTAGTGAC:W4(V549_D-1) to A:W-1(V644_D-1)
removing edge Edge(643->644,w:8.0)(C:W-1(V643_D-1)->A:W-1(V644_D-1))
removing edge Edge(549->643,w:8.0)(AGTCCACCAC...GGTTAGTGAC:W4(V549_D-1)->C:W-1(V643_D-1))
Found potential edge: Edge(549->644,w:8.0) between AGTCCACCAC...GGTTAGTGAC:W4(V549_D-1) and A:W-1(V644_D-1)
removing vertex A:W-1(V644_D-1) was concatenated into AGTCCACCAC...GTTAGTGACA:W4(V549_D-1)
Want to move edge Edge(644->645,w:8.0)(A:W-1(V644_D-1)->A:W-1(V645_D-1)) to (AGTCCACCAC...GTTAGTGACA:W4(V549_D-1)->A:W-1(V645_D-1)
	adding edge: AGTCCACCAC...GTTAGTGACA:W4(V549_D-1) to A:W-1(V645_D-1)
removing edge Edge(644->645,w:8.0)(A:W-1(V644_D-1)->A:W-1(V645_D-1))
removing edge Edge(549->644,w:8.0)(AGTCCACCAC...GTTAGTGACA:W4(V549_D-1)->A:W-1(V644_D-1))
Found potential edge: Edge(549->645,w:8.0) between AGTCCACCAC...GTTAGTGACA:W4(V549_D-1) and A:W-1(V645_D-1)
removing vertex A:W-1(V645_D-1) was concatenated into AGTCCACCAC...TTAGTGACAA:W4(V549_D-1)
Want to move edge Edge(645->646,w:8.0)(A:W-1(V645_D-1)->A:W-1(V646_D-1)) to (AGTCCACCAC...TTAGTGACAA:W4(V549_D-1)->A:W-1(V646_D-1)
	adding edge: AGTCCACCAC...TTAGTGACAA:W4(V549_D-1) to A:W-1(V646_D-1)
removing edge Edge(645->646,w:8.0)(A:W-1(V645_D-1)->A:W-1(V646_D-1))
removing edge Edge(549->645,w:8.0)(AGTCCACCAC...TTAGTGACAA:W4(V549_D-1)->A:W-1(V645_D-1))
Found potential edge: Edge(549->646,w:8.0) between AGTCCACCAC...TTAGTGACAA:W4(V549_D-1) and A:W-1(V646_D-1)
removing vertex A:W-1(V646_D-1) was concatenated into AGTCCACCAC...TAGTGACAAA:W4(V549_D-1)
Want to move edge Edge(646->647,w:8.0)(A:W-1(V646_D-1)->G:W-1(V647_D-1)) to (AGTCCACCAC...TAGTGACAAA:W4(V549_D-1)->G:W-1(V647_D-1)
	adding edge: AGTCCACCAC...TAGTGACAAA:W4(V549_D-1) to G:W-1(V647_D-1)
removing edge Edge(646->647,w:8.0)(A:W-1(V646_D-1)->G:W-1(V647_D-1))
removing edge Edge(549->646,w:8.0)(AGTCCACCAC...TAGTGACAAA:W4(V549_D-1)->A:W-1(V646_D-1))
Found potential edge: Edge(549->647,w:8.0) between AGTCCACCAC...TAGTGACAAA:W4(V549_D-1) and G:W-1(V647_D-1)
removing vertex G:W-1(V647_D-1) was concatenated into AGTCCACCAC...AGTGACAAAG:W4(V549_D-1)
Want to move edge Edge(647->648,w:8.0)(G:W-1(V647_D-1)->T:W-1(V648_D-1)) to (AGTCCACCAC...AGTGACAAAG:W4(V549_D-1)->T:W-1(V648_D-1)
	adding edge: AGTCCACCAC...AGTGACAAAG:W4(V549_D-1) to T:W-1(V648_D-1)
removing edge Edge(647->648,w:8.0)(G:W-1(V647_D-1)->T:W-1(V648_D-1))
removing edge Edge(549->647,w:8.0)(AGTCCACCAC...AGTGACAAAG:W4(V549_D-1)->G:W-1(V647_D-1))
Found potential edge: Edge(549->648,w:8.0) between AGTCCACCAC...AGTGACAAAG:W4(V549_D-1) and T:W-1(V648_D-1)
removing vertex T:W-1(V648_D-1) was concatenated into AGTCCACCAC...GTGACAAAGT:W4(V549_D-1)
Want to move edge Edge(648->649,w:8.0)(T:W-1(V648_D-1)->A:W-1(V649_D-1)) to (AGTCCACCAC...GTGACAAAGT:W4(V549_D-1)->A:W-1(V649_D-1)
	adding edge: AGTCCACCAC...GTGACAAAGT:W4(V549_D-1) to A:W-1(V649_D-1)
removing edge Edge(648->649,w:8.0)(T:W-1(V648_D-1)->A:W-1(V649_D-1))
removing edge Edge(549->648,w:8.0)(AGTCCACCAC...GTGACAAAGT:W4(V549_D-1)->T:W-1(V648_D-1))
Found potential edge: Edge(549->649,w:8.0) between AGTCCACCAC...GTGACAAAGT:W4(V549_D-1) and A:W-1(V649_D-1)
removing vertex A:W-1(V649_D-1) was concatenated into AGTCCACCAC...TGACAAAGTA:W4(V549_D-1)
Want to move edge Edge(649->650,w:8.0)(A:W-1(V649_D-1)->A:W-1(V650_D-1)) to (AGTCCACCAC...TGACAAAGTA:W4(V549_D-1)->A:W-1(V650_D-1)
	adding edge: AGTCCACCAC...TGACAAAGTA:W4(V549_D-1) to A:W-1(V650_D-1)
removing edge Edge(649->650,w:8.0)(A:W-1(V649_D-1)->A:W-1(V650_D-1))
removing edge Edge(549->649,w:8.0)(AGTCCACCAC...TGACAAAGTA:W4(V549_D-1)->A:W-1(V649_D-1))
Found potential edge: Edge(549->650,w:8.0) between AGTCCACCAC...TGACAAAGTA:W4(V549_D-1) and A:W-1(V650_D-1)
removing vertex A:W-1(V650_D-1) was concatenated into AGTCCACCAC...GACAAAGTAA:W4(V549_D-1)
Want to move edge Edge(650->651,w:8.0)(A:W-1(V650_D-1)->A:W-1(V651_D-1)) to (AGTCCACCAC...GACAAAGTAA:W4(V549_D-1)->A:W-1(V651_D-1)
	adding edge: AGTCCACCAC...GACAAAGTAA:W4(V549_D-1) to A:W-1(V651_D-1)
removing edge Edge(650->651,w:8.0)(A:W-1(V650_D-1)->A:W-1(V651_D-1))
removing edge Edge(549->650,w:8.0)(AGTCCACCAC...GACAAAGTAA:W4(V549_D-1)->A:W-1(V650_D-1))
Found potential edge: Edge(549->651,w:8.0) between AGTCCACCAC...GACAAAGTAA:W4(V549_D-1) and A:W-1(V651_D-1)
removing vertex A:W-1(V651_D-1) was concatenated into AGTCCACCAC...ACAAAGTAAA:W5(V549_D-1)
Want to move edge Edge(651->652,w:8.0)(A:W-1(V651_D-1)->G:W-1(V652_D-1)) to (AGTCCACCAC...ACAAAGTAAA:W5(V549_D-1)->G:W-1(V652_D-1)
	adding edge: AGTCCACCAC...ACAAAGTAAA:W5(V549_D-1) to G:W-1(V652_D-1)
removing edge Edge(651->652,w:8.0)(A:W-1(V651_D-1)->G:W-1(V652_D-1))
removing edge Edge(549->651,w:8.0)(AGTCCACCAC...ACAAAGTAAA:W5(V549_D-1)->A:W-1(V651_D-1))
Found potential edge: Edge(549->652,w:8.0) between AGTCCACCAC...ACAAAGTAAA:W5(V549_D-1) and G:W-1(V652_D-1)
removing vertex G:W-1(V652_D-1) was concatenated into AGTCCACCAC...CAAAGTAAAG:W5(V549_D-1)
Want to move edge Edge(652->653,w:8.0)(G:W-1(V652_D-1)->A:W-1(V653_D-1)) to (AGTCCACCAC...CAAAGTAAAG:W5(V549_D-1)->A:W-1(V653_D-1)
	adding edge: AGTCCACCAC...CAAAGTAAAG:W5(V549_D-1) to A:W-1(V653_D-1)
removing edge Edge(652->653,w:8.0)(G:W-1(V652_D-1)->A:W-1(V653_D-1))
removing edge Edge(549->652,w:8.0)(AGTCCACCAC...CAAAGTAAAG:W5(V549_D-1)->G:W-1(V652_D-1))
Found potential edge: Edge(549->653,w:8.0) between AGTCCACCAC...CAAAGTAAAG:W5(V549_D-1) and A:W-1(V653_D-1)
removing vertex A:W-1(V653_D-1) was concatenated into AGTCCACCAC...AAAGTAAAGA:W5(V549_D-1)
Want to move edge Edge(653->654,w:8.0)(A:W-1(V653_D-1)->G:W-1(V654_D-1)) to (AGTCCACCAC...AAAGTAAAGA:W5(V549_D-1)->G:W-1(V654_D-1)
	adding edge: AGTCCACCAC...AAAGTAAAGA:W5(V549_D-1) to G:W-1(V654_D-1)
removing edge Edge(653->654,w:8.0)(A:W-1(V653_D-1)->G:W-1(V654_D-1))
removing edge Edge(549->653,w:8.0)(AGTCCACCAC...AAAGTAAAGA:W5(V549_D-1)->A:W-1(V653_D-1))
Found potential edge: Edge(549->654,w:8.0) between AGTCCACCAC...AAAGTAAAGA:W5(V549_D-1) and G:W-1(V654_D-1)
removing vertex G:W-1(V654_D-1) was concatenated into AGTCCACCAC...AAGTAAAGAG:W5(V549_D-1)
Want to move edge Edge(654->655,w:10.0)(G:W-1(V654_D-1)->G:W-1(V655_D-1)) to (AGTCCACCAC...AAGTAAAGAG:W5(V549_D-1)->G:W-1(V655_D-1)
	adding edge: AGTCCACCAC...AAGTAAAGAG:W5(V549_D-1) to G:W-1(V655_D-1)
removing edge Edge(654->655,w:10.0)(G:W-1(V654_D-1)->G:W-1(V655_D-1))
removing edge Edge(549->654,w:8.0)(AGTCCACCAC...AAGTAAAGAG:W5(V549_D-1)->G:W-1(V654_D-1))
Found potential edge: Edge(549->655,w:10.0) between AGTCCACCAC...AAGTAAAGAG:W5(V549_D-1) and G:W-1(V655_D-1)
removing vertex G:W-1(V655_D-1) was concatenated into AGTCCACCAC...AGTAAAGAGG:W5(V549_D-1)
Want to move edge Edge(655->656,w:10.0)(G:W-1(V655_D-1)->A:W-1(V656_D-1)) to (AGTCCACCAC...AGTAAAGAGG:W5(V549_D-1)->A:W-1(V656_D-1)
	adding edge: AGTCCACCAC...AGTAAAGAGG:W5(V549_D-1) to A:W-1(V656_D-1)
removing edge Edge(655->656,w:10.0)(G:W-1(V655_D-1)->A:W-1(V656_D-1))
removing edge Edge(549->655,w:10.0)(AGTCCACCAC...AGTAAAGAGG:W5(V549_D-1)->G:W-1(V655_D-1))
Found potential edge: Edge(549->656,w:10.0) between AGTCCACCAC...AGTAAAGAGG:W5(V549_D-1) and A:W-1(V656_D-1)
removing vertex A:W-1(V656_D-1) was concatenated into AGTCCACCAC...GTAAAGAGGA:W5(V549_D-1)
Want to move edge Edge(656->657,w:10.0)(A:W-1(V656_D-1)->T:W-1(V657_D-1)) to (AGTCCACCAC...GTAAAGAGGA:W5(V549_D-1)->T:W-1(V657_D-1)
	adding edge: AGTCCACCAC...GTAAAGAGGA:W5(V549_D-1) to T:W-1(V657_D-1)
removing edge Edge(656->657,w:10.0)(A:W-1(V656_D-1)->T:W-1(V657_D-1))
removing edge Edge(549->656,w:10.0)(AGTCCACCAC...GTAAAGAGGA:W5(V549_D-1)->A:W-1(V656_D-1))
Found potential edge: Edge(549->657,w:10.0) between AGTCCACCAC...GTAAAGAGGA:W5(V549_D-1) and T:W-1(V657_D-1)
removing vertex T:W-1(V657_D-1) was concatenated into AGTCCACCAC...TAAAGAGGAT:W5(V549_D-1)
Want to move edge Edge(657->658,w:12.0)(T:W-1(V657_D-1)->G:W-1(V658_D-1)) to (AGTCCACCAC...TAAAGAGGAT:W5(V549_D-1)->G:W-1(V658_D-1)
	adding edge: AGTCCACCAC...TAAAGAGGAT:W5(V549_D-1) to G:W-1(V658_D-1)
removing edge Edge(657->658,w:12.0)(T:W-1(V657_D-1)->G:W-1(V658_D-1))
removing edge Edge(549->657,w:10.0)(AGTCCACCAC...TAAAGAGGAT:W5(V549_D-1)->T:W-1(V657_D-1))
Found potential edge: Edge(549->658,w:12.0) between AGTCCACCAC...TAAAGAGGAT:W5(V549_D-1) and G:W-1(V658_D-1)
removing vertex G:W-1(V658_D-1) was concatenated into AGTCCACCAC...AAAGAGGATG:W5(V549_D-1)
Want to move edge Edge(658->659,w:10.0)(G:W-1(V658_D-1)->A:W-1(V659_D-1)) to (AGTCCACCAC...AAAGAGGATG:W5(V549_D-1)->A:W-1(V659_D-1)
	adding edge: AGTCCACCAC...AAAGAGGATG:W5(V549_D-1) to A:W-1(V659_D-1)
removing edge Edge(658->659,w:10.0)(G:W-1(V658_D-1)->A:W-1(V659_D-1))
removing edge Edge(549->658,w:12.0)(AGTCCACCAC...AAAGAGGATG:W5(V549_D-1)->G:W-1(V658_D-1))
Found potential edge: Edge(549->659,w:10.0) between AGTCCACCAC...AAAGAGGATG:W5(V549_D-1) and A:W-1(V659_D-1)
removing vertex A:W-1(V659_D-1) was concatenated into AGTCCACCAC...AAGAGGATGA:W5(V549_D-1)
Want to move edge Edge(659->660,w:10.0)(A:W-1(V659_D-1)->C:W-1(V660_D-1)) to (AGTCCACCAC...AAGAGGATGA:W5(V549_D-1)->C:W-1(V660_D-1)
	adding edge: AGTCCACCAC...AAGAGGATGA:W5(V549_D-1) to C:W-1(V660_D-1)
removing edge Edge(659->660,w:10.0)(A:W-1(V659_D-1)->C:W-1(V660_D-1))
removing edge Edge(549->659,w:10.0)(AGTCCACCAC...AAGAGGATGA:W5(V549_D-1)->A:W-1(V659_D-1))
Found potential edge: Edge(549->660,w:10.0) between AGTCCACCAC...AAGAGGATGA:W5(V549_D-1) and C:W-1(V660_D-1)
removing vertex C:W-1(V660_D-1) was concatenated into AGTCCACCAC...AGAGGATGAC:W5(V549_D-1)
Want to move edge Edge(660->661,w:10.0)(C:W-1(V660_D-1)->A:W-1(V661_D-1)) to (AGTCCACCAC...AGAGGATGAC:W5(V549_D-1)->A:W-1(V661_D-1)
	adding edge: AGTCCACCAC...AGAGGATGAC:W5(V549_D-1) to A:W-1(V661_D-1)
removing edge Edge(660->661,w:10.0)(C:W-1(V660_D-1)->A:W-1(V661_D-1))
removing edge Edge(549->660,w:10.0)(AGTCCACCAC...AGAGGATGAC:W5(V549_D-1)->C:W-1(V660_D-1))
Found potential edge: Edge(549->661,w:10.0) between AGTCCACCAC...AGAGGATGAC:W5(V549_D-1) and A:W-1(V661_D-1)
removing vertex A:W-1(V661_D-1) was concatenated into AGTCCACCAC...GAGGATGACA:W5(V549_D-1)
Want to move edge Edge(661->662,w:10.0)(A:W-1(V661_D-1)->G:W-1(V662_D-1)) to (AGTCCACCAC...GAGGATGACA:W5(V549_D-1)->G:W-1(V662_D-1)
	adding edge: AGTCCACCAC...GAGGATGACA:W5(V549_D-1) to G:W-1(V662_D-1)
removing edge Edge(661->662,w:10.0)(A:W-1(V661_D-1)->G:W-1(V662_D-1))
removing edge Edge(549->661,w:10.0)(AGTCCACCAC...GAGGATGACA:W5(V549_D-1)->A:W-1(V661_D-1))
Found potential edge: Edge(549->662,w:10.0) between AGTCCACCAC...GAGGATGACA:W5(V549_D-1) and G:W-1(V662_D-1)
removing vertex G:W-1(V662_D-1) was concatenated into AGTCCACCAC...AGGATGACAG:W5(V549_D-1)
Want to move edge Edge(662->663,w:10.0)(G:W-1(V662_D-1)->A:W-1(V663_D-1)) to (AGTCCACCAC...AGGATGACAG:W5(V549_D-1)->A:W-1(V663_D-1)
	adding edge: AGTCCACCAC...AGGATGACAG:W5(V549_D-1) to A:W-1(V663_D-1)
removing edge Edge(662->663,w:10.0)(G:W-1(V662_D-1)->A:W-1(V663_D-1))
removing edge Edge(549->662,w:10.0)(AGTCCACCAC...AGGATGACAG:W5(V549_D-1)->G:W-1(V662_D-1))
Found potential edge: Edge(549->663,w:10.0) between AGTCCACCAC...AGGATGACAG:W5(V549_D-1) and A:W-1(V663_D-1)
removing vertex A:W-1(V663_D-1) was concatenated into AGTCCACCAC...GGATGACAGA:W5(V549_D-1)
Want to move edge Edge(663->664,w:10.0)(A:W-1(V663_D-1)->C:W-1(V664_D-1)) to (AGTCCACCAC...GGATGACAGA:W5(V549_D-1)->C:W-1(V664_D-1)
	adding edge: AGTCCACCAC...GGATGACAGA:W5(V549_D-1) to C:W-1(V664_D-1)
removing edge Edge(663->664,w:10.0)(A:W-1(V663_D-1)->C:W-1(V664_D-1))
removing edge Edge(549->663,w:10.0)(AGTCCACCAC...GGATGACAGA:W5(V549_D-1)->A:W-1(V663_D-1))
Found potential edge: Edge(549->664,w:10.0) between AGTCCACCAC...GGATGACAGA:W5(V549_D-1) and C:W-1(V664_D-1)
removing vertex C:W-1(V664_D-1) was concatenated into AGTCCACCAC...GATGACAGAC:W5(V549_D-1)
Want to move edge Edge(664->665,w:8.0)(C:W-1(V664_D-1)->T:W-1(V665_D-1)) to (AGTCCACCAC...GATGACAGAC:W5(V549_D-1)->T:W-1(V665_D-1)
	adding edge: AGTCCACCAC...GATGACAGAC:W5(V549_D-1) to T:W-1(V665_D-1)
removing edge Edge(664->665,w:8.0)(C:W-1(V664_D-1)->T:W-1(V665_D-1))
removing edge Edge(549->664,w:10.0)(AGTCCACCAC...GATGACAGAC:W5(V549_D-1)->C:W-1(V664_D-1))
Found potential edge: Edge(549->665,w:8.0) between AGTCCACCAC...GATGACAGAC:W5(V549_D-1) and T:W-1(V665_D-1)
removing vertex T:W-1(V665_D-1) was concatenated into AGTCCACCAC...ATGACAGACT:W5(V549_D-1)
Want to move edge Edge(665->666,w:8.0)(T:W-1(V665_D-1)->C:W-1(V666_D-1)) to (AGTCCACCAC...ATGACAGACT:W5(V549_D-1)->C:W-1(V666_D-1)
	adding edge: AGTCCACCAC...ATGACAGACT:W5(V549_D-1) to C:W-1(V666_D-1)
removing edge Edge(665->666,w:8.0)(T:W-1(V665_D-1)->C:W-1(V666_D-1))
removing edge Edge(549->665,w:8.0)(AGTCCACCAC...ATGACAGACT:W5(V549_D-1)->T:W-1(V665_D-1))
Found potential edge: Edge(549->666,w:8.0) between AGTCCACCAC...ATGACAGACT:W5(V549_D-1) and C:W-1(V666_D-1)
removing vertex C:W-1(V666_D-1) was concatenated into AGTCCACCAC...TGACAGACTC:W5(V549_D-1)
Want to move edge Edge(666->667,w:8.0)(C:W-1(V666_D-1)->T:W-1(V667_D-1)) to (AGTCCACCAC...TGACAGACTC:W5(V549_D-1)->T:W-1(V667_D-1)
	adding edge: AGTCCACCAC...TGACAGACTC:W5(V549_D-1) to T:W-1(V667_D-1)
removing edge Edge(666->667,w:8.0)(C:W-1(V666_D-1)->T:W-1(V667_D-1))
removing edge Edge(549->666,w:8.0)(AGTCCACCAC...TGACAGACTC:W5(V549_D-1)->C:W-1(V666_D-1))
Found potential edge: Edge(549->667,w:8.0) between AGTCCACCAC...TGACAGACTC:W5(V549_D-1) and T:W-1(V667_D-1)
removing vertex T:W-1(V667_D-1) was concatenated into AGTCCACCAC...GACAGACTCT:W5(V549_D-1)
Want to move edge Edge(667->668,w:8.0)(T:W-1(V667_D-1)->C:W-1(V668_D-1)) to (AGTCCACCAC...GACAGACTCT:W5(V549_D-1)->C:W-1(V668_D-1)
	adding edge: AGTCCACCAC...GACAGACTCT:W5(V549_D-1) to C:W-1(V668_D-1)
removing edge Edge(667->668,w:8.0)(T:W-1(V667_D-1)->C:W-1(V668_D-1))
removing edge Edge(549->667,w:8.0)(AGTCCACCAC...GACAGACTCT:W5(V549_D-1)->T:W-1(V667_D-1))
Found potential edge: Edge(549->668,w:8.0) between AGTCCACCAC...GACAGACTCT:W5(V549_D-1) and C:W-1(V668_D-1)
removing vertex C:W-1(V668_D-1) was concatenated into AGTCCACCAC...ACAGACTCTC:W5(V549_D-1)
Want to move edge Edge(668->669,w:8.0)(C:W-1(V668_D-1)->T:W-1(V669_D-1)) to (AGTCCACCAC...ACAGACTCTC:W5(V549_D-1)->T:W-1(V669_D-1)
	adding edge: AGTCCACCAC...ACAGACTCTC:W5(V549_D-1) to T:W-1(V669_D-1)
removing edge Edge(668->669,w:8.0)(C:W-1(V668_D-1)->T:W-1(V669_D-1))
removing edge Edge(549->668,w:8.0)(AGTCCACCAC...ACAGACTCTC:W5(V549_D-1)->C:W-1(V668_D-1))
Found potential edge: Edge(549->669,w:8.0) between AGTCCACCAC...ACAGACTCTC:W5(V549_D-1) and T:W-1(V669_D-1)
removing vertex T:W-1(V669_D-1) was concatenated into AGTCCACCAC...CAGACTCTCT:W5(V549_D-1)
Want to move edge Edge(669->670,w:8.0)(T:W-1(V669_D-1)->A:W-1(V670_D-1)) to (AGTCCACCAC...CAGACTCTCT:W5(V549_D-1)->A:W-1(V670_D-1)
	adding edge: AGTCCACCAC...CAGACTCTCT:W5(V549_D-1) to A:W-1(V670_D-1)
removing edge Edge(669->670,w:8.0)(T:W-1(V669_D-1)->A:W-1(V670_D-1))
removing edge Edge(549->669,w:8.0)(AGTCCACCAC...CAGACTCTCT:W5(V549_D-1)->T:W-1(V669_D-1))
Found potential edge: Edge(549->670,w:8.0) between AGTCCACCAC...CAGACTCTCT:W5(V549_D-1) and A:W-1(V670_D-1)
removing vertex A:W-1(V670_D-1) was concatenated into AGTCCACCAC...AGACTCTCTA:W5(V549_D-1)
Want to move edge Edge(670->671,w:8.0)(A:W-1(V670_D-1)->A:W-1(V671_D-1)) to (AGTCCACCAC...AGACTCTCTA:W5(V549_D-1)->A:W-1(V671_D-1)
	adding edge: AGTCCACCAC...AGACTCTCTA:W5(V549_D-1) to A:W-1(V671_D-1)
removing edge Edge(670->671,w:8.0)(A:W-1(V670_D-1)->A:W-1(V671_D-1))
removing edge Edge(549->670,w:8.0)(AGTCCACCAC...AGACTCTCTA:W5(V549_D-1)->A:W-1(V670_D-1))
Found potential edge: Edge(549->671,w:8.0) between AGTCCACCAC...AGACTCTCTA:W5(V549_D-1) and A:W-1(V671_D-1)
removing vertex A:W-1(V671_D-1) was concatenated into AGTCCACCAC...GACTCTCTAA:W5(V549_D-1)
Want to move edge Edge(671->672,w:8.0)(A:W-1(V671_D-1)->G:W-1(V672_D-1)) to (AGTCCACCAC...GACTCTCTAA:W5(V549_D-1)->G:W-1(V672_D-1)
	adding edge: AGTCCACCAC...GACTCTCTAA:W5(V549_D-1) to G:W-1(V672_D-1)
removing edge Edge(671->672,w:8.0)(A:W-1(V671_D-1)->G:W-1(V672_D-1))
removing edge Edge(549->671,w:8.0)(AGTCCACCAC...GACTCTCTAA:W5(V549_D-1)->A:W-1(V671_D-1))
Found potential edge: Edge(549->672,w:8.0) between AGTCCACCAC...GACTCTCTAA:W5(V549_D-1) and G:W-1(V672_D-1)
removing vertex G:W-1(V672_D-1) was concatenated into AGTCCACCAC...ACTCTCTAAG:W5(V549_D-1)
Want to move edge Edge(672->673,w:8.0)(G:W-1(V672_D-1)->G:W-1(V673_D-1)) to (AGTCCACCAC...ACTCTCTAAG:W5(V549_D-1)->G:W-1(V673_D-1)
	adding edge: AGTCCACCAC...ACTCTCTAAG:W5(V549_D-1) to G:W-1(V673_D-1)
removing edge Edge(672->673,w:8.0)(G:W-1(V672_D-1)->G:W-1(V673_D-1))
removing edge Edge(549->672,w:8.0)(AGTCCACCAC...ACTCTCTAAG:W5(V549_D-1)->G:W-1(V672_D-1))
Found potential edge: Edge(549->673,w:8.0) between AGTCCACCAC...ACTCTCTAAG:W5(V549_D-1) and G:W-1(V673_D-1)
removing vertex G:W-1(V673_D-1) was concatenated into AGTCCACCAC...CTCTCTAAGG:W5(V549_D-1)
Want to move edge Edge(673->674,w:8.0)(G:W-1(V673_D-1)->G:W-1(V674_D-1)) to (AGTCCACCAC...CTCTCTAAGG:W5(V549_D-1)->G:W-1(V674_D-1)
	adding edge: AGTCCACCAC...CTCTCTAAGG:W5(V549_D-1) to G:W-1(V674_D-1)
removing edge Edge(673->674,w:8.0)(G:W-1(V673_D-1)->G:W-1(V674_D-1))
removing edge Edge(549->673,w:8.0)(AGTCCACCAC...CTCTCTAAGG:W5(V549_D-1)->G:W-1(V673_D-1))
Found potential edge: Edge(549->674,w:8.0) between AGTCCACCAC...CTCTCTAAGG:W5(V549_D-1) and G:W-1(V674_D-1)
removing vertex G:W-1(V674_D-1) was concatenated into AGTCCACCAC...TCTCTAAGGG:W5(V549_D-1)
Want to move edge Edge(674->675,w:8.0)(G:W-1(V674_D-1)->A:W-1(V675_D-1)) to (AGTCCACCAC...TCTCTAAGGG:W5(V549_D-1)->A:W-1(V675_D-1)
	adding edge: AGTCCACCAC...TCTCTAAGGG:W5(V549_D-1) to A:W-1(V675_D-1)
removing edge Edge(674->675,w:8.0)(G:W-1(V674_D-1)->A:W-1(V675_D-1))
removing edge Edge(549->674,w:8.0)(AGTCCACCAC...TCTCTAAGGG:W5(V549_D-1)->G:W-1(V674_D-1))
Found potential edge: Edge(549->675,w:8.0) between AGTCCACCAC...TCTCTAAGGG:W5(V549_D-1) and A:W-1(V675_D-1)
removing vertex A:W-1(V675_D-1) was concatenated into AGTCCACCAC...CTCTAAGGGA:W5(V549_D-1)
Want to move edge Edge(675->676,w:8.0)(A:W-1(V675_D-1)->C:W-1(V676_D-1)) to (AGTCCACCAC...CTCTAAGGGA:W5(V549_D-1)->C:W-1(V676_D-1)
	adding edge: AGTCCACCAC...CTCTAAGGGA:W5(V549_D-1) to C:W-1(V676_D-1)
removing edge Edge(675->676,w:8.0)(A:W-1(V675_D-1)->C:W-1(V676_D-1))
removing edge Edge(549->675,w:8.0)(AGTCCACCAC...CTCTAAGGGA:W5(V549_D-1)->A:W-1(V675_D-1))
Found potential edge: Edge(549->676,w:8.0) between AGTCCACCAC...CTCTAAGGGA:W5(V549_D-1) and C:W-1(V676_D-1)
removing vertex C:W-1(V676_D-1) was concatenated into AGTCCACCAC...TCTAAGGGAC:W5(V549_D-1)
Want to move edge Edge(676->677,w:8.0)(C:W-1(V676_D-1)->A:W-1(V677_D-1)) to (AGTCCACCAC...TCTAAGGGAC:W5(V549_D-1)->A:W-1(V677_D-1)
	adding edge: AGTCCACCAC...TCTAAGGGAC:W5(V549_D-1) to A:W-1(V677_D-1)
removing edge Edge(676->677,w:8.0)(C:W-1(V676_D-1)->A:W-1(V677_D-1))
removing edge Edge(549->676,w:8.0)(AGTCCACCAC...TCTAAGGGAC:W5(V549_D-1)->C:W-1(V676_D-1))
Found potential edge: Edge(549->677,w:8.0) between AGTCCACCAC...TCTAAGGGAC:W5(V549_D-1) and A:W-1(V677_D-1)
removing vertex A:W-1(V677_D-1) was concatenated into AGTCCACCAC...CTAAGGGACA:W5(V549_D-1)
Want to move edge Edge(677->678,w:8.0)(A:W-1(V677_D-1)->T:W-1(V678_D-1)) to (AGTCCACCAC...CTAAGGGACA:W5(V549_D-1)->T:W-1(V678_D-1)
	adding edge: AGTCCACCAC...CTAAGGGACA:W5(V549_D-1) to T:W-1(V678_D-1)
removing edge Edge(677->678,w:8.0)(A:W-1(V677_D-1)->T:W-1(V678_D-1))
removing edge Edge(549->677,w:8.0)(AGTCCACCAC...CTAAGGGACA:W5(V549_D-1)->A:W-1(V677_D-1))
Found potential edge: Edge(549->678,w:8.0) between AGTCCACCAC...CTAAGGGACA:W5(V549_D-1) and T:W-1(V678_D-1)
removing vertex T:W-1(V678_D-1) was concatenated into AGTCCACCAC...TAAGGGACAT:W5(V549_D-1)
Want to move edge Edge(678->679,w:8.0)(T:W-1(V678_D-1)->A:W-1(V679_D-1)) to (AGTCCACCAC...TAAGGGACAT:W5(V549_D-1)->A:W-1(V679_D-1)
	adding edge: AGTCCACCAC...TAAGGGACAT:W5(V549_D-1) to A:W-1(V679_D-1)
removing edge Edge(678->679,w:8.0)(T:W-1(V678_D-1)->A:W-1(V679_D-1))
removing edge Edge(549->678,w:8.0)(AGTCCACCAC...TAAGGGACAT:W5(V549_D-1)->T:W-1(V678_D-1))
Found potential edge: Edge(549->679,w:8.0) between AGTCCACCAC...TAAGGGACAT:W5(V549_D-1) and A:W-1(V679_D-1)
removing vertex A:W-1(V679_D-1) was concatenated into AGTCCACCAC...AAGGGACATA:W5(V549_D-1)
Want to move edge Edge(679->680,w:8.0)(A:W-1(V679_D-1)->T:W-1(V680_D-1)) to (AGTCCACCAC...AAGGGACATA:W5(V549_D-1)->T:W-1(V680_D-1)
	adding edge: AGTCCACCAC...AAGGGACATA:W5(V549_D-1) to T:W-1(V680_D-1)
removing edge Edge(679->680,w:8.0)(A:W-1(V679_D-1)->T:W-1(V680_D-1))
removing edge Edge(549->679,w:8.0)(AGTCCACCAC...AAGGGACATA:W5(V549_D-1)->A:W-1(V679_D-1))
Found potential edge: Edge(549->680,w:8.0) between AGTCCACCAC...AAGGGACATA:W5(V549_D-1) and T:W-1(V680_D-1)
removing vertex T:W-1(V680_D-1) was concatenated into AGTCCACCAC...AGGGACATAT:W5(V549_D-1)
Want to move edge Edge(680->681,w:10.0)(T:W-1(V680_D-1)->G:W-1(V681_D-1)) to (AGTCCACCAC...AGGGACATAT:W5(V549_D-1)->G:W-1(V681_D-1)
	adding edge: AGTCCACCAC...AGGGACATAT:W5(V549_D-1) to G:W-1(V681_D-1)
removing edge Edge(680->681,w:10.0)(T:W-1(V680_D-1)->G:W-1(V681_D-1))
removing edge Edge(549->680,w:8.0)(AGTCCACCAC...AGGGACATAT:W5(V549_D-1)->T:W-1(V680_D-1))
Found potential edge: Edge(549->681,w:10.0) between AGTCCACCAC...AGGGACATAT:W5(V549_D-1) and G:W-1(V681_D-1)
removing vertex G:W-1(V681_D-1) was concatenated into AGTCCACCAC...GGGACATATG:W6(V549_D-1)
Want to move edge Edge(681->682,w:10.0)(G:W-1(V681_D-1)->G:W-1(V682_D-1)) to (AGTCCACCAC...GGGACATATG:W6(V549_D-1)->G:W-1(V682_D-1)
	adding edge: AGTCCACCAC...GGGACATATG:W6(V549_D-1) to G:W-1(V682_D-1)
removing edge Edge(681->682,w:10.0)(G:W-1(V681_D-1)->G:W-1(V682_D-1))
removing edge Edge(549->681,w:10.0)(AGTCCACCAC...GGGACATATG:W6(V549_D-1)->G:W-1(V681_D-1))
Found potential edge: Edge(549->682,w:10.0) between AGTCCACCAC...GGGACATATG:W6(V549_D-1) and G:W-1(V682_D-1)
removing vertex G:W-1(V682_D-1) was concatenated into AGTCCACCAC...GGACATATGG:W6(V549_D-1)
Want to move edge Edge(682->683,w:10.0)(G:W-1(V682_D-1)->G:W-1(V683_D-1)) to (AGTCCACCAC...GGACATATGG:W6(V549_D-1)->G:W-1(V683_D-1)
	adding edge: AGTCCACCAC...GGACATATGG:W6(V549_D-1) to G:W-1(V683_D-1)
removing edge Edge(682->683,w:10.0)(G:W-1(V682_D-1)->G:W-1(V683_D-1))
removing edge Edge(549->682,w:10.0)(AGTCCACCAC...GGACATATGG:W6(V549_D-1)->G:W-1(V682_D-1))
Found potential edge: Edge(549->683,w:10.0) between AGTCCACCAC...GGACATATGG:W6(V549_D-1) and G:W-1(V683_D-1)
removing vertex G:W-1(V683_D-1) was concatenated into AGTCCACCAC...GACATATGGG:W6(V549_D-1)
Want to move edge Edge(683->684,w:8.0)(G:W-1(V683_D-1)->A:W-1(V684_D-1)) to (AGTCCACCAC...GACATATGGG:W6(V549_D-1)->A:W-1(V684_D-1)
	adding edge: AGTCCACCAC...GACATATGGG:W6(V549_D-1) to A:W-1(V684_D-1)
removing edge Edge(683->684,w:8.0)(G:W-1(V683_D-1)->A:W-1(V684_D-1))
removing edge Edge(549->683,w:10.0)(AGTCCACCAC...GACATATGGG:W6(V549_D-1)->G:W-1(V683_D-1))
Found potential edge: Edge(549->684,w:8.0) between AGTCCACCAC...GACATATGGG:W6(V549_D-1) and A:W-1(V684_D-1)
removing vertex A:W-1(V684_D-1) was concatenated into AGTCCACCAC...ACATATGGGA:W6(V549_D-1)
Want to move edge Edge(684->685,w:8.0)(A:W-1(V684_D-1)->G:W-1(V685_D-1)) to (AGTCCACCAC...ACATATGGGA:W6(V549_D-1)->G:W-1(V685_D-1)
	adding edge: AGTCCACCAC...ACATATGGGA:W6(V549_D-1) to G:W-1(V685_D-1)
removing edge Edge(684->685,w:8.0)(A:W-1(V684_D-1)->G:W-1(V685_D-1))
removing edge Edge(549->684,w:8.0)(AGTCCACCAC...ACATATGGGA:W6(V549_D-1)->A:W-1(V684_D-1))
Found potential edge: Edge(549->685,w:8.0) between AGTCCACCAC...ACATATGGGA:W6(V549_D-1) and G:W-1(V685_D-1)
removing vertex G:W-1(V685_D-1) was concatenated into AGTCCACCAC...CATATGGGAG:W6(V549_D-1)
Want to move edge Edge(685->686,w:8.0)(G:W-1(V685_D-1)->C:W-1(V686_D-1)) to (AGTCCACCAC...CATATGGGAG:W6(V549_D-1)->C:W-1(V686_D-1)
	adding edge: AGTCCACCAC...CATATGGGAG:W6(V549_D-1) to C:W-1(V686_D-1)
removing edge Edge(685->686,w:8.0)(G:W-1(V685_D-1)->C:W-1(V686_D-1))
removing edge Edge(549->685,w:8.0)(AGTCCACCAC...CATATGGGAG:W6(V549_D-1)->G:W-1(V685_D-1))
Found potential edge: Edge(549->686,w:8.0) between AGTCCACCAC...CATATGGGAG:W6(V549_D-1) and C:W-1(V686_D-1)
removing vertex C:W-1(V686_D-1) was concatenated into AGTCCACCAC...ATATGGGAGC:W6(V549_D-1)
Want to move edge Edge(686->687,w:8.0)(C:W-1(V686_D-1)->T:W-1(V687_D-1)) to (AGTCCACCAC...ATATGGGAGC:W6(V549_D-1)->T:W-1(V687_D-1)
	adding edge: AGTCCACCAC...ATATGGGAGC:W6(V549_D-1) to T:W-1(V687_D-1)
removing edge Edge(686->687,w:8.0)(C:W-1(V686_D-1)->T:W-1(V687_D-1))
removing edge Edge(549->686,w:8.0)(AGTCCACCAC...ATATGGGAGC:W6(V549_D-1)->C:W-1(V686_D-1))
Found potential edge: Edge(549->687,w:8.0) between AGTCCACCAC...ATATGGGAGC:W6(V549_D-1) and T:W-1(V687_D-1)
removing vertex T:W-1(V687_D-1) was concatenated into AGTCCACCAC...TATGGGAGCT:W6(V549_D-1)
Want to move edge Edge(687->688,w:8.0)(T:W-1(V687_D-1)->A:W-1(V688_D-1)) to (AGTCCACCAC...TATGGGAGCT:W6(V549_D-1)->A:W-1(V688_D-1)
	adding edge: AGTCCACCAC...TATGGGAGCT:W6(V549_D-1) to A:W-1(V688_D-1)
removing edge Edge(687->688,w:8.0)(T:W-1(V687_D-1)->A:W-1(V688_D-1))
removing edge Edge(549->687,w:8.0)(AGTCCACCAC...TATGGGAGCT:W6(V549_D-1)->T:W-1(V687_D-1))
Found potential edge: Edge(549->688,w:8.0) between AGTCCACCAC...TATGGGAGCT:W6(V549_D-1) and A:W-1(V688_D-1)
removing vertex A:W-1(V688_D-1) was concatenated into AGTCCACCAC...ATGGGAGCTA:W6(V549_D-1)
Want to move edge Edge(688->689,w:6.0)(A:W-1(V688_D-1)->C:W-1(V689_D-1)) to (AGTCCACCAC...ATGGGAGCTA:W6(V549_D-1)->C:W-1(V689_D-1)
	adding edge: AGTCCACCAC...ATGGGAGCTA:W6(V549_D-1) to C:W-1(V689_D-1)
removing edge Edge(688->689,w:6.0)(A:W-1(V688_D-1)->C:W-1(V689_D-1))
removing edge Edge(549->688,w:8.0)(AGTCCACCAC...ATGGGAGCTA:W6(V549_D-1)->A:W-1(V688_D-1))
Found potential edge: Edge(549->689,w:6.0) between AGTCCACCAC...ATGGGAGCTA:W6(V549_D-1) and C:W-1(V689_D-1)
removing vertex C:W-1(V689_D-1) was concatenated into AGTCCACCAC...TGGGAGCTAC:W6(V549_D-1)
Want to move edge Edge(689->690,w:6.0)(C:W-1(V689_D-1)->A:W-1(V690_D-1)) to (AGTCCACCAC...TGGGAGCTAC:W6(V549_D-1)->A:W-1(V690_D-1)
	adding edge: AGTCCACCAC...TGGGAGCTAC:W6(V549_D-1) to A:W-1(V690_D-1)
removing edge Edge(689->690,w:6.0)(C:W-1(V689_D-1)->A:W-1(V690_D-1))
removing edge Edge(549->689,w:6.0)(AGTCCACCAC...TGGGAGCTAC:W6(V549_D-1)->C:W-1(V689_D-1))
Found potential edge: Edge(549->690,w:6.0) between AGTCCACCAC...TGGGAGCTAC:W6(V549_D-1) and A:W-1(V690_D-1)
removing vertex A:W-1(V690_D-1) was concatenated into AGTCCACCAC...GGGAGCTACA:W6(V549_D-1)
Want to move edge Edge(690->691,w:6.0)(A:W-1(V690_D-1)->T:W-1(V691_D-1)) to (AGTCCACCAC...GGGAGCTACA:W6(V549_D-1)->T:W-1(V691_D-1)
	adding edge: AGTCCACCAC...GGGAGCTACA:W6(V549_D-1) to T:W-1(V691_D-1)
removing edge Edge(690->691,w:6.0)(A:W-1(V690_D-1)->T:W-1(V691_D-1))
removing edge Edge(549->690,w:6.0)(AGTCCACCAC...GGGAGCTACA:W6(V549_D-1)->A:W-1(V690_D-1))
Found potential edge: Edge(549->691,w:6.0) between AGTCCACCAC...GGGAGCTACA:W6(V549_D-1) and T:W-1(V691_D-1)
removing vertex T:W-1(V691_D-1) was concatenated into AGTCCACCAC...GGAGCTACAT:W6(V549_D-1)
Want to move edge Edge(691->692,w:4.0)(T:W-1(V691_D-1)->A:W-1(V692_D-1)) to (AGTCCACCAC...GGAGCTACAT:W6(V549_D-1)->A:W-1(V692_D-1)
	adding edge: AGTCCACCAC...GGAGCTACAT:W6(V549_D-1) to A:W-1(V692_D-1)
removing edge Edge(691->692,w:4.0)(T:W-1(V691_D-1)->A:W-1(V692_D-1))
removing edge Edge(549->691,w:6.0)(AGTCCACCAC...GGAGCTACAT:W6(V549_D-1)->T:W-1(V691_D-1))
Found potential edge: Edge(549->692,w:4.0) between AGTCCACCAC...GGAGCTACAT:W6(V549_D-1) and A:W-1(V692_D-1)
removing vertex A:W-1(V692_D-1) was concatenated into AGTCCACCAC...GAGCTACATA:W6(V549_D-1)
Want to move edge Edge(692->693,w:4.0)(A:W-1(V692_D-1)->G:W-1(V693_D-1)) to (AGTCCACCAC...GAGCTACATA:W6(V549_D-1)->G:W-1(V693_D-1)
	adding edge: AGTCCACCAC...GAGCTACATA:W6(V549_D-1) to G:W-1(V693_D-1)
removing edge Edge(692->693,w:4.0)(A:W-1(V692_D-1)->G:W-1(V693_D-1))
removing edge Edge(549->692,w:4.0)(AGTCCACCAC...GAGCTACATA:W6(V549_D-1)->A:W-1(V692_D-1))
Found potential edge: Edge(549->693,w:4.0) between AGTCCACCAC...GAGCTACATA:W6(V549_D-1) and G:W-1(V693_D-1)
removing vertex G:W-1(V693_D-1) was concatenated into AGTCCACCAC...AGCTACATAG:W6(V549_D-1)
Want to move edge Edge(693->694,w:4.0)(G:W-1(V693_D-1)->C:W-1(V694_D-1)) to (AGTCCACCAC...AGCTACATAG:W6(V549_D-1)->C:W-1(V694_D-1)
	adding edge: AGTCCACCAC...AGCTACATAG:W6(V549_D-1) to C:W-1(V694_D-1)
removing edge Edge(693->694,w:4.0)(G:W-1(V693_D-1)->C:W-1(V694_D-1))
removing edge Edge(549->693,w:4.0)(AGTCCACCAC...AGCTACATAG:W6(V549_D-1)->G:W-1(V693_D-1))
Found potential edge: Edge(549->694,w:4.0) between AGTCCACCAC...AGCTACATAG:W6(V549_D-1) and C:W-1(V694_D-1)
removing vertex C:W-1(V694_D-1) was concatenated into AGTCCACCAC...GCTACATAGC:W6(V549_D-1)
Want to move edge Edge(694->695,w:4.0)(C:W-1(V694_D-1)->C:W-1(V695_D-1)) to (AGTCCACCAC...GCTACATAGC:W6(V549_D-1)->C:W-1(V695_D-1)
	adding edge: AGTCCACCAC...GCTACATAGC:W6(V549_D-1) to C:W-1(V695_D-1)
removing edge Edge(694->695,w:4.0)(C:W-1(V694_D-1)->C:W-1(V695_D-1))
removing edge Edge(549->694,w:4.0)(AGTCCACCAC...GCTACATAGC:W6(V549_D-1)->C:W-1(V694_D-1))
Found potential edge: Edge(549->695,w:4.0) between AGTCCACCAC...GCTACATAGC:W6(V549_D-1) and C:W-1(V695_D-1)
removing vertex C:W-1(V695_D-1) was concatenated into AGTCCACCAC...CTACATAGCC:W6(V549_D-1)
Want to move edge Edge(695->696,w:4.0)(C:W-1(V695_D-1)->A:W-1(V696_D-1)) to (AGTCCACCAC...CTACATAGCC:W6(V549_D-1)->A:W-1(V696_D-1)
	adding edge: AGTCCACCAC...CTACATAGCC:W6(V549_D-1) to A:W-1(V696_D-1)
removing edge Edge(695->696,w:4.0)(C:W-1(V695_D-1)->A:W-1(V696_D-1))
removing edge Edge(549->695,w:4.0)(AGTCCACCAC...CTACATAGCC:W6(V549_D-1)->C:W-1(V695_D-1))
Found potential edge: Edge(549->696,w:4.0) between AGTCCACCAC...CTACATAGCC:W6(V549_D-1) and A:W-1(V696_D-1)
removing vertex A:W-1(V696_D-1) was concatenated into AGTCCACCAC...TACATAGCCA:W6(V549_D-1)
Want to move edge Edge(696->697,w:6.0)(A:W-1(V696_D-1)->G:W-1(V697_D-1)) to (AGTCCACCAC...TACATAGCCA:W6(V549_D-1)->G:W-1(V697_D-1)
	adding edge: AGTCCACCAC...TACATAGCCA:W6(V549_D-1) to G:W-1(V697_D-1)
removing edge Edge(696->697,w:6.0)(A:W-1(V696_D-1)->G:W-1(V697_D-1))
removing edge Edge(549->696,w:4.0)(AGTCCACCAC...TACATAGCCA:W6(V549_D-1)->A:W-1(V696_D-1))
Found potential edge: Edge(549->697,w:6.0) between AGTCCACCAC...TACATAGCCA:W6(V549_D-1) and G:W-1(V697_D-1)
removing vertex G:W-1(V697_D-1) was concatenated into AGTCCACCAC...ACATAGCCAG:W6(V549_D-1)
Want to move edge Edge(697->698,w:6.0)(G:W-1(V697_D-1)->C:W-1(V698_D-1)) to (AGTCCACCAC...ACATAGCCAG:W6(V549_D-1)->C:W-1(V698_D-1)
	adding edge: AGTCCACCAC...ACATAGCCAG:W6(V549_D-1) to C:W-1(V698_D-1)
removing edge Edge(697->698,w:6.0)(G:W-1(V697_D-1)->C:W-1(V698_D-1))
removing edge Edge(549->697,w:6.0)(AGTCCACCAC...ACATAGCCAG:W6(V549_D-1)->G:W-1(V697_D-1))
Found potential edge: Edge(549->698,w:6.0) between AGTCCACCAC...ACATAGCCAG:W6(V549_D-1) and C:W-1(V698_D-1)
removing vertex C:W-1(V698_D-1) was concatenated into AGTCCACCAC...CATAGCCAGC:W6(V549_D-1)
Want to move edge Edge(698->699,w:6.0)(C:W-1(V698_D-1)->C:W-1(V699_D-1)) to (AGTCCACCAC...CATAGCCAGC:W6(V549_D-1)->C:W-1(V699_D-1)
	adding edge: AGTCCACCAC...CATAGCCAGC:W6(V549_D-1) to C:W-1(V699_D-1)
removing edge Edge(698->699,w:6.0)(C:W-1(V698_D-1)->C:W-1(V699_D-1))
removing edge Edge(549->698,w:6.0)(AGTCCACCAC...CATAGCCAGC:W6(V549_D-1)->C:W-1(V698_D-1))
Found potential edge: Edge(549->699,w:6.0) between AGTCCACCAC...CATAGCCAGC:W6(V549_D-1) and C:W-1(V699_D-1)
removing vertex C:W-1(V699_D-1) was concatenated into AGTCCACCAC...ATAGCCAGCC:W6(V549_D-1)
Want to move edge Edge(699->700,w:6.0)(C:W-1(V699_D-1)->C:W-1(V700_D-1)) to (AGTCCACCAC...ATAGCCAGCC:W6(V549_D-1)->C:W-1(V700_D-1)
	adding edge: AGTCCACCAC...ATAGCCAGCC:W6(V549_D-1) to C:W-1(V700_D-1)
removing edge Edge(699->700,w:6.0)(C:W-1(V699_D-1)->C:W-1(V700_D-1))
removing edge Edge(549->699,w:6.0)(AGTCCACCAC...ATAGCCAGCC:W6(V549_D-1)->C:W-1(V699_D-1))
Found potential edge: Edge(549->700,w:6.0) between AGTCCACCAC...ATAGCCAGCC:W6(V549_D-1) and C:W-1(V700_D-1)
removing vertex C:W-1(V700_D-1) was concatenated into AGTCCACCAC...TAGCCAGCCC:W6(V549_D-1)
Want to move edge Edge(700->701,w:6.0)(C:W-1(V700_D-1)->C:W-1(V701_D-1)) to (AGTCCACCAC...TAGCCAGCCC:W6(V549_D-1)->C:W-1(V701_D-1)
	adding edge: AGTCCACCAC...TAGCCAGCCC:W6(V549_D-1) to C:W-1(V701_D-1)
removing edge Edge(700->701,w:6.0)(C:W-1(V700_D-1)->C:W-1(V701_D-1))
removing edge Edge(549->700,w:6.0)(AGTCCACCAC...TAGCCAGCCC:W6(V549_D-1)->C:W-1(V700_D-1))
Found potential edge: Edge(549->701,w:6.0) between AGTCCACCAC...TAGCCAGCCC:W6(V549_D-1) and C:W-1(V701_D-1)
removing vertex C:W-1(V701_D-1) was concatenated into AGTCCACCAC...AGCCAGCCCC:W6(V549_D-1)
Want to move edge Edge(701->702,w:6.0)(C:W-1(V701_D-1)->G:W-1(V702_D-1)) to (AGTCCACCAC...AGCCAGCCCC:W6(V549_D-1)->G:W-1(V702_D-1)
	adding edge: AGTCCACCAC...AGCCAGCCCC:W6(V549_D-1) to G:W-1(V702_D-1)
removing edge Edge(701->702,w:6.0)(C:W-1(V701_D-1)->G:W-1(V702_D-1))
removing edge Edge(549->701,w:6.0)(AGTCCACCAC...AGCCAGCCCC:W6(V549_D-1)->C:W-1(V701_D-1))
Found potential edge: Edge(549->702,w:6.0) between AGTCCACCAC...AGCCAGCCCC:W6(V549_D-1) and G:W-1(V702_D-1)
removing vertex G:W-1(V702_D-1) was concatenated into AGTCCACCAC...GCCAGCCCCG:W6(V549_D-1)
Want to move edge Edge(702->703,w:6.0)(G:W-1(V702_D-1)->T:W-1(V703_D-1)) to (AGTCCACCAC...GCCAGCCCCG:W6(V549_D-1)->T:W-1(V703_D-1)
	adding edge: AGTCCACCAC...GCCAGCCCCG:W6(V549_D-1) to T:W-1(V703_D-1)
removing edge Edge(702->703,w:6.0)(G:W-1(V702_D-1)->T:W-1(V703_D-1))
removing edge Edge(549->702,w:6.0)(AGTCCACCAC...GCCAGCCCCG:W6(V549_D-1)->G:W-1(V702_D-1))
Found potential edge: Edge(549->703,w:6.0) between AGTCCACCAC...GCCAGCCCCG:W6(V549_D-1) and T:W-1(V703_D-1)
removing vertex T:W-1(V703_D-1) was concatenated into AGTCCACCAC...CCAGCCCCGT:W6(V549_D-1)
Want to move edge Edge(703->704,w:6.0)(T:W-1(V703_D-1)->G:W-1(V704_D-1)) to (AGTCCACCAC...CCAGCCCCGT:W6(V549_D-1)->G:W-1(V704_D-1)
	adding edge: AGTCCACCAC...CCAGCCCCGT:W6(V549_D-1) to G:W-1(V704_D-1)
removing edge Edge(703->704,w:6.0)(T:W-1(V703_D-1)->G:W-1(V704_D-1))
removing edge Edge(549->703,w:6.0)(AGTCCACCAC...CCAGCCCCGT:W6(V549_D-1)->T:W-1(V703_D-1))
Found potential edge: Edge(549->704,w:6.0) between AGTCCACCAC...CCAGCCCCGT:W6(V549_D-1) and G:W-1(V704_D-1)
removing vertex G:W-1(V704_D-1) was concatenated into AGTCCACCAC...CAGCCCCGTG:W6(V549_D-1)
Want to move edge Edge(704->705,w:6.0)(G:W-1(V704_D-1)->G:W-1(V705_D-1)) to (AGTCCACCAC...CAGCCCCGTG:W6(V549_D-1)->G:W-1(V705_D-1)
	adding edge: AGTCCACCAC...CAGCCCCGTG:W6(V549_D-1) to G:W-1(V705_D-1)
removing edge Edge(704->705,w:6.0)(G:W-1(V704_D-1)->G:W-1(V705_D-1))
removing edge Edge(549->704,w:6.0)(AGTCCACCAC...CAGCCCCGTG:W6(V549_D-1)->G:W-1(V704_D-1))
Found potential edge: Edge(549->705,w:6.0) between AGTCCACCAC...CAGCCCCGTG:W6(V549_D-1) and G:W-1(V705_D-1)
removing vertex G:W-1(V705_D-1) was concatenated into AGTCCACCAC...AGCCCCGTGG:W6(V549_D-1)
Want to move edge Edge(705->706,w:6.0)(G:W-1(V705_D-1)->A:W-1(V706_D-1)) to (AGTCCACCAC...AGCCCCGTGG:W6(V549_D-1)->A:W-1(V706_D-1)
	adding edge: AGTCCACCAC...AGCCCCGTGG:W6(V549_D-1) to A:W-1(V706_D-1)
removing edge Edge(705->706,w:6.0)(G:W-1(V705_D-1)->A:W-1(V706_D-1))
removing edge Edge(549->705,w:6.0)(AGTCCACCAC...AGCCCCGTGG:W6(V549_D-1)->G:W-1(V705_D-1))
Found potential edge: Edge(549->706,w:6.0) between AGTCCACCAC...AGCCCCGTGG:W6(V549_D-1) and A:W-1(V706_D-1)
removing vertex A:W-1(V706_D-1) was concatenated into AGTCCACCAC...GCCCCGTGGA:W6(V549_D-1)
Want to move edge Edge(706->707,w:6.0)(A:W-1(V706_D-1)->G:W-1(V707_D-1)) to (AGTCCACCAC...GCCCCGTGGA:W6(V549_D-1)->G:W-1(V707_D-1)
	adding edge: AGTCCACCAC...GCCCCGTGGA:W6(V549_D-1) to G:W-1(V707_D-1)
removing edge Edge(706->707,w:6.0)(A:W-1(V706_D-1)->G:W-1(V707_D-1))
removing edge Edge(549->706,w:6.0)(AGTCCACCAC...GCCCCGTGGA:W6(V549_D-1)->A:W-1(V706_D-1))
Found potential edge: Edge(549->707,w:6.0) between AGTCCACCAC...GCCCCGTGGA:W6(V549_D-1) and G:W-1(V707_D-1)
removing vertex G:W-1(V707_D-1) was concatenated into AGTCCACCAC...CCCCGTGGAG:W6(V549_D-1)
Want to move edge Edge(707->708,w:6.0)(G:W-1(V707_D-1)->G:W-1(V708_D-1)) to (AGTCCACCAC...CCCCGTGGAG:W6(V549_D-1)->G:W-1(V708_D-1)
	adding edge: AGTCCACCAC...CCCCGTGGAG:W6(V549_D-1) to G:W-1(V708_D-1)
removing edge Edge(707->708,w:6.0)(G:W-1(V707_D-1)->G:W-1(V708_D-1))
removing edge Edge(549->707,w:6.0)(AGTCCACCAC...CCCCGTGGAG:W6(V549_D-1)->G:W-1(V707_D-1))
Found potential edge: Edge(549->708,w:6.0) between AGTCCACCAC...CCCCGTGGAG:W6(V549_D-1) and G:W-1(V708_D-1)
removing vertex G:W-1(V708_D-1) was concatenated into AGTCCACCAC...CCCGTGGAGG:W6(V549_D-1)
Want to move edge Edge(708->709,w:6.0)(G:W-1(V708_D-1)->G:W-1(V709_D-1)) to (AGTCCACCAC...CCCGTGGAGG:W6(V549_D-1)->G:W-1(V709_D-1)
	adding edge: AGTCCACCAC...CCCGTGGAGG:W6(V549_D-1) to G:W-1(V709_D-1)
removing edge Edge(708->709,w:6.0)(G:W-1(V708_D-1)->G:W-1(V709_D-1))
removing edge Edge(549->708,w:6.0)(AGTCCACCAC...CCCGTGGAGG:W6(V549_D-1)->G:W-1(V708_D-1))
Found potential edge: Edge(549->709,w:6.0) between AGTCCACCAC...CCCGTGGAGG:W6(V549_D-1) and G:W-1(V709_D-1)
removing vertex G:W-1(V709_D-1) was concatenated into AGTCCACCAC...CCGTGGAGGG:W6(V549_D-1)
Want to move edge Edge(709->710,w:4.0)(G:W-1(V709_D-1)->A:W-1(V710_D-1)) to (AGTCCACCAC...CCGTGGAGGG:W6(V549_D-1)->A:W-1(V710_D-1)
	adding edge: AGTCCACCAC...CCGTGGAGGG:W6(V549_D-1) to A:W-1(V710_D-1)
removing edge Edge(709->710,w:4.0)(G:W-1(V709_D-1)->A:W-1(V710_D-1))
removing edge Edge(549->709,w:6.0)(AGTCCACCAC...CCGTGGAGGG:W6(V549_D-1)->G:W-1(V709_D-1))
Found potential edge: Edge(549->710,w:4.0) between AGTCCACCAC...CCGTGGAGGG:W6(V549_D-1) and A:W-1(V710_D-1)
removing vertex A:W-1(V710_D-1) was concatenated into AGTCCACCAC...CGTGGAGGGA:W6(V549_D-1)
Want to move edge Edge(710->711,w:4.0)(A:W-1(V710_D-1)->G:W-1(V711_D-1)) to (AGTCCACCAC...CGTGGAGGGA:W6(V549_D-1)->G:W-1(V711_D-1)
	adding edge: AGTCCACCAC...CGTGGAGGGA:W6(V549_D-1) to G:W-1(V711_D-1)
removing edge Edge(710->711,w:4.0)(A:W-1(V710_D-1)->G:W-1(V711_D-1))
removing edge Edge(549->710,w:4.0)(AGTCCACCAC...CGTGGAGGGA:W6(V549_D-1)->A:W-1(V710_D-1))
Found potential edge: Edge(549->711,w:4.0) between AGTCCACCAC...CGTGGAGGGA:W6(V549_D-1) and G:W-1(V711_D-1)
removing vertex G:W-1(V711_D-1) was concatenated into AGTCCACCAC...GTGGAGGGAG:W6(V549_D-1)
Want to move edge Edge(711->712,w:4.0)(G:W-1(V711_D-1)->C:W-1(V712_D-1)) to (AGTCCACCAC...GTGGAGGGAG:W6(V549_D-1)->C:W-1(V712_D-1)
	adding edge: AGTCCACCAC...GTGGAGGGAG:W6(V549_D-1) to C:W-1(V712_D-1)
removing edge Edge(711->712,w:4.0)(G:W-1(V711_D-1)->C:W-1(V712_D-1))
removing edge Edge(549->711,w:4.0)(AGTCCACCAC...GTGGAGGGAG:W6(V549_D-1)->G:W-1(V711_D-1))
Found potential edge: Edge(549->712,w:4.0) between AGTCCACCAC...GTGGAGGGAG:W6(V549_D-1) and C:W-1(V712_D-1)
removing vertex C:W-1(V712_D-1) was concatenated into AGTCCACCAC...TGGAGGGAGC:W6(V549_D-1)
Want to move edge Edge(712->713,w:4.0)(C:W-1(V712_D-1)->C:W-1(V713_D-1)) to (AGTCCACCAC...TGGAGGGAGC:W6(V549_D-1)->C:W-1(V713_D-1)
	adding edge: AGTCCACCAC...TGGAGGGAGC:W6(V549_D-1) to C:W-1(V713_D-1)
removing edge Edge(712->713,w:4.0)(C:W-1(V712_D-1)->C:W-1(V713_D-1))
removing edge Edge(549->712,w:4.0)(AGTCCACCAC...TGGAGGGAGC:W6(V549_D-1)->C:W-1(V712_D-1))
Found potential edge: Edge(549->713,w:4.0) between AGTCCACCAC...TGGAGGGAGC:W6(V549_D-1) and C:W-1(V713_D-1)
removing vertex C:W-1(V713_D-1) was concatenated into AGTCCACCAC...GGAGGGAGCC:W6(V549_D-1)
Want to move edge Edge(713->714,w:4.0)(C:W-1(V713_D-1)->A:W-1(V714_D-1)) to (AGTCCACCAC...GGAGGGAGCC:W6(V549_D-1)->A:W-1(V714_D-1)
	adding edge: AGTCCACCAC...GGAGGGAGCC:W6(V549_D-1) to A:W-1(V714_D-1)
removing edge Edge(713->714,w:4.0)(C:W-1(V713_D-1)->A:W-1(V714_D-1))
removing edge Edge(549->713,w:4.0)(AGTCCACCAC...GGAGGGAGCC:W6(V549_D-1)->C:W-1(V713_D-1))
Found potential edge: Edge(549->714,w:4.0) between AGTCCACCAC...GGAGGGAGCC:W6(V549_D-1) and A:W-1(V714_D-1)
removing vertex A:W-1(V714_D-1) was concatenated into AGTCCACCAC...GAGGGAGCCA:W6(V549_D-1)
Want to move edge Edge(714->715,w:4.0)(A:W-1(V714_D-1)->C:W-1(V715_D-1)) to (AGTCCACCAC...GAGGGAGCCA:W6(V549_D-1)->C:W-1(V715_D-1)
	adding edge: AGTCCACCAC...GAGGGAGCCA:W6(V549_D-1) to C:W-1(V715_D-1)
removing edge Edge(714->715,w:4.0)(A:W-1(V714_D-1)->C:W-1(V715_D-1))
removing edge Edge(549->714,w:4.0)(AGTCCACCAC...GAGGGAGCCA:W6(V549_D-1)->A:W-1(V714_D-1))
Found potential edge: Edge(549->715,w:4.0) between AGTCCACCAC...GAGGGAGCCA:W6(V549_D-1) and C:W-1(V715_D-1)
removing vertex C:W-1(V715_D-1) was concatenated into AGTCCACCAC...AGGGAGCCAC:W6(V549_D-1)
Want to move edge Edge(715->716,w:4.0)(C:W-1(V715_D-1)->C:W-1(V716_D-1)) to (AGTCCACCAC...AGGGAGCCAC:W6(V549_D-1)->C:W-1(V716_D-1)
	adding edge: AGTCCACCAC...AGGGAGCCAC:W6(V549_D-1) to C:W-1(V716_D-1)
removing edge Edge(715->716,w:4.0)(C:W-1(V715_D-1)->C:W-1(V716_D-1))
removing edge Edge(549->715,w:4.0)(AGTCCACCAC...AGGGAGCCAC:W6(V549_D-1)->C:W-1(V715_D-1))
Found potential edge: Edge(549->716,w:4.0) between AGTCCACCAC...AGGGAGCCAC:W6(V549_D-1) and C:W-1(V716_D-1)
removing vertex C:W-1(V716_D-1) was concatenated into AGTCCACCAC...GGGAGCCACC:W6(V549_D-1)
Want to move edge Edge(716->717,w:4.0)(C:W-1(V716_D-1)->A:W-1(V717_D-1)) to (AGTCCACCAC...GGGAGCCACC:W6(V549_D-1)->A:W-1(V717_D-1)
	adding edge: AGTCCACCAC...GGGAGCCACC:W6(V549_D-1) to A:W-1(V717_D-1)
removing edge Edge(716->717,w:4.0)(C:W-1(V716_D-1)->A:W-1(V717_D-1))
removing edge Edge(549->716,w:4.0)(AGTCCACCAC...GGGAGCCACC:W6(V549_D-1)->C:W-1(V716_D-1))
Found potential edge: Edge(717->718,w:6.0) between A:W-1(V717_D-1) and G:W-1(V718_D-1)
removing vertex G:W-1(V718_D-1) was concatenated into AG:W6(V717_D-1)
Want to move edge Edge(718->719,w:6.0)(G:W-1(V718_D-1)->C:W-1(V719_D-1)) to (AG:W6(V717_D-1)->C:W-1(V719_D-1)
	adding edge: AG:W6(V717_D-1) to C:W-1(V719_D-1)
removing edge Edge(718->719,w:6.0)(G:W-1(V718_D-1)->C:W-1(V719_D-1))
removing edge Edge(717->718,w:6.0)(AG:W6(V717_D-1)->G:W-1(V718_D-1))
Found potential edge: Edge(717->719,w:6.0) between AG:W6(V717_D-1) and C:W-1(V719_D-1)
removing vertex C:W-1(V719_D-1) was concatenated into AGC:W6(V717_D-1)
Want to move edge Edge(719->720,w:6.0)(C:W-1(V719_D-1)->C:W-1(V720_D-1)) to (AGC:W6(V717_D-1)->C:W-1(V720_D-1)
	adding edge: AGC:W6(V717_D-1) to C:W-1(V720_D-1)
removing edge Edge(719->720,w:6.0)(C:W-1(V719_D-1)->C:W-1(V720_D-1))
removing edge Edge(717->719,w:6.0)(AGC:W6(V717_D-1)->C:W-1(V719_D-1))
Found potential edge: Edge(717->720,w:6.0) between AGC:W6(V717_D-1) and C:W-1(V720_D-1)
removing vertex C:W-1(V720_D-1) was concatenated into AGCC:W6(V717_D-1)
Want to move edge Edge(720->721,w:6.0)(C:W-1(V720_D-1)->A:W-1(V721_D-1)) to (AGCC:W6(V717_D-1)->A:W-1(V721_D-1)
	adding edge: AGCC:W6(V717_D-1) to A:W-1(V721_D-1)
removing edge Edge(720->721,w:6.0)(C:W-1(V720_D-1)->A:W-1(V721_D-1))
removing edge Edge(717->720,w:6.0)(AGCC:W6(V717_D-1)->C:W-1(V720_D-1))
Found potential edge: Edge(717->721,w:6.0) between AGCC:W6(V717_D-1) and A:W-1(V721_D-1)
removing vertex A:W-1(V721_D-1) was concatenated into AGCCA:W6(V717_D-1)
Want to move edge Edge(721->722,w:6.0)(A:W-1(V721_D-1)->C:W-1(V722_D-1)) to (AGCCA:W6(V717_D-1)->C:W-1(V722_D-1)
	adding edge: AGCCA:W6(V717_D-1) to C:W-1(V722_D-1)
removing edge Edge(721->722,w:6.0)(A:W-1(V721_D-1)->C:W-1(V722_D-1))
removing edge Edge(717->721,w:6.0)(AGCCA:W6(V717_D-1)->A:W-1(V721_D-1))
Found potential edge: Edge(717->722,w:6.0) between AGCCA:W6(V717_D-1) and C:W-1(V722_D-1)
removing vertex C:W-1(V722_D-1) was concatenated into AGCCAC:W6(V717_D-1)
Want to move edge Edge(722->723,w:6.0)(C:W-1(V722_D-1)->A:W-1(V723_D-1)) to (AGCCAC:W6(V717_D-1)->A:W-1(V723_D-1)
	adding edge: AGCCAC:W6(V717_D-1) to A:W-1(V723_D-1)
removing edge Edge(722->723,w:6.0)(C:W-1(V722_D-1)->A:W-1(V723_D-1))
removing edge Edge(717->722,w:6.0)(AGCCAC:W6(V717_D-1)->C:W-1(V722_D-1))
Found potential edge: Edge(717->723,w:6.0) between AGCCAC:W6(V717_D-1) and A:W-1(V723_D-1)
removing vertex A:W-1(V723_D-1) was concatenated into AGCCACA:W6(V717_D-1)
Want to move edge Edge(723->724,w:6.0)(A:W-1(V723_D-1)->G:W-1(V724_D-1)) to (AGCCACA:W6(V717_D-1)->G:W-1(V724_D-1)
	adding edge: AGCCACA:W6(V717_D-1) to G:W-1(V724_D-1)
removing edge Edge(723->724,w:6.0)(A:W-1(V723_D-1)->G:W-1(V724_D-1))
removing edge Edge(717->723,w:6.0)(AGCCACA:W6(V717_D-1)->A:W-1(V723_D-1))
Found potential edge: Edge(717->724,w:6.0) between AGCCACA:W6(V717_D-1) and G:W-1(V724_D-1)
removing vertex G:W-1(V724_D-1) was concatenated into AGCCACAG:W6(V717_D-1)
Want to move edge Edge(724->725,w:6.0)(G:W-1(V724_D-1)->G:W-1(V725_D-1)) to (AGCCACAG:W6(V717_D-1)->G:W-1(V725_D-1)
	adding edge: AGCCACAG:W6(V717_D-1) to G:W-1(V725_D-1)
removing edge Edge(724->725,w:6.0)(G:W-1(V724_D-1)->G:W-1(V725_D-1))
removing edge Edge(717->724,w:6.0)(AGCCACAG:W6(V717_D-1)->G:W-1(V724_D-1))
Found potential edge: Edge(717->725,w:6.0) between AGCCACAG:W6(V717_D-1) and G:W-1(V725_D-1)
removing vertex G:W-1(V725_D-1) was concatenated into AGCCACAGG:W6(V717_D-1)
Want to move edge Edge(725->726,w:6.0)(G:W-1(V725_D-1)->T:W-1(V726_D-1)) to (AGCCACAGG:W6(V717_D-1)->T:W-1(V726_D-1)
	adding edge: AGCCACAGG:W6(V717_D-1) to T:W-1(V726_D-1)
removing edge Edge(725->726,w:6.0)(G:W-1(V725_D-1)->T:W-1(V726_D-1))
removing edge Edge(717->725,w:6.0)(AGCCACAGG:W6(V717_D-1)->G:W-1(V725_D-1))
Found potential edge: Edge(717->726,w:6.0) between AGCCACAGG:W6(V717_D-1) and T:W-1(V726_D-1)
removing vertex T:W-1(V726_D-1) was concatenated into AGCCACAGGT:W6(V717_D-1)
Want to move edge Edge(726->727,w:6.0)(T:W-1(V726_D-1)->A:W-1(V727_D-1)) to (AGCCACAGGT:W6(V717_D-1)->A:W-1(V727_D-1)
	adding edge: AGCCACAGGT:W6(V717_D-1) to A:W-1(V727_D-1)
removing edge Edge(726->727,w:6.0)(T:W-1(V726_D-1)->A:W-1(V727_D-1))
removing edge Edge(717->726,w:6.0)(AGCCACAGGT:W6(V717_D-1)->T:W-1(V726_D-1))
Found potential edge: Edge(717->727,w:6.0) between AGCCACAGGT:W6(V717_D-1) and A:W-1(V727_D-1)
removing vertex A:W-1(V727_D-1) was concatenated into AGCCACAGGTA:W6(V717_D-1)
Want to move edge Edge(727->728,w:6.0)(A:W-1(V727_D-1)->C:W-1(V728_D-1)) to (AGCCACAGGTA:W6(V717_D-1)->C:W-1(V728_D-1)
	adding edge: AGCCACAGGTA:W6(V717_D-1) to C:W-1(V728_D-1)
removing edge Edge(727->728,w:6.0)(A:W-1(V727_D-1)->C:W-1(V728_D-1))
removing edge Edge(717->727,w:6.0)(AGCCACAGGTA:W6(V717_D-1)->A:W-1(V727_D-1))
Found potential edge: Edge(717->728,w:6.0) between AGCCACAGGTA:W6(V717_D-1) and C:W-1(V728_D-1)
removing vertex C:W-1(V728_D-1) was concatenated into AGCCACAGGTAC:W6(V717_D-1)
Want to move edge Edge(728->729,w:6.0)(C:W-1(V728_D-1)->C:W-1(V729_D-1)) to (AGCCACAGGTAC:W6(V717_D-1)->C:W-1(V729_D-1)
	adding edge: AGCCACAGGTAC:W6(V717_D-1) to C:W-1(V729_D-1)
removing edge Edge(728->729,w:6.0)(C:W-1(V728_D-1)->C:W-1(V729_D-1))
removing edge Edge(717->728,w:6.0)(AGCCACAGGTAC:W6(V717_D-1)->C:W-1(V728_D-1))
Found potential edge: Edge(717->729,w:6.0) between AGCCACAGGTAC:W6(V717_D-1) and C:W-1(V729_D-1)
removing vertex C:W-1(V729_D-1) was concatenated into AGCCACAGGTACC:W6(V717_D-1)
Want to move edge Edge(729->730,w:6.0)(C:W-1(V729_D-1)->T:W-1(V730_D-1)) to (AGCCACAGGTACC:W6(V717_D-1)->T:W-1(V730_D-1)
	adding edge: AGCCACAGGTACC:W6(V717_D-1) to T:W-1(V730_D-1)
removing edge Edge(729->730,w:6.0)(C:W-1(V729_D-1)->T:W-1(V730_D-1))
removing edge Edge(717->729,w:6.0)(AGCCACAGGTACC:W6(V717_D-1)->C:W-1(V729_D-1))
Found potential edge: Edge(717->730,w:6.0) between AGCCACAGGTACC:W6(V717_D-1) and T:W-1(V730_D-1)
removing vertex T:W-1(V730_D-1) was concatenated into AGCCACAGGTACCT:W6(V717_D-1)
Want to move edge Edge(730->731,w:6.0)(T:W-1(V730_D-1)->G:W-1(V731_D-1)) to (AGCCACAGGTACCT:W6(V717_D-1)->G:W-1(V731_D-1)
	adding edge: AGCCACAGGTACCT:W6(V717_D-1) to G:W-1(V731_D-1)
removing edge Edge(730->731,w:6.0)(T:W-1(V730_D-1)->G:W-1(V731_D-1))
removing edge Edge(717->730,w:6.0)(AGCCACAGGTACCT:W6(V717_D-1)->T:W-1(V730_D-1))
Found potential edge: Edge(717->731,w:6.0) between AGCCACAGGTACCT:W6(V717_D-1) and G:W-1(V731_D-1)
removing vertex G:W-1(V731_D-1) was concatenated into AGCCACAGGTACCTG:W6(V717_D-1)
Want to move edge Edge(731->732,w:6.0)(G:W-1(V731_D-1)->A:W-1(V732_D-1)) to (AGCCACAGGTACCTG:W6(V717_D-1)->A:W-1(V732_D-1)
	adding edge: AGCCACAGGTACCTG:W6(V717_D-1) to A:W-1(V732_D-1)
removing edge Edge(731->732,w:6.0)(G:W-1(V731_D-1)->A:W-1(V732_D-1))
removing edge Edge(717->731,w:6.0)(AGCCACAGGTACCTG:W6(V717_D-1)->G:W-1(V731_D-1))
Found potential edge: Edge(717->732,w:6.0) between AGCCACAGGTACCTG:W6(V717_D-1) and A:W-1(V732_D-1)
removing vertex A:W-1(V732_D-1) was concatenated into AGCCACAGGTACCTGA:W6(V717_D-1)
Want to move edge Edge(732->733,w:6.0)(A:W-1(V732_D-1)->T:W-1(V733_D-1)) to (AGCCACAGGTACCTGA:W6(V717_D-1)->T:W-1(V733_D-1)
	adding edge: AGCCACAGGTACCTGA:W6(V717_D-1) to T:W-1(V733_D-1)
removing edge Edge(732->733,w:6.0)(A:W-1(V732_D-1)->T:W-1(V733_D-1))
removing edge Edge(717->732,w:6.0)(AGCCACAGGTACCTGA:W6(V717_D-1)->A:W-1(V732_D-1))
Found potential edge: Edge(717->733,w:6.0) between AGCCACAGGTACCTGA:W6(V717_D-1) and T:W-1(V733_D-1)
removing vertex T:W-1(V733_D-1) was concatenated into AGCCACAGGTACCTGAT:W6(V717_D-1)
Want to move edge Edge(733->734,w:6.0)(T:W-1(V733_D-1)->G:W-1(V734_D-1)) to (AGCCACAGGTACCTGAT:W6(V717_D-1)->G:W-1(V734_D-1)
	adding edge: AGCCACAGGTACCTGAT:W6(V717_D-1) to G:W-1(V734_D-1)
removing edge Edge(733->734,w:6.0)(T:W-1(V733_D-1)->G:W-1(V734_D-1))
removing edge Edge(717->733,w:6.0)(AGCCACAGGTACCTGAT:W6(V717_D-1)->T:W-1(V733_D-1))
Found potential edge: Edge(717->734,w:6.0) between AGCCACAGGTACCTGAT:W6(V717_D-1) and G:W-1(V734_D-1)
removing vertex G:W-1(V734_D-1) was concatenated into AGCCACAGGTACCTGATG:W6(V717_D-1)
Want to move edge Edge(734->735,w:6.0)(G:W-1(V734_D-1)->G:W-1(V735_D-1)) to (AGCCACAGGTACCTGATG:W6(V717_D-1)->G:W-1(V735_D-1)
	adding edge: AGCCACAGGTACCTGATG:W6(V717_D-1) to G:W-1(V735_D-1)
removing edge Edge(734->735,w:6.0)(G:W-1(V734_D-1)->G:W-1(V735_D-1))
removing edge Edge(717->734,w:6.0)(AGCCACAGGTACCTGATG:W6(V717_D-1)->G:W-1(V734_D-1))
Found potential edge: Edge(717->735,w:6.0) between AGCCACAGGTACCTGATG:W6(V717_D-1) and G:W-1(V735_D-1)
removing vertex G:W-1(V735_D-1) was concatenated into AGCCACAGGTACCTGATGG:W6(V717_D-1)
Want to move edge Edge(735->736,w:6.0)(G:W-1(V735_D-1)->A:W-1(V736_D-1)) to (AGCCACAGGTACCTGATGG:W6(V717_D-1)->A:W-1(V736_D-1)
	adding edge: AGCCACAGGTACCTGATGG:W6(V717_D-1) to A:W-1(V736_D-1)
removing edge Edge(735->736,w:6.0)(G:W-1(V735_D-1)->A:W-1(V736_D-1))
removing edge Edge(717->735,w:6.0)(AGCCACAGGTACCTGATGG:W6(V717_D-1)->G:W-1(V735_D-1))
Found potential edge: Edge(717->736,w:6.0) between AGCCACAGGTACCTGATGG:W6(V717_D-1) and A:W-1(V736_D-1)
removing vertex A:W-1(V736_D-1) was concatenated into AGCCACAGGTACCTGATGGA:W6(V717_D-1)
Want to move edge Edge(736->737,w:6.0)(A:W-1(V736_D-1)->A:W-1(V737_D-1)) to (AGCCACAGGTACCTGATGGA:W6(V717_D-1)->A:W-1(V737_D-1)
	adding edge: AGCCACAGGTACCTGATGGA:W6(V717_D-1) to A:W-1(V737_D-1)
removing edge Edge(736->737,w:6.0)(A:W-1(V736_D-1)->A:W-1(V737_D-1))
removing edge Edge(717->736,w:6.0)(AGCCACAGGTACCTGATGGA:W6(V717_D-1)->A:W-1(V736_D-1))
Found potential edge: Edge(717->737,w:6.0) between AGCCACAGGTACCTGATGGA:W6(V717_D-1) and A:W-1(V737_D-1)
removing vertex A:W-1(V737_D-1) was concatenated into AGCCACAGGTACCTGATGGAA:W6(V717_D-1)
Want to move edge Edge(737->738,w:6.0)(A:W-1(V737_D-1)->A:W-1(V738_D-1)) to (AGCCACAGGTACCTGATGGAA:W6(V717_D-1)->A:W-1(V738_D-1)
	adding edge: AGCCACAGGTACCTGATGGAA:W6(V717_D-1) to A:W-1(V738_D-1)
removing edge Edge(737->738,w:6.0)(A:W-1(V737_D-1)->A:W-1(V738_D-1))
removing edge Edge(717->737,w:6.0)(AGCCACAGGTACCTGATGGAA:W6(V717_D-1)->A:W-1(V737_D-1))
Found potential edge: Edge(717->738,w:6.0) between AGCCACAGGTACCTGATGGAA:W6(V717_D-1) and A:W-1(V738_D-1)
removing vertex A:W-1(V738_D-1) was concatenated into AGCCACAGGTACCTGATGGAAA:W6(V717_D-1)
Want to move edge Edge(738->739,w:6.0)(A:W-1(V738_D-1)->T:W-1(V739_D-1)) to (AGCCACAGGTACCTGATGGAAA:W6(V717_D-1)->T:W-1(V739_D-1)
	adding edge: AGCCACAGGTACCTGATGGAAA:W6(V717_D-1) to T:W-1(V739_D-1)
removing edge Edge(738->739,w:6.0)(A:W-1(V738_D-1)->T:W-1(V739_D-1))
removing edge Edge(717->738,w:6.0)(AGCCACAGGTACCTGATGGAAA:W6(V717_D-1)->A:W-1(V738_D-1))
Found potential edge: Edge(717->739,w:6.0) between AGCCACAGGTACCTGATGGAAA:W6(V717_D-1) and T:W-1(V739_D-1)
removing vertex T:W-1(V739_D-1) was concatenated into AGCCACAGGTACCTGATGGAAAT:W6(V717_D-1)
Want to move edge Edge(739->740,w:6.0)(T:W-1(V739_D-1)->G:W-1(V740_D-1)) to (AGCCACAGGTACCTGATGGAAAT:W6(V717_D-1)->G:W-1(V740_D-1)
	adding edge: AGCCACAGGTACCTGATGGAAAT:W6(V717_D-1) to G:W-1(V740_D-1)
removing edge Edge(739->740,w:6.0)(T:W-1(V739_D-1)->G:W-1(V740_D-1))
removing edge Edge(717->739,w:6.0)(AGCCACAGGTACCTGATGGAAAT:W6(V717_D-1)->T:W-1(V739_D-1))
Found potential edge: Edge(717->740,w:6.0) between AGCCACAGGTACCTGATGGAAAT:W6(V717_D-1) and G:W-1(V740_D-1)
removing vertex G:W-1(V740_D-1) was concatenated into AGCCACAGGTACCTGATGGAAATG:W6(V717_D-1)
Want to move edge Edge(740->741,w:6.0)(G:W-1(V740_D-1)->C:W-1(V741_D-1)) to (AGCCACAGGTACCTGATGGAAATG:W6(V717_D-1)->C:W-1(V741_D-1)
	adding edge: AGCCACAGGTACCTGATGGAAATG:W6(V717_D-1) to C:W-1(V741_D-1)
removing edge Edge(740->741,w:6.0)(G:W-1(V740_D-1)->C:W-1(V741_D-1))
removing edge Edge(717->740,w:6.0)(AGCCACAGGTACCTGATGGAAATG:W6(V717_D-1)->G:W-1(V740_D-1))
Found potential edge: Edge(717->741,w:6.0) between AGCCACAGGTACCTGATGGAAATG:W6(V717_D-1) and C:W-1(V741_D-1)
removing vertex C:W-1(V741_D-1) was concatenated into AGCCACAGGTACCTGATGGAAATGC:W6(V717_D-1)
Want to move edge Edge(741->742,w:6.0)(C:W-1(V741_D-1)->C:W-1(V742_D-1)) to (AGCCACAGGTACCTGATGGAAATGC:W6(V717_D-1)->C:W-1(V742_D-1)
	adding edge: AGCCACAGGTACCTGATGGAAATGC:W6(V717_D-1) to C:W-1(V742_D-1)
removing edge Edge(741->742,w:6.0)(C:W-1(V741_D-1)->C:W-1(V742_D-1))
removing edge Edge(717->741,w:6.0)(AGCCACAGGTACCTGATGGAAATGC:W6(V717_D-1)->C:W-1(V741_D-1))
Found potential edge: Edge(717->742,w:6.0) between AGCCACAGGTACCTGATGGAAATGC:W6(V717_D-1) and C:W-1(V742_D-1)
removing vertex C:W-1(V742_D-1) was concatenated into AGCCACAGGTACCTGATGGAAATGCC:W6(V717_D-1)
Want to move edge Edge(742->743,w:4.0)(C:W-1(V742_D-1)->G:W-1(V743_D-1)) to (AGCCACAGGTACCTGATGGAAATGCC:W6(V717_D-1)->G:W-1(V743_D-1)
	adding edge: AGCCACAGGTACCTGATGGAAATGCC:W6(V717_D-1) to G:W-1(V743_D-1)
removing edge Edge(742->743,w:4.0)(C:W-1(V742_D-1)->G:W-1(V743_D-1))
removing edge Edge(717->742,w:6.0)(AGCCACAGGTACCTGATGGAAATGCC:W6(V717_D-1)->C:W-1(V742_D-1))
Found potential edge: Edge(717->743,w:4.0) between AGCCACAGGTACCTGATGGAAATGCC:W6(V717_D-1) and G:W-1(V743_D-1)
removing vertex G:W-1(V743_D-1) was concatenated into AGCCACAGGTACCTGATGGAAATGCCG:W6(V717_D-1)
Want to move edge Edge(743->744,w:4.0)(G:W-1(V743_D-1)->G:W-1(V744_D-1)) to (AGCCACAGGTACCTGATGGAAATGCCG:W6(V717_D-1)->G:W-1(V744_D-1)
	adding edge: AGCCACAGGTACCTGATGGAAATGCCG:W6(V717_D-1) to G:W-1(V744_D-1)
removing edge Edge(743->744,w:4.0)(G:W-1(V743_D-1)->G:W-1(V744_D-1))
removing edge Edge(717->743,w:4.0)(AGCCACAGGTACCTGATGGAAATGCCG:W6(V717_D-1)->G:W-1(V743_D-1))
Found potential edge: Edge(717->744,w:4.0) between AGCCACAGGTACCTGATGGAAATGCCG:W6(V717_D-1) and G:W-1(V744_D-1)
removing vertex G:W-1(V744_D-1) was concatenated into AGCCACAGGTACCTGATGGAAATGCCGG:W6(V717_D-1)
Want to move edge Edge(744->745,w:4.0)(G:W-1(V744_D-1)->C:W-1(V745_D-1)) to (AGCCACAGGTACCTGATGGAAATGCCGG:W6(V717_D-1)->C:W-1(V745_D-1)
	adding edge: AGCCACAGGTACCTGATGGAAATGCCGG:W6(V717_D-1) to C:W-1(V745_D-1)
removing edge Edge(744->745,w:4.0)(G:W-1(V744_D-1)->C:W-1(V745_D-1))
removing edge Edge(717->744,w:4.0)(AGCCACAGGTACCTGATGGAAATGCCGG:W6(V717_D-1)->G:W-1(V744_D-1))
Found potential edge: Edge(717->745,w:4.0) between AGCCACAGGTACCTGATGGAAATGCCGG:W6(V717_D-1) and C:W-1(V745_D-1)
removing vertex C:W-1(V745_D-1) was concatenated into AGCCACAGGTACCTGATGGAAATGCCGGC:W6(V717_D-1)
Want to move edge Edge(745->746,w:4.0)(C:W-1(V745_D-1)->T:W-1(V746_D-1)) to (AGCCACAGGTACCTGATGGAAATGCCGGC:W6(V717_D-1)->T:W-1(V746_D-1)
	adding edge: AGCCACAGGTACCTGATGGAAATGCCGGC:W6(V717_D-1) to T:W-1(V746_D-1)
removing edge Edge(745->746,w:4.0)(C:W-1(V745_D-1)->T:W-1(V746_D-1))
removing edge Edge(717->745,w:4.0)(AGCCACAGGTACCTGATGGAAATGCCGGC:W6(V717_D-1)->C:W-1(V745_D-1))
Found potential edge: Edge(717->746,w:4.0) between AGCCACAGGTACCTGATGGAAATGCCGGC:W6(V717_D-1) and T:W-1(V746_D-1)
removing vertex T:W-1(V746_D-1) was concatenated into AGCCACAGGTACCTGATGGAAATGCCGGCT:W6(V717_D-1)
Want to move edge Edge(746->747,w:4.0)(T:W-1(V746_D-1)->C:W-1(V747_D-1)) to (AGCCACAGGTACCTGATGGAAATGCCGGCT:W6(V717_D-1)->C:W-1(V747_D-1)
	adding edge: AGCCACAGGTACCTGATGGAAATGCCGGCT:W6(V717_D-1) to C:W-1(V747_D-1)
removing edge Edge(746->747,w:4.0)(T:W-1(V746_D-1)->C:W-1(V747_D-1))
removing edge Edge(717->746,w:4.0)(AGCCACAGGTACCTGATGGAAATGCCGGCT:W6(V717_D-1)->T:W-1(V746_D-1))
Found potential edge: Edge(717->747,w:4.0) between AGCCACAGGTACCTGATGGAAATGCCGGCT:W6(V717_D-1) and C:W-1(V747_D-1)
removing vertex C:W-1(V747_D-1) was concatenated into AGCCACAGGT...ATGCCGGCTC:W6(V717_D-1)
Want to move edge Edge(747->748,w:4.0)(C:W-1(V747_D-1)->A:W-1(V748_D-1)) to (AGCCACAGGT...ATGCCGGCTC:W6(V717_D-1)->A:W-1(V748_D-1)
	adding edge: AGCCACAGGT...ATGCCGGCTC:W6(V717_D-1) to A:W-1(V748_D-1)
removing edge Edge(747->748,w:4.0)(C:W-1(V747_D-1)->A:W-1(V748_D-1))
removing edge Edge(717->747,w:4.0)(AGCCACAGGT...ATGCCGGCTC:W6(V717_D-1)->C:W-1(V747_D-1))
Found potential edge: Edge(717->748,w:4.0) between AGCCACAGGT...ATGCCGGCTC:W6(V717_D-1) and A:W-1(V748_D-1)
removing vertex A:W-1(V748_D-1) was concatenated into AGCCACAGGT...TGCCGGCTCA:W6(V717_D-1)
Want to move edge Edge(748->749,w:2.0)(A:W-1(V748_D-1)->C:W-1(V749_D-1)) to (AGCCACAGGT...TGCCGGCTCA:W6(V717_D-1)->C:W-1(V749_D-1)
	adding edge: AGCCACAGGT...TGCCGGCTCA:W6(V717_D-1) to C:W-1(V749_D-1)
removing edge Edge(748->749,w:2.0)(A:W-1(V748_D-1)->C:W-1(V749_D-1))
removing edge Edge(717->748,w:4.0)(AGCCACAGGT...TGCCGGCTCA:W6(V717_D-1)->A:W-1(V748_D-1))
Found potential edge: Edge(717->749,w:2.0) between AGCCACAGGT...TGCCGGCTCA:W6(V717_D-1) and C:W-1(V749_D-1)
removing vertex C:W-1(V749_D-1) was concatenated into AGCCACAGGT...GCCGGCTCAC:W6(V717_D-1)
Want to move edge Edge(749->750,w:2.0)(C:W-1(V749_D-1)->T:W-1(V750_D-1)) to (AGCCACAGGT...GCCGGCTCAC:W6(V717_D-1)->T:W-1(V750_D-1)
	adding edge: AGCCACAGGT...GCCGGCTCAC:W6(V717_D-1) to T:W-1(V750_D-1)
removing edge Edge(749->750,w:2.0)(C:W-1(V749_D-1)->T:W-1(V750_D-1))
removing edge Edge(717->749,w:2.0)(AGCCACAGGT...GCCGGCTCAC:W6(V717_D-1)->C:W-1(V749_D-1))
Found potential edge: Edge(717->750,w:2.0) between AGCCACAGGT...GCCGGCTCAC:W6(V717_D-1) and T:W-1(V750_D-1)
removing vertex T:W-1(V750_D-1) was concatenated into AGCCACAGGT...CCGGCTCACT:W5(V717_D-1)
Want to move edge Edge(750->751,w:2.0)(T:W-1(V750_D-1)->T:W-1(V751_D-1)) to (AGCCACAGGT...CCGGCTCACT:W5(V717_D-1)->T:W-1(V751_D-1)
	adding edge: AGCCACAGGT...CCGGCTCACT:W5(V717_D-1) to T:W-1(V751_D-1)
removing edge Edge(750->751,w:2.0)(T:W-1(V750_D-1)->T:W-1(V751_D-1))
removing edge Edge(717->750,w:2.0)(AGCCACAGGT...CCGGCTCACT:W5(V717_D-1)->T:W-1(V750_D-1))
Found potential edge: Edge(717->751,w:2.0) between AGCCACAGGT...CCGGCTCACT:W5(V717_D-1) and T:W-1(V751_D-1)
removing vertex T:W-1(V751_D-1) was concatenated into AGCCACAGGT...CGGCTCACTT:W5(V717_D-1)
Want to move edge Edge(751->752,w:2.0)(T:W-1(V751_D-1)->C:W-1(V752_D-1)) to (AGCCACAGGT...CGGCTCACTT:W5(V717_D-1)->C:W-1(V752_D-1)
	adding edge: AGCCACAGGT...CGGCTCACTT:W5(V717_D-1) to C:W-1(V752_D-1)
removing edge Edge(751->752,w:2.0)(T:W-1(V751_D-1)->C:W-1(V752_D-1))
removing edge Edge(717->751,w:2.0)(AGCCACAGGT...CGGCTCACTT:W5(V717_D-1)->T:W-1(V751_D-1))
Found potential edge: Edge(717->752,w:2.0) between AGCCACAGGT...CGGCTCACTT:W5(V717_D-1) and C:W-1(V752_D-1)
removing vertex C:W-1(V752_D-1) was concatenated into AGCCACAGGT...GGCTCACTTC:W5(V717_D-1)
Want to move edge Edge(752->753,w:2.0)(C:W-1(V752_D-1)->C:W-1(V753_D-1)) to (AGCCACAGGT...GGCTCACTTC:W5(V717_D-1)->C:W-1(V753_D-1)
	adding edge: AGCCACAGGT...GGCTCACTTC:W5(V717_D-1) to C:W-1(V753_D-1)
removing edge Edge(752->753,w:2.0)(C:W-1(V752_D-1)->C:W-1(V753_D-1))
removing edge Edge(717->752,w:2.0)(AGCCACAGGT...GGCTCACTTC:W5(V717_D-1)->C:W-1(V752_D-1))
Found potential edge: Edge(717->753,w:2.0) between AGCCACAGGT...GGCTCACTTC:W5(V717_D-1) and C:W-1(V753_D-1)
removing vertex C:W-1(V753_D-1) was concatenated into AGCCACAGGT...GCTCACTTCC:W5(V717_D-1)
Want to move edge Edge(753->754,w:2.0)(C:W-1(V753_D-1)->T:W-1(V754_D-1)) to (AGCCACAGGT...GCTCACTTCC:W5(V717_D-1)->T:W-1(V754_D-1)
	adding edge: AGCCACAGGT...GCTCACTTCC:W5(V717_D-1) to T:W-1(V754_D-1)
removing edge Edge(753->754,w:2.0)(C:W-1(V753_D-1)->T:W-1(V754_D-1))
removing edge Edge(717->753,w:2.0)(AGCCACAGGT...GCTCACTTCC:W5(V717_D-1)->C:W-1(V753_D-1))
Found potential edge: Edge(717->754,w:2.0) between AGCCACAGGT...GCTCACTTCC:W5(V717_D-1) and T:W-1(V754_D-1)
removing vertex T:W-1(V754_D-1) was concatenated into AGCCACAGGT...CTCACTTCCT:W5(V717_D-1)
Want to move edge Edge(754->755,w:2.0)(T:W-1(V754_D-1)->G:W-1(V755_D-1)) to (AGCCACAGGT...CTCACTTCCT:W5(V717_D-1)->G:W-1(V755_D-1)
	adding edge: AGCCACAGGT...CTCACTTCCT:W5(V717_D-1) to G:W-1(V755_D-1)
removing edge Edge(754->755,w:2.0)(T:W-1(V754_D-1)->G:W-1(V755_D-1))
removing edge Edge(717->754,w:2.0)(AGCCACAGGT...CTCACTTCCT:W5(V717_D-1)->T:W-1(V754_D-1))
Found potential edge: Edge(717->755,w:2.0) between AGCCACAGGT...CTCACTTCCT:W5(V717_D-1) and G:W-1(V755_D-1)
removing vertex G:W-1(V755_D-1) was concatenated into AGCCACAGGT...TCACTTCCTG:W5(V717_D-1)
Want to move edge Edge(755->756,w:2.0)(G:W-1(V755_D-1)->T:W-1(V756_D-1)) to (AGCCACAGGT...TCACTTCCTG:W5(V717_D-1)->T:W-1(V756_D-1)
	adding edge: AGCCACAGGT...TCACTTCCTG:W5(V717_D-1) to T:W-1(V756_D-1)
removing edge Edge(755->756,w:2.0)(G:W-1(V755_D-1)->T:W-1(V756_D-1))
removing edge Edge(717->755,w:2.0)(AGCCACAGGT...TCACTTCCTG:W5(V717_D-1)->G:W-1(V755_D-1))
Found potential edge: Edge(717->756,w:2.0) between AGCCACAGGT...TCACTTCCTG:W5(V717_D-1) and T:W-1(V756_D-1)
