sbuild (Debian sbuild) 0.85.9 (29 May 2024) on carme.larted.org.uk +==============================================================================+ | libtfbs-perl 0.7.1+ds-3 (amd64) Sun, 02 Jun 2024 14:46:10 +0000 | +==============================================================================+ Package: libtfbs-perl Version: 0.7.1+ds-3 Source Version: 0.7.1+ds-3 Distribution: sid Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: full perl: warning: Setting locale failed. perl: warning: Please check that your locale settings: LANGUAGE = "en_GB:en", LC_ALL = (unset), LANG = "en_GB.UTF-8" are supported and installed on your system. perl: warning: Falling back to the standard locale ("C"). I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-debomatic-6edd16fe-bdd8-4bbd-98d4-b8f864b089c5' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup libtfbs-perl_0.7.1+ds-3 sid amd64 -------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup libtfbs-perl_0.7.1+ds-3 sid amd64'. Finished processing commands. -------------------------------------------------------------------------------- I: NOTICE: Log filtering will replace 'build/libtfbs-perl-8ASRqE/resolver-3uORTP' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian unstable InRelease [198 kB] Get:2 http://localhost:3142/debian sid InRelease [198 kB] Get:3 http://localhost:3142/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian unstable/main amd64 Packages T-2024-06-02-1406.32-F-2024-06-02-1406.32.pdiff [80.8 kB] Get:5 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian unstable/main amd64 Packages T-2024-06-02-1406.32-F-2024-06-02-1406.32.pdiff [80.8 kB] Get:6 http://localhost:3142/debian sid/main Sources T-2024-06-02-1406.32-F-2024-06-02-1406.32.pdiff [17.8 kB] Get:6 http://localhost:3142/debian sid/main Sources T-2024-06-02-1406.32-F-2024-06-02-1406.32.pdiff [17.8 kB] Fetched 622 kB in 6s (105 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- /srv/debomatic/incoming/libtfbs-perl_0.7.1+ds-3.dsc exists in /srv/debomatic/incoming; copying to chroot I: NOTICE: Log filtering will replace 'build/libtfbs-perl-8ASRqE/libtfbs-perl-0.7.1+ds' with '<>' I: NOTICE: Log filtering will replace 'build/libtfbs-perl-8ASRqE' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-sequence-pdl, perl, pdl (>= 1:2.016), bioperl, libwww-perl, libdbi-perl, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 13), dh-sequence-pdl, perl, pdl (>= 1:2.016), bioperl, libwww-perl, libdbi-perl, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [693 B] Get:5 copy:/<>/apt_archive ./ Packages [725 B] Fetched 2027 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bioperl bsdextrautils ca-certificates debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file fontconfig-config fonts-dejavu-core fonts-dejavu-mono gettext gettext-base groff-base intltool-debian libabsl20230802 libaec0 libalgorithm-diff-perl libaom3 libarchive-zip-perl libavif16 libbio-perl-perl libbrotli1 libbsd0 libcapture-tiny-perl libclass-data-inheritable-perl libclone-perl libcom-err2 libcurl3t64-gnutls libdata-stag-perl libdav1d7 libdbi-perl libde265-0 libdebhelper-perl libdeflate0 libdevel-stacktrace-perl libelf1t64 libencode-locale-perl libexception-class-perl libexpat1 libfakeroot libfile-listing-perl libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1 libfreetype6 libgav1-1 libgd3 libgfortran5 libgsl27 libgslcblas0 libgssapi-krb5-2 libhdf4-0-alt libheif-plugin-dav1d libheif-plugin-libde265 libheif1 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu72 libio-html-perl libio-socket-ssl-perl libio-string-perl libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblerc4 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1t64 libncurses6 libnet-http-perl libnet-ssleay-perl libnghttp2-14 libpipeline1 libpng16-16t64 libpod-parser-perl libproj25 libpsl5t64 librav1e0 librtmp1 libsharpyuv0 libssh2-1t64 libsub-uplevel-perl libsvtav1enc1d1 libsz2 libterm-readkey-perl libtest-deep-perl libtest-differences-perl libtest-exception-perl libtest-most-perl libtest-warn-perl libtext-diff-perl libtiff6 libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libwebp7 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxml2 libxpm4 libyuv0 m4 man-db netbase openssl pdl perl-openssl-defaults po-debconf proj-data sensible-utils Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libxml-sax-expatxs-perl libmldbm-perl libnet-daemon-perl libsql-statement-perl libgd-tools gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html krb5-doc krb5-user libhdf4-alt-dev hdf4-tools libheif-plugin-ffmpegdec libheif-plugin-jpegdec libheif-plugin-jpegenc libheif-plugin-j2kdec libheif-plugin-j2kenc libheif-plugin-rav1e libheif-plugin-svtenc libdata-dump-perl libcrypt-ssleay-perl proj-bin libtool-doc gfortran | fortran95-compiler gcj-jdk libsub-name-perl libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl m4-doc apparmor less www-browser doc-base libastro-fits-header-perl libdevel-repl-perl libextutils-f77-perl libfile-map-perl libgl1-mesa-glx | libgl1 libinline-perl libinline-c-perl libmodule-compile-perl libopengl-perl netpbm | imagemagick libmail-box-perl Recommended packages: bioperl-run perl-doc libcache-cache-perl libbio-perl-run-perl libgd-gd2-perl libapache-dbi-perl libxml-simple-perl libyaml-perl libace-perl liblist-moreutils-perl libxml-twig-perl libset-scalar-perl curl | wget | lynx libalgorithm-diff-xs-perl bioperl-run | libbio-perl-run-perl libalgorithm-munkres-perl libarray-compare-perl libbio-asn1-entrezgene-perl libconvert-binary-c-perl libdbd-sqlite3-perl libdbd-mysql-perl libdbd-pg-perl libgd-perl libgraph-perl libgraphviz-perl libhtml-tableextract-perl libpostscript-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-perl libsvg-graph-perl libxml-dom-xpath-perl libxml-parser-perl libxml-sax-perl libxml-sax-writer-perl libxml-writer-perl libxml-libxml-perl perl-tk libgd-gd2-perl | libgd-gd2-noxpm-perl libxml-libxslt-perl libmldbm-perl libxml-perl libarchive-cpio-perl libheif-plugin-aomenc libheif-plugin-x265 libhtml-format-perl libio-compress-brotli-perl krb5-locales libgpm2 publicsuffix libltdl-dev libdata-dump-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl libpgplot-perl libterm-readline-gnu-perl | libterm-readline-perl-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bioperl bsdextrautils ca-certificates debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file fontconfig-config fonts-dejavu-core fonts-dejavu-mono gettext gettext-base groff-base intltool-debian libabsl20230802 libaec0 libalgorithm-diff-perl libaom3 libarchive-zip-perl libavif16 libbio-perl-perl libbrotli1 libbsd0 libcapture-tiny-perl libclass-data-inheritable-perl libclone-perl libcom-err2 libcurl3t64-gnutls libdata-stag-perl libdav1d7 libdbi-perl libde265-0 libdebhelper-perl libdeflate0 libdevel-stacktrace-perl libelf1t64 libencode-locale-perl libexception-class-perl libexpat1 libfakeroot libfile-listing-perl libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1 libfreetype6 libgav1-1 libgd3 libgfortran5 libgsl27 libgslcblas0 libgssapi-krb5-2 libhdf4-0-alt libheif-plugin-dav1d libheif-plugin-libde265 libheif1 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu72 libio-html-perl libio-socket-ssl-perl libio-string-perl libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblerc4 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1t64 libncurses6 libnet-http-perl libnet-ssleay-perl libnghttp2-14 libpipeline1 libpng16-16t64 libpod-parser-perl libproj25 libpsl5t64 librav1e0 librtmp1 libsharpyuv0 libssh2-1t64 libsub-uplevel-perl libsvtav1enc1d1 libsz2 libterm-readkey-perl libtest-deep-perl libtest-differences-perl libtest-exception-perl libtest-most-perl libtest-warn-perl libtext-diff-perl libtiff6 libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libwebp7 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxml2 libxpm4 libyuv0 m4 man-db netbase openssl pdl perl-openssl-defaults po-debconf proj-data sbuild-build-depends-main-dummy sensible-utils 0 upgraded, 133 newly installed, 0 to remove and 0 not upgraded. Need to get 54.8 MB of archives. After this operation, 191 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [924 B] Get:2 http://localhost:3142/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get:3 