sbuild (Debian sbuild) 0.85.9 (29 May 2024) on carme.larted.org.uk +==============================================================================+ | cod-tools 3.10.0+dfsg-1 (amd64) Sun, 02 Jun 2024 14:57:10 +0000 | +==============================================================================+ Package: cod-tools Version: 3.10.0+dfsg-1 Source Version: 3.10.0+dfsg-1 Distribution: sid Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: full perl: warning: Setting locale failed. perl: warning: Please check that your locale settings: LANGUAGE = "en_GB:en", LC_ALL = (unset), LANG = "en_GB.UTF-8" are supported and installed on your system. perl: warning: Falling back to the standard locale ("C"). I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-debomatic-cb278c95-6aa7-4ff4-9830-5fc57c70685b' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup cod-tools_3.10.0+dfsg-1 sid amd64 -------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup cod-tools_3.10.0+dfsg-1 sid amd64'. Finished processing commands. -------------------------------------------------------------------------------- I: NOTICE: Log filtering will replace 'build/cod-tools-Y8MNNh/resolver-xGYIDZ' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian unstable InRelease [198 kB] Get:2 http://localhost:3142/debian sid InRelease [198 kB] Get:3 http://localhost:3142/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian unstable/main amd64 Packages T-2024-06-02-1406.32-F-2024-06-02-1406.32.pdiff [80.8 kB] Get:5 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian unstable/main amd64 Packages T-2024-06-02-1406.32-F-2024-06-02-1406.32.pdiff [80.8 kB] Get:6 http://localhost:3142/debian sid/main Sources T-2024-06-02-1406.32-F-2024-06-02-1406.32.pdiff [17.8 kB] Get:6 http://localhost:3142/debian sid/main Sources T-2024-06-02-1406.32-F-2024-06-02-1406.32.pdiff [17.8 kB] Fetched 622 kB in 7s (86.6 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- /srv/debomatic/incoming/cod-tools_3.10.0+dfsg-1.dsc exists in /srv/debomatic/incoming; copying to chroot I: NOTICE: Log filtering will replace 'build/cod-tools-Y8MNNh/cod-tools-3.10.0+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/cod-tools-Y8MNNh' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: bison, debhelper-compat (= 13), dh-python, gawk, libchemistry-opensmiles-perl, libclone-perl, libdata-compare-perl, libdate-calc-perl, libdatetime-format-rfc3339-perl, libdbd-mysql-perl, libdbd-sqlite3-perl, libdbi-perl, libdigest-sha-perl, libgraph-nauty-perl, libgraph-perl, libhtml-parser-perl, libjson-perl, liblist-moreutils-perl, libmodule-scandeps-perl, libparse-yapp-perl, libsymspg-dev, libtext-diff-perl, libtext-unidecode-perl, libwww-curl-perl, libxml-simple-perl, moreutils, perl, python3-all-dev, python3-dev, python3-setuptools, swig, tree, build-essential, fakeroot Filtered Build-Depends: bison, debhelper-compat (= 13), dh-python, gawk, libchemistry-opensmiles-perl, libclone-perl, libdata-compare-perl, libdate-calc-perl, libdatetime-format-rfc3339-perl, libdbd-mysql-perl, libdbd-sqlite3-perl, libdbi-perl, libdigest-sha-perl, libgraph-nauty-perl, libgraph-perl, libhtml-parser-perl, libjson-perl, liblist-moreutils-perl, libmodule-scandeps-perl, libparse-yapp-perl, libsymspg-dev, libtext-diff-perl, libtext-unidecode-perl, libwww-curl-perl, libxml-simple-perl, moreutils, perl, python3-all-dev, python3-dev, python3-setuptools, swig, tree, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1349 B] Get:5 copy:/<>/apt_archive ./ Packages [1181 B] Fetched 3145 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bison bsdextrautils debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz fakeroot file gawk gettext gettext-base groff-base intltool-debian libalgorithm-c3-perl libalgorithm-diff-perl