removing vertex T:W-1(V756_D-1) was concatenated into AGCCACAGGT...CACTTCCTGT:W5(V717_D-1)
Want to move edge Edge(756->757,w:2.0)(T:W-1(V756_D-1)->G:W-1(V757_D-1)) to (AGCCACAGGT...CACTTCCTGT:W5(V717_D-1)->G:W-1(V757_D-1)
	adding edge: AGCCACAGGT...CACTTCCTGT:W5(V717_D-1) to G:W-1(V757_D-1)
removing edge Edge(756->757,w:2.0)(T:W-1(V756_D-1)->G:W-1(V757_D-1))
removing edge Edge(717->756,w:2.0)(AGCCACAGGT...CACTTCCTGT:W5(V717_D-1)->T:W-1(V756_D-1))
Found potential edge: Edge(717->757,w:2.0) between AGCCACAGGT...CACTTCCTGT:W5(V717_D-1) and G:W-1(V757_D-1)
removing vertex G:W-1(V757_D-1) was concatenated into AGCCACAGGT...ACTTCCTGTG:W5(V717_D-1)
Want to move edge Edge(757->758,w:2.0)(G:W-1(V757_D-1)->A:W-1(V758_D-1)) to (AGCCACAGGT...ACTTCCTGTG:W5(V717_D-1)->A:W-1(V758_D-1)
	adding edge: AGCCACAGGT...ACTTCCTGTG:W5(V717_D-1) to A:W-1(V758_D-1)
removing edge Edge(757->758,w:2.0)(G:W-1(V757_D-1)->A:W-1(V758_D-1))
removing edge Edge(717->757,w:2.0)(AGCCACAGGT...ACTTCCTGTG:W5(V717_D-1)->G:W-1(V757_D-1))
Found potential edge: Edge(717->758,w:2.0) between AGCCACAGGT...ACTTCCTGTG:W5(V717_D-1) and A:W-1(V758_D-1)
removing vertex A:W-1(V758_D-1) was concatenated into AGCCACAGGT...CTTCCTGTGA:W5(V717_D-1)
removing edge Edge(717->758,w:2.0)(AGCCACAGGT...CTTCCTGTGA:W5(V717_D-1)->A:W-1(V758_D-1))
Found potential edge: Edge(786->787,w:2.0) between GCTAGGGGAAATAGGGGAGCTCCA:W0(V786_D-1) and A:W-1(V787_D-1)
removing vertex A:W-1(V787_D-1) was concatenated into GCTAGGGGAAATAGGGGAGCTCCAA:W0(V786_D-1)
Want to move edge Edge(787->788,w:2.0)(A:W-1(V787_D-1)->A:W-1(V788_D-1)) to (GCTAGGGGAAATAGGGGAGCTCCAA:W0(V786_D-1)->A:W-1(V788_D-1)
	adding edge: GCTAGGGGAAATAGGGGAGCTCCAA:W0(V786_D-1) to A:W-1(V788_D-1)
removing edge Edge(787->788,w:2.0)(A:W-1(V787_D-1)->A:W-1(V788_D-1))
removing edge Edge(786->787,w:2.0)(GCTAGGGGAAATAGGGGAGCTCCAA:W0(V786_D-1)->A:W-1(V787_D-1))
Found potential edge: Edge(786->788,w:2.0) between GCTAGGGGAAATAGGGGAGCTCCAA:W0(V786_D-1) and A:W-1(V788_D-1)
removing vertex A:W-1(V788_D-1) was concatenated into GCTAGGGGAAATAGGGGAGCTCCAAA:W0(V786_D-1)
Want to move edge Edge(788->789,w:2.0)(A:W-1(V788_D-1)->C:W-1(V789_D-1)) to (GCTAGGGGAAATAGGGGAGCTCCAAA:W0(V786_D-1)->C:W-1(V789_D-1)
	adding edge: GCTAGGGGAAATAGGGGAGCTCCAAA:W0(V786_D-1) to C:W-1(V789_D-1)
removing edge Edge(788->789,w:2.0)(A:W-1(V788_D-1)->C:W-1(V789_D-1))
removing edge Edge(786->788,w:2.0)(GCTAGGGGAAATAGGGGAGCTCCAAA:W0(V786_D-1)->A:W-1(V788_D-1))
Found potential edge: Edge(786->789,w:2.0) between GCTAGGGGAAATAGGGGAGCTCCAAA:W0(V786_D-1) and C:W-1(V789_D-1)
removing vertex C:W-1(V789_D-1) was concatenated into GCTAGGGGAAATAGGGGAGCTCCAAAC:W0(V786_D-1)
Want to move edge Edge(789->790,w:2.0)(C:W-1(V789_D-1)->C:W-1(V790_D-1)) to (GCTAGGGGAAATAGGGGAGCTCCAAAC:W0(V786_D-1)->C:W-1(V790_D-1)
	adding edge: GCTAGGGGAAATAGGGGAGCTCCAAAC:W0(V786_D-1) to C:W-1(V790_D-1)
removing edge Edge(789->790,w:2.0)(C:W-1(V789_D-1)->C:W-1(V790_D-1))
removing edge Edge(786->789,w:2.0)(GCTAGGGGAAATAGGGGAGCTCCAAAC:W0(V786_D-1)->C:W-1(V789_D-1))
Found potential edge: Edge(786->790,w:2.0) between GCTAGGGGAAATAGGGGAGCTCCAAAC:W0(V786_D-1) and C:W-1(V790_D-1)
removing vertex C:W-1(V790_D-1) was concatenated into GCTAGGGGAAATAGGGGAGCTCCAAACC:W0(V786_D-1)
Want to move edge Edge(790->791,w:2.0)(C:W-1(V790_D-1)->C:W-1(V791_D-1)) to (GCTAGGGGAAATAGGGGAGCTCCAAACC:W0(V786_D-1)->C:W-1(V791_D-1)
	adding edge: GCTAGGGGAAATAGGGGAGCTCCAAACC:W0(V786_D-1) to C:W-1(V791_D-1)
removing edge Edge(790->791,w:2.0)(C:W-1(V790_D-1)->C:W-1(V791_D-1))
removing edge Edge(786->790,w:2.0)(GCTAGGGGAAATAGGGGAGCTCCAAACC:W0(V786_D-1)->C:W-1(V790_D-1))
Found potential edge: Edge(786->791,w:2.0) between GCTAGGGGAAATAGGGGAGCTCCAAACC:W0(V786_D-1) and C:W-1(V791_D-1)
removing vertex C:W-1(V791_D-1) was concatenated into GCTAGGGGAAATAGGGGAGCTCCAAACCC:W0(V786_D-1)
Want to move edge Edge(791->792,w:2.0)(C:W-1(V791_D-1)->A:W-1(V792_D-1)) to (GCTAGGGGAAATAGGGGAGCTCCAAACCC:W0(V786_D-1)->A:W-1(V792_D-1)
	adding edge: GCTAGGGGAAATAGGGGAGCTCCAAACCC:W0(V786_D-1) to A:W-1(V792_D-1)
removing edge Edge(791->792,w:2.0)(C:W-1(V791_D-1)->A:W-1(V792_D-1))
removing edge Edge(786->791,w:2.0)(GCTAGGGGAAATAGGGGAGCTCCAAACCC:W0(V786_D-1)->C:W-1(V791_D-1))
Found potential edge: Edge(786->792,w:2.0) between GCTAGGGGAAATAGGGGAGCTCCAAACCC:W0(V786_D-1) and A:W-1(V792_D-1)
removing vertex A:W-1(V792_D-1) was concatenated into GCTAGGGGAAATAGGGGAGCTCCAAACCCA:W0(V786_D-1)
Want to move edge Edge(792->793,w:2.0)(A:W-1(V792_D-1)->G:W-1(V793_D-1)) to (GCTAGGGGAAATAGGGGAGCTCCAAACCCA:W0(V786_D-1)->G:W-1(V793_D-1)
	adding edge: GCTAGGGGAAATAGGGGAGCTCCAAACCCA:W0(V786_D-1) to G:W-1(V793_D-1)
removing edge Edge(792->793,w:2.0)(A:W-1(V792_D-1)->G:W-1(V793_D-1))
removing edge Edge(786->792,w:2.0)(GCTAGGGGAAATAGGGGAGCTCCAAACCCA:W0(V786_D-1)->A:W-1(V792_D-1))
Found potential edge: Edge(786->793,w:2.0) between GCTAGGGGAAATAGGGGAGCTCCAAACCCA:W0(V786_D-1) and G:W-1(V793_D-1)
removing vertex G:W-1(V793_D-1) was concatenated into GCTAGGGGAA...CCAAACCCAG:W0(V786_D-1)
Want to move edge Edge(793->794,w:2.0)(G:W-1(V793_D-1)->C:W-1(V794_D-1)) to (GCTAGGGGAA...CCAAACCCAG:W0(V786_D-1)->C:W-1(V794_D-1)
	adding edge: GCTAGGGGAA...CCAAACCCAG:W0(V786_D-1) to C:W-1(V794_D-1)
removing edge Edge(793->794,w:2.0)(G:W-1(V793_D-1)->C:W-1(V794_D-1))
removing edge Edge(786->793,w:2.0)(GCTAGGGGAA...CCAAACCCAG:W0(V786_D-1)->G:W-1(V793_D-1))
Found potential edge: Edge(786->794,w:2.0) between GCTAGGGGAA...CCAAACCCAG:W0(V786_D-1) and C:W-1(V794_D-1)
removing vertex C:W-1(V794_D-1) was concatenated into GCTAGGGGAA...CAAACCCAGC:W1(V786_D-1)
Want to move edge Edge(794->795,w:2.0)(C:W-1(V794_D-1)->C:W-1(V795_D-1)) to (GCTAGGGGAA...CAAACCCAGC:W1(V786_D-1)->C:W-1(V795_D-1)
	adding edge: GCTAGGGGAA...CAAACCCAGC:W1(V786_D-1) to C:W-1(V795_D-1)
removing edge Edge(794->795,w:2.0)(C:W-1(V794_D-1)->C:W-1(V795_D-1))
removing edge Edge(786->794,w:2.0)(GCTAGGGGAA...CAAACCCAGC:W1(V786_D-1)->C:W-1(V794_D-1))
Found potential edge: Edge(786->795,w:2.0) between GCTAGGGGAA...CAAACCCAGC:W1(V786_D-1) and C:W-1(V795_D-1)
removing vertex C:W-1(V795_D-1) was concatenated into GCTAGGGGAA...AAACCCAGCC:W1(V786_D-1)
Want to move edge Edge(795->796,w:2.0)(C:W-1(V795_D-1)->C:W-1(V796_D-1)) to (GCTAGGGGAA...AAACCCAGCC:W1(V786_D-1)->C:W-1(V796_D-1)
	adding edge: GCTAGGGGAA...AAACCCAGCC:W1(V786_D-1) to C:W-1(V796_D-1)
removing edge Edge(795->796,w:2.0)(C:W-1(V795_D-1)->C:W-1(V796_D-1))
removing edge Edge(786->795,w:2.0)(GCTAGGGGAA...AAACCCAGCC:W1(V786_D-1)->C:W-1(V795_D-1))
Found potential edge: Edge(786->796,w:2.0) between GCTAGGGGAA...AAACCCAGCC:W1(V786_D-1) and C:W-1(V796_D-1)
removing vertex C:W-1(V796_D-1) was concatenated into GCTAGGGGAA...AACCCAGCCC:W1(V786_D-1)
Want to move edge Edge(796->797,w:2.0)(C:W-1(V796_D-1)->C:W-1(V797_D-1)) to (GCTAGGGGAA...AACCCAGCCC:W1(V786_D-1)->C:W-1(V797_D-1)
	adding edge: GCTAGGGGAA...AACCCAGCCC:W1(V786_D-1) to C:W-1(V797_D-1)
removing edge Edge(796->797,w:2.0)(C:W-1(V796_D-1)->C:W-1(V797_D-1))
removing edge Edge(786->796,w:2.0)(GCTAGGGGAA...AACCCAGCCC:W1(V786_D-1)->C:W-1(V796_D-1))
Found potential edge: Edge(786->797,w:2.0) between GCTAGGGGAA...AACCCAGCCC:W1(V786_D-1) and C:W-1(V797_D-1)
removing vertex C:W-1(V797_D-1) was concatenated into GCTAGGGGAA...ACCCAGCCCC:W1(V786_D-1)
Want to move edge Edge(797->798,w:2.0)(C:W-1(V797_D-1)->G:W-1(V798_D-1)) to (GCTAGGGGAA...ACCCAGCCCC:W1(V786_D-1)->G:W-1(V798_D-1)
	adding edge: GCTAGGGGAA...ACCCAGCCCC:W1(V786_D-1) to G:W-1(V798_D-1)
removing edge Edge(797->798,w:2.0)(C:W-1(V797_D-1)->G:W-1(V798_D-1))
removing edge Edge(786->797,w:2.0)(GCTAGGGGAA...ACCCAGCCCC:W1(V786_D-1)->C:W-1(V797_D-1))
Found potential edge: Edge(786->798,w:2.0) between GCTAGGGGAA...ACCCAGCCCC:W1(V786_D-1) and G:W-1(V798_D-1)
removing vertex G:W-1(V798_D-1) was concatenated into GCTAGGGGAA...CCCAGCCCCG:W1(V786_D-1)
Want to move edge Edge(798->799,w:2.0)(G:W-1(V798_D-1)->T:W-1(V799_D-1)) to (GCTAGGGGAA...CCCAGCCCCG:W1(V786_D-1)->T:W-1(V799_D-1)
	adding edge: GCTAGGGGAA...CCCAGCCCCG:W1(V786_D-1) to T:W-1(V799_D-1)
removing edge Edge(798->799,w:2.0)(G:W-1(V798_D-1)->T:W-1(V799_D-1))
removing edge Edge(786->798,w:2.0)(GCTAGGGGAA...CCCAGCCCCG:W1(V786_D-1)->G:W-1(V798_D-1))
Found potential edge: Edge(786->799,w:2.0) between GCTAGGGGAA...CCCAGCCCCG:W1(V786_D-1) and T:W-1(V799_D-1)
removing vertex T:W-1(V799_D-1) was concatenated into GCTAGGGGAA...CCAGCCCCGT:W1(V786_D-1)
Want to move edge Edge(799->800,w:2.0)(T:W-1(V799_D-1)->G:W-1(V800_D-1)) to (GCTAGGGGAA...CCAGCCCCGT:W1(V786_D-1)->G:W-1(V800_D-1)
	adding edge: GCTAGGGGAA...CCAGCCCCGT:W1(V786_D-1) to G:W-1(V800_D-1)
removing edge Edge(799->800,w:2.0)(T:W-1(V799_D-1)->G:W-1(V800_D-1))
removing edge Edge(786->799,w:2.0)(GCTAGGGGAA...CCAGCCCCGT:W1(V786_D-1)->T:W-1(V799_D-1))
Found potential edge: Edge(786->800,w:2.0) between GCTAGGGGAA...CCAGCCCCGT:W1(V786_D-1) and G:W-1(V800_D-1)
removing vertex G:W-1(V800_D-1) was concatenated into GCTAGGGGAA...CAGCCCCGTG:W1(V786_D-1)
Want to move edge Edge(800->801,w:2.0)(G:W-1(V800_D-1)->G:W-1(V801_D-1)) to (GCTAGGGGAA...CAGCCCCGTG:W1(V786_D-1)->G:W-1(V801_D-1)
	adding edge: GCTAGGGGAA...CAGCCCCGTG:W1(V786_D-1) to G:W-1(V801_D-1)
removing edge Edge(800->801,w:2.0)(G:W-1(V800_D-1)->G:W-1(V801_D-1))
removing edge Edge(786->800,w:2.0)(GCTAGGGGAA...CAGCCCCGTG:W1(V786_D-1)->G:W-1(V800_D-1))
Found potential edge: Edge(786->801,w:2.0) between GCTAGGGGAA...CAGCCCCGTG:W1(V786_D-1) and G:W-1(V801_D-1)
removing vertex G:W-1(V801_D-1) was concatenated into GCTAGGGGAA...AGCCCCGTGG:W1(V786_D-1)
Want to move edge Edge(801->802,w:2.0)(G:W-1(V801_D-1)->A:W-1(V802_D-1)) to (GCTAGGGGAA...AGCCCCGTGG:W1(V786_D-1)->A:W-1(V802_D-1)
	adding edge: GCTAGGGGAA...AGCCCCGTGG:W1(V786_D-1) to A:W-1(V802_D-1)
removing edge Edge(801->802,w:2.0)(G:W-1(V801_D-1)->A:W-1(V802_D-1))
removing edge Edge(786->801,w:2.0)(GCTAGGGGAA...AGCCCCGTGG:W1(V786_D-1)->G:W-1(V801_D-1))
Found potential edge: Edge(786->802,w:2.0) between GCTAGGGGAA...AGCCCCGTGG:W1(V786_D-1) and A:W-1(V802_D-1)
removing vertex A:W-1(V802_D-1) was concatenated into GCTAGGGGAA...GCCCCGTGGA:W1(V786_D-1)
Want to move edge Edge(802->803,w:2.0)(A:W-1(V802_D-1)->G:W-1(V803_D-1)) to (GCTAGGGGAA...GCCCCGTGGA:W1(V786_D-1)->G:W-1(V803_D-1)
	adding edge: GCTAGGGGAA...GCCCCGTGGA:W1(V786_D-1) to G:W-1(V803_D-1)
removing edge Edge(802->803,w:2.0)(A:W-1(V802_D-1)->G:W-1(V803_D-1))
removing edge Edge(786->802,w:2.0)(GCTAGGGGAA...GCCCCGTGGA:W1(V786_D-1)->A:W-1(V802_D-1))
Found potential edge: Edge(786->803,w:2.0) between GCTAGGGGAA...GCCCCGTGGA:W1(V786_D-1) and G:W-1(V803_D-1)
removing vertex G:W-1(V803_D-1) was concatenated into GCTAGGGGAA...CCCCGTGGAG:W1(V786_D-1)
Want to move edge Edge(803->804,w:2.0)(G:W-1(V803_D-1)->G:W-1(V804_D-1)) to (GCTAGGGGAA...CCCCGTGGAG:W1(V786_D-1)->G:W-1(V804_D-1)
	adding edge: GCTAGGGGAA...CCCCGTGGAG:W1(V786_D-1) to G:W-1(V804_D-1)
removing edge Edge(803->804,w:2.0)(G:W-1(V803_D-1)->G:W-1(V804_D-1))
removing edge Edge(786->803,w:2.0)(GCTAGGGGAA...CCCCGTGGAG:W1(V786_D-1)->G:W-1(V803_D-1))
Found potential edge: Edge(786->804,w:2.0) between GCTAGGGGAA...CCCCGTGGAG:W1(V786_D-1) and G:W-1(V804_D-1)
removing vertex G:W-1(V804_D-1) was concatenated into GCTAGGGGAA...CCCGTGGAGG:W1(V786_D-1)
Want to move edge Edge(804->805,w:2.0)(G:W-1(V804_D-1)->G:W-1(V805_D-1)) to (GCTAGGGGAA...CCCGTGGAGG:W1(V786_D-1)->G:W-1(V805_D-1)
	adding edge: GCTAGGGGAA...CCCGTGGAGG:W1(V786_D-1) to G:W-1(V805_D-1)
removing edge Edge(804->805,w:2.0)(G:W-1(V804_D-1)->G:W-1(V805_D-1))
removing edge Edge(786->804,w:2.0)(GCTAGGGGAA...CCCGTGGAGG:W1(V786_D-1)->G:W-1(V804_D-1))
Found potential edge: Edge(786->805,w:2.0) between GCTAGGGGAA...CCCGTGGAGG:W1(V786_D-1) and G:W-1(V805_D-1)
removing vertex G:W-1(V805_D-1) was concatenated into GCTAGGGGAA...CCGTGGAGGG:W1(V786_D-1)
Want to move edge Edge(805->806,w:2.0)(G:W-1(V805_D-1)->A:W-1(V806_D-1)) to (GCTAGGGGAA...CCGTGGAGGG:W1(V786_D-1)->A:W-1(V806_D-1)
	adding edge: GCTAGGGGAA...CCGTGGAGGG:W1(V786_D-1) to A:W-1(V806_D-1)
removing edge Edge(805->806,w:2.0)(G:W-1(V805_D-1)->A:W-1(V806_D-1))
removing edge Edge(786->805,w:2.0)(GCTAGGGGAA...CCGTGGAGGG:W1(V786_D-1)->G:W-1(V805_D-1))
Found potential edge: Edge(786->806,w:2.0) between GCTAGGGGAA...CCGTGGAGGG:W1(V786_D-1) and A:W-1(V806_D-1)
removing vertex A:W-1(V806_D-1) was concatenated into GCTAGGGGAA...CGTGGAGGGA:W1(V786_D-1)
Want to move edge Edge(806->807,w:2.0)(A:W-1(V806_D-1)->G:W-1(V807_D-1)) to (GCTAGGGGAA...CGTGGAGGGA:W1(V786_D-1)->G:W-1(V807_D-1)
	adding edge: GCTAGGGGAA...CGTGGAGGGA:W1(V786_D-1) to G:W-1(V807_D-1)
removing edge Edge(806->807,w:2.0)(A:W-1(V806_D-1)->G:W-1(V807_D-1))
removing edge Edge(786->806,w:2.0)(GCTAGGGGAA...CGTGGAGGGA:W1(V786_D-1)->A:W-1(V806_D-1))
Found potential edge: Edge(786->807,w:2.0) between GCTAGGGGAA...CGTGGAGGGA:W1(V786_D-1) and G:W-1(V807_D-1)
removing vertex G:W-1(V807_D-1) was concatenated into GCTAGGGGAA...GTGGAGGGAG:W1(V786_D-1)
Want to move edge Edge(807->808,w:2.0)(G:W-1(V807_D-1)->C:W-1(V808_D-1)) to (GCTAGGGGAA...GTGGAGGGAG:W1(V786_D-1)->C:W-1(V808_D-1)
	adding edge: GCTAGGGGAA...GTGGAGGGAG:W1(V786_D-1) to C:W-1(V808_D-1)
removing edge Edge(807->808,w:2.0)(G:W-1(V807_D-1)->C:W-1(V808_D-1))
removing edge Edge(786->807,w:2.0)(GCTAGGGGAA...GTGGAGGGAG:W1(V786_D-1)->G:W-1(V807_D-1))
Found potential edge: Edge(786->808,w:2.0) between GCTAGGGGAA...GTGGAGGGAG:W1(V786_D-1) and C:W-1(V808_D-1)
removing vertex C:W-1(V808_D-1) was concatenated into GCTAGGGGAA...TGGAGGGAGC:W1(V786_D-1)
Want to move edge Edge(808->809,w:2.0)(C:W-1(V808_D-1)->C:W-1(V809_D-1)) to (GCTAGGGGAA...TGGAGGGAGC:W1(V786_D-1)->C:W-1(V809_D-1)
	adding edge: GCTAGGGGAA...TGGAGGGAGC:W1(V786_D-1) to C:W-1(V809_D-1)
removing edge Edge(808->809,w:2.0)(C:W-1(V808_D-1)->C:W-1(V809_D-1))
removing edge Edge(786->808,w:2.0)(GCTAGGGGAA...TGGAGGGAGC:W1(V786_D-1)->C:W-1(V808_D-1))
Found potential edge: Edge(786->809,w:2.0) between GCTAGGGGAA...TGGAGGGAGC:W1(V786_D-1) and C:W-1(V809_D-1)
removing vertex C:W-1(V809_D-1) was concatenated into GCTAGGGGAA...GGAGGGAGCC:W1(V786_D-1)
Want to move edge Edge(809->810,w:2.0)(C:W-1(V809_D-1)->A:W-1(V810_D-1)) to (GCTAGGGGAA...GGAGGGAGCC:W1(V786_D-1)->A:W-1(V810_D-1)
	adding edge: GCTAGGGGAA...GGAGGGAGCC:W1(V786_D-1) to A:W-1(V810_D-1)
removing edge Edge(809->810,w:2.0)(C:W-1(V809_D-1)->A:W-1(V810_D-1))
removing edge Edge(786->809,w:2.0)(GCTAGGGGAA...GGAGGGAGCC:W1(V786_D-1)->C:W-1(V809_D-1))
Found potential edge: Edge(786->810,w:2.0) between GCTAGGGGAA...GGAGGGAGCC:W1(V786_D-1) and A:W-1(V810_D-1)
removing vertex A:W-1(V810_D-1) was concatenated into GCTAGGGGAA...GAGGGAGCCA:W1(V786_D-1)
Want to move edge Edge(810->811,w:2.0)(A:W-1(V810_D-1)->C:W-1(V811_D-1)) to (GCTAGGGGAA...GAGGGAGCCA:W1(V786_D-1)->C:W-1(V811_D-1)
	adding edge: GCTAGGGGAA...GAGGGAGCCA:W1(V786_D-1) to C:W-1(V811_D-1)
removing edge Edge(810->811,w:2.0)(A:W-1(V810_D-1)->C:W-1(V811_D-1))
removing edge Edge(786->810,w:2.0)(GCTAGGGGAA...GAGGGAGCCA:W1(V786_D-1)->A:W-1(V810_D-1))
Found potential edge: Edge(786->811,w:2.0) between GCTAGGGGAA...GAGGGAGCCA:W1(V786_D-1) and C:W-1(V811_D-1)
removing vertex C:W-1(V811_D-1) was concatenated into GCTAGGGGAA...AGGGAGCCAC:W1(V786_D-1)
Want to move edge Edge(811->812,w:2.0)(C:W-1(V811_D-1)->C:W-1(V812_D-1)) to (GCTAGGGGAA...AGGGAGCCAC:W1(V786_D-1)->C:W-1(V812_D-1)
	adding edge: GCTAGGGGAA...AGGGAGCCAC:W1(V786_D-1) to C:W-1(V812_D-1)
removing edge Edge(811->812,w:2.0)(C:W-1(V811_D-1)->C:W-1(V812_D-1))
removing edge Edge(786->811,w:2.0)(GCTAGGGGAA...AGGGAGCCAC:W1(V786_D-1)->C:W-1(V811_D-1))
Found potential edge: Edge(786->812,w:2.0) between GCTAGGGGAA...AGGGAGCCAC:W1(V786_D-1) and C:W-1(V812_D-1)
removing vertex C:W-1(V812_D-1) was concatenated into GCTAGGGGAA...GGGAGCCACC:W1(V786_D-1)
Want to move edge Edge(812->717,w:2.0)(C:W-1(V812_D-1)->AGCCACAGGT...CTTCCTGTGA:W5(V717_D-1)) to (GCTAGGGGAA...GGGAGCCACC:W1(V786_D-1)->AGCCACAGGT...CTTCCTGTGA:W5(V717_D-1)
	adding edge: GCTAGGGGAA...GGGAGCCACC:W1(V786_D-1) to AGCCACAGGT...CTTCCTGTGA:W5(V717_D-1)
removing edge Edge(812->717,w:2.0)(C:W-1(V812_D-1)->AGCCACAGGT...CTTCCTGTGA:W5(V717_D-1))
removing edge Edge(786->812,w:2.0)(GCTAGGGGAA...GGGAGCCACC:W1(V786_D-1)->C:W-1(V812_D-1))
Found potential edge: Edge(813->814,w:2.0) between C:W-1(V813_D-1) and A:W-1(V814_D-1)
removing vertex A:W-1(V814_D-1) was concatenated into CA:W2(V813_D-1)
Want to move edge Edge(814->815,w:2.0)(A:W-1(V814_D-1)->G:W-1(V815_D-1)) to (CA:W2(V813_D-1)->G:W-1(V815_D-1)
	adding edge: CA:W2(V813_D-1) to G:W-1(V815_D-1)
removing edge Edge(814->815,w:2.0)(A:W-1(V814_D-1)->G:W-1(V815_D-1))
removing edge Edge(813->814,w:2.0)(CA:W2(V813_D-1)->A:W-1(V814_D-1))
Found potential edge: Edge(813->815,w:2.0) between CA:W2(V813_D-1) and G:W-1(V815_D-1)
removing vertex G:W-1(V815_D-1) was concatenated into CAG:W2(V813_D-1)
Want to move edge Edge(815->816,w:2.0)(G:W-1(V815_D-1)->C:W-1(V816_D-1)) to (CAG:W2(V813_D-1)->C:W-1(V816_D-1)
	adding edge: CAG:W2(V813_D-1) to C:W-1(V816_D-1)
removing edge Edge(815->816,w:2.0)(G:W-1(V815_D-1)->C:W-1(V816_D-1))
removing edge Edge(813->815,w:2.0)(CAG:W2(V813_D-1)->G:W-1(V815_D-1))
Found potential edge: Edge(813->816,w:2.0) between CAG:W2(V813_D-1) and C:W-1(V816_D-1)
removing vertex C:W-1(V816_D-1) was concatenated into CAGC:W2(V813_D-1)
Want to move edge Edge(816->817,w:2.0)(C:W-1(V816_D-1)->A:W-1(V817_D-1)) to (CAGC:W2(V813_D-1)->A:W-1(V817_D-1)
	adding edge: CAGC:W2(V813_D-1) to A:W-1(V817_D-1)
removing edge Edge(816->817,w:2.0)(C:W-1(V816_D-1)->A:W-1(V817_D-1))
removing edge Edge(813->816,w:2.0)(CAGC:W2(V813_D-1)->C:W-1(V816_D-1))
Found potential edge: Edge(813->817,w:2.0) between CAGC:W2(V813_D-1) and A:W-1(V817_D-1)
removing vertex A:W-1(V817_D-1) was concatenated into CAGCA:W2(V813_D-1)
Want to move edge Edge(817->818,w:2.0)(A:W-1(V817_D-1)->C:W-1(V818_D-1)) to (CAGCA:W2(V813_D-1)->C:W-1(V818_D-1)
	adding edge: CAGCA:W2(V813_D-1) to C:W-1(V818_D-1)
removing edge Edge(817->818,w:2.0)(A:W-1(V817_D-1)->C:W-1(V818_D-1))
removing edge Edge(813->817,w:2.0)(CAGCA:W2(V813_D-1)->A:W-1(V817_D-1))
Found potential edge: Edge(813->818,w:2.0) between CAGCA:W2(V813_D-1) and C:W-1(V818_D-1)
removing vertex C:W-1(V818_D-1) was concatenated into CAGCAC:W2(V813_D-1)
Want to move edge Edge(818->819,w:2.0)(C:W-1(V818_D-1)->T:W-1(V819_D-1)) to (CAGCAC:W2(V813_D-1)->T:W-1(V819_D-1)
	adding edge: CAGCAC:W2(V813_D-1) to T:W-1(V819_D-1)
removing edge Edge(818->819,w:2.0)(C:W-1(V818_D-1)->T:W-1(V819_D-1))
removing edge Edge(813->818,w:2.0)(CAGCAC:W2(V813_D-1)->C:W-1(V818_D-1))
Found potential edge: Edge(813->819,w:2.0) between CAGCAC:W2(V813_D-1) and T:W-1(V819_D-1)
removing vertex T:W-1(V819_D-1) was concatenated into CAGCACT:W2(V813_D-1)
Want to move edge Edge(819->820,w:2.0)(T:W-1(V819_D-1)->C:W-1(V820_D-1)) to (CAGCACT:W2(V813_D-1)->C:W-1(V820_D-1)
	adding edge: CAGCACT:W2(V813_D-1) to C:W-1(V820_D-1)
removing edge Edge(819->820,w:2.0)(T:W-1(V819_D-1)->C:W-1(V820_D-1))
removing edge Edge(813->819,w:2.0)(CAGCACT:W2(V813_D-1)->T:W-1(V819_D-1))
Found potential edge: Edge(813->820,w:2.0) between CAGCACT:W2(V813_D-1) and C:W-1(V820_D-1)
removing vertex C:W-1(V820_D-1) was concatenated into CAGCACTC:W2(V813_D-1)
Want to move edge Edge(820->821,w:2.0)(C:W-1(V820_D-1)->T:W-1(V821_D-1)) to (CAGCACTC:W2(V813_D-1)->T:W-1(V821_D-1)
	adding edge: CAGCACTC:W2(V813_D-1) to T:W-1(V821_D-1)
removing edge Edge(820->821,w:2.0)(C:W-1(V820_D-1)->T:W-1(V821_D-1))
removing edge Edge(813->820,w:2.0)(CAGCACTC:W2(V813_D-1)->C:W-1(V820_D-1))
Found potential edge: Edge(813->821,w:2.0) between CAGCACTC:W2(V813_D-1) and T:W-1(V821_D-1)
removing vertex T:W-1(V821_D-1) was concatenated into CAGCACTCT:W2(V813_D-1)
Want to move edge Edge(821->822,w:2.0)(T:W-1(V821_D-1)->G:W-1(V822_D-1)) to (CAGCACTCT:W2(V813_D-1)->G:W-1(V822_D-1)
	adding edge: CAGCACTCT:W2(V813_D-1) to G:W-1(V822_D-1)
removing edge Edge(821->822,w:2.0)(T:W-1(V821_D-1)->G:W-1(V822_D-1))
removing edge Edge(813->821,w:2.0)(CAGCACTCT:W2(V813_D-1)->T:W-1(V821_D-1))
Found potential edge: Edge(813->822,w:2.0) between CAGCACTCT:W2(V813_D-1) and G:W-1(V822_D-1)
removing vertex G:W-1(V822_D-1) was concatenated into CAGCACTCTG:W2(V813_D-1)
Want to move edge Edge(822->823,w:2.0)(G:W-1(V822_D-1)->A:W-1(V823_D-1)) to (CAGCACTCTG:W2(V813_D-1)->A:W-1(V823_D-1)
	adding edge: CAGCACTCTG:W2(V813_D-1) to A:W-1(V823_D-1)
removing edge Edge(822->823,w:2.0)(G:W-1(V822_D-1)->A:W-1(V823_D-1))
removing edge Edge(813->822,w:2.0)(CAGCACTCTG:W2(V813_D-1)->G:W-1(V822_D-1))
Found potential edge: Edge(813->823,w:2.0) between CAGCACTCTG:W2(V813_D-1) and A:W-1(V823_D-1)
removing vertex A:W-1(V823_D-1) was concatenated into CAGCACTCTGA:W2(V813_D-1)
Want to move edge Edge(823->824,w:2.0)(A:W-1(V823_D-1)->A:W-1(V824_D-1)) to (CAGCACTCTGA:W2(V813_D-1)->A:W-1(V824_D-1)
	adding edge: CAGCACTCTGA:W2(V813_D-1) to A:W-1(V824_D-1)
removing edge Edge(823->824,w:2.0)(A:W-1(V823_D-1)->A:W-1(V824_D-1))
removing edge Edge(813->823,w:2.0)(CAGCACTCTGA:W2(V813_D-1)->A:W-1(V823_D-1))
Found potential edge: Edge(813->824,w:2.0) between CAGCACTCTGA:W2(V813_D-1) and A:W-1(V824_D-1)
removing vertex A:W-1(V824_D-1) was concatenated into CAGCACTCTGAA:W2(V813_D-1)
Want to move edge Edge(824->825,w:2.0)(A:W-1(V824_D-1)->C:W-1(V825_D-1)) to (CAGCACTCTGAA:W2(V813_D-1)->C:W-1(V825_D-1)
	adding edge: CAGCACTCTGAA:W2(V813_D-1) to C:W-1(V825_D-1)
removing edge Edge(824->825,w:2.0)(A:W-1(V824_D-1)->C:W-1(V825_D-1))
removing edge Edge(813->824,w:2.0)(CAGCACTCTGAA:W2(V813_D-1)->A:W-1(V824_D-1))
Found potential edge: Edge(813->825,w:2.0) between CAGCACTCTGAA:W2(V813_D-1) and C:W-1(V825_D-1)
removing vertex C:W-1(V825_D-1) was concatenated into CAGCACTCTGAAC:W2(V813_D-1)
Want to move edge Edge(825->826,w:2.0)(C:W-1(V825_D-1)->C:W-1(V826_D-1)) to (CAGCACTCTGAAC:W2(V813_D-1)->C:W-1(V826_D-1)
	adding edge: CAGCACTCTGAAC:W2(V813_D-1) to C:W-1(V826_D-1)
removing edge Edge(825->826,w:2.0)(C:W-1(V825_D-1)->C:W-1(V826_D-1))
removing edge Edge(813->825,w:2.0)(CAGCACTCTGAAC:W2(V813_D-1)->C:W-1(V825_D-1))
Found potential edge: Edge(813->826,w:2.0) between CAGCACTCTGAAC:W2(V813_D-1) and C:W-1(V826_D-1)
removing vertex C:W-1(V826_D-1) was concatenated into CAGCACTCTGAACC:W2(V813_D-1)
Want to move edge Edge(826->827,w:2.0)(C:W-1(V826_D-1)->C:W-1(V827_D-1)) to (CAGCACTCTGAACC:W2(V813_D-1)->C:W-1(V827_D-1)
	adding edge: CAGCACTCTGAACC:W2(V813_D-1) to C:W-1(V827_D-1)
removing edge Edge(826->827,w:2.0)(C:W-1(V826_D-1)->C:W-1(V827_D-1))
removing edge Edge(813->826,w:2.0)(CAGCACTCTGAACC:W2(V813_D-1)->C:W-1(V826_D-1))
Found potential edge: Edge(813->827,w:2.0) between CAGCACTCTGAACC:W2(V813_D-1) and C:W-1(V827_D-1)
removing vertex C:W-1(V827_D-1) was concatenated into CAGCACTCTGAACCC:W2(V813_D-1)
Want to move edge Edge(827->828,w:2.0)(C:W-1(V827_D-1)->T:W-1(V828_D-1)) to (CAGCACTCTGAACCC:W2(V813_D-1)->T:W-1(V828_D-1)
	adding edge: CAGCACTCTGAACCC:W2(V813_D-1) to T:W-1(V828_D-1)
removing edge Edge(827->828,w:2.0)(C:W-1(V827_D-1)->T:W-1(V828_D-1))
removing edge Edge(813->827,w:2.0)(CAGCACTCTGAACCC:W2(V813_D-1)->C:W-1(V827_D-1))
Found potential edge: Edge(813->828,w:2.0) between CAGCACTCTGAACCC:W2(V813_D-1) and T:W-1(V828_D-1)
removing vertex T:W-1(V828_D-1) was concatenated into CAGCACTCTGAACCCT:W2(V813_D-1)
Want to move edge Edge(828->829,w:2.0)(T:W-1(V828_D-1)->G:W-1(V829_D-1)) to (CAGCACTCTGAACCCT:W2(V813_D-1)->G:W-1(V829_D-1)
	adding edge: CAGCACTCTGAACCCT:W2(V813_D-1) to G:W-1(V829_D-1)
removing edge Edge(828->829,w:2.0)(T:W-1(V828_D-1)->G:W-1(V829_D-1))
removing edge Edge(813->828,w:2.0)(CAGCACTCTGAACCCT:W2(V813_D-1)->T:W-1(V828_D-1))
Found potential edge: Edge(813->829,w:2.0) between CAGCACTCTGAACCCT:W2(V813_D-1) and G:W-1(V829_D-1)
removing vertex G:W-1(V829_D-1) was concatenated into CAGCACTCTGAACCCTG:W2(V813_D-1)
Want to move edge Edge(829->830,w:2.0)(G:W-1(V829_D-1)->T:W-1(V830_D-1)) to (CAGCACTCTGAACCCTG:W2(V813_D-1)->T:W-1(V830_D-1)
	adding edge: CAGCACTCTGAACCCTG:W2(V813_D-1) to T:W-1(V830_D-1)
removing edge Edge(829->830,w:2.0)(G:W-1(V829_D-1)->T:W-1(V830_D-1))
removing edge Edge(813->829,w:2.0)(CAGCACTCTGAACCCTG:W2(V813_D-1)->G:W-1(V829_D-1))
Found potential edge: Edge(813->830,w:2.0) between CAGCACTCTGAACCCTG:W2(V813_D-1) and T:W-1(V830_D-1)
removing vertex T:W-1(V830_D-1) was concatenated into CAGCACTCTGAACCCTGT:W2(V813_D-1)
Want to move edge Edge(830->831,w:2.0)(T:W-1(V830_D-1)->G:W-1(V831_D-1)) to (CAGCACTCTGAACCCTGT:W2(V813_D-1)->G:W-1(V831_D-1)
	adding edge: CAGCACTCTGAACCCTGT:W2(V813_D-1) to G:W-1(V831_D-1)
removing edge Edge(830->831,w:2.0)(T:W-1(V830_D-1)->G:W-1(V831_D-1))
removing edge Edge(813->830,w:2.0)(CAGCACTCTGAACCCTGT:W2(V813_D-1)->T:W-1(V830_D-1))
Found potential edge: Edge(813->831,w:2.0) between CAGCACTCTGAACCCTGT:W2(V813_D-1) and G:W-1(V831_D-1)
removing vertex G:W-1(V831_D-1) was concatenated into CAGCACTCTGAACCCTGTG:W2(V813_D-1)
Want to move edge Edge(831->832,w:2.0)(G:W-1(V831_D-1)->A:W-1(V832_D-1)) to (CAGCACTCTGAACCCTGTG:W2(V813_D-1)->A:W-1(V832_D-1)
	adding edge: CAGCACTCTGAACCCTGTG:W2(V813_D-1) to A:W-1(V832_D-1)
removing edge Edge(831->832,w:2.0)(G:W-1(V831_D-1)->A:W-1(V832_D-1))
removing edge Edge(813->831,w:2.0)(CAGCACTCTGAACCCTGTG:W2(V813_D-1)->G:W-1(V831_D-1))
Found potential edge: Edge(813->832,w:2.0) between CAGCACTCTGAACCCTGTG:W2(V813_D-1) and A:W-1(V832_D-1)
removing vertex A:W-1(V832_D-1) was concatenated into CAGCACTCTGAACCCTGTGA:W2(V813_D-1)
Want to move edge Edge(832->833,w:2.0)(A:W-1(V832_D-1)->G:W-1(V833_D-1)) to (CAGCACTCTGAACCCTGTGA:W2(V813_D-1)->G:W-1(V833_D-1)
	adding edge: CAGCACTCTGAACCCTGTGA:W2(V813_D-1) to G:W-1(V833_D-1)
removing edge Edge(832->833,w:2.0)(A:W-1(V832_D-1)->G:W-1(V833_D-1))
removing edge Edge(813->832,w:2.0)(CAGCACTCTGAACCCTGTGA:W2(V813_D-1)->A:W-1(V832_D-1))
Found potential edge: Edge(813->833,w:2.0) between CAGCACTCTGAACCCTGTGA:W2(V813_D-1) and G:W-1(V833_D-1)
removing vertex G:W-1(V833_D-1) was concatenated into CAGCACTCTGAACCCTGTGAG:W2(V813_D-1)
Want to move edge Edge(833->834,w:2.0)(G:W-1(V833_D-1)->G:W-1(V834_D-1)) to (CAGCACTCTGAACCCTGTGAG:W2(V813_D-1)->G:W-1(V834_D-1)
	adding edge: CAGCACTCTGAACCCTGTGAG:W2(V813_D-1) to G:W-1(V834_D-1)
removing edge Edge(833->834,w:2.0)(G:W-1(V833_D-1)->G:W-1(V834_D-1))
removing edge Edge(813->833,w:2.0)(CAGCACTCTGAACCCTGTGAG:W2(V813_D-1)->G:W-1(V833_D-1))
Found potential edge: Edge(813->834,w:2.0) between CAGCACTCTGAACCCTGTGAG:W2(V813_D-1) and G:W-1(V834_D-1)
removing vertex G:W-1(V834_D-1) was concatenated into CAGCACTCTGAACCCTGTGAGG:W2(V813_D-1)
Want to move edge Edge(834->835,w:2.0)(G:W-1(V834_D-1)->C:W-1(V835_D-1)) to (CAGCACTCTGAACCCTGTGAGG:W2(V813_D-1)->C:W-1(V835_D-1)
	adding edge: CAGCACTCTGAACCCTGTGAGG:W2(V813_D-1) to C:W-1(V835_D-1)
removing edge Edge(834->835,w:2.0)(G:W-1(V834_D-1)->C:W-1(V835_D-1))
removing edge Edge(813->834,w:2.0)(CAGCACTCTGAACCCTGTGAGG:W2(V813_D-1)->G:W-1(V834_D-1))
Found potential edge: Edge(813->835,w:2.0) between CAGCACTCTGAACCCTGTGAGG:W2(V813_D-1) and C:W-1(V835_D-1)
removing vertex C:W-1(V835_D-1) was concatenated into CAGCACTCTGAACCCTGTGAGGC:W2(V813_D-1)
Want to move edge Edge(835->836,w:2.0)(C:W-1(V835_D-1)->A:W-1(V836_D-1)) to (CAGCACTCTGAACCCTGTGAGGC:W2(V813_D-1)->A:W-1(V836_D-1)
	adding edge: CAGCACTCTGAACCCTGTGAGGC:W2(V813_D-1) to A:W-1(V836_D-1)
removing edge Edge(835->836,w:2.0)(C:W-1(V835_D-1)->A:W-1(V836_D-1))
removing edge Edge(813->835,w:2.0)(CAGCACTCTGAACCCTGTGAGGC:W2(V813_D-1)->C:W-1(V835_D-1))
Found potential edge: Edge(813->836,w:2.0) between CAGCACTCTGAACCCTGTGAGGC:W2(V813_D-1) and A:W-1(V836_D-1)
removing vertex A:W-1(V836_D-1) was concatenated into CAGCACTCTGAACCCTGTGAGGCA:W2(V813_D-1)
Want to move edge Edge(836->549,w:2.0)(A:W-1(V836_D-1)->AGTCCACCAC...GGGAGCCACC:W6(V549_D-1)) to (CAGCACTCTGAACCCTGTGAGGCA:W2(V813_D-1)->AGTCCACCAC...GGGAGCCACC:W6(V549_D-1)
	adding edge: CAGCACTCTGAACCCTGTGAGGCA:W2(V813_D-1) to AGTCCACCAC...GGGAGCCACC:W6(V549_D-1)
removing edge Edge(836->549,w:2.0)(A:W-1(V836_D-1)->AGTCCACCAC...GGGAGCCACC:W6(V549_D-1))
removing edge Edge(813->836,w:2.0)(CAGCACTCTGAACCCTGTGAGGCA:W2(V813_D-1)->A:W-1(V836_D-1))
Found potential edge: Edge(885->886,w:2.0) between G:W-1(V885_D-1) and C:W-1(V886_D-1)
removing vertex C:W-1(V886_D-1) was concatenated into GC:W2(V885_D-1)
Want to move edge Edge(886->887,w:2.0)(C:W-1(V886_D-1)->T:W-1(V887_D-1)) to (GC:W2(V885_D-1)->T:W-1(V887_D-1)
	adding edge: GC:W2(V885_D-1) to T:W-1(V887_D-1)
removing edge Edge(886->887,w:2.0)(C:W-1(V886_D-1)->T:W-1(V887_D-1))
removing edge Edge(885->886,w:2.0)(GC:W2(V885_D-1)->C:W-1(V886_D-1))
Found potential edge: Edge(885->887,w:2.0) between GC:W2(V885_D-1) and T:W-1(V887_D-1)
removing vertex T:W-1(V887_D-1) was concatenated into GCT:W2(V885_D-1)
Want to move edge Edge(887->888,w:2.0)(T:W-1(V887_D-1)->C:W-1(V888_D-1)) to (GCT:W2(V885_D-1)->C:W-1(V888_D-1)
	adding edge: GCT:W2(V885_D-1) to C:W-1(V888_D-1)
removing edge Edge(887->888,w:2.0)(T:W-1(V887_D-1)->C:W-1(V888_D-1))
removing edge Edge(885->887,w:2.0)(GCT:W2(V885_D-1)->T:W-1(V887_D-1))
Found potential edge: Edge(885->888,w:2.0) between GCT:W2(V885_D-1) and C:W-1(V888_D-1)
removing vertex C:W-1(V888_D-1) was concatenated into GCTC:W2(V885_D-1)
Want to move edge Edge(888->889,w:2.0)(C:W-1(V888_D-1)->A:W-1(V889_D-1)) to (GCTC:W2(V885_D-1)->A:W-1(V889_D-1)
	adding edge: GCTC:W2(V885_D-1) to A:W-1(V889_D-1)
removing edge Edge(888->889,w:2.0)(C:W-1(V888_D-1)->A:W-1(V889_D-1))
removing edge Edge(885->888,w:2.0)(GCTC:W2(V885_D-1)->C:W-1(V888_D-1))
Found potential edge: Edge(885->889,w:2.0) between GCTC:W2(V885_D-1) and A:W-1(V889_D-1)
removing vertex A:W-1(V889_D-1) was concatenated into GCTCA:W2(V885_D-1)
Want to move edge Edge(889->890,w:2.0)(A:W-1(V889_D-1)->T:W-1(V890_D-1)) to (GCTCA:W2(V885_D-1)->T:W-1(V890_D-1)
	adding edge: GCTCA:W2(V885_D-1) to T:W-1(V890_D-1)
removing edge Edge(889->890,w:2.0)(A:W-1(V889_D-1)->T:W-1(V890_D-1))
removing edge Edge(885->889,w:2.0)(GCTCA:W2(V885_D-1)->A:W-1(V889_D-1))
Found potential edge: Edge(885->890,w:2.0) between GCTCA:W2(V885_D-1) and T:W-1(V890_D-1)
removing vertex T:W-1(V890_D-1) was concatenated into GCTCAT:W2(V885_D-1)
Want to move edge Edge(890->891,w:2.0)(T:W-1(V890_D-1)->C:W-1(V891_D-1)) to (GCTCAT:W2(V885_D-1)->C:W-1(V891_D-1)
	adding edge: GCTCAT:W2(V885_D-1) to C:W-1(V891_D-1)
removing edge Edge(890->891,w:2.0)(T:W-1(V890_D-1)->C:W-1(V891_D-1))
removing edge Edge(885->890,w:2.0)(GCTCAT:W2(V885_D-1)->T:W-1(V890_D-1))
Found potential edge: Edge(885->891,w:2.0) between GCTCAT:W2(V885_D-1) and C:W-1(V891_D-1)
removing vertex C:W-1(V891_D-1) was concatenated into GCTCATC:W2(V885_D-1)
Want to move edge Edge(891->892,w:2.0)(C:W-1(V891_D-1)->A:W-1(V892_D-1)) to (GCTCATC:W2(V885_D-1)->A:W-1(V892_D-1)
	adding edge: GCTCATC:W2(V885_D-1) to A:W-1(V892_D-1)
removing edge Edge(891->892,w:2.0)(C:W-1(V891_D-1)->A:W-1(V892_D-1))
removing edge Edge(885->891,w:2.0)(GCTCATC:W2(V885_D-1)->C:W-1(V891_D-1))
Found potential edge: Edge(885->892,w:2.0) between GCTCATC:W2(V885_D-1) and A:W-1(V892_D-1)
removing vertex A:W-1(V892_D-1) was concatenated into GCTCATCA:W2(V885_D-1)
Want to move edge Edge(892->893,w:2.0)(A:W-1(V892_D-1)->G:W-1(V893_D-1)) to (GCTCATCA:W2(V885_D-1)->G:W-1(V893_D-1)
	adding edge: GCTCATCA:W2(V885_D-1) to G:W-1(V893_D-1)
removing edge Edge(892->893,w:2.0)(A:W-1(V892_D-1)->G:W-1(V893_D-1))
removing edge Edge(885->892,w:2.0)(GCTCATCA:W2(V885_D-1)->A:W-1(V892_D-1))
Found potential edge: Edge(885->893,w:2.0) between GCTCATCA:W2(V885_D-1) and G:W-1(V893_D-1)
removing vertex G:W-1(V893_D-1) was concatenated into GCTCATCAG:W2(V885_D-1)
Want to move edge Edge(893->894,w:2.0)(G:W-1(V893_D-1)->C:W-1(V894_D-1)) to (GCTCATCAG:W2(V885_D-1)->C:W-1(V894_D-1)
	adding edge: GCTCATCAG:W2(V885_D-1) to C:W-1(V894_D-1)
removing edge Edge(893->894,w:2.0)(G:W-1(V893_D-1)->C:W-1(V894_D-1))
removing edge Edge(885->893,w:2.0)(GCTCATCAG:W2(V885_D-1)->G:W-1(V893_D-1))
Found potential edge: Edge(885->894,w:2.0) between GCTCATCAG:W2(V885_D-1) and C:W-1(V894_D-1)
removing vertex C:W-1(V894_D-1) was concatenated into GCTCATCAGC:W2(V885_D-1)
Want to move edge Edge(894->895,w:2.0)(C:W-1(V894_D-1)->A:W-1(V895_D-1)) to (GCTCATCAGC:W2(V885_D-1)->A:W-1(V895_D-1)
	adding edge: GCTCATCAGC:W2(V885_D-1) to A:W-1(V895_D-1)
removing edge Edge(894->895,w:2.0)(C:W-1(V894_D-1)->A:W-1(V895_D-1))
removing edge Edge(885->894,w:2.0)(GCTCATCAGC:W2(V885_D-1)->C:W-1(V894_D-1))
Found potential edge: Edge(885->895,w:2.0) between GCTCATCAGC:W2(V885_D-1) and A:W-1(V895_D-1)
removing vertex A:W-1(V895_D-1) was concatenated into GCTCATCAGCA:W2(V885_D-1)
Want to move edge Edge(895->896,w:2.0)(A:W-1(V895_D-1)->A:W-1(V896_D-1)) to (GCTCATCAGCA:W2(V885_D-1)->A:W-1(V896_D-1)
	adding edge: GCTCATCAGCA:W2(V885_D-1) to A:W-1(V896_D-1)
removing edge Edge(895->896,w:2.0)(A:W-1(V895_D-1)->A:W-1(V896_D-1))
removing edge Edge(885->895,w:2.0)(GCTCATCAGCA:W2(V885_D-1)->A:W-1(V895_D-1))
Found potential edge: Edge(885->896,w:2.0) between GCTCATCAGCA:W2(V885_D-1) and A:W-1(V896_D-1)
removing vertex A:W-1(V896_D-1) was concatenated into GCTCATCAGCAA:W2(V885_D-1)
Want to move edge Edge(896->897,w:2.0)(A:W-1(V896_D-1)->G:W-1(V897_D-1)) to (GCTCATCAGCAA:W2(V885_D-1)->G:W-1(V897_D-1)
	adding edge: GCTCATCAGCAA:W2(V885_D-1) to G:W-1(V897_D-1)
removing edge Edge(896->897,w:2.0)(A:W-1(V896_D-1)->G:W-1(V897_D-1))
removing edge Edge(885->896,w:2.0)(GCTCATCAGCAA:W2(V885_D-1)->A:W-1(V896_D-1))
Found potential edge: Edge(885->897,w:2.0) between GCTCATCAGCAA:W2(V885_D-1) and G:W-1(V897_D-1)
removing vertex G:W-1(V897_D-1) was concatenated into GCTCATCAGCAAG:W2(V885_D-1)
Want to move edge Edge(897->898,w:2.0)(G:W-1(V897_D-1)->A:W-1(V898_D-1)) to (GCTCATCAGCAAG:W2(V885_D-1)->A:W-1(V898_D-1)
	adding edge: GCTCATCAGCAAG:W2(V885_D-1) to A:W-1(V898_D-1)
removing edge Edge(897->898,w:2.0)(G:W-1(V897_D-1)->A:W-1(V898_D-1))
removing edge Edge(885->897,w:2.0)(GCTCATCAGCAAG:W2(V885_D-1)->G:W-1(V897_D-1))
Found potential edge: Edge(885->898,w:2.0) between GCTCATCAGCAAG:W2(V885_D-1) and A:W-1(V898_D-1)
removing vertex A:W-1(V898_D-1) was concatenated into GCTCATCAGCAAGA:W2(V885_D-1)
Want to move edge Edge(898->899,w:2.0)(A:W-1(V898_D-1)->A:W-1(V899_D-1)) to (GCTCATCAGCAAGA:W2(V885_D-1)->A:W-1(V899_D-1)
	adding edge: GCTCATCAGCAAGA:W2(V885_D-1) to A:W-1(V899_D-1)
removing edge Edge(898->899,w:2.0)(A:W-1(V898_D-1)->A:W-1(V899_D-1))
removing edge Edge(885->898,w:2.0)(GCTCATCAGCAAGA:W2(V885_D-1)->A:W-1(V898_D-1))
Found potential edge: Edge(885->899,w:2.0) between GCTCATCAGCAAGA:W2(V885_D-1) and A:W-1(V899_D-1)
removing vertex A:W-1(V899_D-1) was concatenated into GCTCATCAGCAAGAA:W2(V885_D-1)
Want to move edge Edge(899->900,w:2.0)(A:W-1(V899_D-1)->G:W-1(V900_D-1)) to (GCTCATCAGCAAGAA:W2(V885_D-1)->G:W-1(V900_D-1)
	adding edge: GCTCATCAGCAAGAA:W2(V885_D-1) to G:W-1(V900_D-1)
removing edge Edge(899->900,w:2.0)(A:W-1(V899_D-1)->G:W-1(V900_D-1))
removing edge Edge(885->899,w:2.0)(GCTCATCAGCAAGAA:W2(V885_D-1)->A:W-1(V899_D-1))
Found potential edge: Edge(885->900,w:2.0) between GCTCATCAGCAAGAA:W2(V885_D-1) and G:W-1(V900_D-1)
removing vertex G:W-1(V900_D-1) was concatenated into GCTCATCAGCAAGAAG:W2(V885_D-1)
Want to move edge Edge(900->901,w:2.0)(G:W-1(V900_D-1)->A:W-1(V901_D-1)) to (GCTCATCAGCAAGAAG:W2(V885_D-1)->A:W-1(V901_D-1)
	adding edge: GCTCATCAGCAAGAAG:W2(V885_D-1) to A:W-1(V901_D-1)
removing edge Edge(900->901,w:2.0)(G:W-1(V900_D-1)->A:W-1(V901_D-1))
removing edge Edge(885->900,w:2.0)(GCTCATCAGCAAGAAG:W2(V885_D-1)->G:W-1(V900_D-1))
Found potential edge: Edge(885->901,w:2.0) between GCTCATCAGCAAGAAG:W2(V885_D-1) and A:W-1(V901_D-1)
removing vertex A:W-1(V901_D-1) was concatenated into GCTCATCAGCAAGAAGA:W2(V885_D-1)
Want to move edge Edge(901->902,w:2.0)(A:W-1(V901_D-1)->A:W-1(V902_D-1)) to (GCTCATCAGCAAGAAGA:W2(V885_D-1)->A:W-1(V902_D-1)
	adding edge: GCTCATCAGCAAGAAGA:W2(V885_D-1) to A:W-1(V902_D-1)
removing edge Edge(901->902,w:2.0)(A:W-1(V901_D-1)->A:W-1(V902_D-1))
removing edge Edge(885->901,w:2.0)(GCTCATCAGCAAGAAGA:W2(V885_D-1)->A:W-1(V901_D-1))
Found potential edge: Edge(885->902,w:2.0) between GCTCATCAGCAAGAAGA:W2(V885_D-1) and A:W-1(V902_D-1)
removing vertex A:W-1(V902_D-1) was concatenated into GCTCATCAGCAAGAAGAA:W2(V885_D-1)
Want to move edge Edge(902->903,w:2.0)(A:W-1(V902_D-1)->A:W-1(V903_D-1)) to (GCTCATCAGCAAGAAGAA:W2(V885_D-1)->A:W-1(V903_D-1)
	adding edge: GCTCATCAGCAAGAAGAA:W2(V885_D-1) to A:W-1(V903_D-1)
removing edge Edge(902->903,w:2.0)(A:W-1(V902_D-1)->A:W-1(V903_D-1))
removing edge Edge(885->902,w:2.0)(GCTCATCAGCAAGAAGAA:W2(V885_D-1)->A:W-1(V902_D-1))
Found potential edge: Edge(885->903,w:2.0) between GCTCATCAGCAAGAAGAA:W2(V885_D-1) and A:W-1(V903_D-1)
removing vertex A:W-1(V903_D-1) was concatenated into GCTCATCAGCAAGAAGAAA:W2(V885_D-1)
Want to move edge Edge(903->904,w:2.0)(A:W-1(V903_D-1)->T:W-1(V904_D-1)) to (GCTCATCAGCAAGAAGAAA:W2(V885_D-1)->T:W-1(V904_D-1)
	adding edge: GCTCATCAGCAAGAAGAAA:W2(V885_D-1) to T:W-1(V904_D-1)
removing edge Edge(903->904,w:2.0)(A:W-1(V903_D-1)->T:W-1(V904_D-1))
removing edge Edge(885->903,w:2.0)(GCTCATCAGCAAGAAGAAA:W2(V885_D-1)->A:W-1(V903_D-1))
Found potential edge: Edge(885->904,w:2.0) between GCTCATCAGCAAGAAGAAA:W2(V885_D-1) and T:W-1(V904_D-1)
removing vertex T:W-1(V904_D-1) was concatenated into GCTCATCAGCAAGAAGAAAT:W2(V885_D-1)
Want to move edge Edge(904->905,w:2.0)(T:W-1(V904_D-1)->C:W-1(V905_D-1)) to (GCTCATCAGCAAGAAGAAAT:W2(V885_D-1)->C:W-1(V905_D-1)
	adding edge: GCTCATCAGCAAGAAGAAAT:W2(V885_D-1) to C:W-1(V905_D-1)
removing edge Edge(904->905,w:2.0)(T:W-1(V904_D-1)->C:W-1(V905_D-1))
removing edge Edge(885->904,w:2.0)(GCTCATCAGCAAGAAGAAAT:W2(V885_D-1)->T:W-1(V904_D-1))
Found potential edge: Edge(885->905,w:2.0) between GCTCATCAGCAAGAAGAAAT:W2(V885_D-1) and C:W-1(V905_D-1)
removing vertex C:W-1(V905_D-1) was concatenated into GCTCATCAGCAAGAAGAAATC:W2(V885_D-1)
Want to move edge Edge(905->906,w:2.0)(C:W-1(V905_D-1)->T:W-1(V906_D-1)) to (GCTCATCAGCAAGAAGAAATC:W2(V885_D-1)->T:W-1(V906_D-1)
	adding edge: GCTCATCAGCAAGAAGAAATC:W2(V885_D-1) to T:W-1(V906_D-1)
removing edge Edge(905->906,w:2.0)(C:W-1(V905_D-1)->T:W-1(V906_D-1))
removing edge Edge(885->905,w:2.0)(GCTCATCAGCAAGAAGAAATC:W2(V885_D-1)->C:W-1(V905_D-1))
Found potential edge: Edge(885->906,w:2.0) between GCTCATCAGCAAGAAGAAATC:W2(V885_D-1) and T:W-1(V906_D-1)
removing vertex T:W-1(V906_D-1) was concatenated into GCTCATCAGCAAGAAGAAATCT:W2(V885_D-1)
Want to move edge Edge(906->907,w:2.0)(T:W-1(V906_D-1)->T:W-1(V907_D-1)) to (GCTCATCAGCAAGAAGAAATCT:W2(V885_D-1)->T:W-1(V907_D-1)
	adding edge: GCTCATCAGCAAGAAGAAATCT:W2(V885_D-1) to T:W-1(V907_D-1)
removing edge Edge(906->907,w:2.0)(T:W-1(V906_D-1)->T:W-1(V907_D-1))
removing edge Edge(885->906,w:2.0)(GCTCATCAGCAAGAAGAAATCT:W2(V885_D-1)->T:W-1(V906_D-1))
Found potential edge: Edge(885->907,w:2.0) between GCTCATCAGCAAGAAGAAATCT:W2(V885_D-1) and T:W-1(V907_D-1)
removing vertex T:W-1(V907_D-1) was concatenated into GCTCATCAGCAAGAAGAAATCTT:W2(V885_D-1)
Want to move edge Edge(907->908,w:2.0)(T:W-1(V907_D-1)->T:W-1(V908_D-1)) to (GCTCATCAGCAAGAAGAAATCTT:W2(V885_D-1)->T:W-1(V908_D-1)
	adding edge: GCTCATCAGCAAGAAGAAATCTT:W2(V885_D-1) to T:W-1(V908_D-1)
removing edge Edge(907->908,w:2.0)(T:W-1(V907_D-1)->T:W-1(V908_D-1))
removing edge Edge(885->907,w:2.0)(GCTCATCAGCAAGAAGAAATCTT:W2(V885_D-1)->T:W-1(V907_D-1))
Found potential edge: Edge(885->908,w:2.0) between GCTCATCAGCAAGAAGAAATCTT:W2(V885_D-1) and T:W-1(V908_D-1)
removing vertex T:W-1(V908_D-1) was concatenated into GCTCATCAGCAAGAAGAAATCTTT:W2(V885_D-1)
Want to move edge Edge(908->440,w:2.0)(T:W-1(V908_D-1)->CTTTCCAAGTA:W8(V440_D-1)) to (GCTCATCAGCAAGAAGAAATCTTT:W2(V885_D-1)->CTTTCCAAGTA:W8(V440_D-1)
	adding edge: GCTCATCAGCAAGAAGAAATCTTT:W2(V885_D-1) to CTTTCCAAGTA:W8(V440_D-1)
removing edge Edge(908->440,w:2.0)(T:W-1(V908_D-1)->CTTTCCAAGTA:W8(V440_D-1))
removing edge Edge(885->908,w:2.0)(GCTCATCAGCAAGAAGAAATCTTT:W2(V885_D-1)->T:W-1(V908_D-1))
Found potential edge: Edge(945->946,w:2.0) between AGAATACAAAATGCCTTCCTCCAG:W0(V945_D-1) and C:W-1(V946_D-1)
removing vertex C:W-1(V946_D-1) was concatenated into AGAATACAAAATGCCTTCCTCCAGC:W0(V945_D-1)
Want to move edge Edge(946->947,w:2.0)(C:W-1(V946_D-1)->C:W-1(V947_D-1)) to (AGAATACAAAATGCCTTCCTCCAGC:W0(V945_D-1)->C:W-1(V947_D-1)
	adding edge: AGAATACAAAATGCCTTCCTCCAGC:W0(V945_D-1) to C:W-1(V947_D-1)
removing edge Edge(946->947,w:2.0)(C:W-1(V946_D-1)->C:W-1(V947_D-1))
removing edge Edge(945->946,w:2.0)(AGAATACAAAATGCCTTCCTCCAGC:W0(V945_D-1)->C:W-1(V946_D-1))
Found potential edge: Edge(945->947,w:2.0) between AGAATACAAAATGCCTTCCTCCAGC:W0(V945_D-1) and C:W-1(V947_D-1)
removing vertex C:W-1(V947_D-1) was concatenated into AGAATACAAAATGCCTTCCTCCAGCC:W0(V945_D-1)
Want to move edge Edge(947->948,w:2.0)(C:W-1(V947_D-1)->T:W-1(V948_D-1)) to (AGAATACAAAATGCCTTCCTCCAGCC:W0(V945_D-1)->T:W-1(V948_D-1)
	adding edge: AGAATACAAAATGCCTTCCTCCAGCC:W0(V945_D-1) to T:W-1(V948_D-1)
removing edge Edge(947->948,w:2.0)(C:W-1(V947_D-1)->T:W-1(V948_D-1))
removing edge Edge(945->947,w:2.0)(AGAATACAAAATGCCTTCCTCCAGCC:W0(V945_D-1)->C:W-1(V947_D-1))
Found potential edge: Edge(945->948,w:2.0) between AGAATACAAAATGCCTTCCTCCAGCC:W0(V945_D-1) and T:W-1(V948_D-1)
removing vertex T:W-1(V948_D-1) was concatenated into AGAATACAAAATGCCTTCCTCCAGCCT:W0(V945_D-1)
Want to move edge Edge(948->949,w:2.0)(T:W-1(V948_D-1)->C:W-1(V949_D-1)) to (AGAATACAAAATGCCTTCCTCCAGCCT:W0(V945_D-1)->C:W-1(V949_D-1)
	adding edge: AGAATACAAAATGCCTTCCTCCAGCCT:W0(V945_D-1) to C:W-1(V949_D-1)
removing edge Edge(948->949,w:2.0)(T:W-1(V948_D-1)->C:W-1(V949_D-1))
removing edge Edge(945->948,w:2.0)(AGAATACAAAATGCCTTCCTCCAGCCT:W0(V945_D-1)->T:W-1(V948_D-1))
Found potential edge: Edge(945->949,w:2.0) between AGAATACAAAATGCCTTCCTCCAGCCT:W0(V945_D-1) and C:W-1(V949_D-1)
removing vertex C:W-1(V949_D-1) was concatenated into AGAATACAAAATGCCTTCCTCCAGCCTC:W0(V945_D-1)
Want to move edge Edge(949->950,w:2.0)(C:W-1(V949_D-1)->A:W-1(V950_D-1)) to (AGAATACAAAATGCCTTCCTCCAGCCTC:W0(V945_D-1)->A:W-1(V950_D-1)
	adding edge: AGAATACAAAATGCCTTCCTCCAGCCTC:W0(V945_D-1) to A:W-1(V950_D-1)
removing edge Edge(949->950,w:2.0)(C:W-1(V949_D-1)->A:W-1(V950_D-1))
removing edge Edge(945->949,w:2.0)(AGAATACAAAATGCCTTCCTCCAGCCTC:W0(V945_D-1)->C:W-1(V949_D-1))
Found potential edge: Edge(945->950,w:2.0) between AGAATACAAAATGCCTTCCTCCAGCCTC:W0(V945_D-1) and A:W-1(V950_D-1)
removing vertex A:W-1(V950_D-1) was concatenated into AGAATACAAAATGCCTTCCTCCAGCCTCA:W0(V945_D-1)
Want to move edge Edge(950->951,w:2.0)(A:W-1(V950_D-1)->T:W-1(V951_D-1)) to (AGAATACAAAATGCCTTCCTCCAGCCTCA:W0(V945_D-1)->T:W-1(V951_D-1)
	adding edge: AGAATACAAAATGCCTTCCTCCAGCCTCA:W0(V945_D-1) to T:W-1(V951_D-1)
removing edge Edge(950->951,w:2.0)(A:W-1(V950_D-1)->T:W-1(V951_D-1))
removing edge Edge(945->950,w:2.0)(AGAATACAAAATGCCTTCCTCCAGCCTCA:W0(V945_D-1)->A:W-1(V950_D-1))
Found potential edge: Edge(945->951,w:2.0) between AGAATACAAAATGCCTTCCTCCAGCCTCA:W0(V945_D-1) and T:W-1(V951_D-1)
removing vertex T:W-1(V951_D-1) was concatenated into AGAATACAAAATGCCTTCCTCCAGCCTCAT:W0(V945_D-1)
Want to move edge Edge(951->952,w:2.0)(T:W-1(V951_D-1)->C:W-1(V952_D-1)) to (AGAATACAAAATGCCTTCCTCCAGCCTCAT:W0(V945_D-1)->C:W-1(V952_D-1)
	adding edge: AGAATACAAAATGCCTTCCTCCAGCCTCAT:W0(V945_D-1) to C:W-1(V952_D-1)
removing edge Edge(951->952,w:2.0)(T:W-1(V951_D-1)->C:W-1(V952_D-1))
removing edge Edge(945->951,w:2.0)(AGAATACAAAATGCCTTCCTCCAGCCTCAT:W0(V945_D-1)->T:W-1(V951_D-1))
Found potential edge: Edge(945->952,w:2.0) between AGAATACAAAATGCCTTCCTCCAGCCTCAT:W0(V945_D-1) and C:W-1(V952_D-1)
removing vertex C:W-1(V952_D-1) was concatenated into AGAATACAAA...CAGCCTCATC:W0(V945_D-1)
Want to move edge Edge(952->953,w:2.0)(C:W-1(V952_D-1)->A:W-1(V953_D-1)) to (AGAATACAAA...CAGCCTCATC:W0(V945_D-1)->A:W-1(V953_D-1)
	adding edge: AGAATACAAA...CAGCCTCATC:W0(V945_D-1) to A:W-1(V953_D-1)
removing edge Edge(952->953,w:2.0)(C:W-1(V952_D-1)->A:W-1(V953_D-1))
removing edge Edge(945->952,w:2.0)(AGAATACAAA...CAGCCTCATC:W0(V945_D-1)->C:W-1(V952_D-1))
Found potential edge: Edge(945->953,w:2.0) between AGAATACAAA...CAGCCTCATC:W0(V945_D-1) and A:W-1(V953_D-1)
removing vertex A:W-1(V953_D-1) was concatenated into AGAATACAAA...AGCCTCATCA:W1(V945_D-1)
Want to move edge Edge(953->954,w:2.0)(A:W-1(V953_D-1)->G:W-1(V954_D-1)) to (AGAATACAAA...AGCCTCATCA:W1(V945_D-1)->G:W-1(V954_D-1)
	adding edge: AGAATACAAA...AGCCTCATCA:W1(V945_D-1) to G:W-1(V954_D-1)
removing edge Edge(953->954,w:2.0)(A:W-1(V953_D-1)->G:W-1(V954_D-1))
removing edge Edge(945->953,w:2.0)(AGAATACAAA...AGCCTCATCA:W1(V945_D-1)->A:W-1(V953_D-1))
Found potential edge: Edge(945->954,w:2.0) between AGAATACAAA...AGCCTCATCA:W1(V945_D-1) and G:W-1(V954_D-1)
removing vertex G:W-1(V954_D-1) was concatenated into AGAATACAAA...GCCTCATCAG:W1(V945_D-1)
Want to move edge Edge(954->955,w:2.0)(G:W-1(V954_D-1)->C:W-1(V955_D-1)) to (AGAATACAAA...GCCTCATCAG:W1(V945_D-1)->C:W-1(V955_D-1)
	adding edge: AGAATACAAA...GCCTCATCAG:W1(V945_D-1) to C:W-1(V955_D-1)
removing edge Edge(954->955,w:2.0)(G:W-1(V954_D-1)->C:W-1(V955_D-1))
removing edge Edge(945->954,w:2.0)(AGAATACAAA...GCCTCATCAG:W1(V945_D-1)->G:W-1(V954_D-1))
Found potential edge: Edge(945->955,w:2.0) between AGAATACAAA...GCCTCATCAG:W1(V945_D-1) and C:W-1(V955_D-1)
removing vertex C:W-1(V955_D-1) was concatenated into AGAATACAAA...CCTCATCAGC:W1(V945_D-1)
Want to move edge Edge(955->956,w:2.0)(C:W-1(V955_D-1)->A:W-1(V956_D-1)) to (AGAATACAAA...CCTCATCAGC:W1(V945_D-1)->A:W-1(V956_D-1)
	adding edge: AGAATACAAA...CCTCATCAGC:W1(V945_D-1) to A:W-1(V956_D-1)
removing edge Edge(955->956,w:2.0)(C:W-1(V955_D-1)->A:W-1(V956_D-1))
removing edge Edge(945->955,w:2.0)(AGAATACAAA...CCTCATCAGC:W1(V945_D-1)->C:W-1(V955_D-1))
Found potential edge: Edge(945->956,w:2.0) between AGAATACAAA...CCTCATCAGC:W1(V945_D-1) and A:W-1(V956_D-1)
removing vertex A:W-1(V956_D-1) was concatenated into AGAATACAAA...CTCATCAGCA:W1(V945_D-1)
Want to move edge Edge(956->957,w:2.0)(A:W-1(V956_D-1)->G:W-1(V957_D-1)) to (AGAATACAAA...CTCATCAGCA:W1(V945_D-1)->G:W-1(V957_D-1)
	adding edge: AGAATACAAA...CTCATCAGCA:W1(V945_D-1) to G:W-1(V957_D-1)
removing edge Edge(956->957,w:2.0)(A:W-1(V956_D-1)->G:W-1(V957_D-1))
removing edge Edge(945->956,w:2.0)(AGAATACAAA...CTCATCAGCA:W1(V945_D-1)->A:W-1(V956_D-1))
Found potential edge: Edge(945->957,w:2.0) between AGAATACAAA...CTCATCAGCA:W1(V945_D-1) and G:W-1(V957_D-1)
removing vertex G:W-1(V957_D-1) was concatenated into AGAATACAAA...TCATCAGCAG:W1(V945_D-1)
Want to move edge Edge(957->958,w:2.0)(G:W-1(V957_D-1)->G:W-1(V958_D-1)) to (AGAATACAAA...TCATCAGCAG:W1(V945_D-1)->G:W-1(V958_D-1)
	adding edge: AGAATACAAA...TCATCAGCAG:W1(V945_D-1) to G:W-1(V958_D-1)
removing edge Edge(957->958,w:2.0)(G:W-1(V957_D-1)->G:W-1(V958_D-1))
removing edge Edge(945->957,w:2.0)(AGAATACAAA...TCATCAGCAG:W1(V945_D-1)->G:W-1(V957_D-1))
Found potential edge: Edge(945->958,w:2.0) between AGAATACAAA...TCATCAGCAG:W1(V945_D-1) and G:W-1(V958_D-1)
removing vertex G:W-1(V958_D-1) was concatenated into AGAATACAAA...CATCAGCAGG:W1(V945_D-1)
Want to move edge Edge(958->959,w:2.0)(G:W-1(V958_D-1)->A:W-1(V959_D-1)) to (AGAATACAAA...CATCAGCAGG:W1(V945_D-1)->A:W-1(V959_D-1)
	adding edge: AGAATACAAA...CATCAGCAGG:W1(V945_D-1) to A:W-1(V959_D-1)
removing edge Edge(958->959,w:2.0)(G:W-1(V958_D-1)->A:W-1(V959_D-1))
removing edge Edge(945->958,w:2.0)(AGAATACAAA...CATCAGCAGG:W1(V945_D-1)->G:W-1(V958_D-1))
Found potential edge: Edge(945->959,w:2.0) between AGAATACAAA...CATCAGCAGG:W1(V945_D-1) and A:W-1(V959_D-1)
removing vertex A:W-1(V959_D-1) was concatenated into AGAATACAAA...ATCAGCAGGA:W1(V945_D-1)
Want to move edge Edge(959->960,w:2.0)(A:W-1(V959_D-1)->A:W-1(V960_D-1)) to (AGAATACAAA...ATCAGCAGGA:W1(V945_D-1)->A:W-1(V960_D-1)
	adding edge: AGAATACAAA...ATCAGCAGGA:W1(V945_D-1) to A:W-1(V960_D-1)
removing edge Edge(959->960,w:2.0)(A:W-1(V959_D-1)->A:W-1(V960_D-1))
removing edge Edge(945->959,w:2.0)(AGAATACAAA...ATCAGCAGGA:W1(V945_D-1)->A:W-1(V959_D-1))
Found potential edge: Edge(945->960,w:2.0) between AGAATACAAA...ATCAGCAGGA:W1(V945_D-1) and A:W-1(V960_D-1)
removing vertex A:W-1(V960_D-1) was concatenated into AGAATACAAA...TCAGCAGGAA:W1(V945_D-1)
Want to move edge Edge(960->961,w:2.0)(A:W-1(V960_D-1)->G:W-1(V961_D-1)) to (AGAATACAAA...TCAGCAGGAA:W1(V945_D-1)->G:W-1(V961_D-1)
	adding edge: AGAATACAAA...TCAGCAGGAA:W1(V945_D-1) to G:W-1(V961_D-1)
removing edge Edge(960->961,w:2.0)(A:W-1(V960_D-1)->G:W-1(V961_D-1))
removing edge Edge(945->960,w:2.0)(AGAATACAAA...TCAGCAGGAA:W1(V945_D-1)->A:W-1(V960_D-1))
Found potential edge: Edge(945->961,w:2.0) between AGAATACAAA...TCAGCAGGAA:W1(V945_D-1) and G:W-1(V961_D-1)
removing vertex G:W-1(V961_D-1) was concatenated into AGAATACAAA...CAGCAGGAAG:W1(V945_D-1)
Want to move edge Edge(961->962,w:2.0)(G:W-1(V961_D-1)->A:W-1(V962_D-1)) to (AGAATACAAA...CAGCAGGAAG:W1(V945_D-1)->A:W-1(V962_D-1)
	adding edge: AGAATACAAA...CAGCAGGAAG:W1(V945_D-1) to A:W-1(V962_D-1)
removing edge Edge(961->962,w:2.0)(G:W-1(V961_D-1)->A:W-1(V962_D-1))
removing edge Edge(945->961,w:2.0)(AGAATACAAA...CAGCAGGAAG:W1(V945_D-1)->G:W-1(V961_D-1))
Found potential edge: Edge(945->962,w:2.0) between AGAATACAAA...CAGCAGGAAG:W1(V945_D-1) and A:W-1(V962_D-1)
removing vertex A:W-1(V962_D-1) was concatenated into AGAATACAAA...AGCAGGAAGA:W1(V945_D-1)
Want to move edge Edge(962->963,w:2.0)(A:W-1(V962_D-1)->A:W-1(V963_D-1)) to (AGAATACAAA...AGCAGGAAGA:W1(V945_D-1)->A:W-1(V963_D-1)
	adding edge: AGAATACAAA...AGCAGGAAGA:W1(V945_D-1) to A:W-1(V963_D-1)
removing edge Edge(962->963,w:2.0)(A:W-1(V962_D-1)->A:W-1(V963_D-1))
removing edge Edge(945->962,w:2.0)(AGAATACAAA...AGCAGGAAGA:W1(V945_D-1)->A:W-1(V962_D-1))
Found potential edge: Edge(945->963,w:2.0) between AGAATACAAA...AGCAGGAAGA:W1(V945_D-1) and A:W-1(V963_D-1)
removing vertex A:W-1(V963_D-1) was concatenated into AGAATACAAA...GCAGGAAGAA:W1(V945_D-1)
Want to move edge Edge(963->964,w:2.0)(A:W-1(V963_D-1)->A:W-1(V964_D-1)) to (AGAATACAAA...GCAGGAAGAA:W1(V945_D-1)->A:W-1(V964_D-1)
	adding edge: AGAATACAAA...GCAGGAAGAA:W1(V945_D-1) to A:W-1(V964_D-1)
removing edge Edge(963->964,w:2.0)(A:W-1(V963_D-1)->A:W-1(V964_D-1))
removing edge Edge(945->963,w:2.0)(AGAATACAAA...GCAGGAAGAA:W1(V945_D-1)->A:W-1(V963_D-1))
Found potential edge: Edge(945->964,w:2.0) between AGAATACAAA...GCAGGAAGAA:W1(V945_D-1) and A:W-1(V964_D-1)
removing vertex A:W-1(V964_D-1) was concatenated into AGAATACAAA...CAGGAAGAAA:W1(V945_D-1)
Want to move edge Edge(964->965,w:2.0)(A:W-1(V964_D-1)->T:W-1(V965_D-1)) to (AGAATACAAA...CAGGAAGAAA:W1(V945_D-1)->T:W-1(V965_D-1)
	adding edge: AGAATACAAA...CAGGAAGAAA:W1(V945_D-1) to T:W-1(V965_D-1)
removing edge Edge(964->965,w:2.0)(A:W-1(V964_D-1)->T:W-1(V965_D-1))
removing edge Edge(945->964,w:2.0)(AGAATACAAA...CAGGAAGAAA:W1(V945_D-1)->A:W-1(V964_D-1))
Found potential edge: Edge(945->965,w:2.0) between AGAATACAAA...CAGGAAGAAA:W1(V945_D-1) and T:W-1(V965_D-1)
removing vertex T:W-1(V965_D-1) was concatenated into AGAATACAAA...AGGAAGAAAT:W1(V945_D-1)
Want to move edge Edge(965->966,w:2.0)(T:W-1(V965_D-1)->C:W-1(V966_D-1)) to (AGAATACAAA...AGGAAGAAAT:W1(V945_D-1)->C:W-1(V966_D-1)
	adding edge: AGAATACAAA...AGGAAGAAAT:W1(V945_D-1) to C:W-1(V966_D-1)
removing edge Edge(965->966,w:2.0)(T:W-1(V965_D-1)->C:W-1(V966_D-1))
removing edge Edge(945->965,w:2.0)(AGAATACAAA...AGGAAGAAAT:W1(V945_D-1)->T:W-1(V965_D-1))
Found potential edge: Edge(945->966,w:2.0) between AGAATACAAA...AGGAAGAAAT:W1(V945_D-1) and C:W-1(V966_D-1)
removing vertex C:W-1(V966_D-1) was concatenated into AGAATACAAA...GGAAGAAATC:W1(V945_D-1)
Want to move edge Edge(966->967,w:2.0)(C:W-1(V966_D-1)->T:W-1(V967_D-1)) to (AGAATACAAA...GGAAGAAATC:W1(V945_D-1)->T:W-1(V967_D-1)
	adding edge: AGAATACAAA...GGAAGAAATC:W1(V945_D-1) to T:W-1(V967_D-1)
removing edge Edge(966->967,w:2.0)(C:W-1(V966_D-1)->T:W-1(V967_D-1))
removing edge Edge(945->966,w:2.0)(AGAATACAAA...GGAAGAAATC:W1(V945_D-1)->C:W-1(V966_D-1))
Found potential edge: Edge(945->967,w:2.0) between AGAATACAAA...GGAAGAAATC:W1(V945_D-1) and T:W-1(V967_D-1)
removing vertex T:W-1(V967_D-1) was concatenated into AGAATACAAA...GAAGAAATCT:W1(V945_D-1)
Want to move edge Edge(967->968,w:2.0)(T:W-1(V967_D-1)->T:W-1(V968_D-1)) to (AGAATACAAA...GAAGAAATCT:W1(V945_D-1)->T:W-1(V968_D-1)
	adding edge: AGAATACAAA...GAAGAAATCT:W1(V945_D-1) to T:W-1(V968_D-1)
removing edge Edge(967->968,w:2.0)(T:W-1(V967_D-1)->T:W-1(V968_D-1))
removing edge Edge(945->967,w:2.0)(AGAATACAAA...GAAGAAATCT:W1(V945_D-1)->T:W-1(V967_D-1))
Found potential edge: Edge(945->968,w:2.0) between AGAATACAAA...GAAGAAATCT:W1(V945_D-1) and T:W-1(V968_D-1)
removing vertex T:W-1(V968_D-1) was concatenated into AGAATACAAA...AAGAAATCTT:W1(V945_D-1)
Want to move edge Edge(968->969,w:2.0)(T:W-1(V968_D-1)->T:W-1(V969_D-1)) to (AGAATACAAA...AAGAAATCTT:W1(V945_D-1)->T:W-1(V969_D-1)
	adding edge: AGAATACAAA...AAGAAATCTT:W1(V945_D-1) to T:W-1(V969_D-1)
removing edge Edge(968->969,w:2.0)(T:W-1(V968_D-1)->T:W-1(V969_D-1))
removing edge Edge(945->968,w:2.0)(AGAATACAAA...AAGAAATCTT:W1(V945_D-1)->T:W-1(V968_D-1))
Found potential edge: Edge(945->969,w:2.0) between AGAATACAAA...AAGAAATCTT:W1(V945_D-1) and T:W-1(V969_D-1)
removing vertex T:W-1(V969_D-1) was concatenated into AGAATACAAA...AGAAATCTTT:W1(V945_D-1)
Want to move edge Edge(969->970,w:2.0)(T:W-1(V969_D-1)->C:W-1(V970_D-1)) to (AGAATACAAA...AGAAATCTTT:W1(V945_D-1)->C:W-1(V970_D-1)
	adding edge: AGAATACAAA...AGAAATCTTT:W1(V945_D-1) to C:W-1(V970_D-1)
removing edge Edge(969->970,w:2.0)(T:W-1(V969_D-1)->C:W-1(V970_D-1))
removing edge Edge(945->969,w:2.0)(AGAATACAAA...AGAAATCTTT:W1(V945_D-1)->T:W-1(V969_D-1))
Found potential edge: Edge(945->970,w:2.0) between AGAATACAAA...AGAAATCTTT:W1(V945_D-1) and C:W-1(V970_D-1)
removing vertex C:W-1(V970_D-1) was concatenated into AGAATACAAA...GAAATCTTTC:W1(V945_D-1)
Want to move edge Edge(970->971,w:2.0)(C:W-1(V970_D-1)->T:W-1(V971_D-1)) to (AGAATACAAA...GAAATCTTTC:W1(V945_D-1)->T:W-1(V971_D-1)
	adding edge: AGAATACAAA...GAAATCTTTC:W1(V945_D-1) to T:W-1(V971_D-1)
removing edge Edge(970->971,w:2.0)(C:W-1(V970_D-1)->T:W-1(V971_D-1))
removing edge Edge(945->970,w:2.0)(AGAATACAAA...GAAATCTTTC:W1(V945_D-1)->C:W-1(V970_D-1))
Found potential edge: Edge(945->971,w:2.0) between AGAATACAAA...GAAATCTTTC:W1(V945_D-1) and T:W-1(V971_D-1)
removing vertex T:W-1(V971_D-1) was concatenated into AGAATACAAA...AAATCTTTCT:W1(V945_D-1)
Want to move edge Edge(971->972,w:2.0)(T:W-1(V971_D-1)->T:W-1(V972_D-1)) to (AGAATACAAA...AAATCTTTCT:W1(V945_D-1)->T:W-1(V972_D-1)
	adding edge: AGAATACAAA...AAATCTTTCT:W1(V945_D-1) to T:W-1(V972_D-1)
removing edge Edge(971->972,w:2.0)(T:W-1(V971_D-1)->T:W-1(V972_D-1))
removing edge Edge(945->971,w:2.0)(AGAATACAAA...AAATCTTTCT:W1(V945_D-1)->T:W-1(V971_D-1))
Found potential edge: Edge(945->972,w:2.0) between AGAATACAAA...AAATCTTTCT:W1(V945_D-1) and T:W-1(V972_D-1)
removing vertex T:W-1(V972_D-1) was concatenated into AGAATACAAA...AATCTTTCTT:W1(V945_D-1)
Want to move edge Edge(972->973,w:2.0)(T:W-1(V972_D-1)->T:W-1(V973_D-1)) to (AGAATACAAA...AATCTTTCTT:W1(V945_D-1)->T:W-1(V973_D-1)
	adding edge: AGAATACAAA...AATCTTTCTT:W1(V945_D-1) to T:W-1(V973_D-1)
removing edge Edge(972->973,w:2.0)(T:W-1(V972_D-1)->T:W-1(V973_D-1))
removing edge Edge(945->972,w:2.0)(AGAATACAAA...AATCTTTCTT:W1(V945_D-1)->T:W-1(V972_D-1))
Found potential edge: Edge(945->973,w:2.0) between AGAATACAAA...AATCTTTCTT:W1(V945_D-1) and T:W-1(V973_D-1)
removing vertex T:W-1(V973_D-1) was concatenated into AGAATACAAA...ATCTTTCTTT:W1(V945_D-1)
Want to move edge Edge(973->974,w:2.0)(T:W-1(V973_D-1)->C:W-1(V974_D-1)) to (AGAATACAAA...ATCTTTCTTT:W1(V945_D-1)->C:W-1(V974_D-1)
	adding edge: AGAATACAAA...ATCTTTCTTT:W1(V945_D-1) to C:W-1(V974_D-1)
removing edge Edge(973->974,w:2.0)(T:W-1(V973_D-1)->C:W-1(V974_D-1))
removing edge Edge(945->973,w:2.0)(AGAATACAAA...ATCTTTCTTT:W1(V945_D-1)->T:W-1(V973_D-1))
Found potential edge: Edge(945->974,w:2.0) between AGAATACAAA...ATCTTTCTTT:W1(V945_D-1) and C:W-1(V974_D-1)
removing vertex C:W-1(V974_D-1) was concatenated into AGAATACAAA...TCTTTCTTTC:W1(V945_D-1)
Want to move edge Edge(974->975,w:2.0)(C:W-1(V974_D-1)->C:W-1(V975_D-1)) to (AGAATACAAA...TCTTTCTTTC:W1(V945_D-1)->C:W-1(V975_D-1)
	adding edge: AGAATACAAA...TCTTTCTTTC:W1(V945_D-1) to C:W-1(V975_D-1)
removing edge Edge(974->975,w:2.0)(C:W-1(V974_D-1)->C:W-1(V975_D-1))
removing edge Edge(945->974,w:2.0)(AGAATACAAA...TCTTTCTTTC:W1(V945_D-1)->C:W-1(V974_D-1))
Found potential edge: Edge(945->975,w:2.0) between AGAATACAAA...TCTTTCTTTC:W1(V945_D-1) and C:W-1(V975_D-1)
removing vertex C:W-1(V975_D-1) was concatenated into AGAATACAAA...CTTTCTTTCC:W1(V945_D-1)
Want to move edge Edge(975->976,w:2.0)(C:W-1(V975_D-1)->A:W-1(V976_D-1)) to (AGAATACAAA...CTTTCTTTCC:W1(V945_D-1)->A:W-1(V976_D-1)
	adding edge: AGAATACAAA...CTTTCTTTCC:W1(V945_D-1) to A:W-1(V976_D-1)
removing edge Edge(975->976,w:2.0)(C:W-1(V975_D-1)->A:W-1(V976_D-1))
removing edge Edge(945->975,w:2.0)(AGAATACAAA...CTTTCTTTCC:W1(V945_D-1)->C:W-1(V975_D-1))
Found potential edge: Edge(945->976,w:2.0) between AGAATACAAA...CTTTCTTTCC:W1(V945_D-1) and A:W-1(V976_D-1)
removing vertex A:W-1(V976_D-1) was concatenated into AGAATACAAA...TTTCTTTCCA:W1(V945_D-1)
Want to move edge Edge(976->977,w:2.0)(A:W-1(V976_D-1)->A:W-1(V977_D-1)) to (AGAATACAAA...TTTCTTTCCA:W1(V945_D-1)->A:W-1(V977_D-1)
	adding edge: AGAATACAAA...TTTCTTTCCA:W1(V945_D-1) to A:W-1(V977_D-1)
removing edge Edge(976->977,w:2.0)(A:W-1(V976_D-1)->A:W-1(V977_D-1))
removing edge Edge(945->976,w:2.0)(AGAATACAAA...TTTCTTTCCA:W1(V945_D-1)->A:W-1(V976_D-1))
Found potential edge: Edge(945->977,w:2.0) between AGAATACAAA...TTTCTTTCCA:W1(V945_D-1) and A:W-1(V977_D-1)
removing vertex A:W-1(V977_D-1) was concatenated into AGAATACAAA...TTCTTTCCAA:W1(V945_D-1)
Want to move edge Edge(977->978,w:2.0)(A:W-1(V977_D-1)->G:W-1(V978_D-1)) to (AGAATACAAA...TTCTTTCCAA:W1(V945_D-1)->G:W-1(V978_D-1)
	adding edge: AGAATACAAA...TTCTTTCCAA:W1(V945_D-1) to G:W-1(V978_D-1)
removing edge Edge(977->978,w:2.0)(A:W-1(V977_D-1)->G:W-1(V978_D-1))
removing edge Edge(945->977,w:2.0)(AGAATACAAA...TTCTTTCCAA:W1(V945_D-1)->A:W-1(V977_D-1))
Found potential edge: Edge(945->978,w:2.0) between AGAATACAAA...TTCTTTCCAA:W1(V945_D-1) and G:W-1(V978_D-1)
removing vertex G:W-1(V978_D-1) was concatenated into AGAATACAAA...TCTTTCCAAG:W1(V945_D-1)
Want to move edge Edge(978->979,w:2.0)(G:W-1(V978_D-1)->T:W-1(V979_D-1)) to (AGAATACAAA...TCTTTCCAAG:W1(V945_D-1)->T:W-1(V979_D-1)
	adding edge: AGAATACAAA...TCTTTCCAAG:W1(V945_D-1) to T:W-1(V979_D-1)
removing edge Edge(978->979,w:2.0)(G:W-1(V978_D-1)->T:W-1(V979_D-1))
removing edge Edge(945->978,w:2.0)(AGAATACAAA...TCTTTCCAAG:W1(V945_D-1)->G:W-1(V978_D-1))
Found potential edge: Edge(945->979,w:2.0) between AGAATACAAA...TCTTTCCAAG:W1(V945_D-1) and T:W-1(V979_D-1)
removing vertex T:W-1(V979_D-1) was concatenated into AGAATACAAA...CTTTCCAAGT:W1(V945_D-1)
Want to move edge Edge(979->980,w:2.0)(T:W-1(V979_D-1)->A:W-1(V980_D-1)) to (AGAATACAAA...CTTTCCAAGT:W1(V945_D-1)->A:W-1(V980_D-1)
	adding edge: AGAATACAAA...CTTTCCAAGT:W1(V945_D-1) to A:W-1(V980_D-1)
removing edge Edge(979->980,w:2.0)(T:W-1(V979_D-1)->A:W-1(V980_D-1))
removing edge Edge(945->979,w:2.0)(AGAATACAAA...CTTTCCAAGT:W1(V945_D-1)->T:W-1(V979_D-1))
Found potential edge: Edge(945->980,w:2.0) between AGAATACAAA...CTTTCCAAGT:W1(V945_D-1) and A:W-1(V980_D-1)
removing vertex A:W-1(V980_D-1) was concatenated into AGAATACAAA...TTTCCAAGTA:W1(V945_D-1)
Want to move edge Edge(980->451,w:2.0)(A:W-1(V980_D-1)->GTGTCTTAAC...GAAGCTCCCT:W6(V451_D-1)) to (AGAATACAAA...TTTCCAAGTA:W1(V945_D-1)->GTGTCTTAAC...GAAGCTCCCT:W6(V451_D-1)
	adding edge: AGAATACAAA...TTTCCAAGTA:W1(V945_D-1) to GTGTCTTAAC...GAAGCTCCCT:W6(V451_D-1)
removing edge Edge(980->451,w:2.0)(A:W-1(V980_D-1)->GTGTCTTAAC...GAAGCTCCCT:W6(V451_D-1))
removing edge Edge(945->980,w:2.0)(AGAATACAAA...TTTCCAAGTA:W1(V945_D-1)->A:W-1(V980_D-1))
## Node descriptions after linear compaction:
## Node descriptions:
GGCCACACGA...CTTCCTCAAG:W2(V380_D-1) Preds: [] Succ: [CCTCATCAGCAAGAAGAAATCTTT:W7(V416_D-1) GCTCATCAGCAAGAAGAAATCTTT:W2(V885_D-1) ]
CCTCATCAGCAAGAAGAAATCTTT:W7(V416_D-1) Preds: [GGCCACACGA...CTTCCTCAAG:W2(V380_D-1) ] Succ: [CTTTCCAAGTA:W8(V440_D-1) ]
CTTTCCAAGTA:W8(V440_D-1) Preds: [CCTCATCAGCAAGAAGAAATCTTT:W7(V416_D-1) GCTCATCAGCAAGAAGAAATCTTT:W2(V885_D-1) ] Succ: [GTGTCTTAAC...GAAGCTCCCT:W6(V451_D-1) ]
GTGTCTTAAC...GAAGCTCCCT:W6(V451_D-1) Preds: [AGAATACAAA...TTTCCAAGTA:W1(V945_D-1) CTTTCCAAGTA:W8(V440_D-1) ] Succ: [GAGCACTCTGAACCCTGTGAGGCA:W6(V525_D-1) CAGCACTCTGAACCCTGTGAGGCA:W2(V813_D-1) ]
GAGCACTCTGAACCCTGTGAGGCA:W6(V525_D-1) Preds: [GTGTCTTAAC...GAAGCTCCCT:W6(V451_D-1) ] Succ: [AGTCCACCAC...GGGAGCCACC:W6(V549_D-1) ]
AGTCCACCAC...GGGAGCCACC:W6(V549_D-1) Preds: [GAGCACTCTGAACCCTGTGAGGCA:W6(V525_D-1) CAGCACTCTGAACCCTGTGAGGCA:W2(V813_D-1) ] Succ: [AGCCACAGGT...CTTCCTGTGA:W5(V717_D-1) ]
AGCCACAGGT...CTTCCTGTGA:W5(V717_D-1) Preds: [GCTAGGGGAA...GGGAGCCACC:W1(V786_D-1) AGTCCACCAC...GGGAGCCACC:W6(V549_D-1) ] Succ: []
GCTAGGGGAA...GGGAGCCACC:W1(V786_D-1) Preds: [] Succ: [AGCCACAGGT...CTTCCTGTGA:W5(V717_D-1) ]
CAGCACTCTGAACCCTGTGAGGCA:W2(V813_D-1) Preds: [GTGTCTTAAC...GAAGCTCCCT:W6(V451_D-1) ] Succ: [AGTCCACCAC...GGGAGCCACC:W6(V549_D-1) ]
GCTCATCAGCAAGAAGAAATCTTT:W2(V885_D-1) Preds: [GGCCACACGA...CTTCCTCAAG:W2(V380_D-1) ] Succ: [CTTTCCAAGTA:W8(V440_D-1) ]
AGAATACAAA...TTTCCAAGTA:W1(V945_D-1) Preds: [] Succ: [GTGTCTTAAC...GAAGCTCCCT:W6(V451_D-1) ]
SNP_collapse candidates: GAGCACTCTGAACCCTGTGAGGCA:W6(V525_D2) len: 24 and CAGCACTCTGAACCCTGTGAGGCA:W2(V813_D2) len: 24
SNP_collapse: merging the node 813 to the node 525
SNP_collapse candidates: CCTCATCAGCAAGAAGAAATCTTT:W7(V416_D1) len: 24 and GCTCATCAGCAAGAAGAAATCTTT:W2(V885_D1) len: 24
SNP_collapse: merging the node 885 to the node 416
removing the single nt variation vertex 813
removing the single nt variation vertex 525
removing the single nt variation vertex 885
removing the single nt variation vertex 416
SECTION
====================
Removing small components.
====================