http://localhost:3142/debian unstable/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get:4 http://localhost:3142/debian unstable/main amd64 openssl amd64 3.2.1-3 [1360 kB] Get:5 http://localhost:3142/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get:6 http://localhost:3142/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get:7 http://localhost:3142/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get:8 http://localhost:3142/debian unstable/main amd64 file amd64 1:5.45-3 [42.9 kB] Get:9 http://localhost:3142/debian unstable/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get:10 http://localhost:3142/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get:11 http://localhost:3142/debian unstable/main amd64 groff-base amd64 1.23.0-4 [1180 kB] Get:12 http://localhost:3142/debian unstable/main amd64 bsdextrautils amd64 2.40.1-4 [95.7 kB] Get:13 http://localhost:3142/debian unstable/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get:14 http://localhost:3142/debian unstable/main amd64 man-db amd64 2.12.1-1 [1411 kB] Get:15 http://localhost:3142/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get:16 http://localhost:3142/debian unstable/main amd64 autoconf all 2.71-3 [332 kB] Get:17 http://localhost:3142/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:18 http://localhost:3142/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:19 http://localhost:3142/debian unstable/main amd64 autopoint all 0.21-14 [496 kB] Get:20 http://localhost:3142/debian unstable/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:21 http://localhost:3142/debian unstable/main amd64 libdata-stag-perl all 0.14-3 [448 kB] Get:22 http://localhost:3142/debian unstable/main amd64 libbio-perl-perl all 1.7.8-1 [2603 kB] Get:23 http://localhost:3142/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:24 http://localhost:3142/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:25 http://localhost:3142/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:26 http://localhost:3142/debian unstable/main amd64 libtest-deep-perl all 1.204-1 [52.9 kB] Get:27 http://localhost:3142/debian unstable/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:28 http://localhost:3142/debian unstable/main amd64 libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get:29 http://localhost:3142/debian unstable/main amd64 libtext-diff-perl all 1.45-2 [27.2 kB] Get:30 http://localhost:3142/debian unstable/main amd64 libtest-differences-perl all 0.71-1 [17.9 kB] Get:31 http://localhost:3142/debian unstable/main amd64 libsub-uplevel-perl all 0.2800-3 [14.0 kB] Get:32 http://localhost:3142/debian unstable/main amd64 libtest-exception-perl all 0.43-3 [16.9 kB] Get:33 http://localhost:3142/debian unstable/main amd64 libtest-warn-perl all 0.37-2 [14.5 kB] Get:34 http://localhost:3142/debian unstable/main amd64 libtest-most-perl all 0.38-1 [25.1 kB] Get:35 http://localhost:3142/debian unstable/main amd64 bioperl all 1.7.8-1 [246 kB] Get:36 http://localhost:3142/debian unstable/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get:37 http://localhost:3142/debian unstable/main amd64 libtool all 2.4.7-7 [517 kB] Get:38 http://localhost:3142/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:39 http://localhost:3142/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:40 http://localhost:3142/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get:41 http://localhost:3142/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get:42 http://localhost:3142/debian unstable/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get:43 http://localhost:3142/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:44 http://localhost:3142/debian unstable/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get:45 http://localhost:3142/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg-2 [670 kB] Get:46 http://localhost:3142/debian unstable/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get:47 http://localhost:3142/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:48 http://localhost:3142/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:49 http://localhost:3142/debian unstable/main amd64 debhelper all 13.15.3 [901 kB] Get:50 http://localhost:3142/debian unstable/main amd64 libfakeroot amd64 1.34-1 [28.9 kB] Get:51 http://localhost:3142/debian unstable/main amd64 fakeroot amd64 1.34-1 [74.0 kB] Get:52 http://localhost:3142/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get:53 http://localhost:3142/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get:54 http://localhost:3142/debian unstable/main amd64 fontconfig-config amd64 2.15.0-1.1 [317 kB] Get:55 http://localhost:3142/debian unstable/main amd64 libabsl20230802 amd64 20230802.1-4 [464 kB] Get:56 http://localhost:3142/debian unstable/main amd64 libaec0 amd64 1.1.3-1 [23.4 kB] Get:57 http://localhost:3142/debian unstable/main amd64 libaom3 amd64 3.8.2-2 [1869 kB] Get:58 http://localhost:3142/debian unstable/main amd64 libdav1d7 amd64 1.4.2-1 [551 kB] Get:59 http://localhost:3142/debian unstable/main amd64 libgav1-1 amd64 0.19.0-2+b1 [351 kB] Get:60 http://localhost:3142/debian unstable/main amd64 librav1e0 amd64 0.7.1-2 [900 kB] Get:61 http://localhost:3142/debian unstable/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [113 kB] Get:62 http://localhost:3142/debian unstable/main amd64 libsvtav1enc1d1 amd64 1.7.0+dfsg-2+b1 [2169 kB] Get:63 http://localhost:3142/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3 [167 kB] Get:64 http://localhost:3142/debian unstable/main amd64 libyuv0 amd64 0.0.1888.20240509-4 [170 kB] Get:65 http://localhost:3142/debian unstable/main amd64 libavif16 amd64 1.0.4-3 [106 kB] Get:66 http://localhost:3142/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB] Get:67 http://localhost:3142/debian unstable/main amd64 libbsd0 amd64 0.12.2-1 [131 kB] Get:68 http://localhost:3142/debian unstable/main amd64 libclone-perl amd64 0.46-1+b2 [13.7 kB] Get:69 http://localhost:3142/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1 [22.9 kB] Get:70 http://localhost:3142/debian unstable/main amd64 libkrb5support0 amd64 1.20.1-6+b1 [33.3 kB] Get:71 http://localhost:3142/debian unstable/main amd64 libk5crypto3 amd64 1.20.1-6+b1 [79.8 kB] Get:72 http://localhost:3142/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get:73 http://localhost:3142/debian unstable/main amd64 libkrb5-3 amd64 1.20.1-6+b1 [333 kB] Get:74 http://localhost:3142/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.20.1-6+b1 [135 kB] Get:75 http://localhost:3142/debian unstable/main amd64 libnghttp2-14 amd64 1.61.0-1+b1 [75.6 kB] Get:76 http://localhost:3142/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get:77 http://localhost:3142/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get:78 http://localhost:3142/debian unstable/main amd64 libssh2-1t64 amd64 1.11.0-5 [215 kB] Get:79 http://localhost:3142/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.8.0-1 [434 kB] Get:80 http://localhost:3142/debian unstable/main amd64 libdbi-perl amd64 1.643-4+b2 [755 kB] Get:81 http://localhost:3142/debian unstable/main amd64 libde265-0 amd64 1.0.15-1+b1 [187 kB] Get:82 http://localhost:3142/debian unstable/main amd64 libdeflate0 amd64 1.20-1 [46.0 kB] Get:83 http://localhost:3142/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:84 http://localhost:3142/debian unstable/main amd64 libexpat1 amd64 2.6.2-1 [103 kB] Get:85 http://localhost:3142/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:86 http://localhost:3142/debian unstable/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:87 http://localhost:3142/debian unstable/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:88 http://localhost:3142/debian unstable/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:89 http://localhost:3142/debian unstable/main amd64 libpng16-16t64 amd64 1.6.43-5 [278 kB] Get:90 http://localhost:3142/debian unstable/main amd64 libfreetype6 amd64 2.13.2+dfsg-1+b4 [439 kB] Get:91 http://localhost:3142/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-1.1 [388 kB] Get:92 http://localhost:3142/debian unstable/main amd64 libheif-plugin-dav1d amd64 1.17.6-1+b2 [9856 B] Get:93 http://localhost:3142/debian unstable/main amd64 libheif-plugin-libde265 amd64 