libarchive-zip-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl libbit-vector-perl libbrotli1 libcarp-clan-perl libchemistry-opensmiles-perl libclass-c3-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-singleton-perl libcliquer1 libclone-perl libcom-err2 libcurl3t64-gnutls libdata-compare-perl libdata-optlist-perl libdate-calc-perl libdatetime-format-rfc3339-perl libdatetime-locale-perl libdatetime-perl libdatetime-timezone-perl libdbd-mysql-perl libdbd-sqlite3-perl libdbi-perl libdebhelper-perl libdevel-callchecker-perl libdevel-stacktrace-perl libdynaloader-functions-perl libelf1t64 libeval-closure-perl libexception-class-perl libexpat1 libexpat1-dev libexporter-tiny-perl libfakeroot libfile-find-rule-perl libfile-sharedir-perl libfile-stripnondeterminism-perl libgraph-nauty-perl libgraph-perl libgssapi-krb5-2 libheap-perl libhtml-parser-perl libhtml-tagset-perl libicu72 libio-pty-perl libipc-run-perl libjs-jquery libjs-sphinxdoc libjs-underscore libjson-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblist-moreutils-perl liblist-moreutils-xs-perl libmagic-mgc libmagic1t64 libmariadb3 libmodule-implementation-perl libmodule-runtime-perl libmodule-scandeps-perl libmro-compat-perl libnamespace-autoclean-perl libnamespace-clean-perl libnauty-2.8.8 libnghttp2-14 libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libparams-validationcompiler-perl libparse-yapp-perl libpipeline1 libpsl5t64 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libpython3.11t64 libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 librole-tiny-perl librtmp1 libset-object-perl libsigsegv2 libspecio-perl libssh2-1t64 libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsymspg-dev libsymspg2 libtext-diff-perl libtext-glob-perl libtext-unidecode-perl libtime-duration-perl libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libvariable-magic-perl libwww-curl-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxstring-perl m4 man-db mariadb-common media-types moreutils mysql-common netbase po-debconf python3 python3-all python3-all-dev python3-dev python3-distutils python3-lib2to3 python3-minimal python3-pkg-resources python3-setuptools python3.11 python3.11-dev python3.11-minimal python3.12 python3.12-dev python3.12-minimal sensible-utils swig tree tzdata ucf zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc bison-doc dh-make flit python3-build python3-installer python3-wheel gawk-doc gettext-doc libasprintf-dev libgettextpo-dev groff libscalar-properties-perl libmldbm-perl libnet-daemon-perl libsql-statement-perl krb5-doc krb5-user libdata-dump-perl nauty nauty-doc libscalar-number-perl libtest-fatal-perl libtool-doc gfortran | fortran95-compiler gcj-jdk libbusiness-isbn-perl libregexp-ipv6-perl libwww-perl libcurl4-gnutls-dev m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python-setuptools-doc python3.11-venv python3.11-doc binfmt-support python3.12-venv python3.12-doc swig-doc swig-examples Recommended packages: curl | wget | lynx libalgorithm-diff-xs-perl libclass-c3-xs-perl ca-certificates libdate-calc-xs-perl libdevel-lexalias-perl libarchive-cpio-perl libhttp-message-perl javascript-common libjson-xs-perl krb5-locales libpackage-stash-xs-perl libclass-xsaccessor-perl publicsuffix libref-util-perl libltdl-dev libwww-perl libxml-sax-expat-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bison bsdextrautils debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz fakeroot file gawk gettext gettext-base groff-base intltool-debian libalgorithm-c3-perl libalgorithm-diff-perl libarchive-zip-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl libbit-vector-perl libbrotli1 libcarp-clan-perl libchemistry-opensmiles-perl libclass-c3-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-singleton-perl libcliquer1 libclone-perl libcom-err2 libcurl3t64-gnutls