ComponentDivision: 0 contains the following vertices:
node_id: 945
node_id: 786
node_id: 451
node_id: 981
node_id: 549
node_id: 982
node_id: 440
node_id: 380
node_id: 717
SubComp: 945 has 9 nodes; total coverage: 2212 average: 4.3118906
number of good components: 1
adding to 380: Location of original node 380 in index 0
adding to 381: Location of original node 380 in index 1
adding to 382: Location of original node 380 in index 2
adding to 383: Location of original node 380 in index 3
adding to 384: Location of original node 380 in index 4
adding to 385: Location of original node 380 in index 5
adding to 386: Location of original node 380 in index 6
adding to 387: Location of original node 380 in index 7
adding to 388: Location of original node 380 in index 8
adding to 389: Location of original node 380 in index 9
adding to 390: Location of original node 380 in index 10
adding to 391: Location of original node 380 in index 11
adding to 392: Location of original node 380 in index 12
adding to 393: Location of original node 380 in index 13
adding to 394: Location of original node 380 in index 14
adding to 395: Location of original node 380 in index 15
adding to 396: Location of original node 380 in index 16
adding to 397: Location of original node 380 in index 17
adding to 398: Location of original node 380 in index 18
adding to 399: Location of original node 380 in index 19
adding to 400: Location of original node 380 in index 20
adding to 401: Location of original node 380 in index 21
adding to 402: Location of original node 380 in index 22
adding to 403: Location of original node 380 in index 23
adding to 404: Location of original node 380 in index 24
adding to 405: Location of original node 380 in index 25
adding to 406: Location of original node 380 in index 26
adding to 407: Location of original node 380 in index 27
adding to 408: Location of original node 380 in index 28
adding to 409: Location of original node 380 in index 29
adding to 410: Location of original node 380 in index 30
adding to 411: Location of original node 380 in index 31
adding to 412: Location of original node 380 in index 32
adding to 413: Location of original node 380 in index 33
adding to 414: Location of original node 380 in index 34
adding to 415: Location of original node 380 in index 35
adding to 440: Location of original node 440 in index 0
adding to 441: Location of original node 440 in index 1
adding to 442: Location of original node 440 in index 2
adding to 443: Location of original node 440 in index 3
adding to 444: Location of original node 440 in index 4
adding to 445: Location of original node 440 in index 5
adding to 446: Location of original node 440 in index 6
adding to 447: Location of original node 440 in index 7
adding to 448: Location of original node 440 in index 8
adding to 449: Location of original node 440 in index 9
adding to 450: Location of original node 440 in index 10
adding to 451: Location of original node 451 in index 0
adding to 452: Location of original node 451 in index 1
adding to 453: Location of original node 451 in index 2
adding to 454: Location of original node 451 in index 3
adding to 455: Location of original node 451 in index 4
adding to 456: Location of original node 451 in index 5
adding to 457: Location of original node 451 in index 6
adding to 458: Location of original node 451 in index 7
adding to 459: Location of original node 451 in index 8
adding to 460: Location of original node 451 in index 9
adding to 461: Location of original node 451 in index 10
adding to 462: Location of original node 451 in index 11
adding to 463: Location of original node 451 in index 12
adding to 464: Location of original node 451 in index 13
adding to 465: Location of original node 451 in index 14
adding to 466: Location of original node 451 in index 15
adding to 467: Location of original node 451 in index 16
adding to 468: Location of original node 451 in index 17
adding to 469: Location of original node 451 in index 18
adding to 470: Location of original node 451 in index 19
adding to 471: Location of original node 451 in index 20
adding to 472: Location of original node 451 in index 21
adding to 473: Location of original node 451 in index 22
adding to 474: Location of original node 451 in index 23
adding to 475: Location of original node 451 in index 24
adding to 476: Location of original node 451 in index 25
adding to 477: Location of original node 451 in index 26
adding to 478: Location of original node 451 in index 27
adding to 479: Location of original node 451 in index 28
adding to 480: Location of original node 451 in index 29
adding to 481: Location of original node 451 in index 30
adding to 482: Location of original node 451 in index 31
adding to 483: Location of original node 451 in index 32
adding to 484: Location of original node 451 in index 33
adding to 485: Location of original node 451 in index 34
adding to 486: Location of original node 451 in index 35
adding to 487: Location of original node 451 in index 36
adding to 488: Location of original node 451 in index 37
adding to 489: Location of original node 451 in index 38
adding to 490: Location of original node 451 in index 39
adding to 491: Location of original node 451 in index 40
adding to 492: Location of original node 451 in index 41
adding to 493: Location of original node 451 in index 42
adding to 494: Location of original node 451 in index 43
adding to 495: Location of original node 451 in index 44
adding to 496: Location of original node 451 in index 45
adding to 497: Location of original node 451 in index 46
adding to 498: Location of original node 451 in index 47
adding to 499: Location of original node 451 in index 48
adding to 500: Location of original node 451 in index 49
adding to 501: Location of original node 451 in index 50
adding to 502: Location of original node 451 in index 51
adding to 503: Location of original node 451 in index 52
adding to 504: Location of original node 451 in index 53
adding to 505: Location of original node 451 in index 54
adding to 506: Location of original node 451 in index 55
adding to 507: Location of original node 451 in index 56
adding to 508: Location of original node 451 in index 57
adding to 509: Location of original node 451 in index 58
adding to 510: Location of original node 451 in index 59
adding to 511: Location of original node 451 in index 60
adding to 512: Location of original node 451 in index 61
adding to 513: Location of original node 451 in index 62
adding to 514: Location of original node 451 in index 63
adding to 515: Location of original node 451 in index 64
adding to 516: Location of original node 451 in index 65
adding to 517: Location of original node 451 in index 66
adding to 518: Location of original node 451 in index 67
adding to 519: Location of original node 451 in index 68
adding to 520: Location of original node 451 in index 69
adding to 521: Location of original node 451 in index 70
adding to 522: Location of original node 451 in index 71
adding to 523: Location of original node 451 in index 72
adding to 524: Location of original node 451 in index 73
adding to 549: Location of original node 549 in index 0
adding to 550: Location of original node 549 in index 1
adding to 551: Location of original node 549 in index 2
adding to 552: Location of original node 549 in index 3
adding to 553: Location of original node 549 in index 4
adding to 554: Location of original node 549 in index 5
adding to 555: Location of original node 549 in index 6
adding to 556: Location of original node 549 in index 7
adding to 557: Location of original node 549 in index 8
adding to 558: Location of original node 549 in index 9
adding to 559: Location of original node 549 in index 10
adding to 560: Location of original node 549 in index 11
adding to 561: Location of original node 549 in index 12
adding to 562: Location of original node 549 in index 13
adding to 563: Location of original node 549 in index 14
adding to 564: Location of original node 549 in index 15
adding to 565: Location of original node 549 in index 16
adding to 566: Location of original node 549 in index 17
adding to 567: Location of original node 549 in index 18
adding to 568: Location of original node 549 in index 19
adding to 569: Location of original node 549 in index 20
adding to 570: Location of original node 549 in index 21
adding to 571: Location of original node 549 in index 22
adding to 572: Location of original node 549 in index 23
adding to 573: Location of original node 549 in index 24
adding to 574: Location of original node 549 in index 25
adding to 575: Location of original node 549 in index 26
adding to 576: Location of original node 549 in index 27
adding to 577: Location of original node 549 in index 28
adding to 578: Location of original node 549 in index 29
adding to 579: Location of original node 549 in index 30
adding to 580: Location of original node 549 in index 31
adding to 581: Location of original node 549 in index 32
adding to 582: Location of original node 549 in index 33
adding to 583: Location of original node 549 in index 34
adding to 584: Location of original node 549 in index 35
adding to 585: Location of original node 549 in index 36
adding to 586: Location of original node 549 in index 37
adding to 587: Location of original node 549 in index 38
adding to 588: Location of original node 549 in index 39
adding to 589: Location of original node 549 in index 40
adding to 590: Location of original node 549 in index 41
adding to 591: Location of original node 549 in index 42
adding to 592: Location of original node 549 in index 43
adding to 593: Location of original node 549 in index 44
adding to 594: Location of original node 549 in index 45
adding to 595: Location of original node 549 in index 46
adding to 596: Location of original node 549 in index 47
adding to 597: Location of original node 549 in index 48
adding to 598: Location of original node 549 in index 49
adding to 599: Location of original node 549 in index 50
adding to 600: Location of original node 549 in index 51
adding to 601: Location of original node 549 in index 52
adding to 602: Location of original node 549 in index 53
adding to 603: Location of original node 549 in index 54
adding to 604: Location of original node 549 in index 55
adding to 605: Location of original node 549 in index 56
adding to 606: Location of original node 549 in index 57
adding to 607: Location of original node 549 in index 58
adding to 608: Location of original node 549 in index 59
adding to 609: Location of original node 549 in index 60
adding to 610: Location of original node 549 in index 61
adding to 611: Location of original node 549 in index 62
adding to 612: Location of original node 549 in index 63
adding to 613: Location of original node 549 in index 64
adding to 614: Location of original node 549 in index 65
adding to 615: Location of original node 549 in index 66
adding to 616: Location of original node 549 in index 67
adding to 617: Location of original node 549 in index 68
adding to 618: Location of original node 549 in index 69
adding to 619: Location of original node 549 in index 70
adding to 620: Location of original node 549 in index 71
adding to 621: Location of original node 549 in index 72
adding to 622: Location of original node 549 in index 73
adding to 623: Location of original node 549 in index 74
adding to 624: Location of original node 549 in index 75
adding to 625: Location of original node 549 in index 76
adding to 626: Location of original node 549 in index 77
adding to 627: Location of original node 549 in index 78
adding to 628: Location of original node 549 in index 79
adding to 629: Location of original node 549 in index 80
adding to 630: Location of original node 549 in index 81
adding to 631: Location of original node 549 in index 82
adding to 632: Location of original node 549 in index 83
adding to 633: Location of original node 549 in index 84
adding to 634: Location of original node 549 in index 85
adding to 635: Location of original node 549 in index 86
adding to 636: Location of original node 549 in index 87
adding to 637: Location of original node 549 in index 88
adding to 638: Location of original node 549 in index 89
adding to 639: Location of original node 549 in index 90
adding to 640: Location of original node 549 in index 91
adding to 641: Location of original node 549 in index 92
adding to 642: Location of original node 549 in index 93
adding to 643: Location of original node 549 in index 94
adding to 644: Location of original node 549 in index 95
adding to 645: Location of original node 549 in index 96
adding to 646: Location of original node 549 in index 97
adding to 647: Location of original node 549 in index 98
adding to 648: Location of original node 549 in index 99
adding to 649: Location of original node 549 in index 100
adding to 650: Location of original node 549 in index 101
adding to 651: Location of original node 549 in index 102
adding to 652: Location of original node 549 in index 103
adding to 653: Location of original node 549 in index 104
adding to 654: Location of original node 549 in index 105
adding to 655: Location of original node 549 in index 106
adding to 656: Location of original node 549 in index 107
adding to 657: Location of original node 549 in index 108
adding to 658: Location of original node 549 in index 109
adding to 659: Location of original node 549 in index 110
adding to 660: Location of original node 549 in index 111
adding to 661: Location of original node 549 in index 112
adding to 662: Location of original node 549 in index 113
adding to 663: Location of original node 549 in index 114
adding to 664: Location of original node 549 in index 115
adding to 665: Location of original node 549 in index 116
adding to 666: Location of original node 549 in index 117
adding to 667: Location of original node 549 in index 118
adding to 668: Location of original node 549 in index 119
adding to 669: Location of original node 549 in index 120
adding to 670: Location of original node 549 in index 121
adding to 671: Location of original node 549 in index 122
adding to 672: Location of original node 549 in index 123
adding to 673: Location of original node 549 in index 124
adding to 674: Location of original node 549 in index 125
adding to 675: Location of original node 549 in index 126
adding to 676: Location of original node 549 in index 127
adding to 677: Location of original node 549 in index 128
adding to 678: Location of original node 549 in index 129
adding to 679: Location of original node 549 in index 130
adding to 680: Location of original node 549 in index 131
adding to 681: Location of original node 549 in index 132
adding to 682: Location of original node 549 in index 133
adding to 683: Location of original node 549 in index 134
adding to 684: Location of original node 549 in index 135
adding to 685: Location of original node 549 in index 136
adding to 686: Location of original node 549 in index 137
adding to 687: Location of original node 549 in index 138
adding to 688: Location of original node 549 in index 139
adding to 689: Location of original node 549 in index 140
adding to 690: Location of original node 549 in index 141
adding to 691: Location of original node 549 in index 142
adding to 692: Location of original node 549 in index 143
adding to 693: Location of original node 549 in index 144
adding to 694: Location of original node 549 in index 145
adding to 695: Location of original node 549 in index 146
adding to 696: Location of original node 549 in index 147
adding to 697: Location of original node 549 in index 148
adding to 698: Location of original node 549 in index 149
adding to 699: Location of original node 549 in index 150
adding to 700: Location of original node 549 in index 151
adding to 701: Location of original node 549 in index 152
adding to 702: Location of original node 549 in index 153
adding to 703: Location of original node 549 in index 154
adding to 704: Location of original node 549 in index 155
adding to 705: Location of original node 549 in index 156
adding to 706: Location of original node 549 in index 157
adding to 707: Location of original node 549 in index 158
adding to 708: Location of original node 549 in index 159
adding to 709: Location of original node 549 in index 160
adding to 710: Location of original node 549 in index 161
adding to 711: Location of original node 549 in index 162
adding to 712: Location of original node 549 in index 163
adding to 713: Location of original node 549 in index 164
adding to 714: Location of original node 549 in index 165
adding to 715: Location of original node 549 in index 166
adding to 716: Location of original node 549 in index 167
adding to 717: Location of original node 717 in index 0
adding to 718: Location of original node 717 in index 1
adding to 719: Location of original node 717 in index 2
adding to 720: Location of original node 717 in index 3
adding to 721: Location of original node 717 in index 4
adding to 722: Location of original node 717 in index 5
adding to 723: Location of original node 717 in index 6
adding to 724: Location of original node 717 in index 7
adding to 725: Location of original node 717 in index 8
adding to 726: Location of original node 717 in index 9
adding to 727: Location of original node 717 in index 10
adding to 728: Location of original node 717 in index 11
adding to 729: Location of original node 717 in index 12
adding to 730: Location of original node 717 in index 13
adding to 731: Location of original node 717 in index 14
adding to 732: Location of original node 717 in index 15
adding to 733: Location of original node 717 in index 16
adding to 734: Location of original node 717 in index 17
adding to 735: Location of original node 717 in index 18
adding to 736: Location of original node 717 in index 19
adding to 737: Location of original node 717 in index 20
adding to 738: Location of original node 717 in index 21
adding to 739: Location of original node 717 in index 22
adding to 740: Location of original node 717 in index 23
adding to 741: Location of original node 717 in index 24
adding to 742: Location of original node 717 in index 25
adding to 743: Location of original node 717 in index 26
adding to 744: Location of original node 717 in index 27
adding to 745: Location of original node 717 in index 28
adding to 746: Location of original node 717 in index 29
adding to 747: Location of original node 717 in index 30
adding to 748: Location of original node 717 in index 31
adding to 749: Location of original node 717 in index 32
adding to 750: Location of original node 717 in index 33
adding to 751: Location of original node 717 in index 34
adding to 752: Location of original node 717 in index 35
adding to 753: Location of original node 717 in index 36
adding to 754: Location of original node 717 in index 37
adding to 755: Location of original node 717 in index 38
adding to 756: Location of original node 717 in index 39
adding to 757: Location of original node 717 in index 40
adding to 758: Location of original node 717 in index 41
adding to 786: Location of original node 786 in index 0
adding to 787: Location of original node 786 in index 1
adding to 788: Location of original node 786 in index 2
adding to 789: Location of original node 786 in index 3
adding to 790: Location of original node 786 in index 4
adding to 791: Location of original node 786 in index 5
adding to 792: Location of original node 786 in index 6
adding to 793: Location of original node 786 in index 7
adding to 794: Location of original node 786 in index 8
adding to 795: Location of original node 786 in index 9
adding to 796: Location of original node 786 in index 10
adding to 797: Location of original node 786 in index 11
adding to 798: Location of original node 786 in index 12
adding to 799: Location of original node 786 in index 13
adding to 800: Location of original node 786 in index 14
adding to 801: Location of original node 786 in index 15
adding to 802: Location of original node 786 in index 16
adding to 803: Location of original node 786 in index 17
adding to 804: Location of original node 786 in index 18
adding to 805: Location of original node 786 in index 19
adding to 806: Location of original node 786 in index 20
adding to 807: Location of original node 786 in index 21
adding to 808: Location of original node 786 in index 22
adding to 809: Location of original node 786 in index 23
adding to 810: Location of original node 786 in index 24
adding to 811: Location of original node 786 in index 25
adding to 812: Location of original node 786 in index 26
adding to 945: Location of original node 945 in index 0
adding to 946: Location of original node 945 in index 1
adding to 947: Location of original node 945 in index 2
adding to 948: Location of original node 945 in index 3
adding to 949: Location of original node 945 in index 4
adding to 950: Location of original node 945 in index 5
adding to 951: Location of original node 945 in index 6
adding to 952: Location of original node 945 in index 7
adding to 953: Location of original node 945 in index 8
adding to 954: Location of original node 945 in index 9
adding to 955: Location of original node 945 in index 10
adding to 956: Location of original node 945 in index 11
adding to 957: Location of original node 945 in index 12
adding to 958: Location of original node 945 in index 13
adding to 959: Location of original node 945 in index 14
adding to 960: Location of original node 945 in index 15
adding to 961: Location of original node 945 in index 16
adding to 962: Location of original node 945 in index 17
adding to 963: Location of original node 945 in index 18
adding to 964: Location of original node 945 in index 19
adding to 965: Location of original node 945 in index 20
adding to 966: Location of original node 945 in index 21
adding to 967: Location of original node 945 in index 22
adding to 968: Location of original node 945 in index 23
adding to 969: Location of original node 945 in index 24
adding to 970: Location of original node 945 in index 25
adding to 971: Location of original node 945 in index 26
adding to 972: Location of original node 945 in index 27
adding to 973: Location of original node 945 in index 28
adding to 974: Location of original node 945 in index 29
adding to 975: Location of original node 945 in index 30
adding to 976: Location of original node 945 in index 31
adding to 977: Location of original node 945 in index 32
adding to 978: Location of original node 945 in index 33
adding to 979: Location of original node 945 in index 34
adding to 980: Location of original node 945 in index 35
adding to 526: Location of original node 981 in index 0
adding to 527: Location of original node 981 in index 1
adding to 528: Location of original node 981 in index 2
adding to 529: Location of original node 981 in index 3
adding to 530: Location of original node 981 in index 4
adding to 531: Location of original node 981 in index 5
adding to 532: Location of original node 981 in index 6
adding to 533: Location of original node 981 in index 7
adding to 534: Location of original node 981 in index 8
adding to 535: Location of original node 981 in index 9
adding to 536: Location of original node 981 in index 10
adding to 537: Location of original node 981 in index 11
adding to 538: Location of original node 981 in index 12
adding to 539: Location of original node 981 in index 13
adding to 540: Location of original node 981 in index 14
adding to 541: Location of original node 981 in index 15
adding to 542: Location of original node 981 in index 16
adding to 543: Location of original node 981 in index 17
adding to 544: Location of original node 981 in index 18
adding to 545: Location of original node 981 in index 19
adding to 546: Location of original node 981 in index 20
adding to 547: Location of original node 981 in index 21
adding to 548: Location of original node 981 in index 22
adding to 417: Location of original node 982 in index 0
adding to 418: Location of original node 982 in index 1
adding to 419: Location of original node 982 in index 2
adding to 420: Location of original node 982 in index 3
adding to 421: Location of original node 982 in index 4
adding to 422: Location of original node 982 in index 5
adding to 423: Location of original node 982 in index 6
adding to 424: Location of original node 982 in index 7
adding to 425: Location of original node 982 in index 8
adding to 426: Location of original node 982 in index 9
adding to 427: Location of original node 982 in index 10
adding to 428: Location of original node 982 in index 11
adding to 429: Location of original node 982 in index 12
adding to 430: Location of original node 982 in index 13
adding to 431: Location of original node 982 in index 14
adding to 432: Location of original node 982 in index 15
adding to 433: Location of original node 982 in index 16
adding to 434: Location of original node 982 in index 17
adding to 435: Location of original node 982 in index 18
adding to 436: Location of original node 982 in index 19
adding to 437: Location of original node 982 in index 20
adding to 438: Location of original node 982 in index 21
adding to 439: Location of original node 982 in index 22