1.17.6-1+b2 [13.1 kB] Get:94 http://localhost:3142/debian unstable/main amd64 libheif1 amd64 1.17.6-1+b2 [284 kB] Get:95 http://localhost:3142/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b1 [32.0 kB] Get:96 http://localhost:3142/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-4+b1 [171 kB] Get:97 http://localhost:3142/debian unstable/main amd64 libwebp7 amd64 1.4.0-0.1 [311 kB] Get:98 http://localhost:3142/debian unstable/main amd64 libtiff6 amd64 4.5.1+git230720-4 [322 kB] Get:99 http://localhost:3142/debian unstable/main amd64 libxau6 amd64 1:1.0.9-1+b1 [18.1 kB] Get:100 http://localhost:3142/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3+b1 [24.3 kB] Get:101 http://localhost:3142/debian unstable/main amd64 libxcb1 amd64 1.17.0-2 [144 kB] Get:102 http://localhost:3142/debian unstable/main amd64 libx11-data all 2:1.8.7-1 [328 kB] Get:103 http://localhost:3142/debian unstable/main amd64 libx11-6 amd64 2:1.8.7-1+b1 [799 kB] Get:104 http://localhost:3142/debian unstable/main amd64 libxpm4 amd64 1:3.5.17-1+b1 [56.1 kB] Get:105 http://localhost:3142/debian unstable/main amd64 libgd3 amd64 2.3.3-9+b3 [125 kB] Get:106 http://localhost:3142/debian unstable/main amd64 libgfortran5 amd64 14.1.0-1 [836 kB] Get:107 http://localhost:3142/debian unstable/main amd64 libgslcblas0 amd64 2.7.1+dfsg-6+b1 [107 kB] Get:108 http://localhost:3142/debian unstable/main amd64 libgsl27 amd64 2.7.1+dfsg-6+b1 [934 kB] Get:109 http://localhost:3142/debian unstable/main amd64 libsz2 amd64 1.1.3-1 [7740 B] Get:110 http://localhost:3142/debian unstable/main amd64 libhdf4-0-alt amd64 4.3.0-1 [267 kB] Get:111 http://localhost:3142/debian unstable/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:112 http://localhost:3142/debian unstable/main amd64 liburi-perl all 5.28-1 [98.6 kB] Get:113 http://localhost:3142/debian unstable/main amd64 libhtml-parser-perl amd64 3.82-1 [98.9 kB] Get:114 http://localhost:3142/debian unstable/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:115 http://localhost:3142/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:116 http://localhost:3142/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:117 http://localhost:3142/debian unstable/main amd64 libhttp-message-perl all 6.46-1 [79.7 kB] Get:118 http://localhost:3142/debian unstable/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:119 http://localhost:3142/debian unstable/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:120 http://localhost:3142/debian unstable/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get:121 http://localhost:3142/debian unstable/main amd64 libnet-ssleay-perl amd64 1.94-1+b1 [339 kB] Get:122 http://localhost:3142/debian unstable/main amd64 libio-socket-ssl-perl all 2.085-1 [218 kB] Get:123 http://localhost:3142/debian unstable/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:124 http://localhost:3142/debian unstable/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:125 http://localhost:3142/debian unstable/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:126 http://localhost:3142/debian unstable/main amd64 libwww-perl all 6.77-1 [183 kB] Get:127 http://localhost:3142/debian unstable/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get:128 http://localhost:3142/debian unstable/main amd64 libncurses6 amd64 6.5-2 [104 kB] Get:129 http://localhost:3142/debian unstable/main amd64 libpod-parser-perl all 1.67-1 [94.1 kB] Get:130 http://localhost:3142/debian unstable/main amd64 proj-data all 9.4.1-1 [6289 kB] Get:131 http://localhost:3142/debian unstable/main amd64 libproj25 amd64 9.4.1-1 [1371 kB] Get:132 http://localhost:3142/debian unstable/main amd64 libterm-readkey-perl amd64 2.38-2+b3 [24.7 kB] Get:133 http://localhost:3142/debian unstable/main amd64 pdl amd64 1:2.089-1 [3730 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 54.8 MB in 2s (27.2 MB/s) Selecting previously unselected package netbase. 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Adding 'diversion of /usr/bin/podselect to /usr/bin/podselect.bundled by libpod-parser-perl' Adding 'diversion of /usr/share/man/man1/podselect.1.gz to /usr/share/man/man1/podselect.bundled.1.gz by libpod-parser-perl' Unpacking libpod-parser-perl (1.67-1) ... Selecting previously unselected package proj-data. Preparing to unpack .../128-proj-data_9.4.1-1_all.deb ... Unpacking proj-data (9.4.1-1) ... Selecting previously unselected package libproj25:amd64. Preparing to unpack .../129-libproj25_9.4.1-1_amd64.deb ... Unpacking libproj25:amd64 (9.4.1-1) ... Selecting previously unselected package libterm-readkey-perl. Preparing to unpack .../130-libterm-readkey-perl_2.38-2+b3_amd64.deb ... Unpacking libterm-readkey-perl (2.38-2+b3) ... Selecting previously unselected package pdl. Preparing to unpack .../131-pdl_1%3a2.089-1_amd64.deb ... Unpacking pdl (1:2.089-1) ... Selecting previously unselected package sbuild-build-depends-main-dummy. Preparing to unpack .../132-sbuild-build-depends-main-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up libexpat1:amd64 (2.6.2-1) ... Setting up libpipeline1:amd64 (1.5.7-2) ... Setting up libsharpyuv0:amd64 (1.4.0-0.1) ... Setting up libaom3:amd64 (3.8.2-2) ... Setting up libfile-which-perl (1.27-2) ... Setting up libxau6:amd64 (1:1.0.9-1+b1) ... Setting up libkeyutils1:amd64 (1.6.3-3) ... Setting up libicu72:amd64 (72.1-4+b1) ... Setting up liblerc4:amd64 (4.0.0+ds-4+b1) ... Setting up proj-data (9.4.1-1) ... Setting up bsdextrautils (2.40.1-4) ... Setting up libgslcblas0:amd64 (2.7.1+dfsg-6+b1) ... Setting up libtest-deep-perl (1.204-1) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libclone-perl:amd64 (0.46-1+b2) ... Setting up libalgorithm-diff-perl (1.201-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libbrotli1:amd64 (1.1.0-2+b3) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up libpsl5t64:amd64 (0.21.2-1.1) ... Setting up libnghttp2-14:amd64 (1.61.0-1+b1) ... Setting up libdeflate0:amd64 (1.20-1) ... Setting up perl-openssl-defaults:amd64 (7+b2) ... Setting up gettext-base (0.21-14+b1) ... Setting up libgsl27:amd64 (2.7.1+dfsg-6+b1) ... Setting up m4 (1.4.19-4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libsvtav1enc1d1:amd64 (1.7.0+dfsg-2+b1) ... Setting up libcom-err2:amd64 (1.47.1-1) ... Setting up file (1:5.45-3) ... Setting up libjbig0:amd64 (2.1-6.1+b1) ... Setting up librav1e0:amd64 (0.7.1-2) ... Setting up libaec0:amd64 (1.1.3-1) ... Setting up libfakeroot:amd64 (1.34-1) ... Setting up libelf1t64:amd64 (0.191-1+b1) ... Setting up libkrb5support0:amd64 (1.20.1-6+b1) ... Setting up fakeroot (1.34-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-3) ... Setting up libx11-data (2:1.8.7-1) ... Setting up libtext-diff-perl (1.45-2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libncurses6:amd64 (6.5-2) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:amd64 (1.6.43-5) ... Setting up libio-html-perl (1.004-3) ... Setting up libpod-parser-perl (1.67-1) ... Setting up autopoint (0.21-14) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libk5crypto3:amd64 (1.20.1-6+b1) ... Setting up libgfortran5:amd64 (14.1.0-1) ... Setting up autoconf (2.71-3) ... Setting up libwebp7:amd64 (1.4.0-0.1) ... Setting up libcapture-tiny-perl (0.48-2) ... Setting up libtimedate-perl (2.3300-2) ... Setting up dwz (0.15-1+b1) ... Setting up libdata-stag-perl (0.14-3) ... Setting up libdav1d7:amd64 (1.4.2-1) ... Setting up sensible-utils (0.0.22) ... Setting up libtiff6:amd64 (4.5.1+git230720-4) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up libsub-uplevel-perl (0.2800-3) ... Setting up netbase (6.4) ... Configuration file '/etc/protocols' ==> File on system created by you or by a script. ==> File also in package provided by package maintainer. ==> Using current old file as you requested. Configuration file '/etc/services' ==> File on system created by you or by a script. ==> File also in package provided by package maintainer. ==> Using current old file as you requested. Setting up libabsl20230802:amd64 (20230802.1-4) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libkrb5-3:amd64 (1.20.1-6+b1) ... Setting up libbio-perl-perl (1.7.8-1) ... Setting up libssh2-1t64:amd64 (1.11.0-5) ... Setting up libterm-readkey-perl (2.38-2+b3) ... Setting up libde265-0:amd64 (1.0.15-1+b1) ... Setting up openssl (3.2.1-3) ... Setting up libbsd0:amd64 (0.12.2-1) ... Setting up libyuv0:amd64 (0.0.1888.20240509-4) ... Setting up libxml2:amd64 (2.12.7+dfsg-2) ... Setting up liburi-perl (5.28-1) ... Setting up libdbi-perl:amd64 (1.643-4+b2) ... Setting up libsz2:amd64 (1.1.3-1) ... Setting up libnet-ssleay-perl:amd64 (1.94-1+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3+b1) ... Setting up libxcb1:amd64 (1.17.0-2) ... Setting up gettext (0.21-14+b1) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libtool (2.4.7-7) ... Setting up fontconfig-config (2.15.0-1.1) ... Setting up libtest-warn-perl (0.37-2) ... Setting up libtest-differences-perl (0.71-1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libtest-exception-perl (0.43-3) ... Setting up libfreetype6:amd64 (2.13.2+dfsg-1+b4) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-6+b1) ... Setting up libgav1-1:amd64 (0.19.0-2+b1) ... Setting up libhdf4-0-alt:amd64 (4.3.0-1) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up groff-base (1.23.0-4) ... Setting up libhtml-parser-perl:amd64 (3.82-1) ... Setting up libx11-6:amd64 (2:1.8.7-1+b1) ... Setting up libfontconfig1:amd64 (2.15.0-1.1) ... Setting up libio-socket-ssl-perl (2.085-1) ... Setting up libhttp-message-perl (6.46-1) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libavif16:amd64 (1.0.4-3) ... Setting up libxpm4:amd64 (1:3.5.17-1+b1) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libtest-most-perl (0.38-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libcurl3t64-gnutls:amd64 (8.8.0-1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up bioperl (1.7.8-1) ... Setting up libproj25:amd64 (9.4.1-1) ... Setting up debhelper (13.15.3) ... Setting up libheif-plugin-dav1d:amd64 (1.17.6-1+b2) ... Setting up libwww-perl (6.77-1) ... Setting up libheif1:amd64 (1.17.6-1+b2) ... Setting up libgd3:amd64 (2.3.3-9+b3) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libheif-plugin-libde265:amd64 (1.17.6-1+b2) ... Setting up pdl (1:2.089-1) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.38-12) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-21-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) amd64 (x86_64) Toolchain package versions: binutils_2.42-4 dpkg-dev_1.22.6 g++-13_13.2.0-25 gcc-13_13.2.0-25 libc6-dev_2.38-12 libstdc++-13-dev_13.2.0-25 libstdc++6_14.1.0-1 linux-libc-dev_6.8.12-1 Package versions: adduser_3.137 apt_2.9.4 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-14 autotools-dev_20220109.1 base-files_13.2 base-passwd_3.6.3 bash_5.2.21-2+b1 binutils_2.42-4 binutils-common_2.42-4 binutils-x86-64-linux-gnu_2.42-4 bioperl_1.7.8-1 bsdextrautils_2.40.1-4 bsdutils_1:2.40.1-4 build-essential_12.10 bzip2_1.0.8-5.1 ca-certificates_20240203 coreutils_9.4-3.1 cpp_4:13.2.0-7 cpp-13_13.2.0-25 cpp-13-x86-64-linux-gnu_13.2.0-25 cpp-x86-64-linux-gnu_4:13.2.0-7 dash_0.5.12-8 debconf_1.5.86 debhelper_13.15.3 debian-archive-keyring_2023.4 debianutils_5.17 dh-autoreconf_20 dh-strip-nondeterminism_1.14.0-1 diffutils_1:3.10-1 dirmngr_2.2.43-7 dpkg_1.22.6 dpkg-dev_1.22.6 dwz_0.15-1+b1 eatmydata_131-2 fakeroot_1.34-1 file_1:5.45-3 findutils_4.9.0-6 fontconfig-config_2.15.0-1.1 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 g++_4:13.2.0-7 g++-13_13.2.0-25 g++-13-x86-64-linux-gnu_13.2.0-25 g++-x86-64-linux-gnu_4:13.2.0-7 gcc_4:13.2.0-7 gcc-13_13.2.0-25 gcc-13-base_13.2.0-25 gcc-13-x86-64-linux-gnu_13.2.0-25 gcc-14-base_14.1.0-1 gcc-x86-64-linux-gnu_4:13.2.0-7 gettext_0.21-14+b1 gettext-base_0.21-14+b1 gnupg_2.2.43-7 gnupg-l10n_2.2.43-7 gnupg-utils_2.2.43-7 gpg_2.2.43-7 gpg-agent_2.2.43-7 gpg-wks-client_2.2.43-7 gpgconf_2.2.43-7 gpgsm_2.2.43-7 gpgv_2.2.43-7 grep_3.11-4 groff-base_1.23.0-4 gzip_1.12-1.1 hostname_3.23+nmu2 init-system-helpers_1.66 intltool-debian_0.35.0+20060710.6 libabsl20230802_20230802.1-4 libacl1_2.3.2-2 libaec0_1.1.3-1 libalgorithm-diff-perl_1.201-1 libaom3_3.8.2-2 libapt-pkg6.0t64_2.9.4 libarchive-zip-perl_1.68-1 libasan8_14.1.0-1 libassuan0_2.5.6-1+b1 libatomic1_14.1.0-1 libattr1_1:2.5.2-1 libaudit-common_1:3.1.2-2.1 libaudit1_1:3.1.2-2.1 libavif16_1.0.4-3 libbinutils_2.42-4 libbio-perl-perl_1.7.8-1 libblkid1_2.40.1-4 libbrotli1_1.1.0-2+b3 libbsd0_0.12.2-1 libbz2-1.0_1.0.8-5.1 libc-bin_2.38-12 libc-dev-bin_2.38-12 libc6_2.38-12 libc6-dev_2.38-12 libcap-ng0_0.8.5-1 libcap2_1:2.66-5 libcapture-tiny-perl_0.48-2 libcc1-0_14.1.0-1 libclass-data-inheritable-perl_0.08-3 libclone-perl_0.46-1+b2 libcom-err2_1.47.1-1 libcrypt-dev_1:4.4.36-4 libcrypt1_1:4.4.36-4 libctf-nobfd0_2.42-4 libctf0_2.42-4 libcurl3t64-gnutls_8.8.0-1 libdata-stag-perl_0.14-3 libdav1d7_1.4.2-1 libdb5.3t64_5.3.28+dfsg2-7 libdbi-perl_1.643-4+b2 libde265-0_1.0.15-1+b1 libdebconfclient0_0.272 libdebhelper-perl_13.15.3 libdeflate0_1.20-1 libdevel-stacktrace-perl_2.0500-1 libdpkg-perl_1.22.6 libeatmydata1_131-2 libelf1t64_0.191-1+b1 libencode-locale-perl_1.05-3 libexception-class-perl_1.45-1 libexpat1_2.6.2-1 libfakeroot_1.34-1 libffi8_3.4.6-1 libfile-listing-perl_6.16-1 libfile-stripnondeterminism-perl_1.14.0-1 libfile-which-perl_1.27-2 libfontconfig1_2.15.0-1.1 libfreetype6_2.13.2+dfsg-1+b4 libgav1-1_0.19.0-2+b1 libgcc-13-dev_13.2.0-25 libgcc-s1_14.1.0-1 libgcrypt20_1.10.3-3 libgd3_2.3.3-9+b3 libgdbm-compat4t64_1.23-5.1+b1 libgdbm6t64_1.23-5.1+b1 libgfortran5_14.1.0-1 libgmp10_2:6.3.0+dfsg-2+b1 libgnutls30t64_3.8.5-3 libgomp1_14.1.0-1 libgpg-error0_1.49-2 libgprofng0_2.42-4 libgsl27_2.7.1+dfsg-6+b1 libgslcblas0_2.7.1+dfsg-6+b1 libgssapi-krb5-2_1.20.1-6+b1 libhdf4-0-alt_4.3.0-1 libheif-plugin-dav1d_1.17.6-1+b2 libheif-plugin-libde265_1.17.6-1+b2 libheif1_1.17.6-1+b2 libhogweed6t64_3.9.1-2.2 libhtml-parser-perl_3.82-1 libhtml-tagset-perl_3.24-1 libhtml-tree-perl_5.07-3 libhttp-cookies-perl_6.11-1 libhttp-date-perl_6.06-1 libhttp-message-perl_6.46-1 libhttp-negotiate-perl_6.01-2 libhwasan0_14.1.0-1 libicu72_72.1-4+b1 libidn2-0_2.3.7-2 libio-html-perl_1.004-3 libio-socket-ssl-perl_2.085-1 libio-string-perl_1.08-4 libisl23_0.26-3+b2 libitm1_14.1.0-1 libjansson4_2.14-2+b2 libjbig0_2.1-6.1+b1 libjpeg62-turbo_1:2.1.5-3 libk5crypto3_1.20.1-6+b1 libkeyutils1_1.6.3-3 libkrb5-3_1.20.1-6+b1 libkrb5support0_1.20.1-6+b1 libksba8_1.6.6-1 libldap-2.5-0_2.5.17+dfsg-1 liblerc4_4.0.0+ds-4+b1 liblsan0_14.1.0-1 liblwp-mediatypes-perl_6.04-2 liblwp-protocol-https-perl_6.14-1 liblz4-1_1.9.4-2 liblzma5_5.6.1+really5.4.5-1 libmagic-mgc_1:5.45-3 libmagic1t64_1:5.45-3 libmd0_1.1.0-2 libmount1_2.40.1-4 libmpc3_1.3.1-1+b2 libmpfr6_4.2.1-1+b1 libncurses6_6.5-2 libncursesw6_6.5-2 libnet-http-perl_6.23-1 libnet-ssleay-perl_1.94-1+b1 libnettle8t64_3.9.1-2.2 libnghttp2-14_1.61.0-1+b1 libnpth0t64_1.6-3.1 libp11-kit0_0.25.3-5 libpam-modules_1.5.3-7 libpam-modules-bin_1.5.3-7 libpam-runtime_1.5.3-7 libpam0g_1.5.3-7 libpcre2-8-0_10.42-4+b1 libperl5.38t64_5.38.2-5 libpipeline1_1.5.7-2 libpng16-16t64_1.6.43-5 libpod-parser-perl_1.67-1 libproj25_9.4.1-1 libpsl5t64_0.21.2-1.1 libquadmath0_14.1.0-1 librav1e0_0.7.1-2 libreadline8t64_8.2-4 librtmp1_2.4+20151223.gitfa8646d.1-2+b4 libsasl2-2_2.1.28+dfsg1-6 libsasl2-modules-db_2.1.28+dfsg1-6 libseccomp2_2.5.5-1 libselinux1_3.5-2+b2 libsemanage-common_3.5-1 libsemanage2_3.5-1+b3 libsepol2_3.5-2+b1 libsframe1_2.42-4 libsharpyuv0_1.4.0-0.1 libsmartcols1_2.40.1-4 libsqlite3-0_3.46.0-1 libssh2-1t64_1.11.0-5 libssl3t64_3.2.1-3 libstdc++-13-dev_13.2.0-25 libstdc++6_14.1.0-1 libsub-uplevel-perl_0.2800-3 libsvtav1enc1d1_1.7.0+dfsg-2+b1 libsystemd0_256~rc3-7 libsz2_1.1.3-1 libtasn1-6_4.19.0-3+b2 libterm-readkey-perl_2.38-2+b3 libtest-deep-perl_1.204-1 libtest-differences-perl_0.71-1 libtest-exception-perl_0.43-3 libtest-most-perl_0.38-1 libtest-warn-perl_0.37-2 libtext-diff-perl_1.45-2 libtiff6_4.5.1+git230720-4 libtimedate-perl_2.3300-2 libtinfo6_6.5-2 libtool_2.4.7-7 libtry-tiny-perl_0.31-2 libtsan2_14.1.0-1 libubsan1_14.1.0-1 libuchardet0_0.0.8-1+b1 libudev1_256~rc3-7 libunistring5_1.2-1 liburi-perl_5.28-1 libuuid1_2.40.1-4 libwebp7_1.4.0-0.1 libwww-perl_6.77-1 libwww-robotrules-perl_6.02-1 libx11-6_2:1.8.7-1+b1 libx11-data_2:1.8.7-1 libxau6_1:1.0.9-1+b1 libxcb1_1.17.0-2 libxdmcp6_1:1.1.2-3+b1 libxml2_2.12.7+dfsg-2 libxpm4_1:3.5.17-1+b1 libxxhash0_0.8.2-2+b1 libyuv0_0.0.1888.20240509-4 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.8.12-1 login_1:4.13+dfsg1-4 