SECTION
=================
Node descriptions before threading.
===================

NODE_DESCR: GGCCACACGA...CTTCCTCAAG:W2(V380_D0) Preds: [] Succ: [CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1) ]
NODE_DESCR: CTTTCCAAGTA:W8(V440_D2) Preds: [CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1) ] Succ: [GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1) ]
NODE_DESCR: GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1) Preds: [AGAATACAAA...TTTCCAAGTA:W1(V945_D0) CTTTCCAAGTA:W8(V440_D2) ] Succ: [GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1) ]
NODE_DESCR: AGTCCACCAC...GGGAGCCACC:W6(V549_D3) Preds: [GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1) ] Succ: [AGCCACAGGT...CTTCCTGTGA:W5(V717_D1) ]
NODE_DESCR: AGCCACAGGT...CTTCCTGTGA:W5(V717_D1) Preds: [GCTAGGGGAA...GGGAGCCACC:W1(V786_D0) AGTCCACCAC...GGGAGCCACC:W6(V549_D3) ] Succ: []
NODE_DESCR: GCTAGGGGAA...GGGAGCCACC:W1(V786_D0) Preds: [] Succ: [AGCCACAGGT...CTTCCTGTGA:W5(V717_D1) ]
NODE_DESCR: AGAATACAAA...TTTCCAAGTA:W1(V945_D0) Preds: [] Succ: [GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1) ]
NODE_DESCR: GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1) Preds: [GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1) ] Succ: [AGTCCACCAC...GGGAGCCACC:W6(V549_D3) ]
NODE_DESCR: CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1) Preds: [GGCCACACGA...CTTCCTCAAG:W2(V380_D0) ] Succ: [CTTTCCAAGTA:W8(V440_D2) ]

SECTION
====================
Threading reads through the graph
=========================


mapped read [1]Read: >61DFRAAXX100204:1:112:16960:13532/1	0	654	51	705		AGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGA	-
Read: 61DFRAAXX100204:1:112:16960:13532 has start: 0, end: 75 and sequence: AGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGA
after extracting substring: AGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGA
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 105


Threading read: 61DFRAAXX100204:1:112:16960:13532, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:1:112:16960:13532 sequence is:
AGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGA
updatePathRecursively(readName=61DFRAAXX100204:1:112:16960:13532, locInSeq: 0 / 75, locInNode: 105 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (61DFRAAXX100204:1:112:16960:13532)
AGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGA 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
AGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGA 105
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 181 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:1:112:16960:13532 with length: 76 and base [76] ends at position  [181] within node: 549 totaling 0 mismatches. 
FINAL BEST PATH for 61DFRAAXX100204:1:112:16960:13532 is [549] with total mm: 0
Read 61DFRAAXX100204:1:112:16960:13532 seq AGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGA threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549] positions:  [549,nodeEnd:181,readEnd:76] , trimmed to: [549]
Threaded Read as: 61DFRAAXX100204:1:112:16960:13532 : [549]
ReadPath@Init: 61DFRAAXX100204:1:112:16960:13532 : [549]

mapped read [2]Read: >61DFRAAXX100204:1:113:7690:4285/2	0	538	51	589		GAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAG	-
Read: 61DFRAAXX100204:1:113:7690:4285 has start: 0, end: 75 and sequence: GAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAG
after extracting substring: GAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAG
findPathInGraph: V:981, with seq: GGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCA
trying to start the mapping to node 981 at position: 12


Threading read: 61DFRAAXX100204:1:113:7690:4285, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:1:113:7690:4285 sequence is:
GAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAG
updatePathRecursively(readName=61DFRAAXX100204:1:113:7690:4285, locInSeq: 0 / 75, locInNode: 12 / 46, totalNumMm: 0

trying to continue the mapping to node GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)
-ALIGNING READ SEQ (61DFRAAXX100204:1:113:7690:4285)
GAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAA 0
To VERTEX (GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)) SEQ:
GGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCA 12
shortcircuiting the zipper test, too many MM or execeeding local seq divergence
  *Trying again using full DP alignment:
-running Needleman-Wunsch alignment of vertex to read
Read               1 -GAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCG     49
                      ||||||||||||||||||||||||||||||||||               
Vertex             1 GGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCA---------------     35


vertex end gaps: 15
read end gaps: 0
mismatches encountered: 1
alignment divergence up to seq pos 34 = mm: 1, div:0.029411765
local vertex alignment divergence = 1 / 47 = 0.021276595
Reached end of node sequence.  Read61DFRAAXX100204:1:113:7690:4285 base [34] ends at position  [47] within node: 981 totaling 1 mismatches. 
-reached end of vertex: 981, exploring next vertices for continued path extension: [549]
Pursuing extension from : GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1) to successors: [AGTCCACCAC...GGGAGCCACC:W6(V549_D3)]
Exploring extension from node: 981 to node: 549
updatePathRecursively(readName=61DFRAAXX100204:1:113:7690:4285, locInSeq: 34 / 75, locInNode: 23 / 190, totalNumMm: 1

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (61DFRAAXX100204:1:113:7690:4285)
AGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAG 34
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
AGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAG 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 1, div:0.013157895
local vertex alignment divergence = 0 / 65 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:1:113:7690:4285 with length: 76 and base [76] ends at position  [65] within node: 549 totaling 0 mismatches. 
61DFRAAXX100204:1:113:7690:4285 best path so far from vertex: 981 to : 549 = [549], with total mm: 0
Done with exploring paths from vertex: 981
Paths and scores found are: 
	explored path: [549] w/ mm: 0
	AND best selected was: [549] w/ mm: 0
FINAL BEST PATH for 61DFRAAXX100204:1:113:7690:4285 is [981, 549] with total mm: 1
Read 61DFRAAXX100204:1:113:7690:4285 seq GAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAG threaded as: PATH_N_MM_COUNT: mismatches=1, path= [981, 549] positions:  [981,nodeEnd:47,readEnd:34] [549,nodeEnd:65,readEnd:76] , trimmed to: [981, 549]
Threaded Read as: 61DFRAAXX100204:1:113:7690:4285 : [981, 549]
ReadPath@Init: 61DFRAAXX100204:1:113:7690:4285 : [981, 549]

mapped read [3]Read: >61DFRAAXX100204:1:115:8211:5116/2	0	473	51	524		AGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTG	-
Read: 61DFRAAXX100204:1:115:8211:5116 has start: 0, end: 75 and sequence: AGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTG
after extracting substring: AGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTG
findPathInGraph: V:451, with seq: GAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT
trying to start the mapping to node 451 at position: 22


Threading read: 61DFRAAXX100204:1:115:8211:5116, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:1:115:8211:5116 sequence is:
AGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTG
updatePathRecursively(readName=61DFRAAXX100204:1:115:8211:5116, locInSeq: 0 / 75, locInNode: 22 / 96, totalNumMm: 0

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (61DFRAAXX100204:1:115:8211:5116)
AGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 0
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
AGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 22
zipper alignment mm: 0
alignment divergence up to seq pos 75 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 97 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:1:115:8211:5116 base [75] ends at position  [97] within node: 451 totaling 0 mismatches. 
-reached end of vertex: 451, exploring next vertices for continued path extension: [981]
Pursuing extension from : GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1) to successors: [GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)]
Exploring extension from node: 451 to node: 981
updatePathRecursively(readName=61DFRAAXX100204:1:115:8211:5116, locInSeq: 75 / 75, locInNode: 23 / 46, totalNumMm: 0

trying to continue the mapping to node GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)
-ALIGNING READ SEQ (61DFRAAXX100204:1:115:8211:5116)
G 75
To VERTEX (GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)) SEQ:
G 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 24 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:1:115:8211:5116 with length: 76 and base [76] ends at position  [24] within node: 981 totaling 0 mismatches. 
61DFRAAXX100204:1:115:8211:5116 best path so far from vertex: 451 to : 981 = [981], with total mm: 0
Done with exploring paths from vertex: 451
Paths and scores found are: 
	explored path: [981] w/ mm: 0
	AND best selected was: [981] w/ mm: 0
FINAL BEST PATH for 61DFRAAXX100204:1:115:8211:5116 is [451, 981] with total mm: 0
Read 61DFRAAXX100204:1:115:8211:5116 seq AGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTG threaded as: PATH_N_MM_COUNT: mismatches=0, path= [451, 981] positions:  [451,nodeEnd:97,readEnd:75] [981,nodeEnd:24,readEnd:76] , trimmed to: [451, 981]
Threaded Read as: 61DFRAAXX100204:1:115:8211:5116 : [451, 981]
ReadPath@Init: 61DFRAAXX100204:1:115:8211:5116 : [451, 981]

mapped read [4]Read: >61DFRAAXX100204:1:20:5538:6890/2	0	567	51	618		AGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCT	-
Read: 61DFRAAXX100204:1:20:5538:6890 has start: 0, end: 75 and sequence: AGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCT
after extracting substring: AGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCT
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 18


Threading read: 61DFRAAXX100204:1:20:5538:6890, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:1:20:5538:6890 sequence is:
AGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCT
updatePathRecursively(readName=61DFRAAXX100204:1:20:5538:6890, locInSeq: 0 / 75, locInNode: 18 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (61DFRAAXX100204:1:20:5538:6890)
AGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCT 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
AGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCT 18
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 94 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:1:20:5538:6890 with length: 76 and base [76] ends at position  [94] within node: 549 totaling 0 mismatches. 
FINAL BEST PATH for 61DFRAAXX100204:1:20:5538:6890 is [549] with total mm: 0
Read 61DFRAAXX100204:1:20:5538:6890 seq AGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCT threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549] positions:  [549,nodeEnd:94,readEnd:76] , trimmed to: [549]
Threaded Read as: 61DFRAAXX100204:1:20:5538:6890 : [549]
ReadPath@Init: 61DFRAAXX100204:1:20:5538:6890 : [549]

mapped read [5]Read: >61DFRAAXX100204:1:39:8793:18196/1	0	380	51	431		GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGA	-
Read: 61DFRAAXX100204:1:39:8793:18196 has start: 0, end: 75 and sequence: GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGA
after extracting substring: GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGA
findPathInGraph: V:380, with seq: GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAG
trying to start the mapping to node 380 at position: 0


Threading read: 61DFRAAXX100204:1:39:8793:18196, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:1:39:8793:18196 sequence is:
GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGA
updatePathRecursively(readName=61DFRAAXX100204:1:39:8793:18196, locInSeq: 0 / 75, locInNode: 0 / 58, totalNumMm: 0

trying to continue the mapping to node GGCCACACGA...CTTCCTCAAG:W2(V380_D0)
-ALIGNING READ SEQ (61DFRAAXX100204:1:39:8793:18196)
GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAG 0
To VERTEX (GGCCACACGA...CTTCCTCAAG:W2(V380_D0)) SEQ:
GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAG 0
zipper alignment mm: 0
alignment divergence up to seq pos 59 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 59 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:1:39:8793:18196 base [59] ends at position  [59] within node: 380 totaling 0 mismatches. 
-reached end of vertex: 380, exploring next vertices for continued path extension: [982]
Pursuing extension from : GGCCACACGA...CTTCCTCAAG:W2(V380_D0) to successors: [CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)]
Exploring extension from node: 380 to node: 982
updatePathRecursively(readName=61DFRAAXX100204:1:39:8793:18196, locInSeq: 59 / 75, locInNode: 23 / 46, totalNumMm: 0

trying to continue the mapping to node CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)
-ALIGNING READ SEQ (61DFRAAXX100204:1:39:8793:18196)
CCTCATCAGCAAGAAGA 59
To VERTEX (CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)) SEQ:
CCTCATCAGCAAGAAGA 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 40 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:1:39:8793:18196 with length: 76 and base [76] ends at position  [40] within node: 982 totaling 0 mismatches. 
61DFRAAXX100204:1:39:8793:18196 best path so far from vertex: 380 to : 982 = [982], with total mm: 0
Done with exploring paths from vertex: 380
Paths and scores found are: 
	explored path: [982] w/ mm: 0
	AND best selected was: [982] w/ mm: 0
FINAL BEST PATH for 61DFRAAXX100204:1:39:8793:18196 is [380, 982] with total mm: 0
Read 61DFRAAXX100204:1:39:8793:18196 seq GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGA threaded as: PATH_N_MM_COUNT: mismatches=0, path= [380, 982] positions:  [380,nodeEnd:59,readEnd:59] [982,nodeEnd:40,readEnd:76] , trimmed to: [380, 982]
Threaded Read as: 61DFRAAXX100204:1:39:8793:18196 : [380, 982]
ReadPath@Init: 61DFRAAXX100204:1:39:8793:18196 : [380, 982]

mapped read [6]Read: >61DFRAAXX100204:1:39:8793:18196/2	0	502	51	553		GAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTCAGCACTCTGAACCCTGTGAGGCAAGTCCA	-
Read: 61DFRAAXX100204:1:39:8793:18196 has start: 0, end: 75 and sequence: GAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTCAGCACTCTGAACCCTGTGAGGCAAGTCCA
after extracting substring: GAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTCAGCACTCTGAACCCTGTGAGGCAAGTCCA
findPathInGraph: V:451, with seq: GAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT
trying to start the mapping to node 451 at position: 51


Threading read: 61DFRAAXX100204:1:39:8793:18196, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:1:39:8793:18196 sequence is:
GAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTCAGCACTCTGAACCCTGTGAGGCAAGTCCA
updatePathRecursively(readName=61DFRAAXX100204:1:39:8793:18196, locInSeq: 0 / 75, locInNode: 51 / 96, totalNumMm: 0

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (61DFRAAXX100204:1:39:8793:18196)
GAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 0
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
GAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 51
zipper alignment mm: 0
alignment divergence up to seq pos 46 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 97 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:1:39:8793:18196 base [46] ends at position  [97] within node: 451 totaling 0 mismatches. 
-reached end of vertex: 451, exploring next vertices for continued path extension: [981]
Pursuing extension from : GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1) to successors: [GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)]
Exploring extension from node: 451 to node: 981
updatePathRecursively(readName=61DFRAAXX100204:1:39:8793:18196, locInSeq: 46 / 75, locInNode: 23 / 46, totalNumMm: 0

trying to continue the mapping to node GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)
-ALIGNING READ SEQ (61DFRAAXX100204:1:39:8793:18196)
CAGCACTCTGAACCCTGTGAGGCA 46
To VERTEX (GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)) SEQ:
GAGCACTCTGAACCCTGTGAGGCA 23
zipper alignment mm: 1
alignment divergence up to seq pos 70 = mm: 1, div:0.014285714
local vertex alignment divergence = 1 / 47 = 0.021276595
Reached end of node sequence.  Read61DFRAAXX100204:1:39:8793:18196 base [70] ends at position  [47] within node: 981 totaling 1 mismatches. 
-reached end of vertex: 981, exploring next vertices for continued path extension: [549]
Pursuing extension from : GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1) to successors: [AGTCCACCAC...GGGAGCCACC:W6(V549_D3)]
Exploring extension from node: 981 to node: 549
updatePathRecursively(readName=61DFRAAXX100204:1:39:8793:18196, locInSeq: 70 / 75, locInNode: 23 / 190, totalNumMm: 1

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (61DFRAAXX100204:1:39:8793:18196)
AGTCCA 70
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
AGTCCA 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 1, div:0.013157895
local vertex alignment divergence = 0 / 29 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:1:39:8793:18196 with length: 76 and base [76] ends at position  [29] within node: 549 totaling 0 mismatches. 
61DFRAAXX100204:1:39:8793:18196 best path so far from vertex: 981 to : 549 = [549], with total mm: 0
Done with exploring paths from vertex: 981
Paths and scores found are: 
	explored path: [549] w/ mm: 0
	AND best selected was: [549] w/ mm: 0
61DFRAAXX100204:1:39:8793:18196 best path so far from vertex: 451 to : 981 = [981, 549], with total mm: 1
Done with exploring paths from vertex: 451
Paths and scores found are: 
	explored path: [981, 549] w/ mm: 1
	AND best selected was: [981, 549] w/ mm: 1
FINAL BEST PATH for 61DFRAAXX100204:1:39:8793:18196 is [451, 981, 549] with total mm: 1
Read 61DFRAAXX100204:1:39:8793:18196 seq GAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTCAGCACTCTGAACCCTGTGAGGCAAGTCCA threaded as: PATH_N_MM_COUNT: mismatches=1, path= [451, 981, 549] positions:  [451,nodeEnd:97,readEnd:46] [981,nodeEnd:47,readEnd:70] [549,nodeEnd:29,readEnd:76] , trimmed to: [451, 981, 549]
Threaded Read as: 61DFRAAXX100204:1:39:8793:18196 : [451, 981, 549]
ReadPath@Init: 61DFRAAXX100204:1:39:8793:18196 : [451, 981, 549]

mapped read [7]Read: >61DFRAAXX100204:1:67:9991:2232/1	0	401	51	452		GTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTG	-
Read: 61DFRAAXX100204:1:67:9991:2232 has start: 0, end: 75 and sequence: GTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTG
after extracting substring: GTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTG
findPathInGraph: V:380, with seq: GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAG
trying to start the mapping to node 380 at position: 21


Threading read: 61DFRAAXX100204:1:67:9991:2232, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:1:67:9991:2232 sequence is:
GTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTG
updatePathRecursively(readName=61DFRAAXX100204:1:67:9991:2232, locInSeq: 0 / 75, locInNode: 21 / 58, totalNumMm: 0

trying to continue the mapping to node GGCCACACGA...CTTCCTCAAG:W2(V380_D0)
-ALIGNING READ SEQ (61DFRAAXX100204:1:67:9991:2232)
GTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAG 0
To VERTEX (GGCCACACGA...CTTCCTCAAG:W2(V380_D0)) SEQ:
GTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAG 21
zipper alignment mm: 0
alignment divergence up to seq pos 38 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 59 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:1:67:9991:2232 base [38] ends at position  [59] within node: 380 totaling 0 mismatches. 
-reached end of vertex: 380, exploring next vertices for continued path extension: [982]
Pursuing extension from : GGCCACACGA...CTTCCTCAAG:W2(V380_D0) to successors: [CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)]
Exploring extension from node: 380 to node: 982
updatePathRecursively(readName=61DFRAAXX100204:1:67:9991:2232, locInSeq: 38 / 75, locInNode: 23 / 46, totalNumMm: 0

trying to continue the mapping to node CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)
-ALIGNING READ SEQ (61DFRAAXX100204:1:67:9991:2232)
CCTCATCAGCAAGAAGAAATCTTT 38
To VERTEX (CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)) SEQ:
CCTCATCAGCAAGAAGAAATCTTT 23
zipper alignment mm: 0
alignment divergence up to seq pos 62 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 47 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:1:67:9991:2232 base [62] ends at position  [47] within node: 982 totaling 0 mismatches. 
-reached end of vertex: 982, exploring next vertices for continued path extension: [440]
Pursuing extension from : CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1) to successors: [CTTTCCAAGTA:W8(V440_D2)]
Exploring extension from node: 982 to node: 440
updatePathRecursively(readName=61DFRAAXX100204:1:67:9991:2232, locInSeq: 62 / 75, locInNode: 23 / 33, totalNumMm: 0

trying to continue the mapping to node CTTTCCAAGTA:W8(V440_D2)
-ALIGNING READ SEQ (61DFRAAXX100204:1:67:9991:2232)
CTTTCCAAGTA 62
To VERTEX (CTTTCCAAGTA:W8(V440_D2)) SEQ:
CTTTCCAAGTA 23
zipper alignment mm: 0
alignment divergence up to seq pos 73 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 34 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:1:67:9991:2232 base [73] ends at position  [34] within node: 440 totaling 0 mismatches. 
-reached end of vertex: 440, exploring next vertices for continued path extension: [451]
Pursuing extension from : CTTTCCAAGTA:W8(V440_D2) to successors: [GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)]
Exploring extension from node: 440 to node: 451
updatePathRecursively(readName=61DFRAAXX100204:1:67:9991:2232, locInSeq: 73 / 75, locInNode: 23 / 96, totalNumMm: 0

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (61DFRAAXX100204:1:67:9991:2232)
GTG 73
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
GTG 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 26 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:1:67:9991:2232 with length: 76 and base [76] ends at position  [26] within node: 451 totaling 0 mismatches. 
61DFRAAXX100204:1:67:9991:2232 best path so far from vertex: 440 to : 451 = [451], with total mm: 0
Done with exploring paths from vertex: 440
Paths and scores found are: 
	explored path: [451] w/ mm: 0
	AND best selected was: [451] w/ mm: 0
61DFRAAXX100204:1:67:9991:2232 best path so far from vertex: 982 to : 440 = [440, 451], with total mm: 0
Done with exploring paths from vertex: 982
Paths and scores found are: 
	explored path: [440, 451] w/ mm: 0
	AND best selected was: [440, 451] w/ mm: 0
61DFRAAXX100204:1:67:9991:2232 best path so far from vertex: 380 to : 982 = [982, 440, 451], with total mm: 0
Done with exploring paths from vertex: 380
Paths and scores found are: 
	explored path: [982, 440, 451] w/ mm: 0
	AND best selected was: [982, 440, 451] w/ mm: 0
FINAL BEST PATH for 61DFRAAXX100204:1:67:9991:2232 is [380, 982, 440, 451] with total mm: 0
Read 61DFRAAXX100204:1:67:9991:2232 seq GTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTG threaded as: PATH_N_MM_COUNT: mismatches=0, path= [380, 982, 440, 451] positions:  [380,nodeEnd:59,readEnd:38] [982,nodeEnd:47,readEnd:62] [440,nodeEnd:34,readEnd:73] [451,nodeEnd:26,readEnd:76] , trimmed to: [380, 982, 440, 451]
Threaded Read as: 61DFRAAXX100204:1:67:9991:2232 : [380, 982, 440, 451]
ReadPath@Init: 61DFRAAXX100204:1:67:9991:2232 : [380, 982, 440, 451]

mapped read [8]Read: >61DFRAAXX100204:1:70:1041:1268/1	18	680	25	687		GTGACAAAGAAAAGAGGTTGACAGACTCTCTAAGGGACATATGGGAGCTAGATAGAAAGCCCCGAGGAGGTAGCCG	-
Read: 61DFRAAXX100204:1:70:1041:1268 has start: 18, end: 49 and sequence: GTGACAAAGAAAAGAGGTTGACAGACTCTCTAAGGGACATATGGGAGCTAGATAGAAAGCCCCGAGGAGGTAGCCG
after extracting substring: TGACAGACTCTCTAAGGGACATATGGGAGCTA
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 131


Threading read: 61DFRAAXX100204:1:70:1041:1268, length: 32, allowing for 2 max mismatches.
Read: 61DFRAAXX100204:1:70:1041:1268 sequence is:
TGACAGACTCTCTAAGGGACATATGGGAGCTA
updatePathRecursively(readName=61DFRAAXX100204:1:70:1041:1268, locInSeq: 0 / 31, locInNode: 131 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (61DFRAAXX100204:1:70:1041:1268)
TGACAGACTCTCTAAGGGACATATGGGAGCTA 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
TGACAGACTCTCTAAGGGACATATGGGAGCTA 131
zipper alignment mm: 0
alignment divergence up to seq pos 32 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 163 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:1:70:1041:1268 with length: 32 and base [32] ends at position  [163] within node: 549 totaling 0 mismatches. 
FINAL BEST PATH for 61DFRAAXX100204:1:70:1041:1268 is [549] with total mm: 0
Read 61DFRAAXX100204:1:70:1041:1268 seq TGACAGACTCTCTAAGGGACATATGGGAGCTA threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549] positions:  [549,nodeEnd:163,readEnd:32] , trimmed to: [549]
Threaded Read as: 61DFRAAXX100204:1:70:1041:1268 : [549]
ReadPath@Init: 61DFRAAXX100204:1:70:1041:1268 : [549]

mapped read [9]Read: >61DFRAAXX100204:1:85:13720:15251/1	0	639	51	690		TGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACAT	-
Read: 61DFRAAXX100204:1:85:13720:15251 has start: 0, end: 75 and sequence: TGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACAT
after extracting substring: TGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACAT
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 90


Threading read: 61DFRAAXX100204:1:85:13720:15251, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:1:85:13720:15251 sequence is:
TGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACAT
updatePathRecursively(readName=61DFRAAXX100204:1:85:13720:15251, locInSeq: 0 / 75, locInNode: 90 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (61DFRAAXX100204:1:85:13720:15251)
TGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACAT 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
TGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACAT 90
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 166 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:1:85:13720:15251 with length: 76 and base [76] ends at position  [166] within node: 549 totaling 0 mismatches. 
FINAL BEST PATH for 61DFRAAXX100204:1:85:13720:15251 is [549] with total mm: 0
Read 61DFRAAXX100204:1:85:13720:15251 seq TGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACAT threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549] positions:  [549,nodeEnd:166,readEnd:76] , trimmed to: [549]
Threaded Read as: 61DFRAAXX100204:1:85:13720:15251 : [549]
ReadPath@Init: 61DFRAAXX100204:1:85:13720:15251 : [549]

mapped read [10]Read: >61DFRAAXX100204:2:13:7749:17373/2	0	413	51	464		ACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGG	-
Read: 61DFRAAXX100204:2:13:7749:17373 has start: 0, end: 75 and sequence: ACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGG
after extracting substring: ACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGG
findPathInGraph: V:380, with seq: GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAG
trying to start the mapping to node 380 at position: 33


Threading read: 61DFRAAXX100204:2:13:7749:17373, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:2:13:7749:17373 sequence is:
ACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGG
updatePathRecursively(readName=61DFRAAXX100204:2:13:7749:17373, locInSeq: 0 / 75, locInNode: 33 / 58, totalNumMm: 0

trying to continue the mapping to node GGCCACACGA...CTTCCTCAAG:W2(V380_D0)
-ALIGNING READ SEQ (61DFRAAXX100204:2:13:7749:17373)
ACTGGCTACAAACAGACTTCCTCAAG 0
To VERTEX (GGCCACACGA...CTTCCTCAAG:W2(V380_D0)) SEQ:
ACTGGCTACAAACAGACTTCCTCAAG 33
zipper alignment mm: 0
alignment divergence up to seq pos 26 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 59 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:2:13:7749:17373 base [26] ends at position  [59] within node: 380 totaling 0 mismatches. 
-reached end of vertex: 380, exploring next vertices for continued path extension: [982]
Pursuing extension from : GGCCACACGA...CTTCCTCAAG:W2(V380_D0) to successors: [CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)]
Exploring extension from node: 380 to node: 982
updatePathRecursively(readName=61DFRAAXX100204:2:13:7749:17373, locInSeq: 26 / 75, locInNode: 23 / 46, totalNumMm: 0

trying to continue the mapping to node CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)
-ALIGNING READ SEQ (61DFRAAXX100204:2:13:7749:17373)
CCTCATCAGCAAGAAGAAATCTTT 26
To VERTEX (CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)) SEQ:
CCTCATCAGCAAGAAGAAATCTTT 23
zipper alignment mm: 0
alignment divergence up to seq pos 50 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 47 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:2:13:7749:17373 base [50] ends at position  [47] within node: 982 totaling 0 mismatches. 
-reached end of vertex: 982, exploring next vertices for continued path extension: [440]
Pursuing extension from : CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1) to successors: [CTTTCCAAGTA:W8(V440_D2)]
Exploring extension from node: 982 to node: 440
updatePathRecursively(readName=61DFRAAXX100204:2:13:7749:17373, locInSeq: 50 / 75, locInNode: 23 / 33, totalNumMm: 0

trying to continue the mapping to node CTTTCCAAGTA:W8(V440_D2)
-ALIGNING READ SEQ (61DFRAAXX100204:2:13:7749:17373)
CTTTCCAAGTA 50
To VERTEX (CTTTCCAAGTA:W8(V440_D2)) SEQ:
CTTTCCAAGTA 23
zipper alignment mm: 0
alignment divergence up to seq pos 61 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 34 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:2:13:7749:17373 base [61] ends at position  [34] within node: 440 totaling 0 mismatches. 
-reached end of vertex: 440, exploring next vertices for continued path extension: [451]
Pursuing extension from : CTTTCCAAGTA:W8(V440_D2) to successors: [GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)]
Exploring extension from node: 440 to node: 451
updatePathRecursively(readName=61DFRAAXX100204:2:13:7749:17373, locInSeq: 61 / 75, locInNode: 23 / 96, totalNumMm: 0

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (61DFRAAXX100204:2:13:7749:17373)
GTGTCTTAACTCAGG 61
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
GTGTCTTAACTCAGG 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 38 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:2:13:7749:17373 with length: 76 and base [76] ends at position  [38] within node: 451 totaling 0 mismatches. 
61DFRAAXX100204:2:13:7749:17373 best path so far from vertex: 440 to : 451 = [451], with total mm: 0
Done with exploring paths from vertex: 440
Paths and scores found are: 
	explored path: [451] w/ mm: 0
	AND best selected was: [451] w/ mm: 0
61DFRAAXX100204:2:13:7749:17373 best path so far from vertex: 982 to : 440 = [440, 451], with total mm: 0
Done with exploring paths from vertex: 982
Paths and scores found are: 
	explored path: [440, 451] w/ mm: 0
	AND best selected was: [440, 451] w/ mm: 0
61DFRAAXX100204:2:13:7749:17373 best path so far from vertex: 380 to : 982 = [982, 440, 451], with total mm: 0
Done with exploring paths from vertex: 380
Paths and scores found are: 
	explored path: [982, 440, 451] w/ mm: 0
	AND best selected was: [982, 440, 451] w/ mm: 0
FINAL BEST PATH for 61DFRAAXX100204:2:13:7749:17373 is [380, 982, 440, 451] with total mm: 0
Read 61DFRAAXX100204:2:13:7749:17373 seq ACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGG threaded as: PATH_N_MM_COUNT: mismatches=0, path= [380, 982, 440, 451] positions:  [380,nodeEnd:59,readEnd:26] [982,nodeEnd:47,readEnd:50] [440,nodeEnd:34,readEnd:61] [451,nodeEnd:38,readEnd:76] , trimmed to: [380, 982, 440, 451]
Threaded Read as: 61DFRAAXX100204:2:13:7749:17373 : [380, 982, 440, 451]
ReadPath@Init: 61DFRAAXX100204:2:13:7749:17373 : [380, 982, 440, 451]

mapped read [11]Read: >61DFRAAXX100204:2:18:10392:2962/1	0	411	51	462		CTACTGGCTACAAACAGACTTCCTCAAGGCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCA	-
Read: 61DFRAAXX100204:2:18:10392:2962 has start: 0, end: 75 and sequence: CTACTGGCTACAAACAGACTTCCTCAAGGCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCA
after extracting substring: CTACTGGCTACAAACAGACTTCCTCAAGGCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCA
findPathInGraph: V:380, with seq: GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAG
trying to start the mapping to node 380 at position: 31


Threading read: 61DFRAAXX100204:2:18:10392:2962, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:2:18:10392:2962 sequence is:
CTACTGGCTACAAACAGACTTCCTCAAGGCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCA
updatePathRecursively(readName=61DFRAAXX100204:2:18:10392:2962, locInSeq: 0 / 75, locInNode: 31 / 58, totalNumMm: 0

trying to continue the mapping to node GGCCACACGA...CTTCCTCAAG:W2(V380_D0)
-ALIGNING READ SEQ (61DFRAAXX100204:2:18:10392:2962)
CTACTGGCTACAAACAGACTTCCTCAAG 0
To VERTEX (GGCCACACGA...CTTCCTCAAG:W2(V380_D0)) SEQ:
CTACTGGCTACAAACAGACTTCCTCAAG 31
zipper alignment mm: 0
alignment divergence up to seq pos 28 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 59 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:2:18:10392:2962 base [28] ends at position  [59] within node: 380 totaling 0 mismatches. 
-reached end of vertex: 380, exploring next vertices for continued path extension: [982]
Pursuing extension from : GGCCACACGA...CTTCCTCAAG:W2(V380_D0) to successors: [CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)]
Exploring extension from node: 380 to node: 982
updatePathRecursively(readName=61DFRAAXX100204:2:18:10392:2962, locInSeq: 28 / 75, locInNode: 23 / 46, totalNumMm: 0

trying to continue the mapping to node CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)
-ALIGNING READ SEQ (61DFRAAXX100204:2:18:10392:2962)
GCTCATCAGCAAGAAGAAATCTTT 28
To VERTEX (CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)) SEQ:
CCTCATCAGCAAGAAGAAATCTTT 23
zipper alignment mm: 1
alignment divergence up to seq pos 52 = mm: 1, div:0.01923077
local vertex alignment divergence = 1 / 47 = 0.021276595
Reached end of node sequence.  Read61DFRAAXX100204:2:18:10392:2962 base [52] ends at position  [47] within node: 982 totaling 1 mismatches. 
-reached end of vertex: 982, exploring next vertices for continued path extension: [440]
Pursuing extension from : CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1) to successors: [CTTTCCAAGTA:W8(V440_D2)]
Exploring extension from node: 982 to node: 440
updatePathRecursively(readName=61DFRAAXX100204:2:18:10392:2962, locInSeq: 52 / 75, locInNode: 23 / 33, totalNumMm: 1

trying to continue the mapping to node CTTTCCAAGTA:W8(V440_D2)
-ALIGNING READ SEQ (61DFRAAXX100204:2:18:10392:2962)
CTTTCCAAGTA 52
To VERTEX (CTTTCCAAGTA:W8(V440_D2)) SEQ:
CTTTCCAAGTA 23
zipper alignment mm: 0
alignment divergence up to seq pos 63 = mm: 1, div:0.015873017
local vertex alignment divergence = 0 / 34 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:2:18:10392:2962 base [63] ends at position  [34] within node: 440 totaling 0 mismatches. 
-reached end of vertex: 440, exploring next vertices for continued path extension: [451]
Pursuing extension from : CTTTCCAAGTA:W8(V440_D2) to successors: [GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)]
Exploring extension from node: 440 to node: 451
updatePathRecursively(readName=61DFRAAXX100204:2:18:10392:2962, locInSeq: 63 / 75, locInNode: 23 / 96, totalNumMm: 1

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (61DFRAAXX100204:2:18:10392:2962)
GTGTCTTAACTCA 63
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
GTGTCTTAACTCA 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 1, div:0.013157895
local vertex alignment divergence = 0 / 36 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:2:18:10392:2962 with length: 76 and base [76] ends at position  [36] within node: 451 totaling 0 mismatches. 
61DFRAAXX100204:2:18:10392:2962 best path so far from vertex: 440 to : 451 = [451], with total mm: 0
Done with exploring paths from vertex: 440
Paths and scores found are: 
	explored path: [451] w/ mm: 0
	AND best selected was: [451] w/ mm: 0
61DFRAAXX100204:2:18:10392:2962 best path so far from vertex: 982 to : 440 = [440, 451], with total mm: 0
Done with exploring paths from vertex: 982
Paths and scores found are: 
	explored path: [440, 451] w/ mm: 0
	AND best selected was: [440, 451] w/ mm: 0
61DFRAAXX100204:2:18:10392:2962 best path so far from vertex: 380 to : 982 = [982, 440, 451], with total mm: 1
Done with exploring paths from vertex: 380
Paths and scores found are: 
	explored path: [982, 440, 451] w/ mm: 1
	AND best selected was: [982, 440, 451] w/ mm: 1
FINAL BEST PATH for 61DFRAAXX100204:2:18:10392:2962 is [380, 982, 440, 451] with total mm: 1
Read 61DFRAAXX100204:2:18:10392:2962 seq CTACTGGCTACAAACAGACTTCCTCAAGGCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCA threaded as: PATH_N_MM_COUNT: mismatches=1, path= [380, 982, 440, 451] positions:  [380,nodeEnd:59,readEnd:28] [982,nodeEnd:47,readEnd:52] [440,nodeEnd:34,readEnd:63] [451,nodeEnd:36,readEnd:76] , trimmed to: [380, 982, 440, 451]
Threaded Read as: 61DFRAAXX100204:2:18:10392:2962 : [380, 982, 440, 451]
ReadPath@Init: 61DFRAAXX100204:2:18:10392:2962 : [380, 982, 440, 451]

mapped read [12]Read: >61DFRAAXX100204:2:27:5714:7307/1	0	657	51	708		GGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGG	-
Read: 61DFRAAXX100204:2:27:5714:7307 has start: 0, end: 75 and sequence: GGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGG
after extracting substring: GGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGG
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 108


Threading read: 61DFRAAXX100204:2:27:5714:7307, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:2:27:5714:7307 sequence is:
GGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGG
updatePathRecursively(readName=61DFRAAXX100204:2:27:5714:7307, locInSeq: 0 / 75, locInNode: 108 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (61DFRAAXX100204:2:27:5714:7307)
GGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGG 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
GGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGG 108
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 184 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:2:27:5714:7307 with length: 76 and base [76] ends at position  [184] within node: 549 totaling 0 mismatches. 
FINAL BEST PATH for 61DFRAAXX100204:2:27:5714:7307 is [549] with total mm: 0
Read 61DFRAAXX100204:2:27:5714:7307 seq GGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGG threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549] positions:  [549,nodeEnd:184,readEnd:76] , trimmed to: [549]
Threaded Read as: 61DFRAAXX100204:2:27:5714:7307 : [549]
ReadPath@Init: 61DFRAAXX100204:2:27:5714:7307 : [549]

mapped read [13]Read: >61DFRAAXX100204:2:33:12784:13782/1	0	606	51	657		TAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATG	-
Read: 61DFRAAXX100204:2:33:12784:13782 has start: 0, end: 75 and sequence: TAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATG
after extracting substring: TAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATG
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 57


Threading read: 61DFRAAXX100204:2:33:12784:13782, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:2:33:12784:13782 sequence is:
TAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATG
updatePathRecursively(readName=61DFRAAXX100204:2:33:12784:13782, locInSeq: 0 / 75, locInNode: 57 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (61DFRAAXX100204:2:33:12784:13782)
TAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATG 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
TAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATG 57
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 133 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:2:33:12784:13782 with length: 76 and base [76] ends at position  [133] within node: 549 totaling 0 mismatches. 
FINAL BEST PATH for 61DFRAAXX100204:2:33:12784:13782 is [549] with total mm: 0
Read 61DFRAAXX100204:2:33:12784:13782 seq TAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATG threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549] positions:  [549,nodeEnd:133,readEnd:76] , trimmed to: [549]
Threaded Read as: 61DFRAAXX100204:2:33:12784:13782 : [549]
ReadPath@Init: 61DFRAAXX100204:2:33:12784:13782 : [549]

mapped read [14]Read: >61DFRAAXX100204:2:34:11574:10433/2	0	422	51	473		AAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGG	-
Read: 61DFRAAXX100204:2:34:11574:10433 has start: 0, end: 75 and sequence: AAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGG
after extracting substring: AAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGG
findPathInGraph: V:982, with seq: GGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTT
trying to start the mapping to node 982 at position: 5


Threading read: 61DFRAAXX100204:2:34:11574:10433, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:2:34:11574:10433 sequence is:
AAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGG
updatePathRecursively(readName=61DFRAAXX100204:2:34:11574:10433, locInSeq: 0 / 75, locInNode: 5 / 46, totalNumMm: 0

trying to continue the mapping to node CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)
-ALIGNING READ SEQ (61DFRAAXX100204:2:34:11574:10433)
AAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTC 0
To VERTEX (CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)) SEQ:
CAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTT 5
shortcircuiting the zipper test, too many MM or execeeding local seq divergence
  *Trying again using full DP alignment:
-running Needleman-Wunsch alignment of vertex to read
Read               1 -AAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAA     49
                      |||||||||||||||||||||||||||||||||||||||||        
Vertex             1 CAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTT--------     42


vertex end gaps: 8
read end gaps: 0
mismatches encountered: 1
alignment divergence up to seq pos 41 = mm: 1, div:0.024390243
local vertex alignment divergence = 1 / 47 = 0.021276595
Reached end of node sequence.  Read61DFRAAXX100204:2:34:11574:10433 base [41] ends at position  [47] within node: 982 totaling 1 mismatches. 
-reached end of vertex: 982, exploring next vertices for continued path extension: [440]
Pursuing extension from : CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1) to successors: [CTTTCCAAGTA:W8(V440_D2)]
Exploring extension from node: 982 to node: 440
updatePathRecursively(readName=61DFRAAXX100204:2:34:11574:10433, locInSeq: 41 / 75, locInNode: 23 / 33, totalNumMm: 1

trying to continue the mapping to node CTTTCCAAGTA:W8(V440_D2)
-ALIGNING READ SEQ (61DFRAAXX100204:2:34:11574:10433)
CTTTCCAAGTA 41
To VERTEX (CTTTCCAAGTA:W8(V440_D2)) SEQ:
CTTTCCAAGTA 23
zipper alignment mm: 0
alignment divergence up to seq pos 52 = mm: 1, div:0.01923077
local vertex alignment divergence = 0 / 34 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:2:34:11574:10433 base [52] ends at position  [34] within node: 440 totaling 0 mismatches. 
-reached end of vertex: 440, exploring next vertices for continued path extension: [451]
Pursuing extension from : CTTTCCAAGTA:W8(V440_D2) to successors: [GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)]
Exploring extension from node: 440 to node: 451
updatePathRecursively(readName=61DFRAAXX100204:2:34:11574:10433, locInSeq: 52 / 75, locInNode: 23 / 96, totalNumMm: 1

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (61DFRAAXX100204:2:34:11574:10433)
GTGTCTTAACTCAGGAGATCATGG 52
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
GTGTCTTAACTCAGGAGATCATGG 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 1, div:0.013157895
local vertex alignment divergence = 0 / 47 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:2:34:11574:10433 with length: 76 and base [76] ends at position  [47] within node: 451 totaling 0 mismatches. 
61DFRAAXX100204:2:34:11574:10433 best path so far from vertex: 440 to : 451 = [451], with total mm: 0
Done with exploring paths from vertex: 440
Paths and scores found are: 
	explored path: [451] w/ mm: 0
	AND best selected was: [451] w/ mm: 0
61DFRAAXX100204:2:34:11574:10433 best path so far from vertex: 982 to : 440 = [440, 451], with total mm: 0
Done with exploring paths from vertex: 982
Paths and scores found are: 
	explored path: [440, 451] w/ mm: 0
	AND best selected was: [440, 451] w/ mm: 0
FINAL BEST PATH for 61DFRAAXX100204:2:34:11574:10433 is [982, 440, 451] with total mm: 1
Read 61DFRAAXX100204:2:34:11574:10433 seq AAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGG threaded as: PATH_N_MM_COUNT: mismatches=1, path= [982, 440, 451] positions:  [982,nodeEnd:47,readEnd:41] [440,nodeEnd:34,readEnd:52] [451,nodeEnd:47,readEnd:76] , trimmed to: [982, 440, 451]
Threaded Read as: 61DFRAAXX100204:2:34:11574:10433 : [982, 440, 451]
ReadPath@Init: 61DFRAAXX100204:2:34:11574:10433 : [982, 440, 451]

mapped read [15]Read: >61DFRAAXX100204:2:43:2649:2845/2	0	945	51	466		AGAATACAAAATGCCTTCCTCCAGCCTCATCAGCAGGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAG	-
Read: 61DFRAAXX100204:2:43:2649:2845 has start: 0, end: 75 and sequence: AGAATACAAAATGCCTTCCTCCAGCCTCATCAGCAGGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAG
after extracting substring: AGAATACAAAATGCCTTCCTCCAGCCTCATCAGCAGGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAG
findPathInGraph: V:945, with seq: AGAATACAAAATGCCTTCCTCCAGCCTCATCAGCAGGAAGAAATCTTTCTTTCCAAGTA
trying to start the mapping to node 945 at position: 0


Threading read: 61DFRAAXX100204:2:43:2649:2845, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:2:43:2649:2845 sequence is:
AGAATACAAAATGCCTTCCTCCAGCCTCATCAGCAGGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAG
updatePathRecursively(readName=61DFRAAXX100204:2:43:2649:2845, locInSeq: 0 / 75, locInNode: 0 / 58, totalNumMm: 0

trying to continue the mapping to node AGAATACAAA...TTTCCAAGTA:W1(V945_D0)
-ALIGNING READ SEQ (61DFRAAXX100204:2:43:2649:2845)
AGAATACAAAATGCCTTCCTCCAGCCTCATCAGCAGGAAGAAATCTTTCTTTCCAAGTA 0
To VERTEX (AGAATACAAA...TTTCCAAGTA:W1(V945_D0)) SEQ:
AGAATACAAAATGCCTTCCTCCAGCCTCATCAGCAGGAAGAAATCTTTCTTTCCAAGTA 0
zipper alignment mm: 0
alignment divergence up to seq pos 59 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 59 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:2:43:2649:2845 base [59] ends at position  [59] within node: 945 totaling 0 mismatches. 
-reached end of vertex: 945, exploring next vertices for continued path extension: [451]
Pursuing extension from : AGAATACAAA...TTTCCAAGTA:W1(V945_D0) to successors: [GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)]
Exploring extension from node: 945 to node: 451
updatePathRecursively(readName=61DFRAAXX100204:2:43:2649:2845, locInSeq: 59 / 75, locInNode: 23 / 96, totalNumMm: 0

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (61DFRAAXX100204:2:43:2649:2845)
GTGTCTTAACTCAGGAG 59
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
GTGTCTTAACTCAGGAG 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 40 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:2:43:2649:2845 with length: 76 and base [76] ends at position  [40] within node: 451 totaling 0 mismatches. 
61DFRAAXX100204:2:43:2649:2845 best path so far from vertex: 945 to : 451 = [451], with total mm: 0
Done with exploring paths from vertex: 945
Paths and scores found are: 
	explored path: [451] w/ mm: 0
	AND best selected was: [451] w/ mm: 0
FINAL BEST PATH for 61DFRAAXX100204:2:43:2649:2845 is [945, 451] with total mm: 0
Read 61DFRAAXX100204:2:43:2649:2845 seq AGAATACAAAATGCCTTCCTCCAGCCTCATCAGCAGGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAG threaded as: PATH_N_MM_COUNT: mismatches=0, path= [945, 451] positions:  [945,nodeEnd:59,readEnd:59] [451,nodeEnd:40,readEnd:76] , trimmed to: [945, 451]
Threaded Read as: 61DFRAAXX100204:2:43:2649:2845 : [945, 451]
ReadPath@Init: 61DFRAAXX100204:2:43:2649:2845 : [945, 451]

mapped read [16]Read: >61DFRAAXX100204:2:47:12270:6103/1	0	631	51	682		CCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGG	-
Read: 61DFRAAXX100204:2:47:12270:6103 has start: 0, end: 75 and sequence: CCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGG
after extracting substring: CCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGG
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 82


Threading read: 61DFRAAXX100204:2:47:12270:6103, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:2:47:12270:6103 sequence is:
CCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGG
updatePathRecursively(readName=61DFRAAXX100204:2:47:12270:6103, locInSeq: 0 / 75, locInNode: 82 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (61DFRAAXX100204:2:47:12270:6103)
CCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGG 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
CCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGG 82
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 158 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:2:47:12270:6103 with length: 76 and base [76] ends at position  [158] within node: 549 totaling 0 mismatches. 
FINAL BEST PATH for 61DFRAAXX100204:2:47:12270:6103 is [549] with total mm: 0
Read 61DFRAAXX100204:2:47:12270:6103 seq CCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGG threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549] positions:  [549,nodeEnd:158,readEnd:76] , trimmed to: [549]
Threaded Read as: 61DFRAAXX100204:2:47:12270:6103 : [549]
ReadPath@Init: 61DFRAAXX100204:2:47:12270:6103 : [549]

mapped read [17]Read: >61DFRAAXX100204:2:47:8841:7694/2	0	504	51	555		AGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACC	-
Read: 61DFRAAXX100204:2:47:8841:7694 has start: 0, end: 75 and sequence: AGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACC
after extracting substring: AGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACC
findPathInGraph: V:451, with seq: GAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT
trying to start the mapping to node 451 at position: 53


Threading read: 61DFRAAXX100204:2:47:8841:7694, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:2:47:8841:7694 sequence is:
AGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACC
updatePathRecursively(readName=61DFRAAXX100204:2:47:8841:7694, locInSeq: 0 / 75, locInNode: 53 / 96, totalNumMm: 0

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (61DFRAAXX100204:2:47:8841:7694)
AGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 0
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
AGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 53
zipper alignment mm: 0
alignment divergence up to seq pos 44 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 97 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:2:47:8841:7694 base [44] ends at position  [97] within node: 451 totaling 0 mismatches. 
-reached end of vertex: 451, exploring next vertices for continued path extension: [981]
Pursuing extension from : GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1) to successors: [GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)]
Exploring extension from node: 451 to node: 981
updatePathRecursively(readName=61DFRAAXX100204:2:47:8841:7694, locInSeq: 44 / 75, locInNode: 23 / 46, totalNumMm: 0

trying to continue the mapping to node GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)
-ALIGNING READ SEQ (61DFRAAXX100204:2:47:8841:7694)
GAGCACTCTGAACCCTGTGAGGCA 44
To VERTEX (GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)) SEQ:
GAGCACTCTGAACCCTGTGAGGCA 23
zipper alignment mm: 0
alignment divergence up to seq pos 68 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 47 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:2:47:8841:7694 base [68] ends at position  [47] within node: 981 totaling 0 mismatches. 
-reached end of vertex: 981, exploring next vertices for continued path extension: [549]
Pursuing extension from : GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1) to successors: [AGTCCACCAC...GGGAGCCACC:W6(V549_D3)]
Exploring extension from node: 981 to node: 549
updatePathRecursively(readName=61DFRAAXX100204:2:47:8841:7694, locInSeq: 68 / 75, locInNode: 23 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (61DFRAAXX100204:2:47:8841:7694)
AGTCCACC 68
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
AGTCCACC 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 31 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:2:47:8841:7694 with length: 76 and base [76] ends at position  [31] within node: 549 totaling 0 mismatches. 
61DFRAAXX100204:2:47:8841:7694 best path so far from vertex: 981 to : 549 = [549], with total mm: 0
Done with exploring paths from vertex: 981
Paths and scores found are: 
	explored path: [549] w/ mm: 0
	AND best selected was: [549] w/ mm: 0
61DFRAAXX100204:2:47:8841:7694 best path so far from vertex: 451 to : 981 = [981, 549], with total mm: 0
Done with exploring paths from vertex: 451
Paths and scores found are: 
	explored path: [981, 549] w/ mm: 0
	AND best selected was: [981, 549] w/ mm: 0
FINAL BEST PATH for 61DFRAAXX100204:2:47:8841:7694 is [451, 981, 549] with total mm: 0
Read 61DFRAAXX100204:2:47:8841:7694 seq AGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACC threaded as: PATH_N_MM_COUNT: mismatches=0, path= [451, 981, 549] positions:  [451,nodeEnd:97,readEnd:44] [981,nodeEnd:47,readEnd:68] [549,nodeEnd:31,readEnd:76] , trimmed to: [451, 981, 549]
Threaded Read as: 61DFRAAXX100204:2:47:8841:7694 : [451, 981, 549]
ReadPath@Init: 61DFRAAXX100204:2:47:8841:7694 : [451, 981, 549]

mapped read [18]Read: >61DFRAAXX100204:2:59:18912:18239/1	0	485	51	536		CAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAAC	-
Read: 61DFRAAXX100204:2:59:18912:18239 has start: 0, end: 75 and sequence: CAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAAC
after extracting substring: CAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAAC
findPathInGraph: V:451, with seq: GAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT
trying to start the mapping to node 451 at position: 34


Threading read: 61DFRAAXX100204:2:59:18912:18239, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:2:59:18912:18239 sequence is:
CAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAAC
updatePathRecursively(readName=61DFRAAXX100204:2:59:18912:18239, locInSeq: 0 / 75, locInNode: 34 / 96, totalNumMm: 0

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (61DFRAAXX100204:2:59:18912:18239)
CAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 0
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
CAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 34
zipper alignment mm: 0
alignment divergence up to seq pos 63 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 97 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:2:59:18912:18239 base [63] ends at position  [97] within node: 451 totaling 0 mismatches. 
-reached end of vertex: 451, exploring next vertices for continued path extension: [981]
Pursuing extension from : GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1) to successors: [GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)]
Exploring extension from node: 451 to node: 981
updatePathRecursively(readName=61DFRAAXX100204:2:59:18912:18239, locInSeq: 63 / 75, locInNode: 23 / 46, totalNumMm: 0

trying to continue the mapping to node GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)
-ALIGNING READ SEQ (61DFRAAXX100204:2:59:18912:18239)
GAGCACTCTGAAC 63
To VERTEX (GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)) SEQ:
GAGCACTCTGAAC 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 36 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:2:59:18912:18239 with length: 76 and base [76] ends at position  [36] within node: 981 totaling 0 mismatches. 
61DFRAAXX100204:2:59:18912:18239 best path so far from vertex: 451 to : 981 = [981], with total mm: 0
Done with exploring paths from vertex: 451
Paths and scores found are: 
	explored path: [981] w/ mm: 0
	AND best selected was: [981] w/ mm: 0
FINAL BEST PATH for 61DFRAAXX100204:2:59:18912:18239 is [451, 981] with total mm: 0
Read 61DFRAAXX100204:2:59:18912:18239 seq CAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAAC threaded as: PATH_N_MM_COUNT: mismatches=0, path= [451, 981] positions:  [451,nodeEnd:97,readEnd:63] [981,nodeEnd:36,readEnd:76] , trimmed to: [451, 981]
Threaded Read as: 61DFRAAXX100204:2:59:18912:18239 : [451, 981]
ReadPath@Init: 61DFRAAXX100204:2:59:18912:18239 : [451, 981]

mapped read [19]Read: >61DFRAAXX100204:2:59:18912:18239/2	0	612	51	663		AGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGAC	-
Read: 61DFRAAXX100204:2:59:18912:18239 has start: 0, end: 75 and sequence: AGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGAC
after extracting substring: AGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGAC
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 63


Threading read: 61DFRAAXX100204:2:59:18912:18239, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:2:59:18912:18239 sequence is:
AGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGAC
updatePathRecursively(readName=61DFRAAXX100204:2:59:18912:18239, locInSeq: 0 / 75, locInNode: 63 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (61DFRAAXX100204:2:59:18912:18239)
AGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGAC 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
AGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGAC 63
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 139 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:2:59:18912:18239 with length: 76 and base [76] ends at position  [139] within node: 549 totaling 0 mismatches. 
FINAL BEST PATH for 61DFRAAXX100204:2:59:18912:18239 is [549] with total mm: 0
Read 61DFRAAXX100204:2:59:18912:18239 seq AGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGAC threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549] positions:  [549,nodeEnd:139,readEnd:76] , trimmed to: [549]
Threaded Read as: 61DFRAAXX100204:2:59:18912:18239 : [549]
ReadPath@Init: 61DFRAAXX100204:2:59:18912:18239 : [549]

mapped read [20]Read: >61DFRAAXX100204:2:61:13619:6070/2	0	786	51	741		GCTAGGGGAAATAGGGGAGCTCCAAACCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCC	-
Read: 61DFRAAXX100204:2:61:13619:6070 has start: 0, end: 75 and sequence: GCTAGGGGAAATAGGGGAGCTCCAAACCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCC
after extracting substring: GCTAGGGGAAATAGGGGAGCTCCAAACCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCC
findPathInGraph: V:786, with seq: GCTAGGGGAAATAGGGGAGCTCCAAACCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 786 at position: 0


Threading read: 61DFRAAXX100204:2:61:13619:6070, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:2:61:13619:6070 sequence is:
GCTAGGGGAAATAGGGGAGCTCCAAACCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCC
updatePathRecursively(readName=61DFRAAXX100204:2:61:13619:6070, locInSeq: 0 / 75, locInNode: 0 / 49, totalNumMm: 0

trying to continue the mapping to node GCTAGGGGAA...GGGAGCCACC:W1(V786_D0)
-ALIGNING READ SEQ (61DFRAAXX100204:2:61:13619:6070)
GCTAGGGGAAATAGGGGAGCTCCAAACCCAGCCCCGTGGAGGGAGCCACC 0
To VERTEX (GCTAGGGGAA...GGGAGCCACC:W1(V786_D0)) SEQ:
GCTAGGGGAAATAGGGGAGCTCCAAACCCAGCCCCGTGGAGGGAGCCACC 0
zipper alignment mm: 0
alignment divergence up to seq pos 50 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 50 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:2:61:13619:6070 base [50] ends at position  [50] within node: 786 totaling 0 mismatches. 
-reached end of vertex: 786, exploring next vertices for continued path extension: [717]
Pursuing extension from : GCTAGGGGAA...GGGAGCCACC:W1(V786_D0) to successors: [AGCCACAGGT...CTTCCTGTGA:W5(V717_D1)]
Exploring extension from node: 786 to node: 717
updatePathRecursively(readName=61DFRAAXX100204:2:61:13619:6070, locInSeq: 50 / 75, locInNode: 23 / 64, totalNumMm: 0

trying to continue the mapping to node AGCCACAGGT...CTTCCTGTGA:W5(V717_D1)
-ALIGNING READ SEQ (61DFRAAXX100204:2:61:13619:6070)
AGCCACAGGTACCTGATGGAAATGCC 50
To VERTEX (AGCCACAGGT...CTTCCTGTGA:W5(V717_D1)) SEQ:
AGCCACAGGTACCTGATGGAAATGCC 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 49 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:2:61:13619:6070 with length: 76 and base [76] ends at position  [49] within node: 717 totaling 0 mismatches. 
61DFRAAXX100204:2:61:13619:6070 best path so far from vertex: 786 to : 717 = [717], with total mm: 0
Done with exploring paths from vertex: 786
Paths and scores found are: 
	explored path: [717] w/ mm: 0
	AND best selected was: [717] w/ mm: 0
FINAL BEST PATH for 61DFRAAXX100204:2:61:13619:6070 is [786, 717] with total mm: 0
Read 61DFRAAXX100204:2:61:13619:6070 seq GCTAGGGGAAATAGGGGAGCTCCAAACCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCC threaded as: PATH_N_MM_COUNT: mismatches=0, path= [786, 717] positions:  [786,nodeEnd:50,readEnd:50] [717,nodeEnd:49,readEnd:76] , trimmed to: [786, 717]
Threaded Read as: 61DFRAAXX100204:2:61:13619:6070 : [786, 717]
ReadPath@Init: 61DFRAAXX100204:2:61:13619:6070 : [786, 717]

mapped read [21]Read: >61DFRAAXX100204:2:64:15138:21125/1	0	706	51	757		GAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCACTTCCTGTGA	-
Read: 61DFRAAXX100204:2:64:15138:21125 has start: 0, end: 75 and sequence: GAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCACTTCCTGTGA
after extracting substring: GAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCACTTCCTGTGA
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 157


Threading read: 61DFRAAXX100204:2:64:15138:21125, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:2:64:15138:21125 sequence is:
GAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCACTTCCTGTGA
updatePathRecursively(readName=61DFRAAXX100204:2:64:15138:21125, locInSeq: 0 / 75, locInNode: 157 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (61DFRAAXX100204:2:64:15138:21125)
GAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
GAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC 157
zipper alignment mm: 0
alignment divergence up to seq pos 34 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 191 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:2:64:15138:21125 base [34] ends at position  [191] within node: 549 totaling 0 mismatches. 
-reached end of vertex: 549, exploring next vertices for continued path extension: [717]
Pursuing extension from : AGTCCACCAC...GGGAGCCACC:W6(V549_D3) to successors: [AGCCACAGGT...CTTCCTGTGA:W5(V717_D1)]
Exploring extension from node: 549 to node: 717
updatePathRecursively(readName=61DFRAAXX100204:2:64:15138:21125, locInSeq: 34 / 75, locInNode: 23 / 64, totalNumMm: 0

trying to continue the mapping to node AGCCACAGGT...CTTCCTGTGA:W5(V717_D1)
-ALIGNING READ SEQ (61DFRAAXX100204:2:64:15138:21125)
AGCCACAGGTACCTGATGGAAATGCCGGCTCACTTCCTGTGA 34
To VERTEX (AGCCACAGGT...CTTCCTGTGA:W5(V717_D1)) SEQ:
AGCCACAGGTACCTGATGGAAATGCCGGCTCACTTCCTGTGA 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 65 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:2:64:15138:21125 with length: 76 and base [76] ends at position  [65] within node: 717 totaling 0 mismatches. 
61DFRAAXX100204:2:64:15138:21125 best path so far from vertex: 549 to : 717 = [717], with total mm: 0
Done with exploring paths from vertex: 549
Paths and scores found are: 
	explored path: [717] w/ mm: 0
	AND best selected was: [717] w/ mm: 0
FINAL BEST PATH for 61DFRAAXX100204:2:64:15138:21125 is [549, 717] with total mm: 0
Read 61DFRAAXX100204:2:64:15138:21125 seq GAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCACTTCCTGTGA threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549, 717] positions:  [549,nodeEnd:191,readEnd:34] [717,nodeEnd:65,readEnd:76] , trimmed to: [549, 717]
Threaded Read as: 61DFRAAXX100204:2:64:15138:21125 : [549, 717]
ReadPath@Init: 61DFRAAXX100204:2:64:15138:21125 : [549, 717]

mapped read [22]Read: >61DFRAAXX100204:2:75:16853:12097/1	0	507	51	558		GGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACC	-
Read: 61DFRAAXX100204:2:75:16853:12097 has start: 0, end: 75 and sequence: GGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACC
after extracting substring: GGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACC
findPathInGraph: V:451, with seq: GAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT
trying to start the mapping to node 451 at position: 56


Threading read: 61DFRAAXX100204:2:75:16853:12097, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:2:75:16853:12097 sequence is:
GGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACC
updatePathRecursively(readName=61DFRAAXX100204:2:75:16853:12097, locInSeq: 0 / 75, locInNode: 56 / 96, totalNumMm: 0

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (61DFRAAXX100204:2:75:16853:12097)
GGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 0
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
GGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 56
zipper alignment mm: 0
alignment divergence up to seq pos 41 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 97 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:2:75:16853:12097 base [41] ends at position  [97] within node: 451 totaling 0 mismatches. 
-reached end of vertex: 451, exploring next vertices for continued path extension: [981]
Pursuing extension from : GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1) to successors: [GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)]
Exploring extension from node: 451 to node: 981
updatePathRecursively(readName=61DFRAAXX100204:2:75:16853:12097, locInSeq: 41 / 75, locInNode: 23 / 46, totalNumMm: 0

trying to continue the mapping to node GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)
-ALIGNING READ SEQ (61DFRAAXX100204:2:75:16853:12097)
GAGCACTCTGAACCCTGTGAGGCA 41
To VERTEX (GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)) SEQ:
GAGCACTCTGAACCCTGTGAGGCA 23
zipper alignment mm: 0
alignment divergence up to seq pos 65 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 47 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:2:75:16853:12097 base [65] ends at position  [47] within node: 981 totaling 0 mismatches. 
-reached end of vertex: 981, exploring next vertices for continued path extension: [549]
Pursuing extension from : GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1) to successors: [AGTCCACCAC...GGGAGCCACC:W6(V549_D3)]
Exploring extension from node: 981 to node: 549
updatePathRecursively(readName=61DFRAAXX100204:2:75:16853:12097, locInSeq: 65 / 75, locInNode: 23 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (61DFRAAXX100204:2:75:16853:12097)
AGTCCACCACC 65
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
AGTCCACCACC 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 34 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:2:75:16853:12097 with length: 76 and base [76] ends at position  [34] within node: 549 totaling 0 mismatches. 
61DFRAAXX100204:2:75:16853:12097 best path so far from vertex: 981 to : 549 = [549], with total mm: 0
Done with exploring paths from vertex: 981
Paths and scores found are: 
	explored path: [549] w/ mm: 0
	AND best selected was: [549] w/ mm: 0
61DFRAAXX100204:2:75:16853:12097 best path so far from vertex: 451 to : 981 = [981, 549], with total mm: 0
Done with exploring paths from vertex: 451
Paths and scores found are: 
	explored path: [981, 549] w/ mm: 0
	AND best selected was: [981, 549] w/ mm: 0
FINAL BEST PATH for 61DFRAAXX100204:2:75:16853:12097 is [451, 981, 549] with total mm: 0
Read 61DFRAAXX100204:2:75:16853:12097 seq GGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACC threaded as: PATH_N_MM_COUNT: mismatches=0, path= [451, 981, 549] positions:  [451,nodeEnd:97,readEnd:41] [981,nodeEnd:47,readEnd:65] [549,nodeEnd:34,readEnd:76] , trimmed to: [451, 981, 549]
Threaded Read as: 61DFRAAXX100204:2:75:16853:12097 : [451, 981, 549]
ReadPath@Init: 61DFRAAXX100204:2:75:16853:12097 : [451, 981, 549]

mapped read [23]Read: >61DFRAAXX100204:2:90:12533:11254/1	0	696	51	747		GGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCA	-
Read: 61DFRAAXX100204:2:90:12533:11254 has start: 0, end: 75 and sequence: GGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCA
after extracting substring: GGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCA
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 147


Threading read: 61DFRAAXX100204:2:90:12533:11254, length: 76, allowing for 4 max mismatches.
Read: 61DFRAAXX100204:2:90:12533:11254 sequence is:
GGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCA
updatePathRecursively(readName=61DFRAAXX100204:2:90:12533:11254, locInSeq: 0 / 75, locInNode: 147 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (61DFRAAXX100204:2:90:12533:11254)
GGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
GGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC 147
zipper alignment mm: 0
alignment divergence up to seq pos 44 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 191 = 0.0
Reached end of node sequence.  Read61DFRAAXX100204:2:90:12533:11254 base [44] ends at position  [191] within node: 549 totaling 0 mismatches. 
-reached end of vertex: 549, exploring next vertices for continued path extension: [717]
Pursuing extension from : AGTCCACCAC...GGGAGCCACC:W6(V549_D3) to successors: [AGCCACAGGT...CTTCCTGTGA:W5(V717_D1)]
Exploring extension from node: 549 to node: 717
updatePathRecursively(readName=61DFRAAXX100204:2:90:12533:11254, locInSeq: 44 / 75, locInNode: 23 / 64, totalNumMm: 0

trying to continue the mapping to node AGCCACAGGT...CTTCCTGTGA:W5(V717_D1)
-ALIGNING READ SEQ (61DFRAAXX100204:2:90:12533:11254)
AGCCACAGGTACCTGATGGAAATGCCGGCTCA 44
To VERTEX (AGCCACAGGT...CTTCCTGTGA:W5(V717_D1)) SEQ:
AGCCACAGGTACCTGATGGAAATGCCGGCTCA 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 55 = 0.0
Reached end of read sequence.  Read61DFRAAXX100204:2:90:12533:11254 with length: 76 and base [76] ends at position  [55] within node: 717 totaling 0 mismatches. 
61DFRAAXX100204:2:90:12533:11254 best path so far from vertex: 549 to : 717 = [717], with total mm: 0
Done with exploring paths from vertex: 549
Paths and scores found are: 
	explored path: [717] w/ mm: 0
	AND best selected was: [717] w/ mm: 0
FINAL BEST PATH for 61DFRAAXX100204:2:90:12533:11254 is [549, 717] with total mm: 0
Read 61DFRAAXX100204:2:90:12533:11254 seq GGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCA threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549, 717] positions:  [549,nodeEnd:191,readEnd:44] [717,nodeEnd:55,readEnd:76] , trimmed to: [549, 717]
Threaded Read as: 61DFRAAXX100204:2:90:12533:11254 : [549, 717]
ReadPath@Init: 61DFRAAXX100204:2:90:12533:11254 : [549, 717]

mapped read [24]Read: >r261DFRAAXX100204:1:112:16960:13532/1	0	654	51	705		AGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGA	-
Read: r261DFRAAXX100204:1:112:16960:13532 has start: 0, end: 75 and sequence: AGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGA
after extracting substring: AGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGA
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 105


Threading read: r261DFRAAXX100204:1:112:16960:13532, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:1:112:16960:13532 sequence is:
AGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGA
updatePathRecursively(readName=r261DFRAAXX100204:1:112:16960:13532, locInSeq: 0 / 75, locInNode: 105 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (r261DFRAAXX100204:1:112:16960:13532)
AGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGA 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
AGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGA 105
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 181 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:1:112:16960:13532 with length: 76 and base [76] ends at position  [181] within node: 549 totaling 0 mismatches. 
FINAL BEST PATH for r261DFRAAXX100204:1:112:16960:13532 is [549] with total mm: 0
Read r261DFRAAXX100204:1:112:16960:13532 seq AGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGA threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549] positions:  [549,nodeEnd:181,readEnd:76] , trimmed to: [549]
Threaded Read as: r261DFRAAXX100204:1:112:16960:13532 : [549]
ReadPath@Init: r261DFRAAXX100204:1:112:16960:13532 : [549]

mapped read [25]Read: >r261DFRAAXX100204:1:113:7690:4285/2	0	538	51	589		GAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAG	-
Read: r261DFRAAXX100204:1:113:7690:4285 has start: 0, end: 75 and sequence: GAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAG
after extracting substring: GAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAG
findPathInGraph: V:981, with seq: GGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCA
trying to start the mapping to node 981 at position: 12


Threading read: r261DFRAAXX100204:1:113:7690:4285, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:1:113:7690:4285 sequence is:
GAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAG
updatePathRecursively(readName=r261DFRAAXX100204:1:113:7690:4285, locInSeq: 0 / 75, locInNode: 12 / 46, totalNumMm: 0

trying to continue the mapping to node GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)
-ALIGNING READ SEQ (r261DFRAAXX100204:1:113:7690:4285)
GAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAA 0
To VERTEX (GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)) SEQ:
GGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCA 12
shortcircuiting the zipper test, too many MM or execeeding local seq divergence
  *Trying again using full DP alignment:
-running Needleman-Wunsch alignment of vertex to read
Read               1 -GAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCG     49
                      ||||||||||||||||||||||||||||||||||               
Vertex             1 GGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCA---------------     35


vertex end gaps: 15
read end gaps: 0
mismatches encountered: 1
alignment divergence up to seq pos 34 = mm: 1, div:0.029411765
local vertex alignment divergence = 1 / 47 = 0.021276595
Reached end of node sequence.  Readr261DFRAAXX100204:1:113:7690:4285 base [34] ends at position  [47] within node: 981 totaling 1 mismatches. 
-reached end of vertex: 981, exploring next vertices for continued path extension: [549]
Pursuing extension from : GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1) to successors: [AGTCCACCAC...GGGAGCCACC:W6(V549_D3)]
Exploring extension from node: 981 to node: 549
updatePathRecursively(readName=r261DFRAAXX100204:1:113:7690:4285, locInSeq: 34 / 75, locInNode: 23 / 190, totalNumMm: 1

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (r261DFRAAXX100204:1:113:7690:4285)
AGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAG 34
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
AGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAG 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 1, div:0.013157895
local vertex alignment divergence = 0 / 65 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:1:113:7690:4285 with length: 76 and base [76] ends at position  [65] within node: 549 totaling 0 mismatches. 
r261DFRAAXX100204:1:113:7690:4285 best path so far from vertex: 981 to : 549 = [549], with total mm: 0
Done with exploring paths from vertex: 981
Paths and scores found are: 
	explored path: [549] w/ mm: 0
	AND best selected was: [549] w/ mm: 0
FINAL BEST PATH for r261DFRAAXX100204:1:113:7690:4285 is [981, 549] with total mm: 1
Read r261DFRAAXX100204:1:113:7690:4285 seq GAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAG threaded as: PATH_N_MM_COUNT: mismatches=1, path= [981, 549] positions:  [981,nodeEnd:47,readEnd:34] [549,nodeEnd:65,readEnd:76] , trimmed to: [981, 549]
Threaded Read as: r261DFRAAXX100204:1:113:7690:4285 : [981, 549]
ReadPath@Init: r261DFRAAXX100204:1:113:7690:4285 : [981, 549]

mapped read [26]Read: >r261DFRAAXX100204:1:115:8211:5116/2	0	473	51	524		AGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTG	-
Read: r261DFRAAXX100204:1:115:8211:5116 has start: 0, end: 75 and sequence: AGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTG
after extracting substring: AGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTG
findPathInGraph: V:451, with seq: GAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT
trying to start the mapping to node 451 at position: 22


Threading read: r261DFRAAXX100204:1:115:8211:5116, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:1:115:8211:5116 sequence is:
AGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTG
updatePathRecursively(readName=r261DFRAAXX100204:1:115:8211:5116, locInSeq: 0 / 75, locInNode: 22 / 96, totalNumMm: 0

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (r261DFRAAXX100204:1:115:8211:5116)
AGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 0
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
AGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 22
zipper alignment mm: 0
alignment divergence up to seq pos 75 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 97 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:1:115:8211:5116 base [75] ends at position  [97] within node: 451 totaling 0 mismatches. 
-reached end of vertex: 451, exploring next vertices for continued path extension: [981]
Pursuing extension from : GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1) to successors: [GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)]
Exploring extension from node: 451 to node: 981
updatePathRecursively(readName=r261DFRAAXX100204:1:115:8211:5116, locInSeq: 75 / 75, locInNode: 23 / 46, totalNumMm: 0

trying to continue the mapping to node GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)
-ALIGNING READ SEQ (r261DFRAAXX100204:1:115:8211:5116)
G 75
To VERTEX (GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)) SEQ:
G 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 24 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:1:115:8211:5116 with length: 76 and base [76] ends at position  [24] within node: 981 totaling 0 mismatches. 
r261DFRAAXX100204:1:115:8211:5116 best path so far from vertex: 451 to : 981 = [981], with total mm: 0
Done with exploring paths from vertex: 451
Paths and scores found are: 
	explored path: [981] w/ mm: 0
	AND best selected was: [981] w/ mm: 0
FINAL BEST PATH for r261DFRAAXX100204:1:115:8211:5116 is [451, 981] with total mm: 0
Read r261DFRAAXX100204:1:115:8211:5116 seq AGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTG threaded as: PATH_N_MM_COUNT: mismatches=0, path= [451, 981] positions:  [451,nodeEnd:97,readEnd:75] [981,nodeEnd:24,readEnd:76] , trimmed to: [451, 981]
Threaded Read as: r261DFRAAXX100204:1:115:8211:5116 : [451, 981]
ReadPath@Init: r261DFRAAXX100204:1:115:8211:5116 : [451, 981]

mapped read [27]Read: >r261DFRAAXX100204:1:20:5538:6890/2	0	567	51	618		AGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCT	-
Read: r261DFRAAXX100204:1:20:5538:6890 has start: 0, end: 75 and sequence: AGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCT
after extracting substring: AGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCT
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 18


Threading read: r261DFRAAXX100204:1:20:5538:6890, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:1:20:5538:6890 sequence is:
AGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCT
updatePathRecursively(readName=r261DFRAAXX100204:1:20:5538:6890, locInSeq: 0 / 75, locInNode: 18 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (r261DFRAAXX100204:1:20:5538:6890)
AGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCT 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
AGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCT 18
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 94 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:1:20:5538:6890 with length: 76 and base [76] ends at position  [94] within node: 549 totaling 0 mismatches. 
FINAL BEST PATH for r261DFRAAXX100204:1:20:5538:6890 is [549] with total mm: 0
Read r261DFRAAXX100204:1:20:5538:6890 seq AGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCT threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549] positions:  [549,nodeEnd:94,readEnd:76] , trimmed to: [549]
Threaded Read as: r261DFRAAXX100204:1:20:5538:6890 : [549]
ReadPath@Init: r261DFRAAXX100204:1:20:5538:6890 : [549]

mapped read [28]Read: >r261DFRAAXX100204:1:39:8793:18196/1	0	380	51	431		GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGA	-
Read: r261DFRAAXX100204:1:39:8793:18196 has start: 0, end: 75 and sequence: GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGA
after extracting substring: GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGA
findPathInGraph: V:380, with seq: GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAG
trying to start the mapping to node 380 at position: 0


Threading read: r261DFRAAXX100204:1:39:8793:18196, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:1:39:8793:18196 sequence is:
GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGA
updatePathRecursively(readName=r261DFRAAXX100204:1:39:8793:18196, locInSeq: 0 / 75, locInNode: 0 / 58, totalNumMm: 0

trying to continue the mapping to node GGCCACACGA...CTTCCTCAAG:W2(V380_D0)
-ALIGNING READ SEQ (r261DFRAAXX100204:1:39:8793:18196)
GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAG 0
To VERTEX (GGCCACACGA...CTTCCTCAAG:W2(V380_D0)) SEQ:
GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAG 0
zipper alignment mm: 0
alignment divergence up to seq pos 59 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 59 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:1:39:8793:18196 base [59] ends at position  [59] within node: 380 totaling 0 mismatches. 
-reached end of vertex: 380, exploring next vertices for continued path extension: [982]
Pursuing extension from : GGCCACACGA...CTTCCTCAAG:W2(V380_D0) to successors: [CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)]
Exploring extension from node: 380 to node: 982
updatePathRecursively(readName=r261DFRAAXX100204:1:39:8793:18196, locInSeq: 59 / 75, locInNode: 23 / 46, totalNumMm: 0

trying to continue the mapping to node CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)
-ALIGNING READ SEQ (r261DFRAAXX100204:1:39:8793:18196)
CCTCATCAGCAAGAAGA 59
To VERTEX (CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)) SEQ:
CCTCATCAGCAAGAAGA 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 40 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:1:39:8793:18196 with length: 76 and base [76] ends at position  [40] within node: 982 totaling 0 mismatches. 
r261DFRAAXX100204:1:39:8793:18196 best path so far from vertex: 380 to : 982 = [982], with total mm: 0
Done with exploring paths from vertex: 380
Paths and scores found are: 
	explored path: [982] w/ mm: 0
	AND best selected was: [982] w/ mm: 0
FINAL BEST PATH for r261DFRAAXX100204:1:39:8793:18196 is [380, 982] with total mm: 0
Read r261DFRAAXX100204:1:39:8793:18196 seq GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGA threaded as: PATH_N_MM_COUNT: mismatches=0, path= [380, 982] positions:  [380,nodeEnd:59,readEnd:59] [982,nodeEnd:40,readEnd:76] , trimmed to: [380, 982]
Threaded Read as: r261DFRAAXX100204:1:39:8793:18196 : [380, 982]
ReadPath@Init: r261DFRAAXX100204:1:39:8793:18196 : [380, 982]

mapped read [29]Read: >r261DFRAAXX100204:1:39:8793:18196/2	0	502	51	553		GAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTCAGCACTCTGAACCCTGTGAGGCAAGTCCA	-
Read: r261DFRAAXX100204:1:39:8793:18196 has start: 0, end: 75 and sequence: GAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTCAGCACTCTGAACCCTGTGAGGCAAGTCCA
after extracting substring: GAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTCAGCACTCTGAACCCTGTGAGGCAAGTCCA
findPathInGraph: V:451, with seq: GAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT
trying to start the mapping to node 451 at position: 51


Threading read: r261DFRAAXX100204:1:39:8793:18196, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:1:39:8793:18196 sequence is:
GAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTCAGCACTCTGAACCCTGTGAGGCAAGTCCA
updatePathRecursively(readName=r261DFRAAXX100204:1:39:8793:18196, locInSeq: 0 / 75, locInNode: 51 / 96, totalNumMm: 0

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (r261DFRAAXX100204:1:39:8793:18196)
GAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 0
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
GAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 51
zipper alignment mm: 0
alignment divergence up to seq pos 46 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 97 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:1:39:8793:18196 base [46] ends at position  [97] within node: 451 totaling 0 mismatches. 
-reached end of vertex: 451, exploring next vertices for continued path extension: [981]
Pursuing extension from : GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1) to successors: [GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)]
Exploring extension from node: 451 to node: 981
updatePathRecursively(readName=r261DFRAAXX100204:1:39:8793:18196, locInSeq: 46 / 75, locInNode: 23 / 46, totalNumMm: 0

trying to continue the mapping to node GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)
-ALIGNING READ SEQ (r261DFRAAXX100204:1:39:8793:18196)
CAGCACTCTGAACCCTGTGAGGCA 46
To VERTEX (GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)) SEQ:
GAGCACTCTGAACCCTGTGAGGCA 23
zipper alignment mm: 1
alignment divergence up to seq pos 70 = mm: 1, div:0.014285714
local vertex alignment divergence = 1 / 47 = 0.021276595
Reached end of node sequence.  Readr261DFRAAXX100204:1:39:8793:18196 base [70] ends at position  [47] within node: 981 totaling 1 mismatches. 
-reached end of vertex: 981, exploring next vertices for continued path extension: [549]
Pursuing extension from : GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1) to successors: [AGTCCACCAC...GGGAGCCACC:W6(V549_D3)]
Exploring extension from node: 981 to node: 549
updatePathRecursively(readName=r261DFRAAXX100204:1:39:8793:18196, locInSeq: 70 / 75, locInNode: 23 / 190, totalNumMm: 1

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (r261DFRAAXX100204:1:39:8793:18196)
AGTCCA 70
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
AGTCCA 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 1, div:0.013157895
local vertex alignment divergence = 0 / 29 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:1:39:8793:18196 with length: 76 and base [76] ends at position  [29] within node: 549 totaling 0 mismatches. 
r261DFRAAXX100204:1:39:8793:18196 best path so far from vertex: 981 to : 549 = [549], with total mm: 0
Done with exploring paths from vertex: 981
Paths and scores found are: 
	explored path: [549] w/ mm: 0
	AND best selected was: [549] w/ mm: 0
r261DFRAAXX100204:1:39:8793:18196 best path so far from vertex: 451 to : 981 = [981, 549], with total mm: 1
Done with exploring paths from vertex: 451
Paths and scores found are: 
	explored path: [981, 549] w/ mm: 1
	AND best selected was: [981, 549] w/ mm: 1
FINAL BEST PATH for r261DFRAAXX100204:1:39:8793:18196 is [451, 981, 549] with total mm: 1
Read r261DFRAAXX100204:1:39:8793:18196 seq GAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTCAGCACTCTGAACCCTGTGAGGCAAGTCCA threaded as: PATH_N_MM_COUNT: mismatches=1, path= [451, 981, 549] positions:  [451,nodeEnd:97,readEnd:46] [981,nodeEnd:47,readEnd:70] [549,nodeEnd:29,readEnd:76] , trimmed to: [451, 981, 549]
Threaded Read as: r261DFRAAXX100204:1:39:8793:18196 : [451, 981, 549]
ReadPath@Init: r261DFRAAXX100204:1:39:8793:18196 : [451, 981, 549]

mapped read [30]Read: >r261DFRAAXX100204:1:67:9991:2232/1	0	401	51	452		GTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTG	-
Read: r261DFRAAXX100204:1:67:9991:2232 has start: 0, end: 75 and sequence: GTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTG
after extracting substring: GTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTG
findPathInGraph: V:380, with seq: GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAG
trying to start the mapping to node 380 at position: 21


Threading read: r261DFRAAXX100204:1:67:9991:2232, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:1:67:9991:2232 sequence is:
GTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTG
updatePathRecursively(readName=r261DFRAAXX100204:1:67:9991:2232, locInSeq: 0 / 75, locInNode: 21 / 58, totalNumMm: 0

trying to continue the mapping to node GGCCACACGA...CTTCCTCAAG:W2(V380_D0)
-ALIGNING READ SEQ (r261DFRAAXX100204:1:67:9991:2232)
GTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAG 0
To VERTEX (GGCCACACGA...CTTCCTCAAG:W2(V380_D0)) SEQ:
GTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAG 21
zipper alignment mm: 0
alignment divergence up to seq pos 38 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 59 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:1:67:9991:2232 base [38] ends at position  [59] within node: 380 totaling 0 mismatches. 
-reached end of vertex: 380, exploring next vertices for continued path extension: [982]
Pursuing extension from : GGCCACACGA...CTTCCTCAAG:W2(V380_D0) to successors: [CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)]
Exploring extension from node: 380 to node: 982
updatePathRecursively(readName=r261DFRAAXX100204:1:67:9991:2232, locInSeq: 38 / 75, locInNode: 23 / 46, totalNumMm: 0

trying to continue the mapping to node CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)
-ALIGNING READ SEQ (r261DFRAAXX100204:1:67:9991:2232)
CCTCATCAGCAAGAAGAAATCTTT 38
To VERTEX (CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)) SEQ:
CCTCATCAGCAAGAAGAAATCTTT 23
zipper alignment mm: 0
alignment divergence up to seq pos 62 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 47 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:1:67:9991:2232 base [62] ends at position  [47] within node: 982 totaling 0 mismatches. 
-reached end of vertex: 982, exploring next vertices for continued path extension: [440]
Pursuing extension from : CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1) to successors: [CTTTCCAAGTA:W8(V440_D2)]
Exploring extension from node: 982 to node: 440
updatePathRecursively(readName=r261DFRAAXX100204:1:67:9991:2232, locInSeq: 62 / 75, locInNode: 23 / 33, totalNumMm: 0

trying to continue the mapping to node CTTTCCAAGTA:W8(V440_D2)
-ALIGNING READ SEQ (r261DFRAAXX100204:1:67:9991:2232)
CTTTCCAAGTA 62
To VERTEX (CTTTCCAAGTA:W8(V440_D2)) SEQ:
CTTTCCAAGTA 23
zipper alignment mm: 0
alignment divergence up to seq pos 73 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 34 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:1:67:9991:2232 base [73] ends at position  [34] within node: 440 totaling 0 mismatches. 
-reached end of vertex: 440, exploring next vertices for continued path extension: [451]
Pursuing extension from : CTTTCCAAGTA:W8(V440_D2) to successors: [GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)]
Exploring extension from node: 440 to node: 451
updatePathRecursively(readName=r261DFRAAXX100204:1:67:9991:2232, locInSeq: 73 / 75, locInNode: 23 / 96, totalNumMm: 0

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (r261DFRAAXX100204:1:67:9991:2232)
GTG 73
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
GTG 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 26 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:1:67:9991:2232 with length: 76 and base [76] ends at position  [26] within node: 451 totaling 0 mismatches. 
r261DFRAAXX100204:1:67:9991:2232 best path so far from vertex: 440 to : 451 = [451], with total mm: 0
Done with exploring paths from vertex: 440
Paths and scores found are: 
	explored path: [451] w/ mm: 0
	AND best selected was: [451] w/ mm: 0
r261DFRAAXX100204:1:67:9991:2232 best path so far from vertex: 982 to : 440 = [440, 451], with total mm: 0
Done with exploring paths from vertex: 982
Paths and scores found are: 
	explored path: [440, 451] w/ mm: 0
	AND best selected was: [440, 451] w/ mm: 0
r261DFRAAXX100204:1:67:9991:2232 best path so far from vertex: 380 to : 982 = [982, 440, 451], with total mm: 0
Done with exploring paths from vertex: 380
Paths and scores found are: 
	explored path: [982, 440, 451] w/ mm: 0
	AND best selected was: [982, 440, 451] w/ mm: 0
FINAL BEST PATH for r261DFRAAXX100204:1:67:9991:2232 is [380, 982, 440, 451] with total mm: 0
Read r261DFRAAXX100204:1:67:9991:2232 seq GTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTG threaded as: PATH_N_MM_COUNT: mismatches=0, path= [380, 982, 440, 451] positions:  [380,nodeEnd:59,readEnd:38] [982,nodeEnd:47,readEnd:62] [440,nodeEnd:34,readEnd:73] [451,nodeEnd:26,readEnd:76] , trimmed to: [380, 982, 440, 451]
Threaded Read as: r261DFRAAXX100204:1:67:9991:2232 : [380, 982, 440, 451]
ReadPath@Init: r261DFRAAXX100204:1:67:9991:2232 : [380, 982, 440, 451]

mapped read [31]Read: >r261DFRAAXX100204:1:70:1041:1268/1	18	680	25	687		GTGACAAAGAAAAGAGGTTGACAGACTCTCTAAGGGACATATGGGAGCTAGATAGAAAGCCCCGAGGAGGTAGCCG	-
Read: r261DFRAAXX100204:1:70:1041:1268 has start: 18, end: 49 and sequence: GTGACAAAGAAAAGAGGTTGACAGACTCTCTAAGGGACATATGGGAGCTAGATAGAAAGCCCCGAGGAGGTAGCCG
after extracting substring: TGACAGACTCTCTAAGGGACATATGGGAGCTA
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 131


Threading read: r261DFRAAXX100204:1:70:1041:1268, length: 32, allowing for 2 max mismatches.
Read: r261DFRAAXX100204:1:70:1041:1268 sequence is:
TGACAGACTCTCTAAGGGACATATGGGAGCTA
updatePathRecursively(readName=r261DFRAAXX100204:1:70:1041:1268, locInSeq: 0 / 31, locInNode: 131 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (r261DFRAAXX100204:1:70:1041:1268)
TGACAGACTCTCTAAGGGACATATGGGAGCTA 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
TGACAGACTCTCTAAGGGACATATGGGAGCTA 131
zipper alignment mm: 0
alignment divergence up to seq pos 32 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 163 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:1:70:1041:1268 with length: 32 and base [32] ends at position  [163] within node: 549 totaling 0 mismatches. 
FINAL BEST PATH for r261DFRAAXX100204:1:70:1041:1268 is [549] with total mm: 0
Read r261DFRAAXX100204:1:70:1041:1268 seq TGACAGACTCTCTAAGGGACATATGGGAGCTA threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549] positions:  [549,nodeEnd:163,readEnd:32] , trimmed to: [549]
Threaded Read as: r261DFRAAXX100204:1:70:1041:1268 : [549]
ReadPath@Init: r261DFRAAXX100204:1:70:1041:1268 : [549]

mapped read [32]Read: >r261DFRAAXX100204:1:85:13720:15251/1	0	639	51	690		TGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACAT	-
Read: r261DFRAAXX100204:1:85:13720:15251 has start: 0, end: 75 and sequence: TGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACAT
after extracting substring: TGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACAT
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 90


Threading read: r261DFRAAXX100204:1:85:13720:15251, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:1:85:13720:15251 sequence is:
TGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACAT
updatePathRecursively(readName=r261DFRAAXX100204:1:85:13720:15251, locInSeq: 0 / 75, locInNode: 90 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (r261DFRAAXX100204:1:85:13720:15251)
TGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACAT 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
TGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACAT 90
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 166 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:1:85:13720:15251 with length: 76 and base [76] ends at position  [166] within node: 549 totaling 0 mismatches. 
FINAL BEST PATH for r261DFRAAXX100204:1:85:13720:15251 is [549] with total mm: 0
Read r261DFRAAXX100204:1:85:13720:15251 seq TGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACAT threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549] positions:  [549,nodeEnd:166,readEnd:76] , trimmed to: [549]
Threaded Read as: r261DFRAAXX100204:1:85:13720:15251 : [549]
ReadPath@Init: r261DFRAAXX100204:1:85:13720:15251 : [549]

mapped read [33]Read: >r261DFRAAXX100204:2:13:7749:17373/2	0	413	51	464		ACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGG	-
Read: r261DFRAAXX100204:2:13:7749:17373 has start: 0, end: 75 and sequence: ACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGG
after extracting substring: ACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGG
findPathInGraph: V:380, with seq: GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAG
trying to start the mapping to node 380 at position: 33


Threading read: r261DFRAAXX100204:2:13:7749:17373, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:2:13:7749:17373 sequence is:
ACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGG
updatePathRecursively(readName=r261DFRAAXX100204:2:13:7749:17373, locInSeq: 0 / 75, locInNode: 33 / 58, totalNumMm: 0

trying to continue the mapping to node GGCCACACGA...CTTCCTCAAG:W2(V380_D0)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:13:7749:17373)
ACTGGCTACAAACAGACTTCCTCAAG 0
To VERTEX (GGCCACACGA...CTTCCTCAAG:W2(V380_D0)) SEQ:
ACTGGCTACAAACAGACTTCCTCAAG 33
zipper alignment mm: 0
alignment divergence up to seq pos 26 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 59 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:2:13:7749:17373 base [26] ends at position  [59] within node: 380 totaling 0 mismatches. 
-reached end of vertex: 380, exploring next vertices for continued path extension: [982]
Pursuing extension from : GGCCACACGA...CTTCCTCAAG:W2(V380_D0) to successors: [CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)]
Exploring extension from node: 380 to node: 982
updatePathRecursively(readName=r261DFRAAXX100204:2:13:7749:17373, locInSeq: 26 / 75, locInNode: 23 / 46, totalNumMm: 0

trying to continue the mapping to node CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:13:7749:17373)
CCTCATCAGCAAGAAGAAATCTTT 26
To VERTEX (CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)) SEQ:
CCTCATCAGCAAGAAGAAATCTTT 23
zipper alignment mm: 0
alignment divergence up to seq pos 50 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 47 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:2:13:7749:17373 base [50] ends at position  [47] within node: 982 totaling 0 mismatches. 
-reached end of vertex: 982, exploring next vertices for continued path extension: [440]
Pursuing extension from : CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1) to successors: [CTTTCCAAGTA:W8(V440_D2)]
Exploring extension from node: 982 to node: 440
updatePathRecursively(readName=r261DFRAAXX100204:2:13:7749:17373, locInSeq: 50 / 75, locInNode: 23 / 33, totalNumMm: 0

trying to continue the mapping to node CTTTCCAAGTA:W8(V440_D2)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:13:7749:17373)
CTTTCCAAGTA 50
To VERTEX (CTTTCCAAGTA:W8(V440_D2)) SEQ:
CTTTCCAAGTA 23
zipper alignment mm: 0
alignment divergence up to seq pos 61 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 34 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:2:13:7749:17373 base [61] ends at position  [34] within node: 440 totaling 0 mismatches. 
-reached end of vertex: 440, exploring next vertices for continued path extension: [451]
Pursuing extension from : CTTTCCAAGTA:W8(V440_D2) to successors: [GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)]
Exploring extension from node: 440 to node: 451
updatePathRecursively(readName=r261DFRAAXX100204:2:13:7749:17373, locInSeq: 61 / 75, locInNode: 23 / 96, totalNumMm: 0

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:13:7749:17373)
GTGTCTTAACTCAGG 61
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
GTGTCTTAACTCAGG 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 38 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:2:13:7749:17373 with length: 76 and base [76] ends at position  [38] within node: 451 totaling 0 mismatches. 
r261DFRAAXX100204:2:13:7749:17373 best path so far from vertex: 440 to : 451 = [451], with total mm: 0
Done with exploring paths from vertex: 440
Paths and scores found are: 
	explored path: [451] w/ mm: 0
	AND best selected was: [451] w/ mm: 0
r261DFRAAXX100204:2:13:7749:17373 best path so far from vertex: 982 to : 440 = [440, 451], with total mm: 0
Done with exploring paths from vertex: 982
Paths and scores found are: 
	explored path: [440, 451] w/ mm: 0
	AND best selected was: [440, 451] w/ mm: 0
r261DFRAAXX100204:2:13:7749:17373 best path so far from vertex: 380 to : 982 = [982, 440, 451], with total mm: 0
Done with exploring paths from vertex: 380
Paths and scores found are: 
	explored path: [982, 440, 451] w/ mm: 0
	AND best selected was: [982, 440, 451] w/ mm: 0
FINAL BEST PATH for r261DFRAAXX100204:2:13:7749:17373 is [380, 982, 440, 451] with total mm: 0
Read r261DFRAAXX100204:2:13:7749:17373 seq ACTGGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGG threaded as: PATH_N_MM_COUNT: mismatches=0, path= [380, 982, 440, 451] positions:  [380,nodeEnd:59,readEnd:26] [982,nodeEnd:47,readEnd:50] [440,nodeEnd:34,readEnd:61] [451,nodeEnd:38,readEnd:76] , trimmed to: [380, 982, 440, 451]
Threaded Read as: r261DFRAAXX100204:2:13:7749:17373 : [380, 982, 440, 451]
ReadPath@Init: r261DFRAAXX100204:2:13:7749:17373 : [380, 982, 440, 451]

mapped read [34]Read: >r261DFRAAXX100204:2:18:10392:2962/1	0	411	51	462		CTACTGGCTACAAACAGACTTCCTCAAGGCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCA	-
Read: r261DFRAAXX100204:2:18:10392:2962 has start: 0, end: 75 and sequence: CTACTGGCTACAAACAGACTTCCTCAAGGCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCA
after extracting substring: CTACTGGCTACAAACAGACTTCCTCAAGGCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCA
findPathInGraph: V:380, with seq: GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGACTTCCTCAAG
trying to start the mapping to node 380 at position: 31


Threading read: r261DFRAAXX100204:2:18:10392:2962, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:2:18:10392:2962 sequence is:
CTACTGGCTACAAACAGACTTCCTCAAGGCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCA
updatePathRecursively(readName=r261DFRAAXX100204:2:18:10392:2962, locInSeq: 0 / 75, locInNode: 31 / 58, totalNumMm: 0

trying to continue the mapping to node GGCCACACGA...CTTCCTCAAG:W2(V380_D0)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:18:10392:2962)
CTACTGGCTACAAACAGACTTCCTCAAG 0
To VERTEX (GGCCACACGA...CTTCCTCAAG:W2(V380_D0)) SEQ:
CTACTGGCTACAAACAGACTTCCTCAAG 31
zipper alignment mm: 0
alignment divergence up to seq pos 28 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 59 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:2:18:10392:2962 base [28] ends at position  [59] within node: 380 totaling 0 mismatches. 
-reached end of vertex: 380, exploring next vertices for continued path extension: [982]
Pursuing extension from : GGCCACACGA...CTTCCTCAAG:W2(V380_D0) to successors: [CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)]
Exploring extension from node: 380 to node: 982
updatePathRecursively(readName=r261DFRAAXX100204:2:18:10392:2962, locInSeq: 28 / 75, locInNode: 23 / 46, totalNumMm: 0

trying to continue the mapping to node CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:18:10392:2962)
GCTCATCAGCAAGAAGAAATCTTT 28
To VERTEX (CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)) SEQ:
CCTCATCAGCAAGAAGAAATCTTT 23
zipper alignment mm: 1
alignment divergence up to seq pos 52 = mm: 1, div:0.01923077
local vertex alignment divergence = 1 / 47 = 0.021276595
Reached end of node sequence.  Readr261DFRAAXX100204:2:18:10392:2962 base [52] ends at position  [47] within node: 982 totaling 1 mismatches. 
-reached end of vertex: 982, exploring next vertices for continued path extension: [440]
Pursuing extension from : CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1) to successors: [CTTTCCAAGTA:W8(V440_D2)]
Exploring extension from node: 982 to node: 440
updatePathRecursively(readName=r261DFRAAXX100204:2:18:10392:2962, locInSeq: 52 / 75, locInNode: 23 / 33, totalNumMm: 1

trying to continue the mapping to node CTTTCCAAGTA:W8(V440_D2)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:18:10392:2962)
CTTTCCAAGTA 52
To VERTEX (CTTTCCAAGTA:W8(V440_D2)) SEQ:
CTTTCCAAGTA 23
zipper alignment mm: 0
alignment divergence up to seq pos 63 = mm: 1, div:0.015873017
local vertex alignment divergence = 0 / 34 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:2:18:10392:2962 base [63] ends at position  [34] within node: 440 totaling 0 mismatches. 
-reached end of vertex: 440, exploring next vertices for continued path extension: [451]
Pursuing extension from : CTTTCCAAGTA:W8(V440_D2) to successors: [GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)]
Exploring extension from node: 440 to node: 451
updatePathRecursively(readName=r261DFRAAXX100204:2:18:10392:2962, locInSeq: 63 / 75, locInNode: 23 / 96, totalNumMm: 1

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:18:10392:2962)
GTGTCTTAACTCA 63
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
GTGTCTTAACTCA 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 1, div:0.013157895
local vertex alignment divergence = 0 / 36 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:2:18:10392:2962 with length: 76 and base [76] ends at position  [36] within node: 451 totaling 0 mismatches. 
r261DFRAAXX100204:2:18:10392:2962 best path so far from vertex: 440 to : 451 = [451], with total mm: 0
Done with exploring paths from vertex: 440
Paths and scores found are: 
	explored path: [451] w/ mm: 0
	AND best selected was: [451] w/ mm: 0
r261DFRAAXX100204:2:18:10392:2962 best path so far from vertex: 982 to : 440 = [440, 451], with total mm: 0
Done with exploring paths from vertex: 982
Paths and scores found are: 
	explored path: [440, 451] w/ mm: 0
	AND best selected was: [440, 451] w/ mm: 0
r261DFRAAXX100204:2:18:10392:2962 best path so far from vertex: 380 to : 982 = [982, 440, 451], with total mm: 1
Done with exploring paths from vertex: 380
Paths and scores found are: 
	explored path: [982, 440, 451] w/ mm: 1
	AND best selected was: [982, 440, 451] w/ mm: 1
FINAL BEST PATH for r261DFRAAXX100204:2:18:10392:2962 is [380, 982, 440, 451] with total mm: 1
Read r261DFRAAXX100204:2:18:10392:2962 seq CTACTGGCTACAAACAGACTTCCTCAAGGCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCA threaded as: PATH_N_MM_COUNT: mismatches=1, path= [380, 982, 440, 451] positions:  [380,nodeEnd:59,readEnd:28] [982,nodeEnd:47,readEnd:52] [440,nodeEnd:34,readEnd:63] [451,nodeEnd:36,readEnd:76] , trimmed to: [380, 982, 440, 451]
Threaded Read as: r261DFRAAXX100204:2:18:10392:2962 : [380, 982, 440, 451]
ReadPath@Init: r261DFRAAXX100204:2:18:10392:2962 : [380, 982, 440, 451]

mapped read [35]Read: >r261DFRAAXX100204:2:27:5714:7307/1	0	657	51	708		GGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGG	-
Read: r261DFRAAXX100204:2:27:5714:7307 has start: 0, end: 75 and sequence: GGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGG
after extracting substring: GGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGG
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 108


Threading read: r261DFRAAXX100204:2:27:5714:7307, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:2:27:5714:7307 sequence is:
GGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGG
updatePathRecursively(readName=r261DFRAAXX100204:2:27:5714:7307, locInSeq: 0 / 75, locInNode: 108 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:27:5714:7307)
GGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGG 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
GGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGG 108
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 184 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:2:27:5714:7307 with length: 76 and base [76] ends at position  [184] within node: 549 totaling 0 mismatches. 
FINAL BEST PATH for r261DFRAAXX100204:2:27:5714:7307 is [549] with total mm: 0
Read r261DFRAAXX100204:2:27:5714:7307 seq GGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGG threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549] positions:  [549,nodeEnd:184,readEnd:76] , trimmed to: [549]
Threaded Read as: r261DFRAAXX100204:2:27:5714:7307 : [549]
ReadPath@Init: r261DFRAAXX100204:2:27:5714:7307 : [549]

mapped read [36]Read: >r261DFRAAXX100204:2:33:12784:13782/1	0	606	51	657		TAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATG	-
Read: r261DFRAAXX100204:2:33:12784:13782 has start: 0, end: 75 and sequence: TAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATG
after extracting substring: TAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATG
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 57


Threading read: r261DFRAAXX100204:2:33:12784:13782, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:2:33:12784:13782 sequence is:
TAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATG
updatePathRecursively(readName=r261DFRAAXX100204:2:33:12784:13782, locInSeq: 0 / 75, locInNode: 57 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:33:12784:13782)
TAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATG 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
TAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATG 57
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 133 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:2:33:12784:13782 with length: 76 and base [76] ends at position  [133] within node: 549 totaling 0 mismatches. 
FINAL BEST PATH for r261DFRAAXX100204:2:33:12784:13782 is [549] with total mm: 0
Read r261DFRAAXX100204:2:33:12784:13782 seq TAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATG threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549] positions:  [549,nodeEnd:133,readEnd:76] , trimmed to: [549]
Threaded Read as: r261DFRAAXX100204:2:33:12784:13782 : [549]
ReadPath@Init: r261DFRAAXX100204:2:33:12784:13782 : [549]

mapped read [37]Read: >r261DFRAAXX100204:2:34:11574:10433/2	0	422	51	473		AAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGG	-
Read: r261DFRAAXX100204:2:34:11574:10433 has start: 0, end: 75 and sequence: AAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGG
after extracting substring: AAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGG
findPathInGraph: V:982, with seq: GGCTACAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTT
trying to start the mapping to node 982 at position: 5