m4_1.4.19-4 make_4.3-4.1 man-db_2.12.1-1 mawk_1.3.4.20240123-1 ncurses-base_6.5-2 ncurses-bin_6.5-2 netbase_6.4 openssl_3.2.1-3 passwd_1:4.13+dfsg1-4 patch_2.7.6-7 pdl_1:2.089-1 perl_5.38.2-5 perl-base_5.38.2-5 perl-modules-5.38_5.38.2-5 perl-openssl-defaults_7+b2 pinentry-curses_1.2.1-3+b2 po-debconf_1.0.21+nmu1 proj-data_9.4.1-1 readline-common_8.2-4 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.22 sysvinit-utils_3.09-1 tar_1.35+dfsg-3 usr-is-merged_39 util-linux_2.40.1-4 xz-utils_5.6.1+really5.4.5-1 zlib1g_1:1.3.dfsg+really1.3.1-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libtfbs-perl Binary: libtfbs-perl Architecture: any Version: 0.7.1+ds-3 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Charles Plessy , Andreas Tille Homepage: http://tfbs.genereg.net Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/libtfbs-perl Vcs-Git: https://salsa.debian.org/med-team/libtfbs-perl.git Testsuite: autopkgtest Testsuite-Triggers: libgd-gd2-perl, pkg-perl-autopkgtest, pkg-perl-autopkgtest-heavy Build-Depends: debhelper-compat (= 13), dh-sequence-pdl, perl, pdl (>= 1:2.016), bioperl, libwww-perl, libdbi-perl Package-List: libtfbs-perl deb perl optional arch=any Checksums-Sha1: 8906681164013dda04cfabdb52b2d5667e5a972b 196444 libtfbs-perl_0.7.1+ds.orig.tar.xz 39a98b26e94ac23da4f9d4fd78986f8b0d12f689 11840 libtfbs-perl_0.7.1+ds-3.debian.tar.xz Checksums-Sha256: 4720e694e55b9df9c9732f4e93102882005666019c49652000d1230244929e73 196444 libtfbs-perl_0.7.1+ds.orig.tar.xz d33a5299b220c175387263d41d45b52c29832e47ad0760c0137bae72d4ff21b2 11840 libtfbs-perl_0.7.1+ds-3.debian.tar.xz Files: 77cf0f26efb308a11b8d9e0fdb600fa4 196444 libtfbs-perl_0.7.1+ds.orig.tar.xz fc86263bcf2b7dfbcae8da6a012bca55 11840 libtfbs-perl_0.7.1+ds-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEgYLeQXBWQI1hRlDRZ1DxCuiNSvEFAmXx5CwACgkQZ1DxCuiN SvHupg/+MTyy2NBYoc5IzY6mq5L8x0z2TVaD96y4LvgxWfBBOATjJ9zCRwgfWrB6 yKdDpFWOP3EjJHaugLFSMDsfjGn0gitTSa21ipW0p7z+K0ZPIfPs6BNTM62FlMPv 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dpkg-source: info: unpacking libtfbs-perl_0.7.1+ds-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying configure.patch dpkg-source: info: applying spelling-errors.patch dpkg-source: info: applying gcc-14.patch Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Timed Build Commands | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/starting-build-commands/no-network libtfbs-perl_0.7.1+ds-3 sid amd64 -------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/starting-build-commands/no-network libtfbs-perl_0.7.1+ds-3 sid amd64'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_GB.UTF-8 LANGUAGE=en_GB:en LC_ALL=C.UTF-8 LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so LOGNAME=debomatic PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/<> SCHROOT_ALIAS_NAME=sid-amd64-debomatic SCHROOT_CHROOT_NAME=sid-amd64-debomatic SCHROOT_COMMAND=env SCHROOT_GID=110 SCHROOT_GROUP=sbuild SCHROOT_SESSION_ID=sid-amd64-debomatic-6edd16fe-bdd8-4bbd-98d4-b8f864b089c5 SCHROOT_UID=1002 SCHROOT_USER=debomatic SHELL=/bin/sh USER=debomatic dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -Zxz dpkg-buildpackage: info: source package libtfbs-perl dpkg-buildpackage: info: source version 0.7.1+ds-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Bas Couwenberg dpkg-source -Zxz --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean dpkg-source -Zxz -b . dpkg-source: info: using source format '3.0 (quilt)' dpkg-source: info: building libtfbs-perl using existing ./libtfbs-perl_0.7.1+ds.orig.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: building libtfbs-perl in libtfbs-perl_0.7.1+ds-3.debian.tar.xz dpkg-source: info: building libtfbs-perl in libtfbs-perl_0.7.1+ds-3.dsc debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2" "LD=x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now" ------------------------------------------------- WARNING ------------------------------------------------- GD.pm does not seem to be installed. GD is reqired to produce "sequence logos" from information content matrices. If you need this functionality, please visit http://stein.cshl.org/WWW/software/GD/ for information on obtaining and installing GD. ------------------------------------------------- Do you have write access to a MySQL database server? [n] Checking if your kit is complete... Warning: the following files are missing in your kit: README Please inform the author. Writing MYMETA.yml and MYMETA.json Generating a Unix-style Makefile Writing Makefile for TFBS Writing MYMETA.yml and MYMETA.json dh_auto_build make -j2 make[1]: Entering directory '/<>' cp TFBS/Matrix/ICM.pm blib/lib/TFBS/Matrix/ICM.pm Skip blib/lib/TFBS/Matrix/_Alignment.pm (unchanged) cp TFBS/DB/FlatFileDir.pm blib/lib/TFBS/DB/FlatFileDir.pm Skip blib/lib/TFBS/SiteSet.pm (unchanged) Skip blib/lib/TFBS/PatternGen/YMF/Motif.pm (unchanged) Skip blib/lib/TFBS/Tools/SetOperations.pm (unchanged) Skip blib/lib/TFBS/PatternGen/Motif/Matrix.pm (unchanged) Skip blib/lib/TFBS/DB/LocalTRANSFAC.pm (unchanged) Skip blib/lib/TFBS/Matrix/PWM.pm (unchanged) cp TFBS/Matrix/Alignment.pm blib/lib/TFBS/Matrix/Alignment.pm Skip blib/lib/TFBS/PatternGen/Gibbs.pm (unchanged) Skip blib/lib/TFBS/PatternGen/SimplePFM.pm (unchanged) cp TFBS/DB/JASPAR7.pm blib/lib/TFBS/DB/JASPAR7.pm Skip blib/lib/TFBS/PatternGen/Elph/Motif.pm (unchanged) cp TFBS/ConservationProfile.pm blib/lib/TFBS/ConservationProfile.pm cp TFBS/DB/JASPAR4.pm blib/lib/TFBS/DB/JASPAR4.pm cp TFBS/README.md blib/lib/TFBS/README.md cp TFBS/Matrix.pm blib/lib/TFBS/Matrix.pm cp TFBS/PatternGen.pm blib/lib/TFBS/PatternGen.pm cp TFBS/PatternGen/AnnSpec.pm blib/lib/TFBS/PatternGen/AnnSpec.pm cp TFBS/Run/ConservationProfileGenerator.pm blib/lib/TFBS/Run/ConservationProfileGenerator.pm cp TFBS/TFFM.pm blib/lib/TFBS/TFFM.pm Skip blib/lib/TFBS/PatternGen/AnnSpec/Motif.pm (unchanged) cp TFBS/DB/JASPAR6.pm blib/lib/TFBS/DB/JASPAR6.pm Skip blib/lib/TFBS/PatternGen/MEME/Motif.pm (unchanged) cp TFBS/DB/JASPAR5.pm blib/lib/TFBS/DB/JASPAR5.pm Skip blib/lib/TFBS/DB.pm (unchanged) Skip blib/lib/TFBS/PatternGen/Motif/Word.pm (unchanged) Skip blib/lib/TFBS/PatternGenI.pm (unchanged) cp TFBS/DB/TRANSFAC.pm blib/lib/TFBS/DB/TRANSFAC.pm Skip blib/lib/TFBS/PatternGen/Gibbs/Motif.pm (unchanged) Skip blib/lib/TFBS/DB/JASPAR2.pm (unchanged) Skip blib/lib/TFBS/PatternI.pm (unchanged) Skip blib/lib/TFBS/PatternGen/Elph.pm (unchanged) Skip blib/lib/TFBS/SitePairSet.pm (unchanged) cp TFBS/MatrixSet.pm blib/lib/TFBS/MatrixSet.pm cp TFBS/Matrix/PFM.pm blib/lib/TFBS/Matrix/PFM.pm cp TFBS/DB/JASPAR.pm blib/lib/TFBS/DB/JASPAR.pm cp TFBS/PatternGen/YMF.pm blib/lib/TFBS/PatternGen/YMF.pm Skip blib/lib/TFBS/Site.pm (unchanged) cp TFBS/SitePair.pm blib/lib/TFBS/SitePair.pm Skip blib/lib/TFBS/PatternGen/MEME.pm (unchanged) make[2]: Entering directory '/<>/Ext' Skip blib/lib/TFBS/Word/Consensus.pm (unchanged) cp TFBS/_Iterator/_SiteSetIterator.pm blib/lib/TFBS/_Iterator/_SiteSetIterator.pm Skip blib/lib/TFBS/Word.pm (unchanged) Skip blib/lib/TFBS/_Iterator.pm (unchanged) cp TFBS/_Iterator/_MatrixSetIterator.pm blib/lib/TFBS/_Iterator/_MatrixSetIterator.pm Skip ../blib/lib/pwm_search.h (unchanged) cp lib/pwm_searchPFF.c ../blib/lib/pwm_searchPFF.c Skip ../blib/lib/TFBS/Ext/pwmsearch.pm (unchanged) Running Mkbootstrap for pwmsearch () "/usr/bin/perl" "/usr/share/perl/5.38.2/ExtUtils/xsubpp" -typemap '/usr/share/perl/5.38/ExtUtils/typemap' pwmsearch.xs > pwmsearch.xsc chmod 644 "pwmsearch.bs" "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- pwmsearch.bs ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.bs 644 Please specify prototyping behavior for pwmsearch.xs (see perlxs manual) mv pwmsearch.xsc pwmsearch.c x86_64-linux-gnu-gcc -c -I. -I./lib -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"0.2\" -DXS_VERSION=\"0.2\" -fPIC "-I/usr/lib/x86_64-linux-gnu/perl/5.38/CORE" pwmsearch.c In file included from pwmsearch.xs:4: ./lib/pwm_searchPFF.c:303:1: warning: return type defaults to ‘int’ [-Wimplicit-int] 303 | get_sequence(fp,seq_id,sequence) | ^~~~~~~~~~~~ ./lib/pwm_searchPFF.c:414:1: warning: return type defaults to ‘int’ [-Wimplicit-int] 414 | best_pull(pargs,pbase,pstrand,pscore) | ^~~~~~~~~ rm -f ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.so x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -shared -L/usr/local/lib -fstack-protector-strong pwmsearch.o -o ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.so \ -lm \ chmod 755 ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.so Manifying 1 pod document make[2]: Leaving directory '/<>/Ext' Manifying 35 pod documents make[1]: Leaving directory '/<>' debian/rules override_dh_auto_test make[1]: Entering directory '/<>' prove --blib t/01_Matrix.t t/02_Search.t t/03_DB_FlatFileDir.t t/05_DB_JASPAR.t t/06_SimplePFM.t t/07_AnnSpec.t t/07_Elph.t t/07_Gibbs.t t/07_MEME.t t/08_DB_LocalTRANSFAC.t t/09_Word_Consensus.t t/10_Tools_SetOperations.t Ext/t/*.t Possible precedence issue with control flow operator at /<>/blib/lib/TFBS/Matrix/_Alignment.pm line 152. t/01_Matrix.t ............... ok Possible precedence issue with control flow operator at /<>/blib/lib/TFBS/Matrix/_Alignment.pm line 152. t/02_Search.t ............... ok Possible precedence issue with control flow operator at /<>/blib/lib/TFBS/Matrix/_Alignment.pm line 152. t/03_DB_FlatFileDir.t ....... ok Possible precedence issue with control flow operator at /<>/blib/lib/TFBS/Matrix/_Alignment.pm line 152. t/05_DB_JASPAR.t ............ ok Possible precedence issue with control flow operator at /<>/blib/lib/TFBS/Matrix/_Alignment.pm line 152. t/06_SimplePFM.t ............ ok Possible precedence issue with control flow operator at /<>/blib/lib/TFBS/Matrix/_Alignment.pm line 152. t/07_AnnSpec.t .............. ok Possible precedence issue with control flow operator at /<>/blib/lib/TFBS/Matrix/_Alignment.pm line 152. t/07_Elph.t ................. ok Possible precedence issue with control flow operator at /<>/blib/lib/TFBS/Matrix/_Alignment.pm line 152. t/07_Gibbs.t ................ ok Possible precedence issue with control flow operator at /<>/blib/lib/TFBS/Matrix/_Alignment.pm line 152. t/07_MEME.t ................. ok Possible precedence issue with control flow operator at /<>/blib/lib/TFBS/Matrix/_Alignment.pm line 152. t/08_DB_LocalTRANSFAC.t ..... ok Possible precedence issue with control flow operator at /<>/blib/lib/TFBS/Matrix/_Alignment.pm line 152. t/09_Word_Consensus.t ....... ok Possible precedence issue with control flow operator at /<>/blib/lib/TFBS/Matrix/_Alignment.pm line 152. t/10_Tools_SetOperations.t .. ok Ext/t/pwmsearch.t ........... ok All tests successful. Files=13, Tests=45, 3 wallclock secs ( 0.04 usr 0.02 sys + 1.82 cusr 0.37 csys = 2.25 CPU) Result: PASS make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/libtfbs-perl/ make -j2 install DESTDIR=/<>/libtfbs-perl-0.7.1\+ds/debian/libtfbs-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/<>' make[2]: Entering directory '/<>/Ext' "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- pwmsearch.bs ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.bs 644 Manifying 1 pod document make[2]: Leaving directory '/<>/Ext' Manifying 35 pod documents Files found in blib/arch: installing files in blib/lib into architecture dependent library tree Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/auto/TFBS/Ext/pwmsearch/pwmsearch.so Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/auto/TFBS/Ext/pwmsearch/pwmsearch.bundle Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/pwm_search.h Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/pwm_searchPFF.c Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/Site.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/SiteSet.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/SitePairSet.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/SitePair.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/ConservationProfile.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/PatternI.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/PatternGen.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/README.md Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/_Iterator.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/Matrix.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/Word.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/TFFM.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/DB.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/PatternGenI.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/MatrixSet.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/Run/ConservationProfileGenerator.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/DB/JASPAR.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/DB/FlatFileDir.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/DB/JASPAR2.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/DB/JASPAR4.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/DB/TRANSFAC.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/DB/JASPAR5.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/DB/JASPAR7.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/DB/LocalTRANSFAC.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/DB/JASPAR6.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/Ext/pwmsearch.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/Matrix/ICM.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/Matrix/_Alignment.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/Matrix/Alignment.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/Matrix/PFM.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/Matrix/PWM.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/_Iterator/_MatrixSetIterator.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/_Iterator/_SiteSetIterator.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/Word/Consensus.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/Tools/SetOperations.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/PatternGen/YMF.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/PatternGen/Gibbs.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/PatternGen/AnnSpec.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/PatternGen/MEME.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/PatternGen/SimplePFM.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/PatternGen/Elph.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/PatternGen/MEME/Motif.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/PatternGen/YMF/Motif.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/PatternGen/Gibbs/Motif.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/PatternGen/Elph/Motif.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/PatternGen/Motif/Matrix.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/PatternGen/Motif/Word.pm Installing /<>/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/PatternGen/AnnSpec/Motif.pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Elph.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::LocalTRANSFAC.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::Alignment.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Gibbs.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::AnnSpec.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR5.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR4.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::SiteSet.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::SimplePFM.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::MEME::Motif.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::TRANSFAC.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::Ext::pwmsearch.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::YMF::Motif.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::Word::Consensus.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::MatrixSet.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::YMF.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::PWM.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::SitePair.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::Site.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::PFM.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Gibbs::Motif.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR6.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::SitePairSet.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR7.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR2.