Threading read: r261DFRAAXX100204:2:34:11574:10433, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:2:34:11574:10433 sequence is:
AAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGG
updatePathRecursively(readName=r261DFRAAXX100204:2:34:11574:10433, locInSeq: 0 / 75, locInNode: 5 / 46, totalNumMm: 0

trying to continue the mapping to node CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:34:11574:10433)
AAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTC 0
To VERTEX (CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1)) SEQ:
CAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTT 5
shortcircuiting the zipper test, too many MM or execeeding local seq divergence
  *Trying again using full DP alignment:
-running Needleman-Wunsch alignment of vertex to read
Read               1 -AAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAA     49
                      |||||||||||||||||||||||||||||||||||||||||        
Vertex             1 CAAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTT--------     42


vertex end gaps: 8
read end gaps: 0
mismatches encountered: 1
alignment divergence up to seq pos 41 = mm: 1, div:0.024390243
local vertex alignment divergence = 1 / 47 = 0.021276595
Reached end of node sequence.  Readr261DFRAAXX100204:2:34:11574:10433 base [41] ends at position  [47] within node: 982 totaling 1 mismatches. 
-reached end of vertex: 982, exploring next vertices for continued path extension: [440]
Pursuing extension from : CCTCATCAGCAAGAAGAAATCTTT:W7(V982_D-1) to successors: [CTTTCCAAGTA:W8(V440_D2)]
Exploring extension from node: 982 to node: 440
updatePathRecursively(readName=r261DFRAAXX100204:2:34:11574:10433, locInSeq: 41 / 75, locInNode: 23 / 33, totalNumMm: 1

trying to continue the mapping to node CTTTCCAAGTA:W8(V440_D2)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:34:11574:10433)
CTTTCCAAGTA 41
To VERTEX (CTTTCCAAGTA:W8(V440_D2)) SEQ:
CTTTCCAAGTA 23
zipper alignment mm: 0
alignment divergence up to seq pos 52 = mm: 1, div:0.01923077
local vertex alignment divergence = 0 / 34 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:2:34:11574:10433 base [52] ends at position  [34] within node: 440 totaling 0 mismatches. 
-reached end of vertex: 440, exploring next vertices for continued path extension: [451]
Pursuing extension from : CTTTCCAAGTA:W8(V440_D2) to successors: [GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)]
Exploring extension from node: 440 to node: 451
updatePathRecursively(readName=r261DFRAAXX100204:2:34:11574:10433, locInSeq: 52 / 75, locInNode: 23 / 96, totalNumMm: 1

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:34:11574:10433)
GTGTCTTAACTCAGGAGATCATGG 52
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
GTGTCTTAACTCAGGAGATCATGG 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 1, div:0.013157895
local vertex alignment divergence = 0 / 47 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:2:34:11574:10433 with length: 76 and base [76] ends at position  [47] within node: 451 totaling 0 mismatches. 
r261DFRAAXX100204:2:34:11574:10433 best path so far from vertex: 440 to : 451 = [451], with total mm: 0
Done with exploring paths from vertex: 440
Paths and scores found are: 
	explored path: [451] w/ mm: 0
	AND best selected was: [451] w/ mm: 0
r261DFRAAXX100204:2:34:11574:10433 best path so far from vertex: 982 to : 440 = [440, 451], with total mm: 0
Done with exploring paths from vertex: 982
Paths and scores found are: 
	explored path: [440, 451] w/ mm: 0
	AND best selected was: [440, 451] w/ mm: 0
FINAL BEST PATH for r261DFRAAXX100204:2:34:11574:10433 is [982, 440, 451] with total mm: 1
Read r261DFRAAXX100204:2:34:11574:10433 seq AAACAGACTTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGG threaded as: PATH_N_MM_COUNT: mismatches=1, path= [982, 440, 451] positions:  [982,nodeEnd:47,readEnd:41] [440,nodeEnd:34,readEnd:52] [451,nodeEnd:47,readEnd:76] , trimmed to: [982, 440, 451]
Threaded Read as: r261DFRAAXX100204:2:34:11574:10433 : [982, 440, 451]
ReadPath@Init: r261DFRAAXX100204:2:34:11574:10433 : [982, 440, 451]

mapped read [38]Read: >r261DFRAAXX100204:2:43:2649:2845/2	0	945	51	466		AGAATACAAAATGCCTTCCTCCAGCCTCATCAGCAGGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAG	-
Read: r261DFRAAXX100204:2:43:2649:2845 has start: 0, end: 75 and sequence: AGAATACAAAATGCCTTCCTCCAGCCTCATCAGCAGGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAG
after extracting substring: AGAATACAAAATGCCTTCCTCCAGCCTCATCAGCAGGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAG
findPathInGraph: V:945, with seq: AGAATACAAAATGCCTTCCTCCAGCCTCATCAGCAGGAAGAAATCTTTCTTTCCAAGTA
trying to start the mapping to node 945 at position: 0


Threading read: r261DFRAAXX100204:2:43:2649:2845, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:2:43:2649:2845 sequence is:
AGAATACAAAATGCCTTCCTCCAGCCTCATCAGCAGGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAG
updatePathRecursively(readName=r261DFRAAXX100204:2:43:2649:2845, locInSeq: 0 / 75, locInNode: 0 / 58, totalNumMm: 0

trying to continue the mapping to node AGAATACAAA...TTTCCAAGTA:W1(V945_D0)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:43:2649:2845)
AGAATACAAAATGCCTTCCTCCAGCCTCATCAGCAGGAAGAAATCTTTCTTTCCAAGTA 0
To VERTEX (AGAATACAAA...TTTCCAAGTA:W1(V945_D0)) SEQ:
AGAATACAAAATGCCTTCCTCCAGCCTCATCAGCAGGAAGAAATCTTTCTTTCCAAGTA 0
zipper alignment mm: 0
alignment divergence up to seq pos 59 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 59 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:2:43:2649:2845 base [59] ends at position  [59] within node: 945 totaling 0 mismatches. 
-reached end of vertex: 945, exploring next vertices for continued path extension: [451]
Pursuing extension from : AGAATACAAA...TTTCCAAGTA:W1(V945_D0) to successors: [GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)]
Exploring extension from node: 945 to node: 451
updatePathRecursively(readName=r261DFRAAXX100204:2:43:2649:2845, locInSeq: 59 / 75, locInNode: 23 / 96, totalNumMm: 0

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:43:2649:2845)
GTGTCTTAACTCAGGAG 59
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
GTGTCTTAACTCAGGAG 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 40 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:2:43:2649:2845 with length: 76 and base [76] ends at position  [40] within node: 451 totaling 0 mismatches. 
r261DFRAAXX100204:2:43:2649:2845 best path so far from vertex: 945 to : 451 = [451], with total mm: 0
Done with exploring paths from vertex: 945
Paths and scores found are: 
	explored path: [451] w/ mm: 0
	AND best selected was: [451] w/ mm: 0
FINAL BEST PATH for r261DFRAAXX100204:2:43:2649:2845 is [945, 451] with total mm: 0
Read r261DFRAAXX100204:2:43:2649:2845 seq AGAATACAAAATGCCTTCCTCCAGCCTCATCAGCAGGAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAG threaded as: PATH_N_MM_COUNT: mismatches=0, path= [945, 451] positions:  [945,nodeEnd:59,readEnd:59] [451,nodeEnd:40,readEnd:76] , trimmed to: [945, 451]
Threaded Read as: r261DFRAAXX100204:2:43:2649:2845 : [945, 451]
ReadPath@Init: r261DFRAAXX100204:2:43:2649:2845 : [945, 451]

mapped read [39]Read: >r261DFRAAXX100204:2:47:12270:6103/1	0	631	51	682		CCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGG	-
Read: r261DFRAAXX100204:2:47:12270:6103 has start: 0, end: 75 and sequence: CCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGG
after extracting substring: CCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGG
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 82


Threading read: r261DFRAAXX100204:2:47:12270:6103, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:2:47:12270:6103 sequence is:
CCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGG
updatePathRecursively(readName=r261DFRAAXX100204:2:47:12270:6103, locInSeq: 0 / 75, locInNode: 82 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:47:12270:6103)
CCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGG 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
CCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGG 82
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 158 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:2:47:12270:6103 with length: 76 and base [76] ends at position  [158] within node: 549 totaling 0 mismatches. 
FINAL BEST PATH for r261DFRAAXX100204:2:47:12270:6103 is [549] with total mm: 0
Read r261DFRAAXX100204:2:47:12270:6103 seq CCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGG threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549] positions:  [549,nodeEnd:158,readEnd:76] , trimmed to: [549]
Threaded Read as: r261DFRAAXX100204:2:47:12270:6103 : [549]
ReadPath@Init: r261DFRAAXX100204:2:47:12270:6103 : [549]

mapped read [40]Read: >r261DFRAAXX100204:2:47:8841:7694/2	0	504	51	555		AGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACC	-
Read: r261DFRAAXX100204:2:47:8841:7694 has start: 0, end: 75 and sequence: AGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACC
after extracting substring: AGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACC
findPathInGraph: V:451, with seq: GAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT
trying to start the mapping to node 451 at position: 53


Threading read: r261DFRAAXX100204:2:47:8841:7694, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:2:47:8841:7694 sequence is:
AGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACC
updatePathRecursively(readName=r261DFRAAXX100204:2:47:8841:7694, locInSeq: 0 / 75, locInNode: 53 / 96, totalNumMm: 0

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:47:8841:7694)
AGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 0
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
AGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 53
zipper alignment mm: 0
alignment divergence up to seq pos 44 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 97 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:2:47:8841:7694 base [44] ends at position  [97] within node: 451 totaling 0 mismatches. 
-reached end of vertex: 451, exploring next vertices for continued path extension: [981]
Pursuing extension from : GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1) to successors: [GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)]
Exploring extension from node: 451 to node: 981
updatePathRecursively(readName=r261DFRAAXX100204:2:47:8841:7694, locInSeq: 44 / 75, locInNode: 23 / 46, totalNumMm: 0

trying to continue the mapping to node GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:47:8841:7694)
GAGCACTCTGAACCCTGTGAGGCA 44
To VERTEX (GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)) SEQ:
GAGCACTCTGAACCCTGTGAGGCA 23
zipper alignment mm: 0
alignment divergence up to seq pos 68 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 47 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:2:47:8841:7694 base [68] ends at position  [47] within node: 981 totaling 0 mismatches. 
-reached end of vertex: 981, exploring next vertices for continued path extension: [549]
Pursuing extension from : GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1) to successors: [AGTCCACCAC...GGGAGCCACC:W6(V549_D3)]
Exploring extension from node: 981 to node: 549
updatePathRecursively(readName=r261DFRAAXX100204:2:47:8841:7694, locInSeq: 68 / 75, locInNode: 23 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:47:8841:7694)
AGTCCACC 68
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
AGTCCACC 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 31 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:2:47:8841:7694 with length: 76 and base [76] ends at position  [31] within node: 549 totaling 0 mismatches. 
r261DFRAAXX100204:2:47:8841:7694 best path so far from vertex: 981 to : 549 = [549], with total mm: 0
Done with exploring paths from vertex: 981
Paths and scores found are: 
	explored path: [549] w/ mm: 0
	AND best selected was: [549] w/ mm: 0
r261DFRAAXX100204:2:47:8841:7694 best path so far from vertex: 451 to : 981 = [981, 549], with total mm: 0
Done with exploring paths from vertex: 451
Paths and scores found are: 
	explored path: [981, 549] w/ mm: 0
	AND best selected was: [981, 549] w/ mm: 0
FINAL BEST PATH for r261DFRAAXX100204:2:47:8841:7694 is [451, 981, 549] with total mm: 0
Read r261DFRAAXX100204:2:47:8841:7694 seq AGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACC threaded as: PATH_N_MM_COUNT: mismatches=0, path= [451, 981, 549] positions:  [451,nodeEnd:97,readEnd:44] [981,nodeEnd:47,readEnd:68] [549,nodeEnd:31,readEnd:76] , trimmed to: [451, 981, 549]
Threaded Read as: r261DFRAAXX100204:2:47:8841:7694 : [451, 981, 549]
ReadPath@Init: r261DFRAAXX100204:2:47:8841:7694 : [451, 981, 549]

mapped read [41]Read: >r261DFRAAXX100204:2:59:18912:18239/1	0	485	51	536		CAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAAC	-
Read: r261DFRAAXX100204:2:59:18912:18239 has start: 0, end: 75 and sequence: CAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAAC
after extracting substring: CAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAAC
findPathInGraph: V:451, with seq: GAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT
trying to start the mapping to node 451 at position: 34


Threading read: r261DFRAAXX100204:2:59:18912:18239, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:2:59:18912:18239 sequence is:
CAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAAC
updatePathRecursively(readName=r261DFRAAXX100204:2:59:18912:18239, locInSeq: 0 / 75, locInNode: 34 / 96, totalNumMm: 0

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:59:18912:18239)
CAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 0
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
CAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 34
zipper alignment mm: 0
alignment divergence up to seq pos 63 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 97 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:2:59:18912:18239 base [63] ends at position  [97] within node: 451 totaling 0 mismatches. 
-reached end of vertex: 451, exploring next vertices for continued path extension: [981]
Pursuing extension from : GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1) to successors: [GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)]
Exploring extension from node: 451 to node: 981
updatePathRecursively(readName=r261DFRAAXX100204:2:59:18912:18239, locInSeq: 63 / 75, locInNode: 23 / 46, totalNumMm: 0

trying to continue the mapping to node GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:59:18912:18239)
GAGCACTCTGAAC 63
To VERTEX (GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)) SEQ:
GAGCACTCTGAAC 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 36 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:2:59:18912:18239 with length: 76 and base [76] ends at position  [36] within node: 981 totaling 0 mismatches. 
r261DFRAAXX100204:2:59:18912:18239 best path so far from vertex: 451 to : 981 = [981], with total mm: 0
Done with exploring paths from vertex: 451
Paths and scores found are: 
	explored path: [981] w/ mm: 0
	AND best selected was: [981] w/ mm: 0
FINAL BEST PATH for r261DFRAAXX100204:2:59:18912:18239 is [451, 981] with total mm: 0
Read r261DFRAAXX100204:2:59:18912:18239 seq CAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAAC threaded as: PATH_N_MM_COUNT: mismatches=0, path= [451, 981] positions:  [451,nodeEnd:97,readEnd:63] [981,nodeEnd:36,readEnd:76] , trimmed to: [451, 981]
Threaded Read as: r261DFRAAXX100204:2:59:18912:18239 : [451, 981]
ReadPath@Init: r261DFRAAXX100204:2:59:18912:18239 : [451, 981]

mapped read [42]Read: >r261DFRAAXX100204:2:59:18912:18239/2	0	612	51	663		AGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGAC	-
Read: r261DFRAAXX100204:2:59:18912:18239 has start: 0, end: 75 and sequence: AGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGAC
after extracting substring: AGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGAC
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 63


Threading read: r261DFRAAXX100204:2:59:18912:18239, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:2:59:18912:18239 sequence is:
AGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGAC
updatePathRecursively(readName=r261DFRAAXX100204:2:59:18912:18239, locInSeq: 0 / 75, locInNode: 63 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:59:18912:18239)
AGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGAC 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
AGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGAC 63
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 139 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:2:59:18912:18239 with length: 76 and base [76] ends at position  [139] within node: 549 totaling 0 mismatches. 
FINAL BEST PATH for r261DFRAAXX100204:2:59:18912:18239 is [549] with total mm: 0
Read r261DFRAAXX100204:2:59:18912:18239 seq AGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGAC threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549] positions:  [549,nodeEnd:139,readEnd:76] , trimmed to: [549]
Threaded Read as: r261DFRAAXX100204:2:59:18912:18239 : [549]
ReadPath@Init: r261DFRAAXX100204:2:59:18912:18239 : [549]

mapped read [43]Read: >r261DFRAAXX100204:2:61:13619:6070/2	0	786	51	741		GCTAGGGGAAATAGGGGAGCTCCAAACCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCC	-
Read: r261DFRAAXX100204:2:61:13619:6070 has start: 0, end: 75 and sequence: GCTAGGGGAAATAGGGGAGCTCCAAACCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCC
after extracting substring: GCTAGGGGAAATAGGGGAGCTCCAAACCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCC
findPathInGraph: V:786, with seq: GCTAGGGGAAATAGGGGAGCTCCAAACCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 786 at position: 0


Threading read: r261DFRAAXX100204:2:61:13619:6070, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:2:61:13619:6070 sequence is:
GCTAGGGGAAATAGGGGAGCTCCAAACCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCC
updatePathRecursively(readName=r261DFRAAXX100204:2:61:13619:6070, locInSeq: 0 / 75, locInNode: 0 / 49, totalNumMm: 0

trying to continue the mapping to node GCTAGGGGAA...GGGAGCCACC:W1(V786_D0)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:61:13619:6070)
GCTAGGGGAAATAGGGGAGCTCCAAACCCAGCCCCGTGGAGGGAGCCACC 0
To VERTEX (GCTAGGGGAA...GGGAGCCACC:W1(V786_D0)) SEQ:
GCTAGGGGAAATAGGGGAGCTCCAAACCCAGCCCCGTGGAGGGAGCCACC 0
zipper alignment mm: 0
alignment divergence up to seq pos 50 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 50 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:2:61:13619:6070 base [50] ends at position  [50] within node: 786 totaling 0 mismatches. 
-reached end of vertex: 786, exploring next vertices for continued path extension: [717]
Pursuing extension from : GCTAGGGGAA...GGGAGCCACC:W1(V786_D0) to successors: [AGCCACAGGT...CTTCCTGTGA:W5(V717_D1)]
Exploring extension from node: 786 to node: 717
updatePathRecursively(readName=r261DFRAAXX100204:2:61:13619:6070, locInSeq: 50 / 75, locInNode: 23 / 64, totalNumMm: 0

trying to continue the mapping to node AGCCACAGGT...CTTCCTGTGA:W5(V717_D1)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:61:13619:6070)
AGCCACAGGTACCTGATGGAAATGCC 50
To VERTEX (AGCCACAGGT...CTTCCTGTGA:W5(V717_D1)) SEQ:
AGCCACAGGTACCTGATGGAAATGCC 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 49 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:2:61:13619:6070 with length: 76 and base [76] ends at position  [49] within node: 717 totaling 0 mismatches. 
r261DFRAAXX100204:2:61:13619:6070 best path so far from vertex: 786 to : 717 = [717], with total mm: 0
Done with exploring paths from vertex: 786
Paths and scores found are: 
	explored path: [717] w/ mm: 0
	AND best selected was: [717] w/ mm: 0
FINAL BEST PATH for r261DFRAAXX100204:2:61:13619:6070 is [786, 717] with total mm: 0
Read r261DFRAAXX100204:2:61:13619:6070 seq GCTAGGGGAAATAGGGGAGCTCCAAACCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCC threaded as: PATH_N_MM_COUNT: mismatches=0, path= [786, 717] positions:  [786,nodeEnd:50,readEnd:50] [717,nodeEnd:49,readEnd:76] , trimmed to: [786, 717]
Threaded Read as: r261DFRAAXX100204:2:61:13619:6070 : [786, 717]
ReadPath@Init: r261DFRAAXX100204:2:61:13619:6070 : [786, 717]

mapped read [44]Read: >r261DFRAAXX100204:2:64:15138:21125/1	0	706	51	757		GAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCACTTCCTGTGA	-
Read: r261DFRAAXX100204:2:64:15138:21125 has start: 0, end: 75 and sequence: GAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCACTTCCTGTGA
after extracting substring: GAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCACTTCCTGTGA
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 157


Threading read: r261DFRAAXX100204:2:64:15138:21125, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:2:64:15138:21125 sequence is:
GAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCACTTCCTGTGA
updatePathRecursively(readName=r261DFRAAXX100204:2:64:15138:21125, locInSeq: 0 / 75, locInNode: 157 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:64:15138:21125)
GAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
GAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC 157
zipper alignment mm: 0
alignment divergence up to seq pos 34 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 191 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:2:64:15138:21125 base [34] ends at position  [191] within node: 549 totaling 0 mismatches. 
-reached end of vertex: 549, exploring next vertices for continued path extension: [717]
Pursuing extension from : AGTCCACCAC...GGGAGCCACC:W6(V549_D3) to successors: [AGCCACAGGT...CTTCCTGTGA:W5(V717_D1)]
Exploring extension from node: 549 to node: 717
updatePathRecursively(readName=r261DFRAAXX100204:2:64:15138:21125, locInSeq: 34 / 75, locInNode: 23 / 64, totalNumMm: 0

trying to continue the mapping to node AGCCACAGGT...CTTCCTGTGA:W5(V717_D1)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:64:15138:21125)
AGCCACAGGTACCTGATGGAAATGCCGGCTCACTTCCTGTGA 34
To VERTEX (AGCCACAGGT...CTTCCTGTGA:W5(V717_D1)) SEQ:
AGCCACAGGTACCTGATGGAAATGCCGGCTCACTTCCTGTGA 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 65 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:2:64:15138:21125 with length: 76 and base [76] ends at position  [65] within node: 717 totaling 0 mismatches. 
r261DFRAAXX100204:2:64:15138:21125 best path so far from vertex: 549 to : 717 = [717], with total mm: 0
Done with exploring paths from vertex: 549
Paths and scores found are: 
	explored path: [717] w/ mm: 0
	AND best selected was: [717] w/ mm: 0
FINAL BEST PATH for r261DFRAAXX100204:2:64:15138:21125 is [549, 717] with total mm: 0
Read r261DFRAAXX100204:2:64:15138:21125 seq GAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCACTTCCTGTGA threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549, 717] positions:  [549,nodeEnd:191,readEnd:34] [717,nodeEnd:65,readEnd:76] , trimmed to: [549, 717]
Threaded Read as: r261DFRAAXX100204:2:64:15138:21125 : [549, 717]
ReadPath@Init: r261DFRAAXX100204:2:64:15138:21125 : [549, 717]

mapped read [45]Read: >r261DFRAAXX100204:2:75:16853:12097/1	0	507	51	558		GGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACC	-
Read: r261DFRAAXX100204:2:75:16853:12097 has start: 0, end: 75 and sequence: GGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACC
after extracting substring: GGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACC
findPathInGraph: V:451, with seq: GAAGAAATCTTTCTTTCCAAGTAGTGTCTTAACTCAGGAGATCATGGTAGGGAAGGGGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT
trying to start the mapping to node 451 at position: 56


Threading read: r261DFRAAXX100204:2:75:16853:12097, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:2:75:16853:12097 sequence is:
GGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACC
updatePathRecursively(readName=r261DFRAAXX100204:2:75:16853:12097, locInSeq: 0 / 75, locInNode: 56 / 96, totalNumMm: 0

trying to continue the mapping to node GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:75:16853:12097)
GGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 0
To VERTEX (GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1)) SEQ:
GGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCT 56
zipper alignment mm: 0
alignment divergence up to seq pos 41 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 97 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:2:75:16853:12097 base [41] ends at position  [97] within node: 451 totaling 0 mismatches. 
-reached end of vertex: 451, exploring next vertices for continued path extension: [981]
Pursuing extension from : GTGTCTTAAC...GAAGCTCCCT:W6(V451_D1) to successors: [GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)]
Exploring extension from node: 451 to node: 981
updatePathRecursively(readName=r261DFRAAXX100204:2:75:16853:12097, locInSeq: 41 / 75, locInNode: 23 / 46, totalNumMm: 0

trying to continue the mapping to node GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:75:16853:12097)
GAGCACTCTGAACCCTGTGAGGCA 41
To VERTEX (GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1)) SEQ:
GAGCACTCTGAACCCTGTGAGGCA 23
zipper alignment mm: 0
alignment divergence up to seq pos 65 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 47 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:2:75:16853:12097 base [65] ends at position  [47] within node: 981 totaling 0 mismatches. 
-reached end of vertex: 981, exploring next vertices for continued path extension: [549]
Pursuing extension from : GAGCACTCTGAACCCTGTGAGGCA:W6(V981_D-1) to successors: [AGTCCACCAC...GGGAGCCACC:W6(V549_D3)]
Exploring extension from node: 981 to node: 549
updatePathRecursively(readName=r261DFRAAXX100204:2:75:16853:12097, locInSeq: 65 / 75, locInNode: 23 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:75:16853:12097)
AGTCCACCACC 65
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
AGTCCACCACC 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 34 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:2:75:16853:12097 with length: 76 and base [76] ends at position  [34] within node: 549 totaling 0 mismatches. 
r261DFRAAXX100204:2:75:16853:12097 best path so far from vertex: 981 to : 549 = [549], with total mm: 0
Done with exploring paths from vertex: 981
Paths and scores found are: 
	explored path: [549] w/ mm: 0
	AND best selected was: [549] w/ mm: 0
r261DFRAAXX100204:2:75:16853:12097 best path so far from vertex: 451 to : 981 = [981, 549], with total mm: 0
Done with exploring paths from vertex: 451
Paths and scores found are: 
	explored path: [981, 549] w/ mm: 0
	AND best selected was: [981, 549] w/ mm: 0
FINAL BEST PATH for r261DFRAAXX100204:2:75:16853:12097 is [451, 981, 549] with total mm: 0
Read r261DFRAAXX100204:2:75:16853:12097 seq GGTCAGGCCACTTCACAAGGAGCAGAGTTAGGAAGCTCCCTGAGCACTCTGAACCCTGTGAGGCAAGTCCACCACC threaded as: PATH_N_MM_COUNT: mismatches=0, path= [451, 981, 549] positions:  [451,nodeEnd:97,readEnd:41] [981,nodeEnd:47,readEnd:65] [549,nodeEnd:34,readEnd:76] , trimmed to: [451, 981, 549]
Threaded Read as: r261DFRAAXX100204:2:75:16853:12097 : [451, 981, 549]
ReadPath@Init: r261DFRAAXX100204:2:75:16853:12097 : [451, 981, 549]

mapped read [46]Read: >r261DFRAAXX100204:2:90:12533:11254/1	0	696	51	747		GGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCA	-
Read: r261DFRAAXX100204:2:90:12533:11254 has start: 0, end: 75 and sequence: GGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCA
after extracting substring: GGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCA
findPathInGraph: V:549, with seq: AGCACTCTGAACCCTGTGAGGCAAGTCCACCACCAGCGTATCTAGACCCAGGCCATCTAATAAAGGAAAACTGCATCTTTGCCCACATGATGCTTGGTTAAGACAAGGGGTTAGTGACAAAGTAAAGAGGATGACAGACTCTCTAAGGGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC
trying to start the mapping to node 549 at position: 147


Threading read: r261DFRAAXX100204:2:90:12533:11254, length: 76, allowing for 4 max mismatches.
Read: r261DFRAAXX100204:2:90:12533:11254 sequence is:
GGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCA
updatePathRecursively(readName=r261DFRAAXX100204:2:90:12533:11254, locInSeq: 0 / 75, locInNode: 147 / 190, totalNumMm: 0

trying to continue the mapping to node AGTCCACCAC...GGGAGCCACC:W6(V549_D3)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:90:12533:11254)
GGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC 0
To VERTEX (AGTCCACCAC...GGGAGCCACC:W6(V549_D3)) SEQ:
GGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACC 147
zipper alignment mm: 0
alignment divergence up to seq pos 44 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 191 = 0.0
Reached end of node sequence.  Readr261DFRAAXX100204:2:90:12533:11254 base [44] ends at position  [191] within node: 549 totaling 0 mismatches. 
-reached end of vertex: 549, exploring next vertices for continued path extension: [717]
Pursuing extension from : AGTCCACCAC...GGGAGCCACC:W6(V549_D3) to successors: [AGCCACAGGT...CTTCCTGTGA:W5(V717_D1)]
Exploring extension from node: 549 to node: 717
updatePathRecursively(readName=r261DFRAAXX100204:2:90:12533:11254, locInSeq: 44 / 75, locInNode: 23 / 64, totalNumMm: 0

trying to continue the mapping to node AGCCACAGGT...CTTCCTGTGA:W5(V717_D1)
-ALIGNING READ SEQ (r261DFRAAXX100204:2:90:12533:11254)
AGCCACAGGTACCTGATGGAAATGCCGGCTCA 44
To VERTEX (AGCCACAGGT...CTTCCTGTGA:W5(V717_D1)) SEQ:
AGCCACAGGTACCTGATGGAAATGCCGGCTCA 23
zipper alignment mm: 0
alignment divergence up to seq pos 76 = mm: 0, div:0.0
local vertex alignment divergence = 0 / 55 = 0.0
Reached end of read sequence.  Readr261DFRAAXX100204:2:90:12533:11254 with length: 76 and base [76] ends at position  [55] within node: 717 totaling 0 mismatches. 
r261DFRAAXX100204:2:90:12533:11254 best path so far from vertex: 549 to : 717 = [717], with total mm: 0
Done with exploring paths from vertex: 549
Paths and scores found are: 
	explored path: [717] w/ mm: 0
	AND best selected was: [717] w/ mm: 0
FINAL BEST PATH for r261DFRAAXX100204:2:90:12533:11254 is [549, 717] with total mm: 0
Read r261DFRAAXX100204:2:90:12533:11254 seq GGACATATGGGAGCTACATAGCCAGCCCCGTGGAGGGAGCCACCAGCCACAGGTACCTGATGGAAATGCCGGCTCA threaded as: PATH_N_MM_COUNT: mismatches=0, path= [549, 717] positions:  [549,nodeEnd:191,readEnd:44] [717,nodeEnd:55,readEnd:76] , trimmed to: [549, 717]
Threaded Read as: r261DFRAAXX100204:2:90:12533:11254 : [549, 717]
ReadPath@Init: r261DFRAAXX100204:2:90:12533:11254 : [549, 717]
number of reads threaded = 46 (from total of 46) which came from 42 pairs
Read name to pairing info: r261DFRAAXX100204:2:47:8841:7694 => [451, 981, 549]
Read name to pairing info: r261DFRAAXX100204:1:67:9991:2232 => [380, 982, 440, 451]
Read name to pairing info: 61DFRAAXX100204:2:27:5714:7307 => [549]
Read name to pairing info: r261DFRAAXX100204:2:27:5714:7307 => [549]
Read name to pairing info: 61DFRAAXX100204:1:70:1041:1268 => [549]
Read name to pairing info: 61DFRAAXX100204:1:113:7690:4285 => [981, 549]
Read name to pairing info: 61DFRAAXX100204:1:67:9991:2232 => [380, 982, 440, 451]
Read name to pairing info: r261DFRAAXX100204:1:113:7690:4285 => [981, 549]
Read name to pairing info: 61DFRAAXX100204:2:43:2649:2845 => [945, 451]
Read name to pairing info: r261DFRAAXX100204:1:112:16960:13532 => [549]
Read name to pairing info: r261DFRAAXX100204:2:13:7749:17373 => [380, 982, 440, 451]
Read name to pairing info: 61DFRAAXX100204:2:90:12533:11254 => [549, 717]
Read name to pairing info: 61DFRAAXX100204:1:20:5538:6890 => [549]
Read name to pairing info: r261DFRAAXX100204:2:61:13619:6070 => [786, 717]
Read name to pairing info: r261DFRAAXX100204:1:20:5538:6890 => [549]
Read name to pairing info: 61DFRAAXX100204:1:112:16960:13532 => [549]
Read name to pairing info: 61DFRAAXX100204:2:61:13619:6070 => [786, 717]
Read name to pairing info: r261DFRAAXX100204:2:34:11574:10433 => [982, 440, 451]
Read name to pairing info: 61DFRAAXX100204:2:13:7749:17373 => [380, 982, 440, 451]
Read name to pairing info: r261DFRAAXX100204:2:90:12533:11254 => [549, 717]
Read name to pairing info: 61DFRAAXX100204:2:47:8841:7694 => [451, 981, 549]
Read name to pairing info: 61DFRAAXX100204:1:115:8211:5116 => [451, 981]
Read name to pairing info: 61DFRAAXX100204:2:34:11574:10433 => [982, 440, 451]
Read name to pairing info: r261DFRAAXX100204:1:85:13720:15251 => [549]
Read name to pairing info: r261DFRAAXX100204:1:39:8793:18196 => [380, 982][451, 981, 549]
Read name to pairing info: 61DFRAAXX100204:2:33:12784:13782 => [549]
Read name to pairing info: 61DFRAAXX100204:2:47:12270:6103 => [549]
Read name to pairing info: 61DFRAAXX100204:1:39:8793:18196 => [380, 982][451, 981, 549]
Read name to pairing info: r261DFRAAXX100204:2:75:16853:12097 => [451, 981, 549]
Read name to pairing info: r261DFRAAXX100204:2:59:18912:18239 => [451, 981][549]
Read name to pairing info: 61DFRAAXX100204:1:85:13720:15251 => [549]
Read name to pairing info: r261DFRAAXX100204:2:47:12270:6103 => [549]
Read name to pairing info: r261DFRAAXX100204:2:33:12784:13782 => [549]
Read name to pairing info: r261DFRAAXX100204:2:64:15138:21125 => [549, 717]
Read name to pairing info: r261DFRAAXX100204:2:18:10392:2962 => [380, 982, 440, 451]
Read name to pairing info: 61DFRAAXX100204:2:59:18912:18239 => [451, 981][549]
Read name to pairing info: 61DFRAAXX100204:2:18:10392:2962 => [380, 982, 440, 451]
Read name to pairing info: 61DFRAAXX100204:2:64:15138:21125 => [549, 717]
Read name to pairing info: r261DFRAAXX100204:2:43:2649:2845 => [945, 451]
Read name to pairing info: r261DFRAAXX100204:1:115:8211:5116 => [451, 981]
Read name to pairing info: 61DFRAAXX100204:2:75:16853:12097 => [451, 981, 549]
Read name to pairing info: r261DFRAAXX100204:1:70:1041:1268 => [549]

SECTION
==================
Pairing up the reads into PairPaths
===========================

we have 1 reads supporting the path: PairPath [_paths=[[451, 981, 549], []]]
we have 1 reads supporting the path: PairPath [_paths=[[380, 982, 440, 451], []]]
we have 1 reads supporting the path: PairPath [_paths=[[549], []]]
we have 2 reads supporting the path: PairPath [_paths=[[549], []]]
we have 3 reads supporting the path: PairPath [_paths=[[549], []]]
we have 1 reads supporting the path: PairPath [_paths=[[981, 549], []]]
we have 2 reads supporting the path: PairPath [_paths=[[380, 982, 440, 451], []]]
we have 2 reads supporting the path: PairPath [_paths=[[981, 549], []]]
we have 1 reads supporting the path: PairPath [_paths=[[945, 451], []]]
we have 4 reads supporting the path: PairPath [_paths=[[549], []]]
we have 3 reads supporting the path: PairPath [_paths=[[380, 982, 440, 451], []]]
we have 1 reads supporting the path: PairPath [_paths=[[549, 717], []]]
we have 5 reads supporting the path: PairPath [_paths=[[549], []]]
we have 1 reads supporting the path: PairPath [_paths=[[786, 717], []]]
we have 6 reads supporting the path: PairPath [_paths=[[549], []]]
we have 7 reads supporting the path: PairPath [_paths=[[549], []]]
we have 2 reads supporting the path: PairPath [_paths=[[786, 717], []]]
we have 1 reads supporting the path: PairPath [_paths=[[982, 440, 451], []]]
we have 4 reads supporting the path: PairPath [_paths=[[380, 982, 440, 451], []]]
we have 2 reads supporting the path: PairPath [_paths=[[549, 717], []]]
we have 2 reads supporting the path: PairPath [_paths=[[451, 981, 549], []]]
we have 1 reads supporting the path: PairPath [_paths=[[451, 981], []]]
we have 2 reads supporting the path: PairPath [_paths=[[982, 440, 451], []]]
we have 8 reads supporting the path: PairPath [_paths=[[549], []]]
we have 1 reads supporting the path: PairPath [_paths=[[380, 982], [451, 981, 549]]]
we have 9 reads supporting the path: PairPath [_paths=[[549], []]]
we have 10 reads supporting the path: PairPath [_paths=[[549], []]]
we have 2 reads supporting the path: PairPath [_paths=[[380, 982], [451, 981, 549]]]
we have 3 reads supporting the path: PairPath [_paths=[[451, 981, 549], []]]
we have 1 reads supporting the path: PairPath [_paths=[[451, 981], [549]]]
we have 11 reads supporting the path: PairPath [_paths=[[549], []]]
we have 12 reads supporting the path: PairPath [_paths=[[549], []]]
we have 13 reads supporting the path: PairPath [_paths=[[549], []]]
we have 3 reads supporting the path: PairPath [_paths=[[549, 717], []]]
we have 5 reads supporting the path: PairPath [_paths=[[380, 982, 440, 451], []]]
we have 2 reads supporting the path: PairPath [_paths=[[451, 981], [549]]]
we have 6 reads supporting the path: PairPath [_paths=[[380, 982, 440, 451], []]]
we have 4 reads supporting the path: PairPath [_paths=[[549, 717], []]]
we have 2 reads supporting the path: PairPath [_paths=[[945, 451], []]]
we have 2 reads supporting the path: PairPath [_paths=[[451, 981], []]]
we have 4 reads supporting the path: PairPath [_paths=[[451, 981, 549], []]]
we have 14 reads supporting the path: PairPath [_paths=[[549], []]]
number of reads used = 42
## Read PathPair results: 38 singletons,  num pairs: 4, num pairs discarded: 0
Printing Pair Paths  Before DAG Overlap Layout ------------------
Start Vertex:945
PairPaths@Init: PairPath [_paths=[[945, 451], []]]=2
Start Vertex:786
PairPaths@Init: PairPath [_paths=[[786, 717], []]]=2
Start Vertex:451
PairPaths@Init: PairPath [_paths=[[451, 981, 549], []]]=4
PairPaths@Init: PairPath [_paths=[[451, 981], [549]]]=2
PairPaths@Init: PairPath [_paths=[[451, 981], []]]=2
Start Vertex:549
PairPaths@Init: PairPath [_paths=[[549, 717], []]]=4
PairPaths@Init: PairPath [_paths=[[549], []]]=14
Start Vertex:981
PairPaths@Init: PairPath [_paths=[[981, 549], []]]=2
Start Vertex:982
PairPaths@Init: PairPath [_paths=[[982, 440, 451], []]]=2
Start Vertex:380
PairPaths@Init: PairPath [_paths=[[380, 982], [451, 981, 549]]]=2
PairPaths@Init: PairPath [_paths=[[380, 982, 440, 451], []]]=6
SECTION
========  Create DAG from Overlap Layout ============


Noncontained paths: [[380, 982, 440, 451], [451, 981, 549], [786, 717], [549, 717], [945, 451]]
Node[451] has repeat count: 3
Node[549] has repeat count: 2
Node[717] has repeat count: 2
Node[945] has repeat count: 1
Node[786] has repeat count: 1
Node[981] has repeat count: 1
Node[982] has repeat count: 1
Node[440] has repeat count: 1
Node[380] has repeat count: 1
path PN1::[380, 982, 440, 451] extends no path
PathNode Overlap Detected: [overlap:  1] PN1::[380, 982, 440, 451] extended by PN2::[451, 981, 549]
PathNode Overlap Detected: [overlap:  1] PN5::[945, 451] extended by PN2::[451, 981, 549]
extension of: PN1::[380, 982, 440, 451] by PN2::[451, 981, 549] has 1 terminal matches.
extension of: PN5::[945, 451] by PN2::[451, 981, 549] has 1 terminal matches.
path PN3::[786, 717] extends no path
PathNode Overlap Detected: [overlap:  1] PN2::[451, 981, 549] extended by PN4::[549, 717]
extension of: PN2::[451, 981, 549] by PN4::[549, 717] has 1 terminal matches.
path PN5::[945, 451] extends no path
PathNodeDescription: PN2::[451, 981, 549]
PathNodeDescription: PN3::[786, 717]
PathNodeDescription: PN1::[380, 982, 440, 451]
PathNodeDescription: PN4::[549, 717]
PathNodeDescription: PN5::[945, 451]
// Breaking cycles in Path Overlap Graph (POG), Round: 1
SECTION
========  Convert Path-DAG to SeqVertex-DAG ============


prep_for_DAG_collapse: PN2 CurrVert:[983, 984, 985], OrigVert:[451, 981, 549]
prep_for_DAG_collapse: PN3 CurrVert:[986, 987], OrigVert:[786, 717]
prep_for_DAG_collapse: PN1 CurrVert:[988, 989, 990, 991], OrigVert:[380, 982, 440, 451]
prep_for_DAG_collapse: PN4 CurrVert:[992, 993], OrigVert:[549, 717]
prep_for_DAG_collapse: PN5 CurrVert:[994, 995], OrigVert:[945, 451]

DFS_path_to_graph: targeting: PN3::[786, 717]

DFS_path_to_graph: targeting: PN1::[380, 982, 440, 451]

DFS_path_to_graph: targeting: PN2::[451, 981, 549]

DFS_path_to_graph: targeting: PN4::[549, 717]

DFS_path_to_graph: targeting: PN5::[945, 451]


## Round: 1 Zipping up.
## zip_up()
attempt_zip_merge_SeqVertices([AGCACTCTGA...GGGAGCCACC:W6(V992_549_D0), AGTCCACCAC...GGGAGCCACC:W6(V985_549_D11)])
	parent_depths[10], child_depths: [12, 12]
UpZipMerging nodes: [AGCACTCTGA...GGGAGCCACC:W6(V992_549_D0), AGCACTCTGA...GGGAGCCACC:W6(V985_549_D11)] to AGTCCACCAC...GGGAGCCACC:W6(V996_549_D0)
Zip up merged: 2 nodes.


## Round: 2 Zipping up.
## zip_up()
attempt_zip_merge_SeqVertices([GTGTCTTAAC...GAAGCTCCCT:W6(V995_451_D4), GAAGAAATCT...GAAGCTCCCT:W6(V983_451_D1), GTGTCTTAAC...GAAGCTCCCT:W6(V991_451_D8)])
	parent_depths[0, 7], child_depths: [9, 9, 9]
UpZipMerging nodes: [GAAGAAATCT...GAAGCTCCCT:W6(V995_451_D4), GAAGAAATCT...GAAGCTCCCT:W6(V983_451_D1), GAAGAAATCT...GAAGCTCCCT:W6(V991_451_D8)] to GTGTCTTAAC...GAAGCTCCCT:W6(V997_451_D1)
Zip up merged: 3 nodes.


## Round: 3 Zipping up.
## zip_up()
Zip up merged: 0 nodes.


## Round: 4 Zipping down.
Zip down merged: 0 nodes.


## Round: 5 Zipping up.
## zip_up()
Zip up merged: 0 nodes.


## Round: 6 Zipping down.
Zip down merged: 0 nodes.
destroy_unzipped_duplicates_above()
Old_to_new_vertex_id_mapping: 994 => 994 (stays same)
Old_to_new_vertex_id_mapping: 986 => 986 (stays same)
Old_to_new_vertex_id_mapping: 988 => 988 (stays same)
Old_to_new_vertex_id_mapping: 987 => 987 (stays same)
Old_to_new_vertex_id_mapping: 989 => 989 (stays same)
Old_to_new_vertex_id_mapping: 990 => 990 (stays same)
Old_to_new_vertex_id_mapping: 995 => 997
Old_to_new_vertex_id_mapping: 983 => 997
Old_to_new_vertex_id_mapping: 991 => 997
Old_to_new_vertex_id_mapping: 984 => 984 (stays same)
Old_to_new_vertex_id_mapping: 992 => 996
Old_to_new_vertex_id_mapping: 985 => 996
Old_to_new_vertex_id_mapping: 993 => 993 (stays same)
Old-to-new-path mappings: {[945, 451]=[994, 997], [451, 981, 549]=[997, 984, 996], [549, 717]=[996, 993], [786, 717]=[986, 987], [380, 982, 440, 451]=[988, 989, 990, 997]}
update_PairPaths_using_overlapDAG_refined_paths: orig_pp: PairPath [_paths=[[945, 451], []]] has support: 2
update_PairPaths_using_overlapDAG_refined_paths: orig_pp: PairPath [_paths=[[549, 717], []]] has support: 4
update_PairPaths_using_overlapDAG_refined_paths: orig_pp: PairPath [_paths=[[982, 440, 451], []]] has support: 2
update_PairPaths_using_overlapDAG_refined_paths, p1: [982, 440, 451] mapped to: [[989, 990, 997]]
update_PairPaths_using_overlapDAG_refined_paths: orig_pp: PairPath [_paths=[[451, 981, 549], []]] has support: 4
update_PairPaths_using_overlapDAG_refined_paths: orig_pp: PairPath [_paths=[[451, 981], [549]]] has support: 2
update_PairPaths_using_overlapDAG_refined_paths, p1: [451, 981] mapped to: [[997, 984]]
update_PairPaths_using_overlapDAG_refined_paths: orig_pp: PairPath [_paths=[[786, 717], []]] has support: 2
update_PairPaths_using_overlapDAG_refined_paths: orig_pp: PairPath [_paths=[[451, 981], []]] has support: 2
update_PairPaths_using_overlapDAG_refined_paths, p1: [451, 981] mapped to: [[997, 984]]
update_PairPaths_using_overlapDAG_refined_paths: orig_pp: PairPath [_paths=[[380, 982], [451, 981, 549]]] has support: 2
update_PairPaths_using_overlapDAG_refined_paths, p1: [380, 982] mapped to: [[988, 989]]
update_PairPaths_using_overlapDAG_refined_paths: orig_pp: PairPath [_paths=[[549], []]] has support: 14
update_PairPaths_using_overlapDAG_refined_paths, p1: [549] mapped to: [[996]]
update_PairPaths_using_overlapDAG_refined_paths: orig_pp: PairPath [_paths=[[981, 549], []]] has support: 2
update_PairPaths_using_overlapDAG_refined_paths, p1: [981, 549] mapped to: [[984, 996]]
update_PairPaths_using_overlapDAG_refined_paths: orig_pp: PairPath [_paths=[[380, 982, 440, 451], []]] has support: 6
Printing Pair Paths ------------------
Start Vertex:994
PairPaths@PostOverlapLayout: PairPath [_paths=[[994, 997], []]]=2
Start Vertex:996
PairPaths@PostOverlapLayout: PairPath [_paths=[[996, 993], []]]=4
PairPaths@PostOverlapLayout: PairPath [_paths=[[996], []]]=14
Start Vertex:997
PairPaths@PostOverlapLayout: PairPath [_paths=[[997, 984], [996]]]=2
PairPaths@PostOverlapLayout: PairPath [_paths=[[997, 984], []]]=2
PairPaths@PostOverlapLayout: PairPath [_paths=[[997, 984, 996], []]]=4
Start Vertex:984
PairPaths@PostOverlapLayout: PairPath [_paths=[[984, 996], []]]=2
Start Vertex:986
PairPaths@PostOverlapLayout: PairPath [_paths=[[986, 987], []]]=2
Start Vertex:988
PairPaths@PostOverlapLayout: PairPath [_paths=[[988, 989], [997, 984, 996]]]=2
PairPaths@PostOverlapLayout: PairPath [_paths=[[988, 989, 990, 997], []]]=6
Start Vertex:989
PairPaths@PostOverlapLayout: PairPath [_paths=[[989, 990, 997], []]]=2
SECTION
======= Reorganize Read Pairings =========


NODE_DESCR: AGCCACAGGT...CTTCCTGTGA:W5(V993_717_D4) Preds: [AGTCCACCAC...GGGAGCCACC:W6(V996_549_D3) ] Succ: []
NODE_DESCR: AGAATACAAA...TTTCCAAGTA:W1(V994_945_D0) Preds: [] Succ: [GTGTCTTAAC...GAAGCTCCCT:W6(V997_451_D1) ]
NODE_DESCR: AGTCCACCAC...GGGAGCCACC:W6(V996_549_D3) Preds: [GAGCACTCTGAACCCTGTGAGGCA:W6(V984_981_D2) ] Succ: [AGCCACAGGT...CTTCCTGTGA:W5(V993_717_D4) ]
NODE_DESCR: GTGTCTTAAC...GAAGCTCCCT:W6(V997_451_D1) Preds: [AGAATACAAA...TTTCCAAGTA:W1(V994_945_D0) CTTTCCAAGTA:W8(V990_440_D2) ] Succ: [GAGCACTCTGAACCCTGTGAGGCA:W6(V984_981_D2) ]
NODE_DESCR: GAGCACTCTGAACCCTGTGAGGCA:W6(V984_981_D2) Preds: [GTGTCTTAAC...GAAGCTCCCT:W6(V997_451_D1) ] Succ: [AGTCCACCAC...GGGAGCCACC:W6(V996_549_D3) ]
NODE_DESCR: GCTAGGGGAA...GGGAGCCACC:W1(V986_786_D0) Preds: [] Succ: [AGCCACAGGT...CTTCCTGTGA:W5(V987_717_D1) ]
NODE_DESCR: AGCCACAGGT...CTTCCTGTGA:W5(V987_717_D1) Preds: [GCTAGGGGAA...GGGAGCCACC:W1(V986_786_D0) ] Succ: []
NODE_DESCR: GGCCACACGA...CTTCCTCAAG:W2(V988_380_D0) Preds: [] Succ: [CCTCATCAGCAAGAAGAAATCTTT:W7(V989_982_D1) ]
NODE_DESCR: CCTCATCAGCAAGAAGAAATCTTT:W7(V989_982_D1) Preds: [GGCCACACGA...CTTCCTCAAG:W2(V988_380_D0) ] Succ: [CTTTCCAAGTA:W8(V990_440_D2) ]
NODE_DESCR: CTTTCCAAGTA:W8(V990_440_D2) Preds: [CCTCATCAGCAAGAAGAAATCTTT:W7(V989_982_D1) ] Succ: [GTGTCTTAAC...GAAGCTCCCT:W6(V997_451_D1) ]
we have 2 reads supporting the path: PairPath [_paths=[[994, 997], []]]
we have 4 reads supporting the path: PairPath [_paths=[[996, 993], []]]
we have 14 reads supporting the path: PairPath [_paths=[[996], []]]
combinePaths: [997, 984], [996]
Examining imputation of path connecting pairpath: PairPath [_paths=[[997, 984], [996]]] nodes 984 to 996
Could Impute path connectingPairPath [_paths=[[997, 984], [996]]] containing intervening nodes: []
we have 2 reads supporting the path: PairPath [_paths=[[997, 984, 996], []]]
OK pp update to new DAG: PairPath [_paths=[[997, 984], [996]]] => PairPath [_paths=[[997, 984, 996], []]]
we have 2 reads supporting the path: PairPath [_paths=[[997, 984], []]]
we have 6 reads supporting the path: PairPath [_paths=[[997, 984, 996], []]]
we have 2 reads supporting the path: PairPath [_paths=[[984, 996], []]]
we have 2 reads supporting the path: PairPath [_paths=[[986, 987], []]]
combinePaths: [988, 989], [997, 984, 996]
Examining imputation of path connecting pairpath: PairPath [_paths=[[988, 989], [997, 984, 996]]] nodes 989 to 997
Could Impute path connectingPairPath [_paths=[[988, 989], [997, 984, 996]]] containing intervening nodes: [990]
we have 2 reads supporting the path: PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]]
OK pp update to new DAG: PairPath [_paths=[[988, 989], [997, 984, 996]]] => PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]]
we have 6 reads supporting the path: PairPath [_paths=[[988, 989, 990, 997], []]]
we have 2 reads supporting the path: PairPath [_paths=[[989, 990, 997], []]]
Start Vertex:994
PairPaths@AfterPairReorganization: PairPath [_paths=[[994, 997], []]]=2
Start Vertex:996
PairPaths@AfterPairReorganization: PairPath [_paths=[[996, 993], []]]=4
PairPaths@AfterPairReorganization: PairPath [_paths=[[996], []]]=14
Start Vertex:997
PairPaths@AfterPairReorganization: PairPath [_paths=[[997, 984], []]]=2
PairPaths@AfterPairReorganization: PairPath [_paths=[[997, 984, 996], []]]=6
Start Vertex:984
PairPaths@AfterPairReorganization: PairPath [_paths=[[984, 996], []]]=2
Start Vertex:986
PairPaths@AfterPairReorganization: PairPath [_paths=[[986, 987], []]]=2
Start Vertex:988
PairPaths@AfterPairReorganization: PairPath [_paths=[[988, 989, 990, 997], []]]=6
PairPaths@AfterPairReorganization: PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]]=2
Start Vertex:989
PairPaths@AfterPairReorganization: PairPath [_paths=[[989, 990, 997], []]]=2

ComponentDivision: 0 contains the following vertices:
node_id: 986
node_id: 987

ComponentDivision: 1 contains the following vertices:
node_id: 993
node_id: 994
node_id: 996
node_id: 997
node_id: 984
node_id: 988
node_id: 989
node_id: 990
total number of components = 2
Searching for kmer set: CCTCATCAGCAAGAAGAAATCTTT -> CTCATCAGCAAGAAGAAATCTTTC
Searching for kmer set: GGAAGAAATCTTTCTTTCCAAGTA -> GAAGAAATCTTTCTTTCCAAGTAG
Searching for kmer set: AGGAGCAGAGTTAGGAAGCTCCCT -> GGAGCAGAGTTAGGAAGCTCCCTG
Searching for kmer set: GCCAGCCCCGTGGAGGGAGCCACC -> CCAGCCCCGTGGAGGGAGCCACCA
Searching for kmer set: TGGCTACAAACAGACTTCCTCAAG -> GGCTACAAACAGACTTCCTCAAGC
Searching for kmer set: GAGCACTCTGAACCCTGTGAGGCA -> AGCACTCTGAACCCTGTGAGGCAA
Searching for kmer set: CCCAGCCCCGTGGAGGGAGCCACC -> CCAGCCCCGTGGAGGGAGCCACCA
Searching for kmer set: AGAAGAAATCTTTCTTTCCAAGTA -> GAAGAAATCTTTCTTTCCAAGTAG

SECTION
============= Begin Assembly ===============


Assembling subcomponent 0
Subcomponent: 0, adding pairpath: PairPath [_paths=[[986, 987], []]]
####  Component Read Summary BEFORE PairPath-per-node Reduction
*****  PairPath Counts *****
componentReadHash, start node: 986 has size: 1
Node: 986 has 1 pairpaths stored:
	PairPath [_paths=[[986, 987], []]] has read support: 2

## Total number of pairpaths: 1
####  Component Read Summary AFTER PairPath-per-node Reduction
*****  PairPath Counts *****
componentReadHash, start node: 986 has size: 1
Node: 986 has 1 pairpaths stored:
	PairPath [_paths=[[986, 987], []]] has read support: 2

## Total number of pairpaths: 1
### Extracting triplets from reads.

### 0 nodes have locked-in triplet paths:
### Extracting complex path prefixes from reads.
-capturing path prefixes
-removing prefixes that are subpaths of other prefixes

#### Extended triplets from reads: 
Adding edge from S to AAACCCAGCCCCGTGGAGGGAGCCACC:W1(V986_786_D0)
Adding edge from AGCCACAGGT...CTTCCTGTGA:W5(V987_717_D1) to T

SECTION
###############
## Starting Butterfly Assembly ##
###################


PairPaths to assemble:
Start Vertex:-1
PairPaths@BflyStart: PairPath [_paths=[[-1, 986], []]]=1
Start Vertex:986
PairPaths@BflyStart: PairPath [_paths=[[986, 987], []]]=2
Start Vertex:987
PairPaths@BflyStart: PairPath [_paths=[[987, -2], []]]=1
QUEUE IS: [:W2147483647(V-1_D-1)]


#### getAllProbablePaths() The next node in the queue C is -1
	butterfly pct done: 1 / 2 = 50.0% pct done.
ReadsStartingAtV_START_BFLY, Node: -1 read: PairPath [_paths=[[-1, 986], []]]
Exploring extension of: 1 paths that end at vertex: -1

== Current Paths Constructed Up To Vertex: -1 :
PathPartialReconstruction@[-1] : [-1]

Adding the reads {PairPath [_paths=[[-1, 986], []]]=1} to the path [-1]


################################################
###### Exploring extension of v: -1 by successor: 986
################################################


Count of paths ending at v: -1 = 1
path_ending_at_v: [-1]


# [PathCounter(986)=0 Examining potential extension of path ending at node V: -1 by successor: 986, via path=[-1]
path [-1] is too short to check for triplet support.
ReadsOfPathUntilV: PATH: [-1]
ReadsOfPathUntiV: READ: PairPath [_paths=[[-1, 986], []]]
-checking if subPath has enough read support. Exploring sub path: [-1, 986]
-readsOfPathUntilV: PairPath [_paths=[[-1, 986], []]]
	-checking if pp: PairPath [_paths=[[-1, 986], []]] supports extension of [-1, 986] => true
examining subPath: [-1, 986] for reinforcement by read: [[-1, 986], []] :true
the read PairPath [_paths=[[-1, 986], []]](1) enforces the sub-path ([-1, 986])
-found: 1 reads supporting subpath.
the sub-path ([-1, 986]) has PASSED

Successful extension of 986 to generate path [-1, 986]
updateReadsOfPath: [-1, 986]
read PairPath [_paths=[[-1, 986], []]] is consistent with 986
pct_contained_propagated: 0.0%
986 was added to the queue
QUEUE IS: [AAACCCAGCCCCGTGGAGGGAGCCACC:W1(V986_786_D0)]


#### getAllProbablePaths() The next node in the queue C is 986
	butterfly pct done: 2 / 2 = 100.0% pct done.
ReadsStartingAtV_START_BFLY, Node: 986 read: PairPath [_paths=[[986, 987], []]]
Exploring extension of: 1 paths that end at vertex: 986

== Current Paths Constructed Up To Vertex: 986 :
PathPartialReconstruction@[986] : [-1, 986]

Adding the reads {PairPath [_paths=[[986, 987], []]]=2} to the path [-1, 986]


################################################
###### Exploring extension of v: 986 by successor: 987
################################################


Count of paths ending at v: 986 = 1
path_ending_at_v: [-1, 986]


# [PathCounter(987)=0 Examining potential extension of path ending at node V: 986 by successor: 987, via path=[-1, 986]
path [-1, 986] is too short to check for triplet support.
ReadsOfPathUntilV: PATH: [-1, 986]
ReadsOfPathUntiV: READ: PairPath [_paths=[[986, 987], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[-1, 986], []]]
-checking if subPath has enough read support. Exploring sub path: [-1, 986, 987]
-readsOfPathUntilV: PairPath [_paths=[[986, 987], []]]
	-checking if pp: PairPath [_paths=[[986, 987], []]] supports extension of [-1, 986, 987] => true
examining subPath: [-1, 986, 987] for reinforcement by read: [[986, 987], []] :true
the read PairPath [_paths=[[986, 987], []]](2) enforces the sub-path ([-1, 986, 987])
-found: 2 reads supporting subpath.
the sub-path ([-1, 986, 987]) has PASSED

Successful extension of 987 to generate path [-1, 986, 987]
updateReadsOfPath: [-1, 986, 987]
read PairPath [_paths=[[986, 987], []]] is consistent with 987
pct_contained_propagated: 50.0%
987 was added to the queue
QUEUE IS: [AGCCACAGGT...CTTCCTGTGA:W5(V987_717_D1)]


#### getAllProbablePaths() The next node in the queue C is 987
	butterfly pct done: 3 / 2 = 150.0% pct done.
ReadsStartingAtV_START_BFLY, Node: 987 read: PairPath [_paths=[[987, -2], []]]
Exploring extension of: 1 paths that end at vertex: 987

== Current Paths Constructed Up To Vertex: 987 :
PathPartialReconstruction@[987] : [-1, 986, 987]

Adding the reads {PairPath [_paths=[[987, -2], []]]=1} to the path [-1, 986, 987]


################################################
###### Exploring extension of v: 987 by successor: -2
################################################


Count of paths ending at v: 987 = 1
path_ending_at_v: [-1, 986, 987]


# [PathCounter(-2)=0 Examining potential extension of path ending at node V: 987 by successor: -2, via path=[-1, 986, 987]
TripletMapper doesnt contain node: 987
ReadsOfPathUntilV: PATH: [-1, 986, 987]
ReadsOfPathUntiV: READ: PairPath [_paths=[[986, 987], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[987, -2], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[-1, 986], []]]
-checking if subPath has enough read support. Exploring sub path: [-1, 986, 987, -2]
-readsOfPathUntilV: PairPath [_paths=[[986, 987], []]]
	-checking if pp: PairPath [_paths=[[986, 987], []]] supports extension of [-1, 986, 987, -2] => false
examining subPath: [-1, 986, 987, -2] for reinforcement by read: [[986, 987], []] :false
the read PairPath [_paths=[[986, 987], []]](2) does not enforce the sub-path ([-1, 986, 987, -2])
-readsOfPathUntilV: PairPath [_paths=[[987, -2], []]]
	-checking if pp: PairPath [_paths=[[987, -2], []]] supports extension of [-1, 986, 987, -2] => false
examining subPath: [-1, 986, 987, -2] for reinforcement by read: [[987, -2], []] :false
the read PairPath [_paths=[[987, -2], []]](1) does not enforce the sub-path ([-1, 986, 987, -2])
-readsOfPathUntilV: PairPath [_paths=[[-1, 986], []]]
	-checking if pp: PairPath [_paths=[[-1, 986], []]] supports extension of [-1, 986, 987, -2] => false
examining subPath: [-1, 986, 987, -2] for reinforcement by read: [[-1, 986], []] :false
the read PairPath [_paths=[[-1, 986], []]](1) does not enforce the sub-path ([-1, 986, 987, -2])
-found: 0 reads supporting subpath.
the sub-path ([-1, 986, 987, -2]) has NOT PASSED

Successful extension of -2 to generate path [-1, 986, 987, -2]
updateReadsOfPath: [-1, 986, 987, -2]
read PairPath [_paths=[[987, -2], []]] is consistent with -2
pct_contained_propagated: 66.66667%
-2 was added to the queue
QUEUE IS: [:W-1(V-2_D-1)]


#### getAllProbablePaths() The next node in the queue C is -2
	butterfly pct done: 4 / 2 = 200.0% pct done.
ReadsStartingAtV_START_BFLY-2 EMPTY
Exploring extension of: 1 paths that end at vertex: -2

== Current Paths Constructed Up To Vertex: -2 :
PathPartialReconstruction@[-2] : [-1, 986, 987, -2]
sequence for path: [-1, 986, 987, -2] is too short: 92
No paths to pursue. Continue...

SECTION
============= Begin Assembly ===============


Assembling subcomponent 1
Subcomponent: 1, adding pairpath: PairPath [_paths=[[994, 997], []]]
Subcomponent: 1, adding pairpath: PairPath [_paths=[[996, 993], []]]
Subcomponent: 1, adding pairpath: PairPath [_paths=[[996], []]]
Subcomponent: 1, adding pairpath: PairPath [_paths=[[997, 984], []]]
Subcomponent: 1, adding pairpath: PairPath [_paths=[[997, 984, 996], []]]
Subcomponent: 1, adding pairpath: PairPath [_paths=[[984, 996], []]]
Subcomponent: 1, adding pairpath: PairPath [_paths=[[988, 989, 990, 997], []]]
Subcomponent: 1, adding pairpath: PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]]
Subcomponent: 1, adding pairpath: PairPath [_paths=[[989, 990, 997], []]]
####  Component Read Summary BEFORE PairPath-per-node Reduction
*****  PairPath Counts *****
componentReadHash, start node: 994 has size: 1
Node: 994 has 1 pairpaths stored:
	PairPath [_paths=[[994, 997], []]] has read support: 2

componentReadHash, start node: 996 has size: 2
Node: 996 has 2 pairpaths stored:
	PairPath [_paths=[[996], []]] has read support: 14
	PairPath [_paths=[[996, 993], []]] has read support: 4

componentReadHash, start node: 997 has size: 2
Node: 997 has 2 pairpaths stored:
	PairPath [_paths=[[997, 984, 996], []]] has read support: 6
	PairPath [_paths=[[997, 984], []]] has read support: 2

componentReadHash, start node: 984 has size: 1
Node: 984 has 1 pairpaths stored:
	PairPath [_paths=[[984, 996], []]] has read support: 2

componentReadHash, start node: 988 has size: 2
Node: 988 has 2 pairpaths stored:
	PairPath [_paths=[[988, 989, 990, 997], []]] has read support: 6
	PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]] has read support: 2

componentReadHash, start node: 989 has size: 1
Node: 989 has 1 pairpaths stored:
	PairPath [_paths=[[989, 990, 997], []]] has read support: 2

## Total number of pairpaths: 9
####  Component Read Summary AFTER PairPath-per-node Reduction
*****  PairPath Counts *****
componentReadHash, start node: 994 has size: 1
Node: 994 has 1 pairpaths stored:
	PairPath [_paths=[[994, 997], []]] has read support: 2

componentReadHash, start node: 996 has size: 2
Node: 996 has 2 pairpaths stored:
	PairPath [_paths=[[996], []]] has read support: 14
	PairPath [_paths=[[996, 993], []]] has read support: 4

componentReadHash, start node: 997 has size: 2
Node: 997 has 2 pairpaths stored:
	PairPath [_paths=[[997, 984, 996], []]] has read support: 6
	PairPath [_paths=[[997, 984], []]] has read support: 2

componentReadHash, start node: 984 has size: 1
Node: 984 has 1 pairpaths stored:
	PairPath [_paths=[[984, 996], []]] has read support: 2

componentReadHash, start node: 988 has size: 2
Node: 988 has 2 pairpaths stored:
	PairPath [_paths=[[988, 989, 990, 997], []]] has read support: 6
	PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]] has read support: 2

componentReadHash, start node: 989 has size: 1
Node: 989 has 1 pairpaths stored:
	PairPath [_paths=[[989, 990, 997], []]] has read support: 2

## Total number of pairpaths: 9
### Extracting triplets from reads.
Setting initial triplet adjacency_path for central node: 984 => [997, 984, 996]
Setting initial triplet adjacency_path for central node: 989 => [988, 989, 990]
Setting initial triplet adjacency_path for central node: 990 => [989, 990, 997]
triplet adjacency_path of node: 989 => [988, 989, 990] already captured.
triplet adjacency_path of node: 990 => [989, 990, 997] already captured.
Setting initial triplet adjacency_path for central node: 997 => [990, 997, 984]
triplet adjacency_path of node: 984 => [997, 984, 996] already captured.
triplet adjacency_path of node: 990 => [989, 990, 997] already captured.

### 4 nodes have locked-in triplet paths:
Triplet locks for: 997 : [[990, 997, 984]]
Triplet locks for: 984 : [[997, 984, 996]]
Triplet locks for: 989 : [[988, 989, 990]]
Triplet locks for: 990 : [[989, 990, 997]]
### Extracting complex path prefixes from reads.
-capturing path prefixes
-removing prefixes that are subpaths of other prefixes
EXTENDED_TRIPLET_CAPTURED: [988, 989, 990, 997, 984, 996]
EXTENDED_TRIPLET_CAPTURED: [988, 989, 990, 997]
EXTENDED_TRIPLET_CAPTURED: [988, 989, 990, 997, 984]
EXTENDED_TRIPLET_CAPTURED: [988, 989, 990]

#### Extended triplets from reads: 
Complex prefix paths for: 996 : [[988, 989, 990, 997, 984, 996]]
Complex prefix paths for: 997 : [[988, 989, 990, 997]]
Complex prefix paths for: 984 : [[988, 989, 990, 997, 984]]
Complex prefix paths for: 990 : [[988, 989, 990]]
Adding edge from AGCCACAGGT...CTTCCTGTGA:W5(V993_717_D4) to T
Adding edge from S to GCCTCATCAG...TTTCCAAGTA:W1(V994_945_D0)
Adding edge from S to CCACATTTCT...CTTCCTCAAG:W2(V988_380_D0)

SECTION
###############
## Starting Butterfly Assembly ##
###################


PairPaths to assemble:
Start Vertex:-1
PairPaths@BflyStart: PairPath [_paths=[[-1, 988], []]]=1
PairPaths@BflyStart: PairPath [_paths=[[-1, 994], []]]=1
Start Vertex:993
PairPaths@BflyStart: PairPath [_paths=[[993, -2], []]]=1
Start Vertex:994
PairPaths@BflyStart: PairPath [_paths=[[994, 997], []]]=2
Start Vertex:996
PairPaths@BflyStart: PairPath [_paths=[[996, 993], []]]=4
PairPaths@BflyStart: PairPath [_paths=[[996], []]]=14
Start Vertex:997
PairPaths@BflyStart: PairPath [_paths=[[997, 984], []]]=2
PairPaths@BflyStart: PairPath [_paths=[[997, 984, 996], []]]=6
Start Vertex:984
PairPaths@BflyStart: PairPath [_paths=[[984, 996], []]]=2
Start Vertex:988
PairPaths@BflyStart: PairPath [_paths=[[988, 989, 990, 997], []]]=6
PairPaths@BflyStart: PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]]=2
Start Vertex:989
PairPaths@BflyStart: PairPath [_paths=[[989, 990, 997], []]]=2
QUEUE IS: [:W2147483647(V-1_D-1)]


#### getAllProbablePaths() The next node in the queue C is -1
	butterfly pct done: 1 / 8 = 12.5% pct done.
ReadsStartingAtV_START_BFLY, Node: -1 read: PairPath [_paths=[[-1, 988], []]]
ReadsStartingAtV_START_BFLY, Node: -1 read: PairPath [_paths=[[-1, 994], []]]
Exploring extension of: 1 paths that end at vertex: -1

== Current Paths Constructed Up To Vertex: -1 :
PathPartialReconstruction@[-1] : [-1]

Adding the reads {PairPath [_paths=[[-1, 988], []]]=1, PairPath [_paths=[[-1, 994], []]]=1} to the path [-1]


################################################
###### Exploring extension of v: -1 by successor: 994
################################################


Count of paths ending at v: -1 = 1
path_ending_at_v: [-1]


# [PathCounter(994)=0 Examining potential extension of path ending at node V: -1 by successor: 994, via path=[-1]
path [-1] is too short to check for triplet support.
ReadsOfPathUntilV: PATH: [-1]
ReadsOfPathUntiV: READ: PairPath [_paths=[[-1, 994], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[-1, 988], []]]
-checking if subPath has enough read support. Exploring sub path: [-1, 994]
-readsOfPathUntilV: PairPath [_paths=[[-1, 994], []]]
	-checking if pp: PairPath [_paths=[[-1, 994], []]] supports extension of [-1, 994] => true
examining subPath: [-1, 994] for reinforcement by read: [[-1, 994], []] :true
the read PairPath [_paths=[[-1, 994], []]](1) enforces the sub-path ([-1, 994])
-found: 1 reads supporting subpath.
the sub-path ([-1, 994]) has PASSED

Successful extension of 994 to generate path [-1, 994]
updateReadsOfPath: [-1, 994]
read PairPath [_paths=[[-1, 994], []]] is consistent with 994
read PairPath [_paths=[[-1, 988], []]] is not consistent with 994
pct_contained_propagated: 0.0%
994 was added to the queue


################################################
###### Exploring extension of v: -1 by successor: 986
################################################


component either lacks: 986 or at sink


################################################
###### Exploring extension of v: -1 by successor: 988
################################################


Count of paths ending at v: -1 = 1
path_ending_at_v: [-1]


# [PathCounter(988)=0 Examining potential extension of path ending at node V: -1 by successor: 988, via path=[-1]
path [-1] is too short to check for triplet support.
ReadsOfPathUntilV: PATH: [-1]
ReadsOfPathUntiV: READ: PairPath [_paths=[[-1, 994], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[-1, 988], []]]
-checking if subPath has enough read support. Exploring sub path: [-1, 988]
-readsOfPathUntilV: PairPath [_paths=[[-1, 994], []]]
	-checking if pp: PairPath [_paths=[[-1, 994], []]] supports extension of [-1, 988] => false
examining subPath: [-1, 988] for reinforcement by read: [[-1, 994], []] :false
the read PairPath [_paths=[[-1, 994], []]](1) does not enforce the sub-path ([-1, 988])
-readsOfPathUntilV: PairPath [_paths=[[-1, 988], []]]
	-checking if pp: PairPath [_paths=[[-1, 988], []]] supports extension of [-1, 988] => true
examining subPath: [-1, 988] for reinforcement by read: [[-1, 988], []] :true
the read PairPath [_paths=[[-1, 988], []]](1) enforces the sub-path ([-1, 988])
-found: 1 reads supporting subpath.
the sub-path ([-1, 988]) has PASSED

Successful extension of 988 to generate path [-1, 988]
updateReadsOfPath: [-1, 988]
read PairPath [_paths=[[-1, 994], []]] is not consistent with 988
read PairPath [_paths=[[-1, 988], []]] is consistent with 988
pct_contained_propagated: 0.0%
988 was added to the queue
QUEUE IS: [GCCTCATCAG...TTTCCAAGTA:W1(V994_945_D0), CCACATTTCT...CTTCCTCAAG:W2(V988_380_D0)]


#### getAllProbablePaths() The next node in the queue C is 994
	butterfly pct done: 2 / 8 = 25.0% pct done.
ReadsStartingAtV_START_BFLY, Node: 994 read: PairPath [_paths=[[994, 997], []]]
Exploring extension of: 1 paths that end at vertex: 994

== Current Paths Constructed Up To Vertex: 994 :
PathPartialReconstruction@[994] : [-1, 994]

Adding the reads {PairPath [_paths=[[994, 997], []]]=2} to the path [-1, 994]


################################################
###### Exploring extension of v: 994 by successor: 997
################################################


Count of paths ending at v: 994 = 1
path_ending_at_v: [-1, 994]


# [PathCounter(997)=0 Examining potential extension of path ending at node V: 994 by successor: 997, via path=[-1, 994]
path [-1, 994] is too short to check for triplet support.
ReadsOfPathUntilV: PATH: [-1, 994]
ReadsOfPathUntiV: READ: PairPath [_paths=[[994, 997], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[-1, 994], []]]
-checking if subPath has enough read support. Exploring sub path: [994, 997]
-readsOfPathUntilV: PairPath [_paths=[[994, 997], []]]
	-checking if pp: PairPath [_paths=[[994, 997], []]] supports extension of [-1, 994, 997] => true
examining subPath: [994, 997] for reinforcement by read: [[994, 997], []] :true
the read PairPath [_paths=[[994, 997], []]](2) enforces the sub-path ([994, 997])
-found: 2 reads supporting subpath.
the sub-path ([994, 997]) has PASSED

Successful extension of 997 to generate path [-1, 994, 997]
updateReadsOfPath: [-1, 994, 997]
read PairPath [_paths=[[994, 997], []]] is consistent with 997
pct_contained_propagated: 50.0%
997 was added to the queue
QUEUE IS: [CCACATTTCT...CTTCCTCAAG:W2(V988_380_D0), GTGTCTTAAC...GAAGCTCCCT:W6(V997_451_D1)]


#### getAllProbablePaths() The next node in the queue C is 988
	butterfly pct done: 3 / 8 = 37.5% pct done.
ReadsStartingAtV_START_BFLY, Node: 988 read: PairPath [_paths=[[988, 989, 990, 997], []]]
ReadsStartingAtV_START_BFLY, Node: 988 read: PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]]
Exploring extension of: 1 paths that end at vertex: 988

== Current Paths Constructed Up To Vertex: 988 :
PathPartialReconstruction@[988] : [-1, 988]

Adding the reads {PairPath [_paths=[[988, 989, 990, 997], []]]=6, PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]]=2} to the path [-1, 988]


################################################
###### Exploring extension of v: 988 by successor: 989
################################################


Count of paths ending at v: 988 = 1
path_ending_at_v: [-1, 988]


# [PathCounter(989)=0 Examining potential extension of path ending at node V: 988 by successor: 989, via path=[-1, 988]
path [-1, 988] is too short to check for triplet support.
ReadsOfPathUntilV: PATH: [-1, 988]
ReadsOfPathUntiV: READ: PairPath [_paths=[[988, 989, 990, 997], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[-1, 988], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]]
-checking if subPath has enough read support. Exploring sub path: [-1, 988, 989]
-readsOfPathUntilV: PairPath [_paths=[[988, 989, 990, 997], []]]
	-checking if pp: PairPath [_paths=[[988, 989, 990, 997], []]] supports extension of [-1, 988, 989] => true
examining subPath: [-1, 988, 989] for reinforcement by read: [[988, 989, 990, 997], []] :true
the read PairPath [_paths=[[988, 989, 990, 997], []]](6) enforces the sub-path ([-1, 988, 989])
-found: 6 reads supporting subpath.
the sub-path ([-1, 988, 989]) has PASSED

Successful extension of 989 to generate path [-1, 988, 989]
updateReadsOfPath: [-1, 988, 989]
read PairPath [_paths=[[988, 989, 990, 997], []]] is consistent with 989
read PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]] is consistent with 989
pct_contained_propagated: 33.333336%
989 was added to the queue
QUEUE IS: [GTGTCTTAAC...GAAGCTCCCT:W6(V997_451_D1), CCTCATCAGCAAGAAGAAATCTTT:W7(V989_982_D1)]
* delaying tackling vertex: 997 since a parent hasn't been visited yet.


#### getAllProbablePaths() The next node in the queue C is 989
	butterfly pct done: 4 / 8 = 50.0% pct done.
ReadsStartingAtV_START_BFLY, Node: 989 read: PairPath [_paths=[[989, 990, 997], []]]
Exploring extension of: 1 paths that end at vertex: 989

== Current Paths Constructed Up To Vertex: 989 :
PathPartialReconstruction@[989] : [-1, 988, 989]

Adding the reads {PairPath [_paths=[[989, 990, 997], []]]=2} to the path [-1, 988, 989]


################################################
###### Exploring extension of v: 989 by successor: 990
################################################


Count of paths ending at v: 989 = 1
path_ending_at_v: [-1, 988, 989]


# [PathCounter(990)=0 Examining potential extension of path ending at node V: 989 by successor: 990, via path=[-1, 988, 989]
TripletMapper doesnt contain node: 989
ReadsOfPathUntilV: PATH: [-1, 988, 989]
ReadsOfPathUntiV: READ: PairPath [_paths=[[988, 989, 990, 997], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[989, 990, 997], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[-1, 988], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]]
-checking if subPath has enough read support. Exploring sub path: [-1, 988, 989, 990]
-readsOfPathUntilV: PairPath [_paths=[[988, 989, 990, 997], []]]
	-checking if pp: PairPath [_paths=[[988, 989, 990, 997], []]] supports extension of [-1, 988, 989, 990] => true
examining subPath: [-1, 988, 989, 990] for reinforcement by read: [[988, 989, 990, 997], []] :true
the read PairPath [_paths=[[988, 989, 990, 997], []]](6) enforces the sub-path ([-1, 988, 989, 990])
-found: 6 reads supporting subpath.
the sub-path ([-1, 988, 989, 990]) has PASSED

Successful extension of 990 to generate path [-1, 988, 989, 990]
updateReadsOfPath: [-1, 988, 989, 990]
read PairPath [_paths=[[988, 989, 990, 997], []]] is consistent with 990
read PairPath [_paths=[[989, 990, 997], []]] is consistent with 990
read PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]] is consistent with 990
pct_contained_propagated: 25.0%
990 was added to the queue
QUEUE IS: [GTGTCTTAAC...GAAGCTCCCT:W6(V997_451_D1), CTTTCCAAGTA:W8(V990_440_D2)]
* delaying tackling vertex: 997 since a parent hasn't been visited yet.


#### getAllProbablePaths() The next node in the queue C is 990
	butterfly pct done: 5 / 8 = 62.5% pct done.
ReadsStartingAtV_START_BFLY990 EMPTY
Exploring extension of: 1 paths that end at vertex: 990

== Current Paths Constructed Up To Vertex: 990 :
PathPartialReconstruction@[990] : [-1, 988, 989, 990]


################################################
###### Exploring extension of v: 990 by successor: 997
################################################


Count of paths ending at v: 990 = 1
path_ending_at_v: [-1, 988, 989, 990]


# [PathCounter(997)=0 Examining potential extension of path ending at node V: 990 by successor: 997, via path=[-1, 988, 989, 990]
TripletMapper doesnt contain node: 990
ReadsOfPathUntilV: PATH: [-1, 988, 989, 990]
ReadsOfPathUntiV: READ: PairPath [_paths=[[988, 989, 990, 997], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[989, 990, 997], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[-1, 988], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]]
-checking if subPath has enough read support. Exploring sub path: [990, 997]
-readsOfPathUntilV: PairPath [_paths=[[988, 989, 990, 997], []]]
	-checking if pp: PairPath [_paths=[[988, 989, 990, 997], []]] supports extension of [-1, 988, 989, 990, 997] => true
examining subPath: [990, 997] for reinforcement by read: [[988, 989, 990, 997], []] :true
the read PairPath [_paths=[[988, 989, 990, 997], []]](6) enforces the sub-path ([990, 997])
-found: 6 reads supporting subpath.
the sub-path ([990, 997]) has PASSED

Successful extension of 997 to generate path [-1, 988, 989, 990, 997]
updateReadsOfPath: [-1, 988, 989, 990, 997]
read PairPath [_paths=[[988, 989, 990, 997], []]] is consistent with 997
read PairPath [_paths=[[989, 990, 997], []]] is consistent with 997
read PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]] is consistent with 997
pct_contained_propagated: 25.0%
QUEUE IS: [GTGTCTTAAC...GAAGCTCCCT:W6(V997_451_D1)]


#### getAllProbablePaths() The next node in the queue C is 997
	butterfly pct done: 6 / 8 = 75.0% pct done.
ReadsStartingAtV_START_BFLY, Node: 997 read: PairPath [_paths=[[997, 984], []]]
ReadsStartingAtV_START_BFLY, Node: 997 read: PairPath [_paths=[[997, 984, 996], []]]
Exploring extension of: 2 paths that end at vertex: 997

== Current Paths Constructed Up To Vertex: 997 :
PathPartialReconstruction@[997] : [-1, 994, 997]
PathPartialReconstruction@[997] : [-1, 988, 989, 990, 997]

Adding the reads {PairPath [_paths=[[997, 984], []]]=2, PairPath [_paths=[[997, 984, 996], []]]=6} to the path [-1, 994, 997]

Adding the reads {PairPath [_paths=[[997, 984], []]]=2, PairPath [_paths=[[997, 984, 996], []]]=6} to the path [-1, 988, 989, 990, 997]


################################################
###### Exploring extension of v: 997 by successor: 984
################################################


Count of paths ending at v: 997 = 2
path_ending_at_v: [-1, 988, 989, 990, 997]
path_ending_at_v: [-1, 994, 997]


# [PathCounter(984)=0 Examining potential extension of path ending at node V: 997 by successor: 984, via path=[-1, 988, 989, 990, 997]
TripletMapper doesnt contain node: 997
ReadsOfPathUntilV: PATH: [-1, 988, 989, 990, 997]
ReadsOfPathUntiV: READ: PairPath [_paths=[[988, 989, 990, 997], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[989, 990, 997], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[997, 984], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[-1, 988], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[997, 984, 996], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]]
-checking if subPath has enough read support. Exploring sub path: [997, 984]
-readsOfPathUntilV: PairPath [_paths=[[988, 989, 990, 997], []]]
	-checking if pp: PairPath [_paths=[[988, 989, 990, 997], []]] supports extension of [-1, 988, 989, 990, 997, 984] => false
examining subPath: [997, 984] for reinforcement by read: [[988, 989, 990, 997], []] :false
the read PairPath [_paths=[[988, 989, 990, 997], []]](6) does not enforce the sub-path ([997, 984])
-readsOfPathUntilV: PairPath [_paths=[[989, 990, 997], []]]
	-checking if pp: PairPath [_paths=[[989, 990, 997], []]] supports extension of [-1, 988, 989, 990, 997, 984] => false
examining subPath: [997, 984] for reinforcement by read: [[989, 990, 997], []] :false
the read PairPath [_paths=[[989, 990, 997], []]](2) does not enforce the sub-path ([997, 984])
-readsOfPathUntilV: PairPath [_paths=[[997, 984], []]]
	-checking if pp: PairPath [_paths=[[997, 984], []]] supports extension of [-1, 988, 989, 990, 997, 984] => true
examining subPath: [997, 984] for reinforcement by read: [[997, 984], []] :true
the read PairPath [_paths=[[997, 984], []]](2) enforces the sub-path ([997, 984])
-found: 2 reads supporting subpath.
the sub-path ([997, 984]) has PASSED

Successful extension of 984 to generate path [-1, 988, 989, 990, 997, 984]
updateReadsOfPath: [-1, 988, 989, 990, 997, 984]
read PairPath [_paths=[[997, 984], []]] is consistent with 984
read PairPath [_paths=[[997, 984, 996], []]] is consistent with 984
read PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]] is consistent with 984
pct_contained_propagated: 50.0%


# [PathCounter(984)=1 Examining potential extension of path ending at node V: 997 by successor: 984, via path=[-1, 994, 997]
TripletMapper doesnt contain node: 997
ReadsOfPathUntilV: PATH: [-1, 994, 997]
ReadsOfPathUntiV: READ: PairPath [_paths=[[994, 997], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[997, 984], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[997, 984, 996], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[-1, 994], []]]
-checking if subPath has enough read support. Exploring sub path: [997, 984]
-readsOfPathUntilV: PairPath [_paths=[[994, 997], []]]
	-checking if pp: PairPath [_paths=[[994, 997], []]] supports extension of [-1, 994, 997, 984] => false
examining subPath: [997, 984] for reinforcement by read: [[994, 997], []] :false
the read PairPath [_paths=[[994, 997], []]](2) does not enforce the sub-path ([997, 984])
-readsOfPathUntilV: PairPath [_paths=[[997, 984], []]]
	-checking if pp: PairPath [_paths=[[997, 984], []]] supports extension of [-1, 994, 997, 984] => true
examining subPath: [997, 984] for reinforcement by read: [[997, 984], []] :true
the read PairPath [_paths=[[997, 984], []]](2) enforces the sub-path ([997, 984])
-found: 2 reads supporting subpath.
the sub-path ([997, 984]) has PASSED

Successful extension of 984 to generate path [-1, 994, 997, 984]
updateReadsOfPath: [-1, 994, 997, 984]
read PairPath [_paths=[[997, 984], []]] is consistent with 984
read PairPath [_paths=[[997, 984, 996], []]] is consistent with 984
pct_contained_propagated: 50.0%
984 was added to the queue
QUEUE IS: [GAGCACTCTGAACCCTGTGAGGCA:W6(V984_981_D2)]


#### getAllProbablePaths() The next node in the queue C is 984
	butterfly pct done: 7 / 8 = 87.5% pct done.
ReadsStartingAtV_START_BFLY, Node: 984 read: PairPath [_paths=[[984, 996], []]]
Exploring extension of: 2 paths that end at vertex: 984

== Current Paths Constructed Up To Vertex: 984 :
PathPartialReconstruction@[984] : [-1, 988, 989, 990, 997, 984]
PathPartialReconstruction@[984] : [-1, 994, 997, 984]

Adding the reads {PairPath [_paths=[[984, 996], []]]=2} to the path [-1, 988, 989, 990, 997, 984]

Adding the reads {PairPath [_paths=[[984, 996], []]]=2} to the path [-1, 994, 997, 984]


################################################
###### Exploring extension of v: 984 by successor: 996
################################################


Count of paths ending at v: 984 = 2
path_ending_at_v: [-1, 988, 989, 990, 997, 984]
path_ending_at_v: [-1, 994, 997, 984]


# [PathCounter(996)=0 Examining potential extension of path ending at node V: 984 by successor: 996, via path=[-1, 988, 989, 990, 997, 984]
TripletMapper doesnt contain node: 984
ReadsOfPathUntilV: PATH: [-1, 988, 989, 990, 997, 984]
ReadsOfPathUntiV: READ: PairPath [_paths=[[988, 989, 990, 997], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[989, 990, 997], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[997, 984], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[-1, 988], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[997, 984, 996], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[984, 996], []]]
-checking if subPath has enough read support. Exploring sub path: [996]
-readsOfPathUntilV: PairPath [_paths=[[988, 989, 990, 997], []]]
	-checking if pp: PairPath [_paths=[[988, 989, 990, 997], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996] => false
examining subPath: [996] for reinforcement by read: [[988, 989, 990, 997], []] :false
the read PairPath [_paths=[[988, 989, 990, 997], []]](6) does not enforce the sub-path ([996])
-readsOfPathUntilV: PairPath [_paths=[[989, 990, 997], []]]
	-checking if pp: PairPath [_paths=[[989, 990, 997], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996] => false
examining subPath: [996] for reinforcement by read: [[989, 990, 997], []] :false
the read PairPath [_paths=[[989, 990, 997], []]](2) does not enforce the sub-path ([996])
-readsOfPathUntilV: PairPath [_paths=[[997, 984], []]]
	-checking if pp: PairPath [_paths=[[997, 984], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996] => false
examining subPath: [996] for reinforcement by read: [[997, 984], []] :false
the read PairPath [_paths=[[997, 984], []]](2) does not enforce the sub-path ([996])
-readsOfPathUntilV: PairPath [_paths=[[-1, 988], []]]
	-checking if pp: PairPath [_paths=[[-1, 988], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996] => false
examining subPath: [996] for reinforcement by read: [[-1, 988], []] :false
the read PairPath [_paths=[[-1, 988], []]](1) does not enforce the sub-path ([996])
-readsOfPathUntilV: PairPath [_paths=[[997, 984, 996], []]]
	-checking if pp: PairPath [_paths=[[997, 984, 996], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996] => true
examining subPath: [996] for reinforcement by read: [[997, 984, 996], []] :true
the read PairPath [_paths=[[997, 984, 996], []]](6) enforces the sub-path ([996])
-found: 6 reads supporting subpath.
the sub-path ([996]) has PASSED

Successful extension of 996 to generate path [-1, 988, 989, 990, 997, 984, 996]
updateReadsOfPath: [-1, 988, 989, 990, 997, 984, 996]
read PairPath [_paths=[[997, 984, 996], []]] is consistent with 996
read PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]] is consistent with 996
read PairPath [_paths=[[984, 996], []]] is consistent with 996
pct_contained_propagated: 57.14286%


# [PathCounter(996)=1 Examining potential extension of path ending at node V: 984 by successor: 996, via path=[-1, 994, 997, 984]
TripletMapper doesnt contain node: 984
ReadsOfPathUntilV: PATH: [-1, 994, 997, 984]
ReadsOfPathUntiV: READ: PairPath [_paths=[[994, 997], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[997, 984], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[997, 984, 996], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[984, 996], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[-1, 994], []]]
-checking if subPath has enough read support. Exploring sub path: [996]
-readsOfPathUntilV: PairPath [_paths=[[994, 997], []]]
	-checking if pp: PairPath [_paths=[[994, 997], []]] supports extension of [-1, 994, 997, 984, 996] => false
examining subPath: [996] for reinforcement by read: [[994, 997], []] :false
the read PairPath [_paths=[[994, 997], []]](2) does not enforce the sub-path ([996])
-readsOfPathUntilV: PairPath [_paths=[[997, 984], []]]
	-checking if pp: PairPath [_paths=[[997, 984], []]] supports extension of [-1, 994, 997, 984, 996] => false
examining subPath: [996] for reinforcement by read: [[997, 984], []] :false
the read PairPath [_paths=[[997, 984], []]](2) does not enforce the sub-path ([996])
-readsOfPathUntilV: PairPath [_paths=[[997, 984, 996], []]]
	-checking if pp: PairPath [_paths=[[997, 984, 996], []]] supports extension of [-1, 994, 997, 984, 996] => true
examining subPath: [996] for reinforcement by read: [[997, 984, 996], []] :true
the read PairPath [_paths=[[997, 984, 996], []]](6) enforces the sub-path ([996])
-found: 6 reads supporting subpath.
the sub-path ([996]) has PASSED

Successful extension of 996 to generate path [-1, 994, 997, 984, 996]
updateReadsOfPath: [-1, 994, 997, 984, 996]
read PairPath [_paths=[[997, 984, 996], []]] is consistent with 996
read PairPath [_paths=[[984, 996], []]] is consistent with 996
pct_contained_propagated: 60.000004%
996 was added to the queue
QUEUE IS: [AGTCCACCAC...GGGAGCCACC:W6(V996_549_D3)]


#### getAllProbablePaths() The next node in the queue C is 996
	butterfly pct done: 8 / 8 = 100.0% pct done.
ReadsStartingAtV_START_BFLY, Node: 996 read: PairPath [_paths=[[996, 993], []]]
ReadsStartingAtV_START_BFLY, Node: 996 read: PairPath [_paths=[[996], []]]
Exploring extension of: 2 paths that end at vertex: 996

== Current Paths Constructed Up To Vertex: 996 :
PathPartialReconstruction@[996] : [-1, 988, 989, 990, 997, 984, 996]
PathPartialReconstruction@[996] : [-1, 994, 997, 984, 996]

Adding the reads {PairPath [_paths=[[996, 993], []]]=4, PairPath [_paths=[[996], []]]=14} to the path [-1, 988, 989, 990, 997, 984, 996]

Adding the reads {PairPath [_paths=[[996, 993], []]]=4, PairPath [_paths=[[996], []]]=14} to the path [-1, 994, 997, 984, 996]


################################################
###### Exploring extension of v: 996 by successor: 993
################################################


Count of paths ending at v: 996 = 2
path_ending_at_v: [-1, 988, 989, 990, 997, 984, 996]
path_ending_at_v: [-1, 994, 997, 984, 996]


# [PathCounter(993)=0 Examining potential extension of path ending at node V: 996 by successor: 993, via path=[-1, 988, 989, 990, 997, 984, 996]
TripletMapper doesnt contain node: 996
ReadsOfPathUntilV: PATH: [-1, 988, 989, 990, 997, 984, 996]
ReadsOfPathUntiV: READ: PairPath [_paths=[[988, 989, 990, 997], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[989, 990, 997], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[997, 984], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[-1, 988], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[997, 984, 996], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[984, 996], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[996, 993], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[996], []]]
-checking if subPath has enough read support. Exploring sub path: [996, 993]
-readsOfPathUntilV: PairPath [_paths=[[988, 989, 990, 997], []]]
	-checking if pp: PairPath [_paths=[[988, 989, 990, 997], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996, 993] => false
examining subPath: [996, 993] for reinforcement by read: [[988, 989, 990, 997], []] :false
the read PairPath [_paths=[[988, 989, 990, 997], []]](6) does not enforce the sub-path ([996, 993])
-readsOfPathUntilV: PairPath [_paths=[[989, 990, 997], []]]
	-checking if pp: PairPath [_paths=[[989, 990, 997], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996, 993] => false
examining subPath: [996, 993] for reinforcement by read: [[989, 990, 997], []] :false
the read PairPath [_paths=[[989, 990, 997], []]](2) does not enforce the sub-path ([996, 993])
-readsOfPathUntilV: PairPath [_paths=[[997, 984], []]]
	-checking if pp: PairPath [_paths=[[997, 984], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996, 993] => false
examining subPath: [996, 993] for reinforcement by read: [[997, 984], []] :false
the read PairPath [_paths=[[997, 984], []]](2) does not enforce the sub-path ([996, 993])
-readsOfPathUntilV: PairPath [_paths=[[-1, 988], []]]
	-checking if pp: PairPath [_paths=[[-1, 988], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996, 993] => false
examining subPath: [996, 993] for reinforcement by read: [[-1, 988], []] :false
the read PairPath [_paths=[[-1, 988], []]](1) does not enforce the sub-path ([996, 993])
-readsOfPathUntilV: PairPath [_paths=[[997, 984, 996], []]]
	-checking if pp: PairPath [_paths=[[997, 984, 996], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996, 993] => false
examining subPath: [996, 993] for reinforcement by read: [[997, 984, 996], []] :false
the read PairPath [_paths=[[997, 984, 996], []]](6) does not enforce the sub-path ([996, 993])
-readsOfPathUntilV: PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]]
	-checking if pp: PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996, 993] => false
examining subPath: [996, 993] for reinforcement by read: [[988, 989, 990, 997, 984, 996], []] :false
the read PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]](2) does not enforce the sub-path ([996, 993])
-readsOfPathUntilV: PairPath [_paths=[[984, 996], []]]
	-checking if pp: PairPath [_paths=[[984, 996], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996, 993] => false
examining subPath: [996, 993] for reinforcement by read: [[984, 996], []] :false
the read PairPath [_paths=[[984, 996], []]](2) does not enforce the sub-path ([996, 993])
-readsOfPathUntilV: PairPath [_paths=[[996, 993], []]]
	-checking if pp: PairPath [_paths=[[996, 993], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996, 993] => true
examining subPath: [996, 993] for reinforcement by read: [[996, 993], []] :true
the read PairPath [_paths=[[996, 993], []]](4) enforces the sub-path ([996, 993])
-found: 4 reads supporting subpath.
the sub-path ([996, 993]) has PASSED

Successful extension of 993 to generate path [-1, 988, 989, 990, 997, 984, 996, 993]
updateReadsOfPath: [-1, 988, 989, 990, 997, 984, 996, 993]
read PairPath [_paths=[[996, 993], []]] is consistent with 993
read PairPath [_paths=[[996], []]] is consistent with 993
pct_contained_propagated: 77.77778%


# [PathCounter(993)=1 Examining potential extension of path ending at node V: 996 by successor: 993, via path=[-1, 994, 997, 984, 996]
TripletMapper doesnt contain node: 996
ReadsOfPathUntilV: PATH: [-1, 994, 997, 984, 996]
ReadsOfPathUntiV: READ: PairPath [_paths=[[994, 997], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[997, 984], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[997, 984, 996], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[984, 996], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[996, 993], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[-1, 994], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[996], []]]
-checking if subPath has enough read support. Exploring sub path: [996, 993]
-readsOfPathUntilV: PairPath [_paths=[[994, 997], []]]
	-checking if pp: PairPath [_paths=[[994, 997], []]] supports extension of [-1, 994, 997, 984, 996, 993] => false
examining subPath: [996, 993] for reinforcement by read: [[994, 997], []] :false
the read PairPath [_paths=[[994, 997], []]](2) does not enforce the sub-path ([996, 993])
-readsOfPathUntilV: PairPath [_paths=[[997, 984], []]]
	-checking if pp: PairPath [_paths=[[997, 984], []]] supports extension of [-1, 994, 997, 984, 996, 993] => false
examining subPath: [996, 993] for reinforcement by read: [[997, 984], []] :false
the read PairPath [_paths=[[997, 984], []]](2) does not enforce the sub-path ([996, 993])
-readsOfPathUntilV: PairPath [_paths=[[997, 984, 996], []]]
	-checking if pp: PairPath [_paths=[[997, 984, 996], []]] supports extension of [-1, 994, 997, 984, 996, 993] => false
examining subPath: [996, 993] for reinforcement by read: [[997, 984, 996], []] :false
the read PairPath [_paths=[[997, 984, 996], []]](6) does not enforce the sub-path ([996, 993])
-readsOfPathUntilV: PairPath [_paths=[[984, 996], []]]
	-checking if pp: PairPath [_paths=[[984, 996], []]] supports extension of [-1, 994, 997, 984, 996, 993] => false
examining subPath: [996, 993] for reinforcement by read: [[984, 996], []] :false
the read PairPath [_paths=[[984, 996], []]](2) does not enforce the sub-path ([996, 993])
-readsOfPathUntilV: PairPath [_paths=[[996, 993], []]]
	-checking if pp: PairPath [_paths=[[996, 993], []]] supports extension of [-1, 994, 997, 984, 996, 993] => true
examining subPath: [996, 993] for reinforcement by read: [[996, 993], []] :true
the read PairPath [_paths=[[996, 993], []]](4) enforces the sub-path ([996, 993])
-found: 4 reads supporting subpath.
the sub-path ([996, 993]) has PASSED

Successful extension of 993 to generate path [-1, 994, 997, 984, 996, 993]
updateReadsOfPath: [-1, 994, 997, 984, 996, 993]
read PairPath [_paths=[[996, 993], []]] is consistent with 993
read PairPath [_paths=[[996], []]] is consistent with 993
pct_contained_propagated: 71.42857%
993 was added to the queue
QUEUE IS: [AGCCACAGGT...CTTCCTGTGA:W5(V993_717_D4)]


#### getAllProbablePaths() The next node in the queue C is 993
	butterfly pct done: 9 / 8 = 112.5% pct done.
ReadsStartingAtV_START_BFLY, Node: 993 read: PairPath [_paths=[[993, -2], []]]
Exploring extension of: 2 paths that end at vertex: 993

== Current Paths Constructed Up To Vertex: 993 :
PathPartialReconstruction@[993] : [-1, 988, 989, 990, 997, 984, 996, 993]
PathPartialReconstruction@[993] : [-1, 994, 997, 984, 996, 993]

Adding the reads {PairPath [_paths=[[993, -2], []]]=1} to the path [-1, 988, 989, 990, 997, 984, 996, 993]

Adding the reads {PairPath [_paths=[[993, -2], []]]=1} to the path [-1, 994, 997, 984, 996, 993]


################################################
###### Exploring extension of v: 993 by successor: -2
################################################


Count of paths ending at v: 993 = 2
path_ending_at_v: [-1, 988, 989, 990, 997, 984, 996, 993]
path_ending_at_v: [-1, 994, 997, 984, 996, 993]


# [PathCounter(-2)=0 Examining potential extension of path ending at node V: 993 by successor: -2, via path=[-1, 988, 989, 990, 997, 984, 996, 993]
TripletMapper doesnt contain node: 993
ReadsOfPathUntilV: PATH: [-1, 988, 989, 990, 997, 984, 996, 993]
ReadsOfPathUntiV: READ: PairPath [_paths=[[988, 989, 990, 997], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[989, 990, 997], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[997, 984], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[-1, 988], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[997, 984, 996], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[984, 996], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[996, 993], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[993, -2], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[996], []]]
-checking if subPath has enough read support. Exploring sub path: [996, 993, -2]
-readsOfPathUntilV: PairPath [_paths=[[988, 989, 990, 997], []]]
	-checking if pp: PairPath [_paths=[[988, 989, 990, 997], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996, 993, -2] => false
examining subPath: [996, 993, -2] for reinforcement by read: [[988, 989, 990, 997], []] :false
the read PairPath [_paths=[[988, 989, 990, 997], []]](6) does not enforce the sub-path ([996, 993, -2])
-readsOfPathUntilV: PairPath [_paths=[[989, 990, 997], []]]
	-checking if pp: PairPath [_paths=[[989, 990, 997], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996, 993, -2] => false
examining subPath: [996, 993, -2] for reinforcement by read: [[989, 990, 997], []] :false
the read PairPath [_paths=[[989, 990, 997], []]](2) does not enforce the sub-path ([996, 993, -2])
-readsOfPathUntilV: PairPath [_paths=[[997, 984], []]]
	-checking if pp: PairPath [_paths=[[997, 984], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996, 993, -2] => false
examining subPath: [996, 993, -2] for reinforcement by read: [[997, 984], []] :false
the read PairPath [_paths=[[997, 984], []]](2) does not enforce the sub-path ([996, 993, -2])
-readsOfPathUntilV: PairPath [_paths=[[-1, 988], []]]
	-checking if pp: PairPath [_paths=[[-1, 988], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996, 993, -2] => false
examining subPath: [996, 993, -2] for reinforcement by read: [[-1, 988], []] :false
the read PairPath [_paths=[[-1, 988], []]](1) does not enforce the sub-path ([996, 993, -2])
-readsOfPathUntilV: PairPath [_paths=[[997, 984, 996], []]]
	-checking if pp: PairPath [_paths=[[997, 984, 996], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996, 993, -2] => false
examining subPath: [996, 993, -2] for reinforcement by read: [[997, 984, 996], []] :false
the read PairPath [_paths=[[997, 984, 996], []]](6) does not enforce the sub-path ([996, 993, -2])
-readsOfPathUntilV: PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]]
	-checking if pp: PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996, 993, -2] => false
examining subPath: [996, 993, -2] for reinforcement by read: [[988, 989, 990, 997, 984, 996], []] :false
the read PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]](2) does not enforce the sub-path ([996, 993, -2])
-readsOfPathUntilV: PairPath [_paths=[[984, 996], []]]
	-checking if pp: PairPath [_paths=[[984, 996], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996, 993, -2] => false
examining subPath: [996, 993, -2] for reinforcement by read: [[984, 996], []] :false
the read PairPath [_paths=[[984, 996], []]](2) does not enforce the sub-path ([996, 993, -2])
-readsOfPathUntilV: PairPath [_paths=[[996, 993], []]]
	-checking if pp: PairPath [_paths=[[996, 993], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996, 993, -2] => false
examining subPath: [996, 993, -2] for reinforcement by read: [[996, 993], []] :false
the read PairPath [_paths=[[996, 993], []]](4) does not enforce the sub-path ([996, 993, -2])
-readsOfPathUntilV: PairPath [_paths=[[993, -2], []]]
	-checking if pp: PairPath [_paths=[[993, -2], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996, 993, -2] => false
examining subPath: [996, 993, -2] for reinforcement by read: [[993, -2], []] :false
the read PairPath [_paths=[[993, -2], []]](1) does not enforce the sub-path ([996, 993, -2])
-readsOfPathUntilV: PairPath [_paths=[[996], []]]
	-checking if pp: PairPath [_paths=[[996], []]] supports extension of [-1, 988, 989, 990, 997, 984, 996, 993, -2] => false
examining subPath: [996, 993, -2] for reinforcement by read: [[996], []] :false
the read PairPath [_paths=[[996], []]](14) does not enforce the sub-path ([996, 993, -2])
-found: 0 reads supporting subpath.
the sub-path ([996, 993, -2]) has NOT PASSED

Successful extension of -2 to generate path [-1, 988, 989, 990, 997, 984, 996, 993, -2]
updateReadsOfPath: [-1, 988, 989, 990, 997, 984, 996, 993, -2]
read PairPath [_paths=[[993, -2], []]] is consistent with -2
pct_contained_propagated: 90.0%


# [PathCounter(-2)=1 Examining potential extension of path ending at node V: 993 by successor: -2, via path=[-1, 994, 997, 984, 996, 993]
TripletMapper doesnt contain node: 993
ReadsOfPathUntilV: PATH: [-1, 994, 997, 984, 996, 993]
ReadsOfPathUntiV: READ: PairPath [_paths=[[994, 997], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[997, 984], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[997, 984, 996], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[984, 996], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[996, 993], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[993, -2], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[-1, 994], []]]
ReadsOfPathUntiV: READ: PairPath [_paths=[[996], []]]
-checking if subPath has enough read support. Exploring sub path: [996, 993, -2]
-readsOfPathUntilV: PairPath [_paths=[[994, 997], []]]
	-checking if pp: PairPath [_paths=[[994, 997], []]] supports extension of [-1, 994, 997, 984, 996, 993, -2] => false
examining subPath: [996, 993, -2] for reinforcement by read: [[994, 997], []] :false
the read PairPath [_paths=[[994, 997], []]](2) does not enforce the sub-path ([996, 993, -2])
-readsOfPathUntilV: PairPath [_paths=[[997, 984], []]]
	-checking if pp: PairPath [_paths=[[997, 984], []]] supports extension of [-1, 994, 997, 984, 996, 993, -2] => false
examining subPath: [996, 993, -2] for reinforcement by read: [[997, 984], []] :false
the read PairPath [_paths=[[997, 984], []]](2) does not enforce the sub-path ([996, 993, -2])
-readsOfPathUntilV: PairPath [_paths=[[997, 984, 996], []]]
	-checking if pp: PairPath [_paths=[[997, 984, 996], []]] supports extension of [-1, 994, 997, 984, 996, 993, -2] => false
examining subPath: [996, 993, -2] for reinforcement by read: [[997, 984, 996], []] :false
the read PairPath [_paths=[[997, 984, 996], []]](6) does not enforce the sub-path ([996, 993, -2])
-readsOfPathUntilV: PairPath [_paths=[[984, 996], []]]
	-checking if pp: PairPath [_paths=[[984, 996], []]] supports extension of [-1, 994, 997, 984, 996, 993, -2] => false
examining subPath: [996, 993, -2] for reinforcement by read: [[984, 996], []] :false
the read PairPath [_paths=[[984, 996], []]](2) does not enforce the sub-path ([996, 993, -2])
-readsOfPathUntilV: PairPath [_paths=[[996, 993], []]]
	-checking if pp: PairPath [_paths=[[996, 993], []]] supports extension of [-1, 994, 997, 984, 996, 993, -2] => false
examining subPath: [996, 993, -2] for reinforcement by read: [[996, 993], []] :false
the read PairPath [_paths=[[996, 993], []]](4) does not enforce the sub-path ([996, 993, -2])
-readsOfPathUntilV: PairPath [_paths=[[993, -2], []]]
	-checking if pp: PairPath [_paths=[[993, -2], []]] supports extension of [-1, 994, 997, 984, 996, 993, -2] => false
examining subPath: [996, 993, -2] for reinforcement by read: [[993, -2], []] :false
the read PairPath [_paths=[[993, -2], []]](1) does not enforce the sub-path ([996, 993, -2])
-readsOfPathUntilV: PairPath [_paths=[[-1, 994], []]]
	-checking if pp: PairPath [_paths=[[-1, 994], []]] supports extension of [-1, 994, 997, 984, 996, 993, -2] => false
examining subPath: [996, 993, -2] for reinforcement by read: [[-1, 994], []] :false
the read PairPath [_paths=[[-1, 994], []]](1) does not enforce the sub-path ([996, 993, -2])
-readsOfPathUntilV: PairPath [_paths=[[996], []]]
	-checking if pp: PairPath [_paths=[[996], []]] supports extension of [-1, 994, 997, 984, 996, 993, -2] => false
examining subPath: [996, 993, -2] for reinforcement by read: [[996], []] :false
the read PairPath [_paths=[[996], []]](14) does not enforce the sub-path ([996, 993, -2])
-found: 0 reads supporting subpath.
the sub-path ([996, 993, -2]) has NOT PASSED

Successful extension of -2 to generate path [-1, 994, 997, 984, 996, 993, -2]
updateReadsOfPath: [-1, 994, 997, 984, 996, 993, -2]
read PairPath [_paths=[[993, -2], []]] is consistent with -2
pct_contained_propagated: 87.5%
-2 was added to the queue
QUEUE IS: [:W-1(V-2_D-1)]


#### getAllProbablePaths() The next node in the queue C is -2
	butterfly pct done: 10 / 8 = 125.0% pct done.
ReadsStartingAtV_START_BFLY-2 EMPTY
Exploring extension of: 2 paths that end at vertex: -2

== Current Paths Constructed Up To Vertex: -2 :
PathPartialReconstruction@[-2] : [-1, 988, 989, 990, 997, 984, 996, 993, -2]
PathPartialReconstruction@[-2] : [-1, 994, 997, 984, 996, 993, -2]
the finished path: [-1, 988, 989, 990, 997, 984, 996, 993, -2] was added to the final paths, with 40 support
the finished path: [-1, 994, 997, 984, 996, 993, -2] was added to the final paths, with 32 support
-reconstructing sequence for path[: 1 of 2]: [-1, 988, 989, 990, 997, 984, 996, 993, -2]
-reconstructing sequence for path[: 2 of 2]: [-1, 994, 997, 984, 996, 993, -2]


****  Removing identical subsequences among: 2 paths.



[0,1]    FinalPath@BeforeFiltering: [-1, 988, 989, 990, 997, 984, 996, 993, -2]
FinalPath@BeforeFiltering: [-1, 994, 997, 984, 996, 993, -2]
ReadMappings BEFORE Path-to-orig_ID conversion:


## assignCompatibleReadsToPaths()
assignCompatibleReadsToPaths: PairPath [_paths=[[-1, 988], []]] is compatible with [-1, 988, 989, 990, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[-1, 994], []]] is NOT compatible with [-1, 988, 989, 990, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[993, -2], []]] is compatible with [-1, 988, 989, 990, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[994, 997], []]] is NOT compatible with [-1, 988, 989, 990, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[996, 993], []]] is compatible with [-1, 988, 989, 990, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[996], []]] is compatible with [-1, 988, 989, 990, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[997, 984], []]] is compatible with [-1, 988, 989, 990, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[997, 984, 996], []]] is compatible with [-1, 988, 989, 990, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[984, 996], []]] is compatible with [-1, 988, 989, 990, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[988, 989, 990, 997], []]] is compatible with [-1, 988, 989, 990, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]] is compatible with [-1, 988, 989, 990, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[989, 990, 997], []]] is compatible with [-1, 988, 989, 990, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[-1, 988], []]] is NOT compatible with [-1, 994, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[-1, 994], []]] is compatible with [-1, 994, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[993, -2], []]] is compatible with [-1, 994, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[994, 997], []]] is compatible with [-1, 994, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[996, 993], []]] is compatible with [-1, 994, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[996], []]] is compatible with [-1, 994, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[997, 984], []]] is compatible with [-1, 994, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[997, 984, 996], []]] is compatible with [-1, 994, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[984, 996], []]] is compatible with [-1, 994, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[988, 989, 990, 997], []]] is NOT compatible with [-1, 994, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]] is NOT compatible with [-1, 994, 997, 984, 996, 993, -2]
assignCompatibleReadsToPaths: PairPath [_paths=[[989, 990, 997], []]] is NOT compatible with [-1, 994, 997, 984, 996, 993, -2]
PRELIM_FINAL_PATH:
[-1, 988, 989, 990, 997, 984, 996, 993, -2]
contains:
PairPath [_paths=[[988, 989, 990, 997], []]]	count: 6
PairPath [_paths=[[989, 990, 997], []]]	count: 2
PairPath [_paths=[[997, 984], []]]	count: 2
PairPath [_paths=[[-1, 988], []]]	count: 1
PairPath [_paths=[[997, 984, 996], []]]	count: 6
PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]]	count: 2
PairPath [_paths=[[984, 996], []]]	count: 2
PairPath [_paths=[[993, -2], []]]	count: 1
PairPath [_paths=[[996, 993], []]]	count: 4
PairPath [_paths=[[996], []]]	count: 14
Total support: 40

PRELIM_FINAL_PATH:
[-1, 994, 997, 984, 996, 993, -2]
contains:
PairPath [_paths=[[994, 997], []]]	count: 2
PairPath [_paths=[[997, 984], []]]	count: 2
PairPath [_paths=[[997, 984, 996], []]]	count: 6
PairPath [_paths=[[984, 996], []]]	count: 2
PairPath [_paths=[[993, -2], []]]	count: 1
PairPath [_paths=[[996, 993], []]]	count: 4
PairPath [_paths=[[-1, 994], []]]	count: 1
PairPath [_paths=[[996], []]]	count: 14
Total support: 32

## ILLUSTRATING FINAL ASSEMBLIES

PATH: [-1, 988, 989, 990, 997, 984, 996, 993, -2]

Path Illustration:

=========    PATH: [-1, 988, 989, 990, 997, 984, 996, 993, -2]
==           Read: [[-1, 988], []] read_support: 1
 ====        Read: [[988, 989, 990, 997], []] read_support: 6
 ======      Read: [[988, 989, 990, 997, 984, 996], []] read_support: 2
  ===        Read: [[989, 990, 997], []] read_support: 2
    ==       Read: [[997, 984], []] read_support: 2
    ===      Read: [[997, 984, 996], []] read_support: 6
     ==      Read: [[984, 996], []] read_support: 2
      ==     Read: [[996, 993], []] read_support: 4
      =      Read: [[996], []] read_support: 14
       ==    Read: [[993, -2], []] read_support: 1



PATH: [-1, 994, 997, 984, 996, 993, -2]

Path Illustration:

=======    PATH: [-1, 994, 997, 984, 996, 993, -2]
==         Read: [[-1, 994], []] read_support: 1
 ==        Read: [[994, 997], []] read_support: 2
  ==       Read: [[997, 984], []] read_support: 2
  ===      Read: [[997, 984, 996], []] read_support: 6
   ==      Read: [[984, 996], []] read_support: 2
    ==     Read: [[996, 993], []] read_support: 4
    =      Read: [[996], []] read_support: 14
     ==    Read: [[993, -2], []] read_support: 1


Converting graph node IDs back to original IDs.
-final_path: [-1, 988, 989, 990, 997, 984, 996, 993, -2] now set to: [-1, 380, 982, 440, 451, 981, 549, 717, -2]
-and set to contents: <40, 0>
pp: PairPath [_paths=[[988, 989, 990, 997], []]], updated_pp: PairPath [_paths=[[380, 982, 440, 451], []]], count: 6
pp: PairPath [_paths=[[989, 990, 997], []]], updated_pp: PairPath [_paths=[[982, 440, 451], []]], count: 2
pp: PairPath [_paths=[[997, 984], []]], updated_pp: PairPath [_paths=[[451, 981], []]], count: 2
pp: PairPath [_paths=[[-1, 988], []]], updated_pp: PairPath [_paths=[[-1, 380], []]], count: 1
pp: PairPath [_paths=[[997, 984, 996], []]], updated_pp: PairPath [_paths=[[451, 981, 549], []]], count: 6
pp: PairPath [_paths=[[988, 989, 990, 997, 984, 996], []]], updated_pp: PairPath [_paths=[[380, 982, 440, 451, 981, 549], []]], count: 2
pp: PairPath [_paths=[[984, 996], []]], updated_pp: PairPath [_paths=[[981, 549], []]], count: 2
pp: PairPath [_paths=[[993, -2], []]], updated_pp: PairPath [_paths=[[717, -2], []]], count: 1
pp: PairPath [_paths=[[996, 993], []]], updated_pp: PairPath [_paths=[[549, 717], []]], count: 4
pp: PairPath [_paths=[[996], []]], updated_pp: PairPath [_paths=[[549], []]], count: 14
-final_path: [-1, 994, 997, 984, 996, 993, -2] now set to: [-1, 945, 451, 981, 549, 717, -2]
-and set to contents: <32, 0>
pp: PairPath [_paths=[[994, 997], []]], updated_pp: PairPath [_paths=[[945, 451], []]], count: 2
pp: PairPath [_paths=[[997, 984], []]], updated_pp: PairPath [_paths=[[451, 981], []]], count: 2
pp: PairPath [_paths=[[997, 984, 996], []]], updated_pp: PairPath [_paths=[[451, 981, 549], []]], count: 6
pp: PairPath [_paths=[[984, 996], []]], updated_pp: PairPath [_paths=[[981, 549], []]], count: 2
pp: PairPath [_paths=[[993, -2], []]], updated_pp: PairPath [_paths=[[717, -2], []]], count: 1
pp: PairPath [_paths=[[996, 993], []]], updated_pp: PairPath [_paths=[[549, 717], []]], count: 4
pp: PairPath [_paths=[[-1, 994], []]], updated_pp: PairPath [_paths=[[-1, 945], []]], count: 1
pp: PairPath [_paths=[[996], []]], updated_pp: PairPath [_paths=[[549], []]], count: 14
** Post-original ID conversion, path support:
PRELIM_FINAL_PATH:
[-1, 945, 451, 981, 549, 717, -2]
contains:
PairPath [_paths=[[945, 451], []]]	count: 2
PairPath [_paths=[[549, 717], []]]	count: 4
PairPath [_paths=[[717, -2], []]]	count: 1
PairPath [_paths=[[451, 981, 549], []]]	count: 6
PairPath [_paths=[[451, 981], []]]	count: 2
PairPath [_paths=[[549], []]]	count: 14
PairPath [_paths=[[-1, 945], []]]	count: 1
PairPath [_paths=[[981, 549], []]]	count: 2
Total support: 32

PRELIM_FINAL_PATH:
[-1, 380, 982, 440, 451, 981, 549, 717, -2]
contains:
PairPath [_paths=[[549, 717], []]]	count: 4
PairPath [_paths=[[982, 440, 451], []]]	count: 2
PairPath [_paths=[[-1, 380], []]]	count: 1
PairPath [_paths=[[717, -2], []]]	count: 1
PairPath [_paths=[[451, 981, 549], []]]	count: 6
PairPath [_paths=[[380, 982, 440, 451, 981, 549], []]]	count: 2
PairPath [_paths=[[451, 981], []]]	count: 2
PairPath [_paths=[[549], []]]	count: 14
PairPath [_paths=[[380, 982, 440, 451], []]]	count: 6
PairPath [_paths=[[981, 549], []]]	count: 2
Total support: 40

SECTION
========= CD-HIT -like Removal of Too-Similar Sequences with Lesser Read Support =========




****  CD-HIT style path collapsing at end of run.



[0,1]   

****

checking twoPathsAreTooSimilar ([-1, 380, 982, 440, 451, 981, 549, 717, -2],[-1, 945, 451, 981, 549, 717, -2])
****


getPrevCalcNumMismatches: Path1: [-1, 380, 982, 440, 451, 981, 549, 717, -2]  Path2: [-1, 945, 451, 981, 549, 717, -2]
Paths [-1, 380, 982, 440, 451, 981, 549, 717, -2][-1, 945, 451, 981, 549, 717, -2] share node 717
getting prefix alignment for [-1, 380, 982, 440, 451, 981, 549][-1, 945, 451, 981, 549]
getPrevCalcNumMismatches: Path1: [-1, 380, 982, 440, 451, 981, 549]  Path2: [-1, 945, 451, 981, 549]
Paths [-1, 380, 982, 440, 451, 981, 549][-1, 945, 451, 981, 549] share node 549
getting prefix alignment for [-1, 380, 982, 440, 451, 981][-1, 945, 451, 981]
getPrevCalcNumMismatches: Path1: [-1, 380, 982, 440, 451, 981]  Path2: [-1, 945, 451, 981]
Paths [-1, 380, 982, 440, 451, 981][-1, 945, 451, 981] share node 981
getting prefix alignment for [-1, 380, 982, 440, 451][-1, 945, 451]
getPrevCalcNumMismatches: Path1: [-1, 380, 982, 440, 451]  Path2: [-1, 945, 451]
Paths [-1, 380, 982, 440, 451][-1, 945, 451] share node 451
getting prefix alignment for [-1, 380, 982, 440][-1, 945]
getPrevCalcNumMismatches: Path1: [-1, 380, 982, 440]  Path2: [-1, 945]
-no shared node, alignment not cached, computing: [-1, 380, 982, 440] to [-1, 945]
-path1s length: 94, path2s length: 59
-running Needleman-Wunsch alignment of path sequences
Aug 05, 2024 11:50:13 PM jaligner.NeedlemanWunschGotoh construct
INFO: Started...
Aug 05, 2024 11:50:13 PM jaligner.NeedlemanWunschGotoh construct
INFO: Finished.
Aug 05, 2024 11:50:13 PM jaligner.NeedlemanWunschGotoh traceback
INFO: Started...
Aug 05, 2024 11:50:13 PM jaligner.NeedlemanWunschGotoh traceback
INFO: Finished.
A                  1 GGCCACACGATGGCTTATCACGTCCACATTTCTACTGGCTACAAACAGAC     50
                                                        .|..||||||..|.|
B                  1 -----------------------------------AGAATACAAAATGCC     15

A                 51 TTCCTCAAGCCTCATCAGCAAGAAGAAATCTTTCTTTCCAAGTA     94
                     ||||||.|||||||||||||.|||||||||||||||||||||||
B                 16 TTCCTCCAGCCTCATCAGCAGGAAGAAATCTTTCTTTCCAAGTA     59


Percent A in alignment = 59 / 94 = 62.765957%
Percent B in alignment = 59 / 59 = 100.0%
Matches: 51, Mismatches: 8, gaps: 0, align_len: 59
percent_identity: 86.440674, percent_gapped: 0.0
max_percent_aligned: 100.0
max internal gap length: 0

(start of graph) Total number of significant alignment diffs = (mismatches: 8 + internal_gaps: 0 + right_gap_len: 0  = 8
AlignmentStats: matches: 51, mismatches: 8, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 8
path prefix alignment stats for: [-1, 380, 982, 440] and [-1, 945] : matches: 51, mismatches: 8, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 8
getPrevCalcNumMismatches: Path1: [451]  Path2: [451]
paths are equivalent: Path1:[451], Path2:[451] and have alignment stats:matches: 97, mismatches: 0, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 0
getting suffix alignment for: [][]
getPrevCalcNumMismatches: Path1: []  Path2: []
suffix alignment stats: matches: 0, mismatches: 0, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 0
combining suffix and prefix alignment stats: matches: 148, mismatches: 8, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 8
path prefix alignment stats for: [-1, 380, 982, 440, 451] and [-1, 945, 451] : matches: 148, mismatches: 8, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 8
getPrevCalcNumMismatches: Path1: [981]  Path2: [981]
paths are equivalent: Path1:[981], Path2:[981] and have alignment stats:matches: 47, mismatches: 0, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 0
getting suffix alignment for: [][]
getPrevCalcNumMismatches: Path1: []  Path2: []
key: [];[], cached as: matches: 0, mismatches: 0, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 0
suffix alignment stats: matches: 0, mismatches: 0, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 0
combining suffix and prefix alignment stats: matches: 195, mismatches: 8, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 8
path prefix alignment stats for: [-1, 380, 982, 440, 451, 981] and [-1, 945, 451, 981] : matches: 195, mismatches: 8, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 8
getPrevCalcNumMismatches: Path1: [549]  Path2: [549]
paths are equivalent: Path1:[549], Path2:[549] and have alignment stats:matches: 191, mismatches: 0, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 0
getting suffix alignment for: [][]
getPrevCalcNumMismatches: Path1: []  Path2: []
key: [];[], cached as: matches: 0, mismatches: 0, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 0
suffix alignment stats: matches: 0, mismatches: 0, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 0
combining suffix and prefix alignment stats: matches: 386, mismatches: 8, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 8
path prefix alignment stats for: [-1, 380, 982, 440, 451, 981, 549] and [-1, 945, 451, 981, 549] : matches: 386, mismatches: 8, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 8
getPrevCalcNumMismatches: Path1: [717]  Path2: [717]
paths are equivalent: Path1:[717], Path2:[717] and have alignment stats:matches: 65, mismatches: 0, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 0
getting suffix alignment for: [-2][-2]
getPrevCalcNumMismatches: Path1: [-2]  Path2: [-2]
suffix alignment stats: matches: 0, mismatches: 0, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 0
combining suffix and prefix alignment stats: matches: 451, mismatches: 8, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 8
the two paths have these stats: numMM=8, max_internal_gap_length=0, identity=97.82%, tooSimilar: false


====
Running PATH alignment of : [-1, 380, 982, 440, 451, 981, 549, 717, -2] to [-1, 945, 451, 981, 549, 717, -2] :: numMM:8, max_internal_gap: 0, path_per_id = 97.82, tooSimilar: false
matches: 451, mismatches: 8, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 8


*** REDUCE: they are PLENTY DIFFERENT ***


SECTION
========= CD-HIT -like Removal of Too-Similar Sequences with Lesser Read Support =========




****  CD-HIT style path collapsing at end of run.



[0,1]   

****

checking twoPathsAreTooSimilar ([-1, 380, 982, 440, 451, 981, 549, 717, -2],[-1, 945, 451, 981, 549, 717, -2])
****


getPrevCalcNumMismatches: Path1: [-1, 380, 982, 440, 451, 981, 549, 717, -2]  Path2: [-1, 945, 451, 981, 549, 717, -2]
key: [-1, 945, 451, 981, 549, 717, -2];[-1, 380, 982, 440, 451, 981, 549, 717, -2], cached as: matches: 451, mismatches: 8, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 8
the two paths have these stats: numMM=8, max_internal_gap_length=0, identity=97.82%, tooSimilar: false


====
Running PATH alignment of : [-1, 380, 982, 440, 451, 981, 549, 717, -2] to [-1, 945, 451, 981, 549, 717, -2] :: numMM:8, max_internal_gap: 0, path_per_id = 97.82, tooSimilar: false
matches: 451, mismatches: 8, internal gaps: 0, left_gap: 0, right_gap: 0, total_diffs: 8


*** REDUCE: they are PLENTY DIFFERENT ***


Grouping paths into genes
Isoform_overlap: Path_i:[-1, 380, 982, 440, 451, 981, 549, 717, -2], Path_j: [-1, 945, 451, 981, 549, 717, -2], overlap = 87.14597%
IsoformEdge linking: [-1, 380, 982, 440, 451, 981, 549, 717, -2] to [-1, 945, 451, 981, 549, 717, -2]
IsoformClustering, number of clusters = 1
GeneCluster[1] contains: [-1, 945, 451, 981, 549, 717, -2]
GeneCluster[1] contains: [-1, 380, 982, 440, 451, 981, 549, 717, -2]
Sep Gene IDs:{[-1, 945, 451, 981, 549, 717, -2]=1, [-1, 380, 982, 440, 451, 981, 549, 717, -2]=1}
SECTION
====== ## BFLY_EM_REDUCE ## ==========


EM on: 2 paths.
// initializing EM (round 0)
Frag assignment for trans: [-1, 945, 451, 981, 549, 717, -2]
len=367 expr=0.4291335 sum_frags=17.5
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[945, 451], []]]
FRAGS_ASSIGNED: [2.0, 50.0%] for read: PairPath [_paths=[[549, 717], []]]
FRAGS_ASSIGNED: [0.5, 50.0%] for read: PairPath [_paths=[[717, -2], []]]
FRAGS_ASSIGNED: [3.0, 50.0%] for read: PairPath [_paths=[[451, 981, 549], []]]
FRAGS_ASSIGNED: [1.0, 50.0%] for read: PairPath [_paths=[[451, 981], []]]
FRAGS_ASSIGNED: [7.0, 50.0%] for read: PairPath [_paths=[[549], []]]
FRAGS_ASSIGNED: [1.0, 100.0%] for read: PairPath [_paths=[[-1, 945], []]]
FRAGS_ASSIGNED: [1.0, 50.0%] for read: PairPath [_paths=[[981, 549], []]]

Frag assignment for trans: [-1, 380, 982, 440, 451, 981, 549, 717, -2]
len=402 expr=0.57086647 sum_frags=25.5
FRAGS_ASSIGNED: [2.0, 50.0%] for read: PairPath [_paths=[[549, 717], []]]
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[982, 440, 451], []]]
FRAGS_ASSIGNED: [1.0, 100.0%] for read: PairPath [_paths=[[-1, 380], []]]
FRAGS_ASSIGNED: [0.5, 50.0%] for read: PairPath [_paths=[[717, -2], []]]
FRAGS_ASSIGNED: [3.0, 50.0%] for read: PairPath [_paths=[[451, 981, 549], []]]
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[380, 982, 440, 451, 981, 549], []]]
FRAGS_ASSIGNED: [1.0, 50.0%] for read: PairPath [_paths=[[451, 981], []]]
FRAGS_ASSIGNED: [7.0, 50.0%] for read: PairPath [_paths=[[549], []]]
FRAGS_ASSIGNED: [6.0, 100.0%] for read: PairPath [_paths=[[380, 982, 440, 451], []]]
FRAGS_ASSIGNED: [1.0, 50.0%] for read: PairPath [_paths=[[981, 549], []]]



============================================
EM-round[0]
####  ACCOUNTING FOR EXPR VALUES
expr: 0.4291335 for path: [-1, 945, 451, 981, 549, 717, -2]
expr: 0.57086647 for path: [-1, 380, 982, 440, 451, 981, 549, 717, -2]