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::AnnSpec::Motif.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::Word.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::ICM.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::MEME.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternI.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::FlatFileDir.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Elph::Motif.3pm Installing /<>/debian/libtfbs-perl/usr/share/man/man3/TFBS::TFFM.3pm make[1]: Leaving directory '/<>' dh_installdocs dh_installchangelogs debian/rules override_dh_installexamples make[1]: Entering directory '/<>' dh_installexamples mkdir -p debian/libtfbs-perl/usr/share/doc/libtfbs-perl/examples/Ext cp -a Ext/t debian/libtfbs-perl/usr/share/doc/libtfbs-perl/examples/Ext for pl in `grep -Rl '#!/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \ sed -i '1s?^#!/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' ${pl} ; \ done make[1]: Leaving directory '/<>' dh_installman dh_lintian dh_perl dh_pdl dh_link dh_strip_nondeterminism dh_compress debian/rules override_dh_fixperms make[1]: Entering directory '/<>' dh_fixperms find debian -name pwmsearch.bundle -exec chmod -x \{\} \; make[1]: Leaving directory '/<>' dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libtfbs-perl' in '../libtfbs-perl_0.7.1+ds-3_amd64.deb'. dpkg-deb: building package 'libtfbs-perl-dbgsym' in '../libtfbs-perl-dbgsym_0.7.1+ds-3_amd64.deb'. dpkg-genbuildinfo -O../libtfbs-perl_0.7.1+ds-3_amd64.buildinfo dpkg-genchanges -O../libtfbs-perl_0.7.1+ds-3_amd64.changes dpkg-genchanges: info: not including original source code in upload dpkg-source -Zxz --after-build . dpkg-buildpackage: info: binary and diff upload (original source NOT included) -------------------------------------------------------------------------------- Build finished at 2024-06-02T14:46:45Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libtfbs-perl_0.7.1+ds-3_amd64.changes: -------------------------------------- Format: 1.8 Date: Wed, 13 Mar 2024 18:33:49 +0100 Source: libtfbs-perl Binary: libtfbs-perl libtfbs-perl-dbgsym Architecture: source amd64 Version: 0.7.1+ds-3 Distribution: sid Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Bas Couwenberg Description: libtfbs-perl - scanning DNA sequence with a position weight matrix Closes: 1066716 Changes: libtfbs-perl (0.7.1+ds-3) unstable; urgency=medium . * Team upload. * Bump debhelper compat to 13. * Use dh-sequence-pdl for dh_pdl. * Update lintian overrides. * Bump Standards-Version to 4.6.2, no changes. * Add Rules-Requires-Root to control file. * Add patch to fix FTBFS with GCC 14. (closes: #1066716) Checksums-Sha1: 764cb7bd4423d203a8ac93a9629ffbbea63493ae 1340 libtfbs-perl_0.7.1+ds-3.dsc 39a98b26e94ac23da4f9d4fd78986f8b0d12f689 11840 libtfbs-perl_0.7.1+ds-3.debian.tar.xz f99a526b9775c79acc2d9b2d884494a2907d1087 35136 libtfbs-perl-dbgsym_0.7.1+ds-3_amd64.deb d728b6c10710232ec29e7d3502da8ec86b20a4d8 8653 libtfbs-perl_0.7.1+ds-3_amd64.buildinfo 1995f465519e654d2efd16fd4a5e98844e0cc7ff 221620 libtfbs-perl_0.7.1+ds-3_amd64.deb Checksums-Sha256: dc96cc06753598efe2a864bb0efd1bb2669410e110cf2f8f96f21ffb51e5c713 1340 libtfbs-perl_0.7.1+ds-3.dsc d33a5299b220c175387263d41d45b52c29832e47ad0760c0137bae72d4ff21b2 11840 libtfbs-perl_0.7.1+ds-3.debian.tar.xz 449da04329df4f6ebc43c9122d804af899f3479c4f0b3a0beccc3baf3d9dfd81 35136 libtfbs-perl-dbgsym_0.7.1+ds-3_amd64.deb b78b1ede6882f585b01bbd64eab9e4bc8aa6ce5b45671ad4ab83837dfe041b46 8653 libtfbs-perl_0.7.1+ds-3_amd64.buildinfo 35d930653054095dd4d00e42b1f29bfd2d76fd145224627aa316e2785dfeee82 221620 libtfbs-perl_0.7.1+ds-3_amd64.deb Files: 747081c0e8b5b1f34b222ae144ba76eb 1340 perl optional libtfbs-perl_0.7.1+ds-3.dsc fc86263bcf2b7dfbcae8da6a012bca55 11840 perl optional libtfbs-perl_0.7.1+ds-3.debian.tar.xz b68d219c81803030d25af5487175502e 35136 debug optional libtfbs-perl-dbgsym_0.7.1+ds-3_amd64.deb b0393136b7425836b34c88129746ee51 8653 perl optional libtfbs-perl_0.7.1+ds-3_amd64.buildinfo 9a15ab5e83432fd99f389f5141d2506a 221620 perl optional libtfbs-perl_0.7.1+ds-3_amd64.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: libtfbs-perl Binary: libtfbs-perl libtfbs-perl-dbgsym Architecture: amd64 source Version: 0.7.1+ds-3 Checksums-Md5: 747081c0e8b5b1f34b222ae144ba76eb 1340 libtfbs-perl_0.7.1+ds-3.dsc b68d219c81803030d25af5487175502e 35136 libtfbs-perl-dbgsym_0.7.1+ds-3_amd64.deb 9a15ab5e83432fd99f389f5141d2506a 221620 libtfbs-perl_0.7.1+ds-3_amd64.deb Checksums-Sha1: 764cb7bd4423d203a8ac93a9629ffbbea63493ae 1340 libtfbs-perl_0.7.1+ds-3.dsc f99a526b9775c79acc2d9b2d884494a2907d1087 35136 libtfbs-perl-dbgsym_0.7.1+ds-3_amd64.deb 1995f465519e654d2efd16fd4a5e98844e0cc7ff 221620 libtfbs-perl_0.7.1+ds-3_amd64.deb Checksums-Sha256: dc96cc06753598efe2a864bb0efd1bb2669410e110cf2f8f96f21ffb51e5c713 1340 libtfbs-perl_0.7.1+ds-3.dsc 449da04329df4f6ebc43c9122d804af899f3479c4f0b3a0beccc3baf3d9dfd81 35136 libtfbs-perl-dbgsym_0.7.1+ds-3_amd64.deb 35d930653054095dd4d00e42b1f29bfd2d76fd145224627aa316e2785dfeee82 221620 libtfbs-perl_0.7.1+ds-3_amd64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sun, 02 Jun 2024 14:46:45 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-14), autotools-dev (= 20220109.1), base-files (= 13.2), base-passwd (= 3.6.3), bash (= 5.2.21-2+b1), binutils (= 2.42-4), binutils-common (= 2.42-4), binutils-x86-64-linux-gnu (= 2.42-4), bioperl (= 1.7.8-1), bsdextrautils (= 2.40.1-4), bsdutils (= 1:2.40.1-4), build-essential (= 12.10), bzip2 (= 1.0.8-5.1), ca-certificates (= 20240203), coreutils (= 9.4-3.1), cpp (= 4:13.2.0-7), cpp-13 (= 13.2.0-25), cpp-13-x86-64-linux-gnu (= 13.2.0-25), cpp-x86-64-linux-gnu (= 4:13.2.0-7), dash (= 0.5.12-8), debconf (= 1.5.86), debhelper (= 13.15.3), debianutils (= 5.17), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.0-1), diffutils (= 1:3.10-1), dpkg (= 1.22.6), dpkg-dev (= 1.22.6), dwz (= 0.15-1+b1), file (= 1:5.45-3), findutils (= 4.9.0-6), fontconfig-config (= 2.15.0-1.1), fonts-dejavu-core (= 2.37-8), fonts-dejavu-mono (= 2.37-8), g++ (= 4:13.2.0-7), g++-13 (= 13.2.0-25), g++-13-x86-64-linux-gnu (= 13.2.0-25), g++-x86-64-linux-gnu (= 4:13.2.0-7), gcc (= 4:13.2.0-7), gcc-13 (= 13.2.0-25), gcc-13-base (= 13.2.0-25), gcc-13-x86-64-linux-gnu (= 13.2.0-25), gcc-14-base (= 14.1.0-1), gcc-x86-64-linux-gnu (= 4:13.2.0-7), gettext (= 0.21-14+b1), gettext-base (= 0.21-14+b1), grep (= 3.11-4), groff-base (= 1.23.0-4), gzip (= 1.12-1.1), hostname (= 3.23+nmu2), init-system-helpers (= 1.66), intltool-debian (= 0.35.0+20060710.6), libabsl20230802 (= 20230802.1-4), libacl1 (= 2.3.2-2), libaec0 (= 1.1.3-1), libalgorithm-diff-perl (= 1.201-1), libaom3 (= 3.8.2-2), libarchive-zip-perl (= 1.68-1), libasan8 (= 14.1.0-1), libatomic1 (= 14.1.0-1), libattr1 (= 1:2.5.2-1), libaudit-common (= 1:3.1.2-2.1), libaudit1 (= 1:3.1.2-2.1), libavif16 (= 1.0.4-3), libbinutils (= 2.42-4), libbio-perl-perl (= 1.7.8-1), libblkid1 (= 2.40.1-4), libbrotli1 (= 1.1.0-2+b3), libbsd0 (= 0.12.2-1), libbz2-1.0 (= 1.0.8-5.1), libc-bin (= 2.38-12), libc-dev-bin (= 2.38-12), libc6 (= 2.38-12), libc6-dev (= 2.38-12), libcap-ng0 (= 0.8.5-1), libcap2 (= 1:2.66-5), libcapture-tiny-perl (= 0.48-2), libcc1-0 (= 14.1.0-1), libclass-data-inheritable-perl (= 0.08-3), libclone-perl (= 0.46-1+b2), libcom-err2 (= 1.47.1-1), libcrypt-dev (= 1:4.4.36-4), libcrypt1 (= 1:4.4.36-4), libctf-nobfd0 (= 2.42-4), libctf0 (= 2.42-4), libcurl3t64-gnutls (= 8.8.0-1), libdata-stag-perl (= 0.14-3), libdav1d7 (= 1.4.2-1), libdb5.3t64 (= 5.3.28+dfsg2-7), libdbi-perl (= 1.643-4+b2), libde265-0 (= 1.0.15-1+b1), libdebconfclient0 (= 0.272), libdebhelper-perl (= 13.15.3), libdeflate0 (= 1.20-1), libdevel-stacktrace-perl (= 2.0500-1), libdpkg-perl (= 1.22.6), libelf1t64 (= 0.191-1+b1), libencode-locale-perl (= 1.05-3), libexception-class-perl (= 1.45-1), libexpat1 (= 2.6.2-1), libffi8 (= 3.4.6-1), libfile-listing-perl (= 6.16-1), libfile-stripnondeterminism-perl (= 1.14.0-1), libfile-which-perl (= 1.27-2), libfontconfig1 (= 2.15.0-1.1), libfreetype6 (= 2.13.2+dfsg-1+b4), libgav1-1 (= 0.19.0-2+b1), libgcc-13-dev (= 13.2.0-25), libgcc-s1 (= 14.1.0-1), libgd3 (= 2.3.3-9+b3), libgdbm-compat4t64 (= 1.23-5.1+b1), libgdbm6t64 (= 1.23-5.1+b1), libgfortran5 (= 14.1.0-1), libgmp10 (= 