** Sum expr: 1.0


sum_pp_log_likelihood: -23.833495394134374 for PP: PairPath [_paths=[[549, 717], []]]
sum_pp_log_likelihood: -13.608721939671875 for PP: PairPath [_paths=[[945, 451], []]]
sum_pp_log_likelihood: -13.037947638954698 for PP: PairPath [_paths=[[982, 440, 451], []]]
sum_pp_log_likelihood: -6.518973819477349 for PP: PairPath [_paths=[[-1, 380], []]]
sum_pp_log_likelihood: -5.9583738485335935 for PP: PairPath [_paths=[[717, -2], []]]
sum_pp_log_likelihood: -35.75024309120156 for PP: PairPath [_paths=[[451, 981, 549], []]]
sum_pp_log_likelihood: -13.037947638954698 for PP: PairPath [_paths=[[380, 982, 440, 451, 981, 549], []]]
sum_pp_log_likelihood: -11.916747697067187 for PP: PairPath [_paths=[[451, 981], []]]
sum_pp_log_likelihood: -83.4172338794703 for PP: PairPath [_paths=[[549], []]]
sum_pp_log_likelihood: -6.804360969835938 for PP: PairPath [_paths=[[-1, 945], []]]
sum_pp_log_likelihood: -39.113842916864094 for PP: PairPath [_paths=[[380, 982, 440, 451], []]]
sum_pp_log_likelihood: -11.916747697067187 for PP: PairPath [_paths=[[981, 549], []]]


============================================
EM-round[1]
Total frags: 43.0

Frag assignment for trans: [-1, 945, 451, 981, 549, 717, -2]
len=367 expr=0.4291335 sum_frags=15.444872
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[945, 451], []]]
FRAGS_ASSIGNED: [1.7165341, 42.913353%] for read: PairPath [_paths=[[549, 717], []]]
FRAGS_ASSIGNED: [0.42913353, 42.913353%] for read: PairPath [_paths=[[717, -2], []]]
FRAGS_ASSIGNED: [2.5748012, 42.913353%] for read: PairPath [_paths=[[451, 981, 549], []]]
FRAGS_ASSIGNED: [0.85826707, 42.913353%] for read: PairPath [_paths=[[451, 981], []]]
FRAGS_ASSIGNED: [6.0078697, 42.913357%] for read: PairPath [_paths=[[549], []]]
FRAGS_ASSIGNED: [1.0, 100.0%] for read: PairPath [_paths=[[-1, 945], []]]
FRAGS_ASSIGNED: [0.85826707, 42.913353%] for read: PairPath [_paths=[[981, 549], []]]

Frag assignment for trans: [-1, 380, 982, 440, 451, 981, 549, 717, -2]
len=402 expr=0.57086647 sum_frags=27.555128
FRAGS_ASSIGNED: [2.2834659, 57.086647%] for read: PairPath [_paths=[[549, 717], []]]
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[982, 440, 451], []]]
FRAGS_ASSIGNED: [1.0, 100.0%] for read: PairPath [_paths=[[-1, 380], []]]
FRAGS_ASSIGNED: [0.57086647, 57.086647%] for read: PairPath [_paths=[[717, -2], []]]
FRAGS_ASSIGNED: [3.4251988, 57.086647%] for read: PairPath [_paths=[[451, 981, 549], []]]
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[380, 982, 440, 451, 981, 549], []]]
FRAGS_ASSIGNED: [1.1417329, 57.086647%] for read: PairPath [_paths=[[451, 981], []]]
FRAGS_ASSIGNED: [7.9921303, 57.086647%] for read: PairPath [_paths=[[549], []]]
FRAGS_ASSIGNED: [6.0, 100.0%] for read: PairPath [_paths=[[380, 982, 440, 451], []]]
FRAGS_ASSIGNED: [1.1417329, 57.086647%] for read: PairPath [_paths=[[981, 549], []]]

sum_pp_log_likelihood: -23.851084579736636 for PP: PairPath [_paths=[[549, 717], []]]
sum_pp_log_likelihood: -13.858569839950583 for PP: PairPath [_paths=[[945, 451], []]]
sum_pp_log_likelihood: -12.882927091892052 for PP: PairPath [_paths=[[982, 440, 451], []]]
sum_pp_log_likelihood: -6.441463545946026 for PP: PairPath [_paths=[[-1, 380], []]]
sum_pp_log_likelihood: -5.962771144934159 for PP: PairPath [_paths=[[717, -2], []]]
sum_pp_log_likelihood: -35.776626869604954 for PP: PairPath [_paths=[[451, 981, 549], []]]
sum_pp_log_likelihood: -12.882927091892052 for PP: PairPath [_paths=[[380, 982, 440, 451, 981, 549], []]]
sum_pp_log_likelihood: -11.925542289868318 for PP: PairPath [_paths=[[451, 981], []]]
sum_pp_log_likelihood: -83.47879602907823 for PP: PairPath [_paths=[[549], []]]
sum_pp_log_likelihood: -6.9292849199752915 for PP: PairPath [_paths=[[-1, 945], []]]
sum_pp_log_likelihood: -38.64878127567616 for PP: PairPath [_paths=[[380, 982, 440, 451], []]]
sum_pp_log_likelihood: -11.925542289868318 for PP: PairPath [_paths=[[981, 549], []]]
EM round[1] Prev: -264.91464, curr: -264.56433, delta: 0.35031128 [seconds: 0]

####  ACCOUNTING FOR EXPR VALUES
expr: 0.38040692 for path: [-1, 945, 451, 981, 549, 717, -2]
expr: 0.6195931 for path: [-1, 380, 982, 440, 451, 981, 549, 717, -2]

** Sum expr: 1.0




============================================
EM-round[2]
Total frags: 43.0

Frag assignment for trans: [-1, 945, 451, 981, 549, 717, -2]
len=367 expr=0.38040692 sum_frags=14.0318
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[945, 451], []]]
FRAGS_ASSIGNED: [1.5216277, 38.04069%] for read: PairPath [_paths=[[549, 717], []]]
FRAGS_ASSIGNED: [0.38040692, 38.04069%] for read: PairPath [_paths=[[717, -2], []]]
FRAGS_ASSIGNED: [2.2824416, 38.040695%] for read: PairPath [_paths=[[451, 981, 549], []]]
FRAGS_ASSIGNED: [0.76081383, 38.04069%] for read: PairPath [_paths=[[451, 981], []]]
FRAGS_ASSIGNED: [5.325697, 38.04069%] for read: PairPath [_paths=[[549], []]]
FRAGS_ASSIGNED: [1.0, 100.0%] for read: PairPath [_paths=[[-1, 945], []]]
FRAGS_ASSIGNED: [0.76081383, 38.04069%] for read: PairPath [_paths=[[981, 549], []]]

Frag assignment for trans: [-1, 380, 982, 440, 451, 981, 549, 717, -2]
len=402 expr=0.6195931 sum_frags=28.968197
FRAGS_ASSIGNED: [2.478372, 61.9593%] for read: PairPath [_paths=[[549, 717], []]]
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[982, 440, 451], []]]
FRAGS_ASSIGNED: [1.0, 100.0%] for read: PairPath [_paths=[[-1, 380], []]]
FRAGS_ASSIGNED: [0.619593, 61.9593%] for read: PairPath [_paths=[[717, -2], []]]
FRAGS_ASSIGNED: [3.7175581, 61.9593%] for read: PairPath [_paths=[[451, 981, 549], []]]
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[380, 982, 440, 451, 981, 549], []]]
FRAGS_ASSIGNED: [1.239186, 61.9593%] for read: PairPath [_paths=[[451, 981], []]]
FRAGS_ASSIGNED: [8.674302, 61.9593%] for read: PairPath [_paths=[[549], []]]
FRAGS_ASSIGNED: [6.0, 100.0%] for read: PairPath [_paths=[[380, 982, 440, 451], []]]
FRAGS_ASSIGNED: [1.239186, 61.9593%] for read: PairPath [_paths=[[981, 549], []]]

sum_pp_log_likelihood: -23.863223915046387 for PP: PairPath [_paths=[[549, 717], []]]
sum_pp_log_likelihood: -14.050471368066567 for PP: PairPath [_paths=[[945, 451], []]]
sum_pp_log_likelihood: -12.782907194791283 for PP: PairPath [_paths=[[982, 440, 451], []]]
sum_pp_log_likelihood: -6.391453597395642 for PP: PairPath [_paths=[[-1, 380], []]]
sum_pp_log_likelihood: -5.965805978761597 for PP: PairPath [_paths=[[717, -2], []]]
sum_pp_log_likelihood: -35.79483587256958 for PP: PairPath [_paths=[[451, 981, 549], []]]
sum_pp_log_likelihood: -12.782907194791283 for PP: PairPath [_paths=[[380, 982, 440, 451, 981, 549], []]]
sum_pp_log_likelihood: -11.931611957523193 for PP: PairPath [_paths=[[451, 981], []]]
sum_pp_log_likelihood: -83.52128370266236 for PP: PairPath [_paths=[[549], []]]
sum_pp_log_likelihood: -7.025235684033284 for PP: PairPath [_paths=[[-1, 945], []]]
sum_pp_log_likelihood: -38.34872158437385 for PP: PairPath [_paths=[[380, 982, 440, 451], []]]
sum_pp_log_likelihood: -11.931611957523193 for PP: PairPath [_paths=[[981, 549], []]]
EM round[2] Prev: -264.56433, curr: -264.39008, delta: 0.17425537 [seconds: 0]

####  ACCOUNTING FOR EXPR VALUES
expr: 0.34665343 for path: [-1, 945, 451, 981, 549, 717, -2]
expr: 0.65334654 for path: [-1, 380, 982, 440, 451, 981, 549, 717, -2]

** Sum expr: 1.0




============================================
EM-round[3]
Total frags: 43.0

Frag assignment for trans: [-1, 945, 451, 981, 549, 717, -2]
len=367 expr=0.34665343 sum_frags=13.052951
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[945, 451], []]]
FRAGS_ASSIGNED: [1.3866138, 34.665344%] for read: PairPath [_paths=[[549, 717], []]]
FRAGS_ASSIGNED: [0.34665346, 34.665344%] for read: PairPath [_paths=[[717, -2], []]]
FRAGS_ASSIGNED: [2.0799208, 34.665344%] for read: PairPath [_paths=[[451, 981, 549], []]]
FRAGS_ASSIGNED: [0.6933069, 34.665344%] for read: PairPath [_paths=[[451, 981], []]]
FRAGS_ASSIGNED: [4.8531485, 34.665344%] for read: PairPath [_paths=[[549], []]]
FRAGS_ASSIGNED: [1.0, 100.0%] for read: PairPath [_paths=[[-1, 945], []]]
FRAGS_ASSIGNED: [0.6933069, 34.665344%] for read: PairPath [_paths=[[981, 549], []]]

Frag assignment for trans: [-1, 380, 982, 440, 451, 981, 549, 717, -2]
len=402 expr=0.65334654 sum_frags=29.947048
FRAGS_ASSIGNED: [2.6133862, 65.334656%] for read: PairPath [_paths=[[549, 717], []]]
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[982, 440, 451], []]]
FRAGS_ASSIGNED: [1.0, 100.0%] for read: PairPath [_paths=[[-1, 380], []]]
FRAGS_ASSIGNED: [0.65334654, 65.334656%] for read: PairPath [_paths=[[717, -2], []]]
FRAGS_ASSIGNED: [3.9200792, 65.334656%] for read: PairPath [_paths=[[451, 981, 549], []]]
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[380, 982, 440, 451, 981, 549], []]]
FRAGS_ASSIGNED: [1.3066931, 65.334656%] for read: PairPath [_paths=[[451, 981], []]]
FRAGS_ASSIGNED: [9.146852, 65.334656%] for read: PairPath [_paths=[[549], []]]
FRAGS_ASSIGNED: [6.0, 100.0%] for read: PairPath [_paths=[[380, 982, 440, 451], []]]
FRAGS_ASSIGNED: [1.3066931, 65.334656%] for read: PairPath [_paths=[[981, 549], []]]

sum_pp_log_likelihood: -23.871654349975895 for PP: PairPath [_paths=[[549, 717], []]]
sum_pp_log_likelihood: -14.195095277929715 for PP: PairPath [_paths=[[945, 451], []]]
sum_pp_log_likelihood: -12.71644277516921 for PP: PairPath [_paths=[[982, 440, 451], []]]
sum_pp_log_likelihood: -6.358221387584605 for PP: PairPath [_paths=[[-1, 380], []]]
sum_pp_log_likelihood: -5.967913587493974 for PP: PairPath [_paths=[[717, -2], []]]
sum_pp_log_likelihood: -35.80748152496384 for PP: PairPath [_paths=[[451, 981, 549], []]]
sum_pp_log_likelihood: -12.71644277516921 for PP: PairPath [_paths=[[380, 982, 440, 451, 981, 549], []]]
sum_pp_log_likelihood: -11.935827174987947 for PP: PairPath [_paths=[[451, 981], []]]
sum_pp_log_likelihood: -83.55079022491563 for PP: PairPath [_paths=[[549], []]]
sum_pp_log_likelihood: -7.0975476389648575 for PP: PairPath [_paths=[[-1, 945], []]]
sum_pp_log_likelihood: -38.149328325507625 for PP: PairPath [_paths=[[380, 982, 440, 451], []]]
sum_pp_log_likelihood: -11.935827174987947 for PP: PairPath [_paths=[[981, 549], []]]
EM round[3] Prev: -264.39008, curr: -264.30258, delta: 0.0874939 [seconds: 0]

####  ACCOUNTING FOR EXPR VALUES
expr: 0.3231515 for path: [-1, 945, 451, 981, 549, 717, -2]
expr: 0.67684853 for path: [-1, 380, 982, 440, 451, 981, 549, 717, -2]

** Sum expr: 1.0




============================================
EM-round[4]
Total frags: 43.0

Frag assignment for trans: [-1, 945, 451, 981, 549, 717, -2]
len=367 expr=0.3231515 sum_frags=12.371393
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[945, 451], []]]
FRAGS_ASSIGNED: [1.292606, 32.31515%] for read: PairPath [_paths=[[549, 717], []]]
FRAGS_ASSIGNED: [0.3231515, 32.31515%] for read: PairPath [_paths=[[717, -2], []]]
FRAGS_ASSIGNED: [1.938909, 32.31515%] for read: PairPath [_paths=[[451, 981, 549], []]]
FRAGS_ASSIGNED: [0.646303, 32.31515%] for read: PairPath [_paths=[[451, 981], []]]
FRAGS_ASSIGNED: [4.524121, 32.31515%] for read: PairPath [_paths=[[549], []]]
FRAGS_ASSIGNED: [1.0, 100.0%] for read: PairPath [_paths=[[-1, 945], []]]
FRAGS_ASSIGNED: [0.646303, 32.31515%] for read: PairPath [_paths=[[981, 549], []]]

Frag assignment for trans: [-1, 380, 982, 440, 451, 981, 549, 717, -2]
len=402 expr=0.67684853 sum_frags=30.628607
FRAGS_ASSIGNED: [2.7073941, 67.68485%] for read: PairPath [_paths=[[549, 717], []]]
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[982, 440, 451], []]]
FRAGS_ASSIGNED: [1.0, 100.0%] for read: PairPath [_paths=[[-1, 380], []]]
FRAGS_ASSIGNED: [0.67684853, 67.68485%] for read: PairPath [_paths=[[717, -2], []]]
FRAGS_ASSIGNED: [4.0610914, 67.68486%] for read: PairPath [_paths=[[451, 981, 549], []]]
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[380, 982, 440, 451, 981, 549], []]]
FRAGS_ASSIGNED: [1.3536971, 67.68485%] for read: PairPath [_paths=[[451, 981], []]]
FRAGS_ASSIGNED: [9.47588, 67.68485%] for read: PairPath [_paths=[[549], []]]
FRAGS_ASSIGNED: [6.0, 100.0%] for read: PairPath [_paths=[[380, 982, 440, 451], []]]
FRAGS_ASSIGNED: [1.3536971, 67.68485%] for read: PairPath [_paths=[[981, 549], []]]

sum_pp_log_likelihood: -23.87753497919904 for PP: PairPath [_paths=[[549, 717], []]]
sum_pp_log_likelihood: -14.302350298549943 for PP: PairPath [_paths=[[945, 451], []]]
sum_pp_log_likelihood: -12.671435565613965 for PP: PairPath [_paths=[[982, 440, 451], []]]
sum_pp_log_likelihood: -6.335717782806983 for PP: PairPath [_paths=[[-1, 380], []]]
sum_pp_log_likelihood: -5.96938374479976 for PP: PairPath [_paths=[[717, -2], []]]
sum_pp_log_likelihood: -35.81630246879856 for PP: PairPath [_paths=[[451, 981, 549], []]]
sum_pp_log_likelihood: -12.671435565613965 for PP: PairPath [_paths=[[380, 982, 440, 451, 981, 549], []]]
sum_pp_log_likelihood: -11.93876748959952 for PP: PairPath [_paths=[[451, 981], []]]
sum_pp_log_likelihood: -83.57137242719665 for PP: PairPath [_paths=[[549], []]]
sum_pp_log_likelihood: -7.151175149274971 for PP: PairPath [_paths=[[-1, 945], []]]
sum_pp_log_likelihood: -38.0143066968419 for PP: PairPath [_paths=[[380, 982, 440, 451], []]]
sum_pp_log_likelihood: -11.93876748959952 for PP: PairPath [_paths=[[981, 549], []]]
EM round[4] Prev: -264.30258, curr: -264.25854, delta: 0.044036865 [seconds: 0]

####  ACCOUNTING FOR EXPR VALUES
expr: 0.30672878 for path: [-1, 945, 451, 981, 549, 717, -2]
expr: 0.6932712 for path: [-1, 380, 982, 440, 451, 981, 549, 717, -2]

** Sum expr: 1.0




============================================
EM-round[5]
Total frags: 43.0

Frag assignment for trans: [-1, 945, 451, 981, 549, 717, -2]
len=367 expr=0.30672878 sum_frags=11.895135
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[945, 451], []]]
FRAGS_ASSIGNED: [1.2269151, 30.672878%] for read: PairPath [_paths=[[549, 717], []]]
FRAGS_ASSIGNED: [0.30672878, 30.672878%] for read: PairPath [_paths=[[717, -2], []]]
FRAGS_ASSIGNED: [1.8403727, 30.672878%] for read: PairPath [_paths=[[451, 981, 549], []]]
FRAGS_ASSIGNED: [0.61345756, 30.672878%] for read: PairPath [_paths=[[451, 981], []]]
FRAGS_ASSIGNED: [4.294203, 30.672878%] for read: PairPath [_paths=[[549], []]]
FRAGS_ASSIGNED: [1.0, 100.0%] for read: PairPath [_paths=[[-1, 945], []]]
FRAGS_ASSIGNED: [0.61345756, 30.672878%] for read: PairPath [_paths=[[981, 549], []]]

Frag assignment for trans: [-1, 380, 982, 440, 451, 981, 549, 717, -2]
len=402 expr=0.6932712 sum_frags=31.104862
FRAGS_ASSIGNED: [2.7730846, 69.32712%] for read: PairPath [_paths=[[549, 717], []]]
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[982, 440, 451], []]]
FRAGS_ASSIGNED: [1.0, 100.0%] for read: PairPath [_paths=[[-1, 380], []]]
FRAGS_ASSIGNED: [0.69327116, 69.32712%] for read: PairPath [_paths=[[717, -2], []]]
FRAGS_ASSIGNED: [4.159627, 69.32712%] for read: PairPath [_paths=[[451, 981, 549], []]]
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[380, 982, 440, 451, 981, 549], []]]
FRAGS_ASSIGNED: [1.3865423, 69.32712%] for read: PairPath [_paths=[[451, 981], []]]
FRAGS_ASSIGNED: [9.705796, 69.32712%] for read: PairPath [_paths=[[549], []]]
FRAGS_ASSIGNED: [6.0, 100.0%] for read: PairPath [_paths=[[380, 982, 440, 451], []]]
FRAGS_ASSIGNED: [1.3865423, 69.32712%] for read: PairPath [_paths=[[981, 549], []]]

sum_pp_log_likelihood: -23.88164963914862 for PP: PairPath [_paths=[[549, 717], []]]
sum_pp_log_likelihood: -14.38086508513366 for PP: PairPath [_paths=[[945, 451], []]]
sum_pp_log_likelihood: -12.640575967216929 for PP: PairPath [_paths=[[982, 440, 451], []]]
sum_pp_log_likelihood: -6.320287983608464 for PP: PairPath [_paths=[[-1, 380], []]]
sum_pp_log_likelihood: -5.970412409787155 for PP: PairPath [_paths=[[717, -2], []]]
sum_pp_log_likelihood: -35.82247445872293 for PP: PairPath [_paths=[[451, 981, 549], []]]
sum_pp_log_likelihood: -12.640575967216929 for PP: PairPath [_paths=[[380, 982, 440, 451, 981, 549], []]]
sum_pp_log_likelihood: -11.94082481957431 for PP: PairPath [_paths=[[451, 981], []]]
sum_pp_log_likelihood: -83.58577373702016 for PP: PairPath [_paths=[[549], []]]
sum_pp_log_likelihood: -7.19043254256683 for PP: PairPath [_paths=[[-1, 945], []]]
sum_pp_log_likelihood: -37.92172790165078 for PP: PairPath [_paths=[[380, 982, 440, 451], []]]
sum_pp_log_likelihood: -11.94082481957431 for PP: PairPath [_paths=[[981, 549], []]]
EM round[5] Prev: -264.25854, curr: -264.23642, delta: 0.022125244 [seconds: 0]

####  ACCOUNTING FOR EXPR VALUES
expr: 0.29522422 for path: [-1, 945, 451, 981, 549, 717, -2]
expr: 0.70477575 for path: [-1, 380, 982, 440, 451, 981, 549, 717, -2]

** Sum expr: 1.0




============================================
EM-round[6]
Total frags: 43.0

Frag assignment for trans: [-1, 945, 451, 981, 549, 717, -2]
len=367 expr=0.29522422 sum_frags=11.561502
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[945, 451], []]]
FRAGS_ASSIGNED: [1.1808969, 29.522423%] for read: PairPath [_paths=[[549, 717], []]]
FRAGS_ASSIGNED: [0.29522422, 29.522423%] for read: PairPath [_paths=[[717, -2], []]]
FRAGS_ASSIGNED: [1.7713454, 29.522423%] for read: PairPath [_paths=[[451, 981, 549], []]]
FRAGS_ASSIGNED: [0.59044844, 29.522423%] for read: PairPath [_paths=[[451, 981], []]]
FRAGS_ASSIGNED: [4.133139, 29.522423%] for read: PairPath [_paths=[[549], []]]
FRAGS_ASSIGNED: [1.0, 100.0%] for read: PairPath [_paths=[[-1, 945], []]]
FRAGS_ASSIGNED: [0.59044844, 29.522423%] for read: PairPath [_paths=[[981, 549], []]]

Frag assignment for trans: [-1, 380, 982, 440, 451, 981, 549, 717, -2]
len=402 expr=0.70477575 sum_frags=31.438498
FRAGS_ASSIGNED: [2.819103, 70.47758%] for read: PairPath [_paths=[[549, 717], []]]
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[982, 440, 451], []]]
FRAGS_ASSIGNED: [1.0, 100.0%] for read: PairPath [_paths=[[-1, 380], []]]
FRAGS_ASSIGNED: [0.70477575, 70.47758%] for read: PairPath [_paths=[[717, -2], []]]
FRAGS_ASSIGNED: [4.2286544, 70.47758%] for read: PairPath [_paths=[[451, 981, 549], []]]
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[380, 982, 440, 451, 981, 549], []]]
FRAGS_ASSIGNED: [1.4095515, 70.47758%] for read: PairPath [_paths=[[451, 981], []]]
FRAGS_ASSIGNED: [9.86686, 70.47758%] for read: PairPath [_paths=[[549], []]]
FRAGS_ASSIGNED: [6.0, 100.0%] for read: PairPath [_paths=[[380, 982, 440, 451], []]]
FRAGS_ASSIGNED: [1.4095515, 70.47758%] for read: PairPath [_paths=[[981, 549], []]]

sum_pp_log_likelihood: -23.88453453877154 for PP: PairPath [_paths=[[549, 717], []]]
sum_pp_log_likelihood: -14.437762328772989 for PP: PairPath [_paths=[[945, 451], []]]
sum_pp_log_likelihood: -12.619238094761245 for PP: PairPath [_paths=[[982, 440, 451], []]]
sum_pp_log_likelihood: -6.309619047380623 for PP: PairPath [_paths=[[-1, 380], []]]
sum_pp_log_likelihood: -5.971133634692885 for PP: PairPath [_paths=[[717, -2], []]]
sum_pp_log_likelihood: -35.82680180815731 for PP: PairPath [_paths=[[451, 981, 549], []]]
sum_pp_log_likelihood: -12.619238094761245 for PP: PairPath [_paths=[[380, 982, 440, 451, 981, 549], []]]
sum_pp_log_likelihood: -11.94226726938577 for PP: PairPath [_paths=[[451, 981], []]]
sum_pp_log_likelihood: -83.59587088570039 for PP: PairPath [_paths=[[549], []]]
sum_pp_log_likelihood: -7.218881164386494 for PP: PairPath [_paths=[[-1, 945], []]]
sum_pp_log_likelihood: -37.85771428428374 for PP: PairPath [_paths=[[380, 982, 440, 451], []]]
sum_pp_log_likelihood: -11.94226726938577 for PP: PairPath [_paths=[[981, 549], []]]
EM round[6] Prev: -264.23642, curr: -264.22534, delta: 0.011077881 [seconds: 0]

####  ACCOUNTING FOR EXPR VALUES
expr: 0.28715086 for path: [-1, 945, 451, 981, 549, 717, -2]
expr: 0.71284914 for path: [-1, 380, 982, 440, 451, 981, 549, 717, -2]

** Sum expr: 1.0




============================================
EM-round[7]
Total frags: 43.000004

Frag assignment for trans: [-1, 945, 451, 981, 549, 717, -2]
len=367 expr=0.28715086 sum_frags=11.327374
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[945, 451], []]]
FRAGS_ASSIGNED: [1.1486034, 28.715086%] for read: PairPath [_paths=[[549, 717], []]]
FRAGS_ASSIGNED: [0.28715086, 28.715086%] for read: PairPath [_paths=[[717, -2], []]]
FRAGS_ASSIGNED: [1.7229052, 28.715086%] for read: PairPath [_paths=[[451, 981, 549], []]]
FRAGS_ASSIGNED: [0.5743017, 28.715086%] for read: PairPath [_paths=[[451, 981], []]]
FRAGS_ASSIGNED: [4.020112, 28.715086%] for read: PairPath [_paths=[[549], []]]
FRAGS_ASSIGNED: [1.0, 100.0%] for read: PairPath [_paths=[[-1, 945], []]]
FRAGS_ASSIGNED: [0.5743017, 28.715086%] for read: PairPath [_paths=[[981, 549], []]]

Frag assignment for trans: [-1, 380, 982, 440, 451, 981, 549, 717, -2]
len=402 expr=0.71284914 sum_frags=31.672628
FRAGS_ASSIGNED: [2.8513968, 71.28492%] for read: PairPath [_paths=[[549, 717], []]]
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[982, 440, 451], []]]
FRAGS_ASSIGNED: [1.0, 100.0%] for read: PairPath [_paths=[[-1, 380], []]]
FRAGS_ASSIGNED: [0.7128492, 71.28492%] for read: PairPath [_paths=[[717, -2], []]]
FRAGS_ASSIGNED: [4.2770953, 71.28492%] for read: PairPath [_paths=[[451, 981, 549], []]]
FRAGS_ASSIGNED: [2.0, 100.0%] for read: PairPath [_paths=[[380, 982, 440, 451, 981, 549], []]]
FRAGS_ASSIGNED: [1.4256984, 71.28492%] for read: PairPath [_paths=[[451, 981], []]]
FRAGS_ASSIGNED: [9.979889, 71.28492%] for read: PairPath [_paths=[[549], []]]
FRAGS_ASSIGNED: [6.0, 100.0%] for read: PairPath [_paths=[[380, 982, 440, 451], []]]
FRAGS_ASSIGNED: [1.4256984, 71.28492%] for read: PairPath [_paths=[[981, 549], []]]

sum_pp_log_likelihood: -23.88656024720119 for PP: PairPath [_paths=[[549, 717], []]]
sum_pp_log_likelihood: -14.47867955886598 for PP: PairPath [_paths=[[945, 451], []]]
sum_pp_log_likelihood: -12.604398963940202 for PP: PairPath [_paths=[[982, 440, 451], []]]
sum_pp_log_likelihood: -6.302199481970101 for PP: PairPath [_paths=[[-1, 380], []]]
sum_pp_log_likelihood: -5.971640061800297 for PP: PairPath [_paths=[[717, -2], []]]
sum_pp_log_likelihood: -35.82984037080178 for PP: PairPath [_paths=[[451, 981, 549], []]]
sum_pp_log_likelihood: -12.604398963940202 for PP: PairPath [_paths=[[380, 982, 440, 451, 981, 549], []]]
sum_pp_log_likelihood: -11.943280123600594 for PP: PairPath [_paths=[[451, 981], []]]
sum_pp_log_likelihood: -83.60296086520415 for PP: PairPath [_paths=[[549], []]]
sum_pp_log_likelihood: -7.23933977943299 for PP: PairPath [_paths=[[-1, 945], []]]
sum_pp_log_likelihood: -37.81319689182061 for PP: PairPath [_paths=[[380, 982, 440, 451], []]]
sum_pp_log_likelihood: -11.943280123600594 for PP: PairPath [_paths=[[981, 549], []]]
EM round[7] Prev: -264.22534, curr: -264.2198, delta: 0.005554199 [seconds: 0]

####  ACCOUNTING FOR EXPR VALUES
expr: 0.28147835 for path: [-1, 945, 451, 981, 549, 717, -2]
expr: 0.71852165 for path: [-1, 380, 982, 440, 451, 981, 549, 717, -2]

** Sum expr: 1.0


Expression values for each candidate path:
Expr=0.7185216546058655, sum_exp_frags=31.67262840270996, path: [-1, 380, 982, 440, 451, 981, 549, 717, -2]
Expr=0.2814783453941345, sum_exp_frags=11.327374458312988, path: [-1, 945, 451, 981, 549, 717, -2]
Keeping TOP isoform: [-1, 380, 982, 440, 451, 981, 549, 717, -2] as having _highest_ expr=0.71852165 and 100.0% dom. iso expr for gene.
Keeping isoform: [-1, 945, 451, 981, 549, 717, -2] as having expr=0.28147835 and 39.17465% dom. iso expr for gene.
EM_REDUCE retaining: [-1, 380, 982, 440, 451, 981, 549, 717, -2]
EM_REDUCE retaining: [-1, 945, 451, 981, 549, 717, -2]
FinalPath@AfterFiltering: [-1, 380, 982, 440, 451, 981, 549, 717, -2]
FinalPath@AfterFiltering: [-1, 945, 451, 981, 549, 717, -2]
Final Paths: 2

Final path reported: c1_g1_i1 len=402 path=[380:0-58 982:59-82 440:83-93 451:94-167 981:168-191 549:192-359 717:360-401] [-1, 380, 982, 440, 451, 981, 549, 717, -2]

Final path reported: c1_g1_i2 len=367 path=[945:0-58 451:59-132 981:133-156 549:157-324 717:325-366] [-1, 945, 451, 981, 549, 717, -2]
total number of paths reported = 2 from 2 components
Done
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   create-stamp debian/debhelper-build-stamp
   dh_prep
   debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
for target in Inchworm Chrysalis; do dh_auto_install \
                --sourcedirectory=${target} --builddirectory=${target}_build; done
	cd Inchworm_build && make -j2 install DESTDIR=/<<BUILDDIR>>/trinityrnaseq-2.15.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[2]: Entering directory '/<<PKGBUILDDIR>>/Inchworm_build'
/usr/bin/cmake -S/<<PKGBUILDDIR>>/Inchworm -B/<<PKGBUILDDIR>>/Inchworm_build --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 preinstall
make[3]: Entering directory '/<<PKGBUILDDIR>>/Inchworm_build'
make[3]: Nothing to be done for 'preinstall'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/Inchworm_build'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/bin/inchworm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/bin/FastaToDeBruijn
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/bin/fastaToKmerCoverageStats
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Inchworm_build'
	cd Chrysalis_build && make -j2 install DESTDIR=/<<BUILDDIR>>/trinityrnaseq-2.15.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[2]: Entering directory '/<<PKGBUILDDIR>>/Chrysalis_build'
/usr/bin/cmake -S/<<PKGBUILDDIR>>/Chrysalis -B/<<PKGBUILDDIR>>/Chrysalis_build --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 preinstall
make[3]: Entering directory '/<<PKGBUILDDIR>>/Chrysalis_build'
make[3]: Nothing to be done for 'preinstall'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/Chrysalis_build'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/bin/Chrysalis
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/bin/GraphFromFasta
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/bin/QuantifyGraph
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/bin/ReadsToTranscripts
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/bin/BubbleUpClustering
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/bin/CreateIwormFastaBundle
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Chrysalis_build'
for target in trinity-plugins/slclust trinity-plugins/scaffold_iworm_contigs trinity-plugins/bamsifter trinity-plugins/seqtk-trinity; do dh_auto_install \
                --sourcedirectory=${target}; done
	cd trinity-plugins/slclust && make -j2 install DESTDIR=/<<BUILDDIR>>/trinityrnaseq-2.15.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[2]: Entering directory '/<<PKGBUILDDIR>>/trinity-plugins/slclust'
X=`pwd`; \
for i in src; \
do echo '<<<' $i '>>>'; cd $X/$i; make install; done
<<< src >>>
make[3]: Entering directory '/<<PKGBUILDDIR>>/trinity-plugins/slclust/src'
mv slclust ../bin/
make[3]: Leaving directory '/<<PKGBUILDDIR>>/trinity-plugins/slclust/src'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/trinity-plugins/slclust'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_install-arch
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install -a
find debian/trinityrnaseq -name '*.p?' | xargs sed -i \
	's=^#!/usr/local/bin/perl=#!/usr/bin/perl='
chmod u+x \
	debian/trinityrnaseq/usr/lib/trinityrnaseq/Analysis/DifferentialExpression/pairwise_summaries/class_to_separate_fpkm_matrices.pl \
	debian/trinityrnaseq/usr/lib/trinityrnaseq/Analysis/FL_reconstruction_analysis/count_by_expression_quintile.pl \
	debian/trinityrnaseq/usr/lib/trinityrnaseq/util/misc/capture_orig_n_unmapped_reads.pl \
	debian/trinityrnaseq/usr/lib/trinityrnaseq/util/support_scripts/plugin_install_tests.sh \
	debian/trinityrnaseq/usr/lib/trinityrnaseq/util/support_scripts/trinity_install_tests.sh
chmod -R a-x debian/trinityrnaseq/usr/lib/trinityrnaseq/PerlLib/*.pm
chmod -R a-x debian/trinityrnaseq/usr/lib/trinityrnaseq/PerlLib/*/*.pm
find debian -name __pycache__ -type d | xargs rm -rf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   jh_installjavadoc
   dh_installdocs
   dh_installchangelogs
   dh_installman
   dh_perl
   dh_link
   jh_installlibs
   jh_classpath
   jh_manifest
   jh_exec
   jh_depends
   dh_strip_nondeterminism
   dh_compress
   debian/rules override_dh_fixperms
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_fixperms
find debian -name genwig.sh -exec chmod +x \{\} \;
for pl in `grep -Rl '#!/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \
    sed -i '1s?^#!/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' ${pl} ; \
done
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_missing
   dh_dwz -a
   dh_strip -a
   dh_makeshlibs -a
   dh_shlibdeps -a
   dh_installdeb
   dh_gencontrol
   dh_md5sums
   dh_builddeb
dpkg-deb: building package 'trinityrnaseq' in '../trinityrnaseq_2.15.1+dfsg-5_amd64.deb'.
dpkg-deb: building package 'trinityrnaseq-examples' in '../trinityrnaseq-examples_2.15.1+dfsg-5_amd64.deb'.
dpkg-deb: building package 'trinityrnaseq-dbgsym' in '../trinityrnaseq-dbgsym_2.15.1+dfsg-5_amd64.deb'.
 dpkg-genbuildinfo -O../trinityrnaseq_2.15.1+dfsg-5_amd64.buildinfo
 dpkg-genchanges -O../trinityrnaseq_2.15.1+dfsg-5_amd64.changes
dpkg-genchanges: info: not including original source code in upload
 dpkg-source -Zxz --after-build .
dpkg-buildpackage: info: binary and diff upload (original source NOT included)
--------------------------------------------------------------------------------
Build finished at 2024-08-05T23:53:22Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


trinityrnaseq_2.15.1+dfsg-5_amd64.changes:
------------------------------------------

Format: 1.8
Date: Sat, 23 Dec 2023 23:34:33 +0100
Source: trinityrnaseq
Binary: trinityrnaseq trinityrnaseq-dbgsym trinityrnaseq-examples
Architecture: source amd64
Version: 2.15.1+dfsg-5
Distribution: sid
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 trinityrnaseq - RNA-Seq De novo Assembly
 trinityrnaseq-examples - RNA-Seq De novo Assembly common example and testing files
Closes: 1059072
Changes:
 trinityrnaseq (2.15.1+dfsg-5) unstable; urgency=medium
 .
   * Team upload.
   * Add support for loong64
     Closes: #1059072
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 09901a94cb0210a7ce5f5115268e7dc8 14459 science optional trinityrnaseq_2.15.1+dfsg-5_amd64.buildinfo
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+------------------------------------------------------------------------------+
| Buildinfo                                                                    |
+------------------------------------------------------------------------------+

Format: 1.0
Source: trinityrnaseq
Binary: trinityrnaseq trinityrnaseq-dbgsym trinityrnaseq-examples
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Version: 2.15.1+dfsg-5
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Build-Origin: Debian
Build-Architecture: amd64
Build-Date: Mon, 05 Aug 2024 23:53:19 +0000
Build-Path: /<<PKGBUILDDIR>>
Build-Tainted-By:
 merged-usr-via-aliased-dirs
 usr-local-has-programs
Installed-Build-Depends:
 adduser (= 3.137),
 adwaita-icon-theme (= 46.0-1),
 at-spi2-common (= 2.52.0-1),
 autoconf (= 2.71-3),
 automake (= 1:1.16.5-1.3),
 autopoint (= 0.22.5-2),
 autotools-dev (= 20220109.1),
 base-files (= 13.5),
 base-passwd (= 3.6.4),
 bash (= 5.2.21-2.1),
 binfmt-support (= 2.2.2-7),
 binutils (= 2.43-1),
 binutils-common (= 2.43-1),
 binutils-x86-64-linux-gnu (= 2.43-1),
 bsdextrautils (= 2.40.2-4),
 bsdutils (= 1:2.40.2-4),
 build-essential (= 12.10),
 bzip2 (= 1.0.8-5.1),
 ca-certificates (= 20240203),
 ca-certificates-java (= 20240118),
 cmake (= 3.30.2-1),
 cmake-data (= 3.30.2-1),
 coreutils (= 9.4-3.1),
 cpp (= 4:14.1.0-2),
 cpp-13 (= 13.3.0-5),
 cpp-13-x86-64-linux-gnu (= 13.3.0-5),
 cpp-14 (= 14.2.0-1),
 cpp-14-x86-64-linux-gnu (= 14.2.0-1),
 cpp-x86-64-linux-gnu (= 4:14.1.0-2),
 dash (= 0.5.12-9),
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 dbus-bin (= 1.14.10-4+b1),
 dbus-daemon (= 1.14.10-4+b1),
 dbus-session-bus-common (= 1.14.10-4),
 dbus-system-bus-common (= 1.14.10-4),
 dbus-user-session (= 1.14.10-4+b1),
 dconf-gsettings-backend (= 0.40.0-4+b2),
 dconf-service (= 0.40.0-4+b2),
 dctrl-tools (= 2.24-3+b1),
 debconf (= 1.5.87),
 debhelper (= 13.16),
 debianutils (= 5.20),
 default-jdk (= 2:1.21-76),
 default-jdk-headless (= 2:1.21-76),
 default-jre (= 2:1.21-76),
 default-jre-headless (= 2:1.21-76),
 devscripts (= 2.23.7),
 dh-autoreconf (= 20),
 dh-strip-nondeterminism (= 1.14.0-1),
 diffutils (= 1:3.10-1),
 dirmngr (= 2.2.43-8),
 dpkg (= 1.22.11),
 dpkg-dev (= 1.22.11),
 dwz (= 0.15-1+b1),
 fastjar (= 2:0.98-7),
 file (= 1:5.45-3),
 findutils (= 4.10.0-2),
 fontconfig (= 2.15.0-1.1),
 fontconfig-config (= 2.15.0-1.1),
 fonts-dejavu-core (= 2.37-8),
 fonts-dejavu-mono (= 2.37-8),
 g++ (= 4:14.1.0-2),
 g++-14 (= 14.2.0-1),
 g++-14-x86-64-linux-gnu (= 14.2.0-1),
 g++-x86-64-linux-gnu (= 4:14.1.0-2),
 gcc (= 4:14.1.0-2),
 gcc-13 (= 13.3.0-5),
 gcc-13-base (= 13.3.0-5),
 gcc-13-x86-64-linux-gnu (= 13.3.0-5),
 gcc-14 (= 14.2.0-1),
 gcc-14-base (= 14.2.0-1),
 gcc-14-x86-64-linux-gnu (= 14.2.0-1),
 gcc-x86-64-linux-gnu (= 4:14.1.0-2),
 gettext (= 0.22.5-2),
 gettext-base (= 0.22.5-2),
 gnupg (= 2.2.43-8),
 gnupg-l10n (= 2.2.43-8),
 gpg (= 2.2.43-8),
 gpg-agent (= 2.2.43-8),
 gpgconf (= 2.2.43-8),
 gpgsm (= 2.2.43-8),
 gpgv (= 2.2.43-8),
 grep (= 3.11-4),
 groff-base (= 1.23.0-5),
 gtk-update-icon-cache (= 3.24.43-1),
 gzip (= 1.12-1.1),
 hicolor-icon-theme (= 0.18-1),
 hostname (= 3.23+nmu2),
 init-system-helpers (= 1.66),
 intltool-debian (= 0.35.0+20060710.6),
 jaligner (= 1.0+dfsg-11),
 jarwrapper (= 0.80),
 java-common (= 0.76),
 javahelper (= 0.80),
 libacl1 (= 2.3.2-2),
 libapparmor1 (= 3.1.7-1+b1),
 libarchive-zip-perl (= 1.68-1),
 libarchive13t64 (= 3.7.2-2.1),
 libasan8 (= 14.2.0-1),
 libasound2-data (= 1.2.12-1),
 libasound2t64 (= 1.2.12-1),
 libassuan0 (= 2.5.6-1+b1),
 libatinject-jsr330-api-java (= 1.0+ds1-5),
 libatk-bridge2.0-0t64 (= 2.52.0-1),
 libatk1.0-0t64 (= 2.52.0-1),
 libatomic1 (= 14.2.0-1),
 libatspi2.0-0t64 (= 2.52.0-1),
 libattr1 (= 1:2.5.2-1),
 libaudit-common (= 1:3.1.2-4),
 libaudit1 (= 1:3.1.2-4+b1),
 libavahi-client3 (= 0.8-13+b2),
 libavahi-common-data (= 0.8-13+b2),
 libavahi-common3 (= 0.8-13+b2),
 libb-hooks-op-check-perl (= 0.22-3+b1),
 libbinutils (= 2.43-1),
 libblkid1 (= 2.40.2-4),
 libbrotli-dev (= 1.1.0-2+b4),
 libbrotli1 (= 1.1.0-2+b4),
 libbsd0 (= 0.12.2-1),
 libbz2-1.0 (= 1.0.8-5.1),
 libc-bin (= 2.39-6),
 libc-dev-bin (= 2.39-6),
 libc6 (= 2.39-6),
 libc6-dev (= 2.39-6),
 libcairo-gobject2 (= 1.18.0-3+b1),
 libcairo2 (= 1.18.0-3+b1),
 libcap-ng0 (= 0.8.5-1+b1),
 libcap2 (= 1:2.66-5),
 libcc1-0 (= 14.2.0-1),
 libclass-method-modifiers-perl (= 2.15-1),
 libclass-xsaccessor-perl (= 1.19-4+b3),
 libclone-perl (= 0.46-1+b2),
 libcloudproviders0 (= 0.3.6-1),
 libcolord2 (= 1.4.7-1+b1),
 libcom-err2 (= 1.47.1-1),
 libcrypt-dev (= 1:4.4.36-4),
 libcrypt1 (= 1:4.4.36-4),
 libctf-nobfd0 (= 2.43-1),
 libctf0 (= 2.43-1),
 libcups2t64 (= 2.4.10-1),
 libcurl3t64-gnutls (= 8.9.1-1),
 libcurl4-gnutls-dev (= 8.9.1-1),
 libcurl4t64 (= 8.9.1-1),
 libdatrie1 (= 0.2.13-3),
 libdb5.3t64 (= 5.3.28+dfsg2-7),
 libdbus-1-3 (= 1.14.10-4+b1),
 libdconf1 (= 0.40.0-4+b2),
 libdebconfclient0 (= 0.272),
 libdebhelper-perl (= 13.16),
 libdeflate-dev (= 1.20-1),
 libdeflate0 (= 1.20-1),
 libdevel-callchecker-perl (= 0.009-1),
 libdpkg-perl (= 1.22.11),
 libdrm-amdgpu1 (= 2.4.122-1),
 libdrm-common (= 2.4.122-1),
 libdrm-intel1 (= 2.4.122-1),
 libdrm-radeon1 (= 2.4.122-1),
 libdrm2 (= 2.4.122-1),
 libdynaloader-functions-perl (= 0.004-1),
 libedit2 (= 3.1-20240517-1),
 libelf1t64 (= 0.191-2),
 libencode-locale-perl (= 1.05-3),
 libepoxy0 (= 1.5.10-1+b2),
 liberror-prone-java (= 2.18.0-1),
 libevent-2.1-7t64 (= 2.1.12-stable-10),
 libexpat1 (= 2.6.2-1),
 libffi8 (= 3.4.6-1),
 libfile-dirlist-perl (= 0.05-3),
 libfile-homedir-perl (= 1.006-2),
 libfile-listing-perl (= 6.16-1),
 libfile-stripnondeterminism-perl (= 1.14.0-1),
 libfile-touch-perl (= 0.12-2),
 libfile-which-perl (= 1.27-2),
 libfontconfig1 (= 2.15.0-1.1),
 libfreetype6 (= 2.13.2+dfsg-1+b4),
 libfribidi0 (= 1.0.15-1),
 libgcc-13-dev (= 13.3.0-5),
 libgcc-14-dev (= 14.2.0-1),
 libgcc-s1 (= 14.2.0-1),
 libgcrypt20 (= 1.11.0-5),
 libgdbm-compat4t64 (= 1.23-6),
 libgdbm6t64 (= 1.23-6),
 libgdk-pixbuf-2.0-0 (= 2.42.12+dfsg-1),
 libgdk-pixbuf2.0-common (= 2.42.12+dfsg-1),
 libgetopt-java (= 1.0.14+dfsg-6),
 libgif7 (= 5.2.2-1),
 libgl1 (= 1.7.0-1+b1),
 libgl1-mesa-dri (= 24.1.5-3),
 libglapi-mesa (= 24.1.5-3),
 libglib2.0-0t64 (= 2.81.1-3),
 libglvnd0 (= 1.7.0-1+b1),
 libglx-mesa0 (= 24.1.5-3),
 libglx0 (= 1.7.0-1+b1),
 libgmp-dev (= 2:6.3.0+dfsg-2+b1),
 libgmp10 (= 2:6.3.0+dfsg-2+b1),
 libgmpxx4ldbl (= 2:6.3.0+dfsg-2+b1),
 libgnutls-dane0t64 (= 3.8.6-2),
 libgnutls-openssl27t64 (= 3.8.6-2),
 libgnutls28-dev (= 3.8.6-2),
 libgnutls30t64 (= 3.8.6-2),
 libgomp1 (= 14.2.0-1),
 libgpg-error0 (= 1.50-2),
 libgprofng0 (= 2.43-1),
 libgraphite2-3 (= 1.3.14-2),
 libgssapi-krb5-2 (= 1.21.3-3),
 libgtk-3-0t64 (= 3.24.43-1),
 libgtk-3-common (= 3.24.43-1),
 libguava-java (= 32.0.1-1),
 libharfbuzz0b (= 8.3.0-2+b1),
 libhogweed6t64 (= 3.10-1),
 libhtml-parser-perl (= 3.83-1),
 libhtml-tagset-perl (= 3.24-1),
 libhtml-tree-perl (= 5.07-3),
 libhts-dev (= 1.20+ds-1),
 libhts3t64 (= 1.20+ds-1),
 libhtscodecs2 (= 1.6.0-1+b1),
 libhttp-cookies-perl (= 6.11-1),
 libhttp-date-perl (= 6.06-1),
 libhttp-message-perl (= 6.46-1),
 libhttp-negotiate-perl (= 6.01-2),
 libhwasan0 (= 14.2.0-1),
 libicu72 (= 72.1-5),
 libidn2-0 (= 2.3.7-2),
 libidn2-dev (= 2.3.7-2),
 libimport-into-perl (= 1.002005-2),
 libio-html-perl (= 1.004-3),
 libio-pty-perl (= 1:1.20-1+b1),
 libio-socket-ssl-perl (= 2.088-1),
 libipc-run-perl (= 20231003.0-2),
 libisl23 (= 0.26-3+b2),
 libitm1 (= 14.2.0-1),
 libjansson4 (= 2.14-2+b2),
 libjbig0 (= 2.1-6.1+b1),
 libjpeg62-turbo (= 1:2.1.5-3),
 libjs-jquery (= 3.6.1+dfsg+~3.5.14-1),
 libjsoncpp25 (= 1.9.5-6+b2),
 libjsr305-java (= 0.1~+svn49-11),
 libjung-free-java (= 2.1.1-2),
 libk5crypto3 (= 1.21.3-3),
 libkeyutils1 (= 1.6.3-3),
 libkrb5-3 (= 1.21.3-3),
 libkrb5support0 (= 1.21.3-3),
 libksba8 (= 1.6.7-2),
 liblcms2-2 (= 2.14-2+b1),
 libldap-2.5-0 (= 2.5.18+dfsg-2),
 liblerc4 (= 4.0.0+ds-4+b1),
 libllvm17t64 (= 1:17.0.6-15),
 liblsan0 (= 14.2.0-1),
 liblwp-mediatypes-perl (= 6.04-2),
 liblwp-protocol-https-perl (= 6.14-1),
 liblz4-1 (= 1.9.4-3),
 liblzma-dev (= 5.6.2-2),
 liblzma5 (= 5.6.2-2),
 libmagic-mgc (= 1:5.45-3),
 libmagic1t64 (= 1:5.45-3),
 libmd0 (= 1.1.0-2),
 libmodule-runtime-perl (= 0.016-2),
 libmoo-perl (= 2.005005-1),
 libmount1 (= 2.40.2-4),
 libmpc3 (= 1.3.1-1+b2),
 libmpfr6 (= 4.2.1-1+b1),
 libncursesw6 (= 6.5-2),
 libnet-http-perl (= 6.23-1),
 libnet-ssleay-perl (= 1.94-1+b1),
 libnettle8t64 (= 3.10-1),
 libnghttp2-14 (= 1.62.1-2),
 libnghttp2-dev (= 1.62.1-2),
 libnghttp3-9 (= 1.4.0-1),
 libnghttp3-dev (= 1.4.0-1),
 libngtcp2-16 (= 1.6.0-1),
 libngtcp2-crypto-gnutls-dev (= 1.6.0-1),
 libngtcp2-crypto-gnutls8 (= 1.6.0-1),
 libngtcp2-dev (= 1.6.0-1),
 libnpth0t64 (= 1.6-3.1),
 libnspr4 (= 2:4.35-1.1+b1),
 libnss3 (= 2:3.102-1),
 libp11-kit-dev (= 0.25.5-2),
 libp11-kit0 (= 0.25.5-2),
 libpam-modules (= 1.5.3-7),
 libpam-modules-bin (= 1.5.3-7),
 libpam-runtime (= 1.5.3-7),
 libpam-systemd (= 256.4-2),
 libpam0g (= 1.5.3-7),
 libpango-1.0-0 (= 1.54.0+ds-1),
 libpangocairo-1.0-0 (= 1.54.0+ds-1),
 libpangoft2-1.0-0 (= 1.54.0+ds-1),
 libparams-classify-perl (= 0.015-2+b3),
 libpciaccess0 (= 0.17-3+b1),
 libpcre2-8-0 (= 10.42-4+b1),
 libpcsclite1 (= 2.3.0-1),
 libperl5.38t64 (= 5.38.2-5),
 libpipeline1 (= 1.5.7-2),
 libpixman-1-0 (= 0.42.2-1+b1),
 libpkgconf3 (= 1.8.1-3),
 libpng16-16t64 (= 1.6.43-5),
 libproc2-0 (= 2:4.0.4-5),
 libpsl-dev (= 0.21.2-1.1),
 libpsl5t64 (= 0.21.2-1.1),
 libpython3-stdlib (= 3.12.4-1),
 libpython3.12-minimal (= 3.12.4-3),
 libpython3.12-stdlib (= 3.12.4-3),
 libquadmath0 (= 14.2.0-1),
 libreadline8t64 (= 8.2-4),
 librhash0 (= 1.4.3-3+b1),
 librole-tiny-perl (= 2.002004-1),
 librtmp-dev (= 2.4+20151223.gitfa8646d.1-2+b4),
 librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b4),
 libsasl2-2 (= 2.1.28+dfsg1-6),
 libsasl2-modules-db (= 2.1.28+dfsg1-6),
 libseccomp2 (= 2.5.5-1+b1),
 libselinux1 (= 3.5-2+b3),
 libsemanage-common (= 3.5-1),
 libsemanage2 (= 3.5-1+b4),
 libsensors-config (= 1:3.6.0-10),
 libsensors5 (= 1:3.6.0-10),
 libsepol2 (= 3.5-2+b1),
 libsframe1 (= 2.43-1),
 libsharpyuv0 (= 1.4.0-0.1),
 libsmartcols1 (= 2.40.2-4),
 libsqlite3-0 (= 3.46.0-1),
 libssh2-1-dev (= 1.11.0-7),
 libssh2-1t64 (= 1.11.0-7),
 libssl-dev (= 3.3.1-2),
 libssl3t64 (= 3.3.1-2),
 libstdc++-14-dev (= 14.2.0-1),
 libstdc++6 (= 14.2.0-1),
 libsub-quote-perl (= 2.006008-1),
 libsystemd-shared (= 256.4-2),
 libsystemd0 (= 256.4-2),
 libtasn1-6 (= 4.19.0-3+b2),
 libtasn1-6-dev (= 4.19.0-3+b2),
 libthai-data (= 0.1.29-2),
 libthai0 (= 0.1.29-2),
 libtiff6 (= 4.5.1+git230720-4),
 libtimedate-perl (= 2.3300-2),
 libtinfo6 (= 6.5-2),
 libtool (= 2.4.7-7),
 libtry-tiny-perl (= 0.31-2),
 libtsan2 (= 14.2.0-1),
 libubsan1 (= 14.2.0-1),
 libuchardet0 (= 0.0.8-1+b1),
 libudev1 (= 256.4-2),
 libunbound8 (= 1.20.0-1+b1),
 libunistring5 (= 1.2-1),
 liburi-perl (= 5.28-1),
 libuuid1 (= 2.40.2-4),
 libuv1t64 (= 1.48.0-5),
 libvulkan1 (= 1.3.283.0-1),
 libwayland-client0 (= 1.23.0-1),
 libwayland-cursor0 (= 1.23.0-1),
 libwayland-egl1 (= 1.23.0-1),
 libwebp7 (= 1.4.0-0.1),
 libwww-perl (= 6.77-1),
 libwww-robotrules-perl (= 6.02-1),
 libx11-6 (= 2:1.8.7-1+b1),
 libx11-data (= 2:1.8.7-1),
 libx11-xcb1 (= 2:1.8.7-1+b1),
 libxau6 (= 1:1.0.9-1+b1),
 libxcb-dri2-0 (= 1.17.0-2),
 libxcb-dri3-0 (= 1.17.0-2),
 libxcb-glx0 (= 1.17.0-2),
 libxcb-present0 (= 1.17.0-2),
 libxcb-randr0 (= 1.17.0-2),
 libxcb-render0 (= 1.17.0-2),
 libxcb-shm0 (= 1.17.0-2),
 libxcb-sync1 (= 1.17.0-2),
 libxcb-xfixes0 (= 1.17.0-2),
 libxcb1 (= 1.17.0-2),
 libxcomposite1 (= 1:0.4.5-1+b1),
 libxcursor1 (= 1:1.2.2-1),
 libxdamage1 (= 1:1.1.6-1+b1),
 libxdmcp6 (= 1:1.1.2-3+b1),
 libxext6 (= 2:1.3.4-1+b1),
 libxfixes3 (= 1:6.0.0-2+b1),
 libxi6 (= 2:1.8.1-1),
 libxinerama1 (= 2:1.1.4-3+b1),
 libxkbcommon0 (= 1.6.0-1+b1),
 libxml2 (= 2.12.7+dfsg-3+b1),
 libxrandr2 (= 2:1.5.4-1),
 libxrender1 (= 1:0.9.10-1.1+b1),
 libxshmfence1 (= 1.3-1+b1),
 libxtst6 (= 2:1.2.3-1.1+b1),
 libxxf86vm1 (= 1:1.1.4-1+b2),
 libxxhash0 (= 0.8.2-2+b1),
 libz3-4 (= 4.8.12-3.1+b2),
 libzstd-dev (= 1.5.6+dfsg-1),
 libzstd1 (= 1.5.6+dfsg-1),
 linux-libc-dev (= 6.10.3-1),
 login.defs (= 1:4.16.0-3),
 m4 (= 1.4.19-4),
 make (= 4.3-4.1),
 man-db (= 2.12.1-2),
 mawk (= 1.3.4.20240622-2),
 media-types (= 10.1.0),
 mount (= 2.40.2-4),
 ncurses-base (= 6.5-2),
 ncurses-bin (= 6.5-2),
 netbase (= 6.4),
 nettle-dev (= 3.10-1),
 openjdk-21-jdk (= 21.0.4+7-2),
 openjdk-21-jdk-headless (= 21.0.4+7-2),
 openjdk-21-jre (= 21.0.4+7-2),
 openjdk-21-jre-headless (= 21.0.4+7-2),
 openssl (= 3.3.1-2),
 passwd (= 1:4.16.0-3),
 patch (= 2.7.6-7),
 patchutils (= 0.4.2-1),
 perl (= 5.38.2-5),
 perl-base (= 5.38.2-5),
 perl-modules-5.38 (= 5.38.2-5),
 perl-openssl-defaults (= 7+b2),
 pinentry-curses (= 1.2.1-3+b2),
 pkgconf (= 1.8.1-3),
 pkgconf-bin (= 1.8.1-3),
 po-debconf (= 1.0.21+nmu1),
 procps (= 2:4.0.4-5),
 python3 (= 3.12.4-1),
 python3-minimal (= 3.12.4-1),
 python3.12 (= 3.12.4-3),
 python3.12-minimal (= 3.12.4-3),
 readline-common (= 8.2-4),
 rpcsvc-proto (= 1.4.3-1),
 sed (= 4.9-2),
 sensible-utils (= 0.0.24),
 shared-mime-info (= 2.4-5),
 systemd (= 256.4-2),
 systemd-sysv (= 256.4-2),
 sysvinit-utils (= 3.09-2),
 tar (= 1.35+dfsg-3),
 tzdata (= 2024a-4),
 usr-is-merged (= 39),
 util-linux (= 2.40.2-4),
 wdiff (= 1.2.2-6),
 x11-common (= 1:7.7+23.1),
 xkb-data (= 2.42-1),
 xz-utils (= 5.6.2-2),
 zlib1g (= 1:1.3.dfsg+really1.3.1-1),
 zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1)
Environment:
 DEB_BUILD_OPTIONS="parallel=2"
 LANG="C.UTF-8"
 LC_COLLATE="C.UTF-8"
 LC_CTYPE="C.UTF-8"
 LD_LIBRARY_PATH="/usr/lib/libeatmydata"
 SOURCE_DATE_EPOCH="1703370873"


+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


trinityrnaseq-dbgsym_2.15.1+dfsg-5_amd64.deb
--------------------------------------------

 new Debian package, version 2.0.
 size 11029092 bytes: control archive=1196 bytes.
     900 bytes,    12 lines      control
    1468 bytes,    14 lines      md5sums
 Package: trinityrnaseq-dbgsym
 Source: trinityrnaseq
 Version: 2.15.1+dfsg-5
 Auto-Built-Package: debug-symbols
 Architecture: amd64
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 11472
 Depends: trinityrnaseq (= 2.15.1+dfsg-5)
 Section: debug
 Priority: optional
 Description: debug symbols for trinityrnaseq
 Build-Ids: 0cf2b35aae7f2c9bb6d91d1dbb2a33c2b3623bca 0e0ba926002df90a25f2681f44d65caf286956a4 29e96a88bb35b01c1fefe84cb3d7743b909f2d86 360e68ec83a5acd3be0c82f7b5e6ba506d46cec9 4ce3ebf44b58a44f9d68c843584e1c4a7074bb78 6218bb2504c9a3f5adae6cad9c138ce1956f60ab 8de0b2a6fc529b9aa3a04fb08fc122e79aa28e6e 94d045283ccfc06f5938cf1700e44ba86beecb1a b0ecbc014aeb08ba4c8e9fd8f7d6f29890a6db46 bea08cfe95e7521faaa9899186ab2e0c0befd927 c9a2835de30a529a8c9d9eb9739465e19a7ec81a ebbbffb1110be4278f039b01eeafa4bd74460bcf f94c9481a91832d783ff641a73d95715edee8b34

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lrwxrwxrwx root/root         0 2023-12-23 22:34 ./usr/share/doc/trinityrnaseq-dbgsym -> trinityrnaseq


trinityrnaseq-examples_2.15.1+dfsg-5_amd64.deb
----------------------------------------------

 new Debian package, version 2.0.
 size 299849540 bytes: control archive=11732 bytes.
    1059 bytes,    22 lines      control
   55148 bytes,   410 lines      md5sums
 Package: trinityrnaseq-examples
 Source: trinityrnaseq
 Version: 2.15.1+dfsg-5
 Architecture: amd64
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 449931
 Depends: perl:any, r-base-core
 Recommends: trinityrnaseq
 Section: science
 Priority: optional
 Homepage: https://github.com/trinityrnaseq/trinityrnaseq
 Description: RNA-Seq De novo Assembly common example and testing files
  Trinity represents a novel method for the efficient and robust de novo
  reconstruction of transcriptomes from RNA-seq data. Trinity combines three
  independent software modules: Inchworm, Chrysalis, and Butterfly, applied
  sequentially to process large volumes of RNA-seq reads. Trinity partitions
  the sequence data into many individual de Bruijn graphs, each representing the
  transcriptional complexity at a given gene or locus, and then processes
  each graph independently to extract full-length splicing isoforms and to tease
  apart transcripts derived from paralogous genes.
  .
  This package contains testing & example files.

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trinityrnaseq_2.15.1+dfsg-5_amd64.deb
-------------------------------------

 new Debian package, version 2.0.
 size 1736048 bytes: control archive=16780 bytes.
    1722 bytes,    20 lines      control
   52338 bytes,   522 lines      md5sums
 Package: trinityrnaseq
 Version: 2.15.1+dfsg-5
 Architecture: amd64
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 7515
 Depends: libc6 (>= 2.38), libgcc-s1 (>= 3.0), libgomp1 (>= 6), libhts3t64 (>= 1.17), libstdc++6 (>= 14), zlib1g (>= 1:1.1.4), perl:any, jaligner, libgetopt-java, libjung-free-java, bowtie, bowtie2, libwww-perl, default-jre-headless, samtools, jellyfish, r-base-core, rsem, berkeley-express, trimmomatic, parafly, ncbi-blast+, python3, liburi-perl, python3-htseq, subread, kallisto
 Recommends: curl, trinityrnaseq-examples, picard-tools, tabix, gmap, salmon, rna-star, hisat2, r-cran-tidyverse, r-cran-readr, r-bioc-edger, r-bioc-deseq2, r-bioc-rots, r-cran-cluster, r-cran-fastcluster, r-bioc-ctc, r-bioc-goseq, r-cran-goplot, r-cran-gplots, r-bioc-dexseq, r-cran-ape, r-bioc-biobase, r-bioc-qvalue, r-cran-argparse, r-cran-kernsmooth, python3-numpy, python3-hisat2
 Suggests: collectl, transdecoder, r-bioc-tximport, r-bioc-tximportdata
 Section: science
 Priority: optional
 Homepage: https://github.com/trinityrnaseq/trinityrnaseq
 Description: RNA-Seq De novo Assembly
  Trinity represents a novel method for the efficient and robust de novo
  reconstruction of transcriptomes from RNA-seq data. Trinity combines three
  independent software modules: Inchworm, Chrysalis, and Butterfly, applied
  sequentially to process large volumes of RNA-seq reads. Trinity partitions
  the sequence data into many individual de Bruijn graphs, each representing the
  transcriptional complexity at a given gene or locus, and then processes
  each graph independently to extract full-length splicing isoforms and to tease
  apart transcripts derived from paralogous genes.

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| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: amd64
Build Type: full
Build-Space: 1435880
Build-Time: 318
Distribution: sid
Host Architecture: amd64
Install-Time: 31
Job: /srv/debomatic/incoming/trinityrnaseq_2.15.1+dfsg-5.dsc
Machine Architecture: amd64
Package: trinityrnaseq
Package-Time: 359
Source-Version: 2.15.1+dfsg-5
Space: 1435880
Status: successful
Version: 2.15.1+dfsg-5
--------------------------------------------------------------------------------
Finished at 2024-08-05T23:53:22Z
Build needed 00:05:59, 1435880k disk space