2:6.3.0+dfsg-2+b1), libgnutls30t64 (= 3.8.5-3), libgomp1 (= 14.1.0-1), libgprofng0 (= 2.42-4), libgsl27 (= 2.7.1+dfsg-6+b1), libgslcblas0 (= 2.7.1+dfsg-6+b1), libgssapi-krb5-2 (= 1.20.1-6+b1), libhdf4-0-alt (= 4.3.0-1), libheif-plugin-dav1d (= 1.17.6-1+b2), libheif-plugin-libde265 (= 1.17.6-1+b2), libheif1 (= 1.17.6-1+b2), libhogweed6t64 (= 3.9.1-2.2), libhtml-parser-perl (= 3.82-1), libhtml-tagset-perl (= 3.24-1), libhtml-tree-perl (= 5.07-3), libhttp-cookies-perl (= 6.11-1), libhttp-date-perl (= 6.06-1), libhttp-message-perl (= 6.46-1), libhttp-negotiate-perl (= 6.01-2), libhwasan0 (= 14.1.0-1), libicu72 (= 72.1-4+b1), libidn2-0 (= 2.3.7-2), libio-html-perl (= 1.004-3), libio-socket-ssl-perl (= 2.085-1), libio-string-perl (= 1.08-4), libisl23 (= 0.26-3+b2), libitm1 (= 14.1.0-1), libjansson4 (= 2.14-2+b2), libjbig0 (= 2.1-6.1+b1), libjpeg62-turbo (= 1:2.1.5-3), libk5crypto3 (= 1.20.1-6+b1), libkeyutils1 (= 1.6.3-3), libkrb5-3 (= 1.20.1-6+b1), libkrb5support0 (= 1.20.1-6+b1), libldap-2.5-0 (= 2.5.17+dfsg-1), liblerc4 (= 4.0.0+ds-4+b1), liblsan0 (= 14.1.0-1), liblwp-mediatypes-perl (= 6.04-2), liblwp-protocol-https-perl (= 6.14-1), liblzma5 (= 5.6.1+really5.4.5-1), libmagic-mgc (= 1:5.45-3), libmagic1t64 (= 1:5.45-3), libmd0 (= 1.1.0-2), libmount1 (= 2.40.1-4), libmpc3 (= 1.3.1-1+b2), libmpfr6 (= 4.2.1-1+b1), libncurses6 (= 6.5-2), libnet-http-perl (= 6.23-1), libnet-ssleay-perl (= 1.94-1+b1), libnettle8t64 (= 3.9.1-2.2), libnghttp2-14 (= 1.61.0-1+b1), libp11-kit0 (= 0.25.3-5), libpam-modules (= 1.5.3-7), libpam-modules-bin (= 1.5.3-7), libpam-runtime (= 1.5.3-7), libpam0g (= 1.5.3-7), libpcre2-8-0 (= 10.42-4+b1), libperl5.38t64 (= 5.38.2-5), libpipeline1 (= 1.5.7-2), libpng16-16t64 (= 1.6.43-5), libpod-parser-perl (= 1.67-1), libproj25 (= 9.4.1-1), libpsl5t64 (= 0.21.2-1.1), libquadmath0 (= 14.1.0-1), librav1e0 (= 0.7.1-2), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b4), libsasl2-2 (= 2.1.28+dfsg1-6), libsasl2-modules-db (= 2.1.28+dfsg1-6), libseccomp2 (= 2.5.5-1), libselinux1 (= 3.5-2+b2), libsframe1 (= 2.42-4), libsharpyuv0 (= 1.4.0-0.1), libsmartcols1 (= 2.40.1-4), libsqlite3-0 (= 3.46.0-1), libssh2-1t64 (= 1.11.0-5), libssl3t64 (= 3.2.1-3), libstdc++-13-dev (= 13.2.0-25), libstdc++6 (= 14.1.0-1), libsub-uplevel-perl (= 0.2800-3), libsvtav1enc1d1 (= 1.7.0+dfsg-2+b1), libsystemd0 (= 256~rc3-7), libsz2 (= 1.1.3-1), libtasn1-6 (= 4.19.0-3+b2), libterm-readkey-perl (= 2.38-2+b3), libtest-deep-perl (= 1.204-1), libtest-differences-perl (= 0.71-1), libtest-exception-perl (= 0.43-3), libtest-most-perl (= 0.38-1), libtest-warn-perl (= 0.37-2), libtext-diff-perl (= 1.45-2), libtiff6 (= 4.5.1+git230720-4), libtimedate-perl (= 2.3300-2), libtinfo6 (= 6.5-2), libtool (= 2.4.7-7), libtry-tiny-perl (= 0.31-2), libtsan2 (= 14.1.0-1), libubsan1 (= 14.1.0-1), libuchardet0 (= 0.0.8-1+b1), libudev1 (= 256~rc3-7), libunistring5 (= 1.2-1), liburi-perl (= 5.28-1), libuuid1 (= 2.40.1-4), libwebp7 (= 1.4.0-0.1), libwww-perl (= 6.77-1), libwww-robotrules-perl (= 6.02-1), libx11-6 (= 2:1.8.7-1+b1), libx11-data (= 2:1.8.7-1), libxau6 (= 1:1.0.9-1+b1), libxcb1 (= 1.17.0-2), libxdmcp6 (= 1:1.1.2-3+b1), libxml2 (= 2.12.7+dfsg-2), libxpm4 (= 1:3.5.17-1+b1), libyuv0 (= 0.0.1888.20240509-4), libzstd1 (= 1.5.5+dfsg2-2), linux-libc-dev (= 6.8.12-1), login (= 1:4.13+dfsg1-4), m4 (= 1.4.19-4), make (= 4.3-4.1), man-db (= 2.12.1-1), mawk (= 1.3.4.20240123-1), ncurses-base (= 6.5-2), ncurses-bin (= 6.5-2), netbase (= 6.4), openssl (= 3.2.1-3), patch (= 2.7.6-7), pdl (= 1:2.089-1), perl (= 5.38.2-5), perl-base (= 5.38.2-5), perl-modules-5.38 (= 5.38.2-5), perl-openssl-defaults (= 7+b2), po-debconf (= 1.0.21+nmu1), proj-data (= 9.4.1-1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.22), sysvinit-utils (= 3.09-1), tar (= 1.35+dfsg-3), usr-is-merged (= 39), util-linux (= 2.40.1-4), xz-utils (= 5.6.1+really5.4.5-1), zlib1g (= 1:1.3.dfsg+really1.3.1-1) Environment: DEB_BUILD_OPTIONS="parallel=2" LANG="en_GB.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" LD_LIBRARY_PATH="/usr/lib/libeatmydata" SOURCE_DATE_EPOCH="1710351229" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libtfbs-perl-dbgsym_0.7.1+ds-3_amd64.deb ---------------------------------------- new Debian package, version 2.0. size 35136 bytes: control archive=540 bytes. 395 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: libtfbs-perl-dbgsym Source: libtfbs-perl Version: 0.7.1+ds-3 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 48 Depends: libtfbs-perl (= 0.7.1+ds-3) Section: debug Priority: optional Description: debug symbols for libtfbs-perl Build-Ids: b1756b3e21dc6e2b2a385556bcc98f90b281586a drwxr-xr-x root/root 0 2024-03-13 17:33 ./ drwxr-xr-x root/root 0 2024-03-13 17:33 ./usr/ drwxr-xr-x root/root 0 2024-03-13 17:33 ./usr/lib/ drwxr-xr-x root/root 0 2024-03-13 17:33 ./usr/lib/debug/ drwxr-xr-x root/root 0 2024-03-13 17:33 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2024-03-13 17:33 ./usr/lib/debug/.build-id/b1/ -rw-r--r-- root/root 38432 2024-03-13 17:33 ./usr/lib/debug/.build-id/b1/756b3e21dc6e2b2a385556bcc98f90b281586a.debug drwxr-xr-x root/root 0 2024-03-13 17:33 ./usr/share/ drwxr-xr-x root/root 0 2024-03-13 17:33 ./usr/share/doc/ lrwxrwxrwx root/root 0 2024-03-13 17:33 ./usr/share/doc/libtfbs-perl-dbgsym -> libtfbs-perl libtfbs-perl_0.7.1+ds-3_amd64.deb --------------------------------- new Debian package, version 2.0. size 221620 bytes: control archive=4004 bytes. 1396 bytes, 26 lines control 9943 bytes, 114 lines md5sums Package: libtfbs-perl Version: 0.7.1+ds-3 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 979 Depends: perl (>= 5.38.2-5), perlapi-5.38.2, pdl (>= 1:2.089-1), pdlapi-20, libc6 (>= 2.38), bioperl, libwww-perl, libdbi-perl Recommends: libgd-gd2-perl | libgd-gd2-noxpm-perl Section: perl Priority: optional Homepage: http://tfbs.genereg.net Description: scanning DNA sequence with a position weight matrix The TFBS perl modules comprise a set of routines to interact with the Transfac and Jaspar databases that describe a special family of proteins, the transcription factors. These bind to genomic DNA to initiate (or prevent) the readout of a gene. Once multiple binding sites are known for a transcription factor, these are gathered in a single file and are aligned in order to find position-specific characteristica that might be used to predict such binding events in novel DNA sequences. . If you use TFBS in your work, please cite "Lenhard B., Wasserman W.W. (2002) TFBS: Computational framework for transcription factor binding site analysis. Bioinformatics 18:1135-1136". . Note: the TFBS perl module is no longer under active development. All the functionality can be found in the TFBSTools Bioconductor package; users are highly encouraged to switch. drwxr-xr-x root/root 0 2024-03-13 17:33 ./ drwxr-xr-x root/root 0 2024-03-13 17:33 ./usr/ drwxr-xr-x root/root 0 2024-03-13 17:33 ./usr/lib/ drwxr-xr-x root/root 0 2024-03-13 17:33 ./usr/lib/x86_64-linux-gnu/ drwxr-xr-x root/root 0 2024-03-13 17:33 ./usr/lib/x86_64-linux-gnu/perl5/ drwxr-xr-x root/root 0 2024-03-13 17:33 ./usr/lib/x86_64-linux-gnu/perl5/5.38/ drwxr-xr-x root/root 0 2024-03-13 17:33 ./usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/ -rw-r--r-- root/root 4598 2017-03-07 12:21 ./usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/ConservationProfile.pm -rw-r--r-- root/root 326 2017-03-07 12:21 ./usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/DB.pm drwxr-xr-x root/root 0 2024-03-13 17:33 ./usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/DB/ -rw-r--r-- root/root 13827 2017-03-07 12:21 ./usr/lib/x86_64-linux-gnu/perl5/5.38/TFBS/DB/FlatFileDir.pm -rw-r--r-- root/root 58675 2024-03-13 17:33 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/<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: full Build-Space: 5540 Build-Time: 11 Distribution: sid Host Architecture: amd64 Install-Time: 16 Job: /srv/debomatic/incoming/libtfbs-perl_0.7.1+ds-3.dsc Machine Architecture: amd64 Package: libtfbs-perl Package-Time: 35 Source-Version: 0.7.1+ds-3 Space: 5540 Status: successful Version: 0.7.1+ds-3 -------------------------------------------------------------------------------- Finished at 2024-06-02T14:46:45Z Build needed 00:00:35, 5540k disk space