libdata-compare-perl libdata-optlist-perl libdate-calc-perl libdatetime-format-rfc3339-perl libdatetime-locale-perl libdatetime-perl libdatetime-timezone-perl libdbd-mysql-perl libdbd-sqlite3-perl libdbi-perl libdebhelper-perl libdevel-callchecker-perl libdevel-stacktrace-perl libdynaloader-functions-perl libelf1t64 libeval-closure-perl libexception-class-perl libexpat1 libexpat1-dev libexporter-tiny-perl libfakeroot libfile-find-rule-perl libfile-sharedir-perl libfile-stripnondeterminism-perl libgraph-nauty-perl libgraph-perl libgssapi-krb5-2 libheap-perl libhtml-parser-perl libhtml-tagset-perl libicu72 libio-pty-perl libipc-run-perl libjs-jquery libjs-sphinxdoc libjs-underscore libjson-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblist-moreutils-perl liblist-moreutils-xs-perl libmagic-mgc libmagic1t64 libmariadb3 libmodule-implementation-perl libmodule-runtime-perl libmodule-scandeps-perl libmro-compat-perl libnamespace-autoclean-perl libnamespace-clean-perl libnauty-2.8.8 libnghttp2-14 libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libparams-validationcompiler-perl libparse-yapp-perl libpipeline1 libpsl5t64 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libpython3.11t64 libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 librole-tiny-perl librtmp1 libset-object-perl libsigsegv2 libspecio-perl libssh2-1t64 libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsymspg-dev libsymspg2 libtext-diff-perl libtext-glob-perl libtext-unidecode-perl libtime-duration-perl libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libvariable-magic-perl libwww-curl-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxstring-perl m4 man-db mariadb-common media-types moreutils mysql-common netbase po-debconf python3 python3-all python3-all-dev python3-dev python3-distutils python3-lib2to3 python3-minimal python3-pkg-resources python3-setuptools python3.11 python3.11-dev python3.11-minimal python3.12 python3.12-dev python3.12-minimal sbuild-build-depends-main-dummy sensible-utils swig tree tzdata ucf zlib1g-dev 0 upgraded, 171 newly installed, 0 to remove and 0 not upgraded. Need to get 61.5 MB of archives. After this operation, 271 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1108 B] Get:2 http://localhost:3142/debian unstable/main amd64 libsigsegv2 amd64 2.14-1+b1 [34.3 kB] Get:3 http://localhost:3142/debian unstable/main amd64 gawk amd64 1:5.2.1-2+b1 [674 kB] Get:4 http://localhost:3142/debian unstable/main amd64 libpython3.11-minimal amd64 3.11.9-1 [817 kB] Get:5 http://localhost:3142/debian unstable/main amd64 libexpat1 amd64 2.6.2-1 [103 kB] Get:6 http://localhost:3142/debian unstable/main amd64 python3.11-minimal amd64 3.11.9-1 [1879 kB] Get:7 http://localhost:3142/debian unstable/main amd64 python3-minimal amd64 3.11.8-1 [26.3 kB] Get:8 http://localhost:3142/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get:9 http://localhost:3142/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get:10 http://localhost:3142/debian unstable/main amd64 tzdata all 2024a-4 [255 kB] Get:11 http://localhost:3142/debian unstable/main amd64 libpython3.11-stdlib amd64 3.11.9-1 [1792 kB] Get:12 http://localhost:3142/debian unstable/main amd64 python3.11 amd64 3.11.9-1 [602 kB] Get:13 http://localhost:3142/debian unstable/main amd64 libpython3-stdlib amd64 3.11.8-1 [9332 B] Get:14 http://localhost:3142/debian unstable/main amd64 python3 amd64 3.11.8-1 [27.4 kB] Get:15 http://localhost:3142/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.3-1 [809 kB] Get:16 http://localhost:3142/debian unstable/main amd64 python3.12-minimal amd64 3.12.3-1 [2139 kB] Get:17 http://localhost:3142/debian unstable/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get:18 http://localhost:3142/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get:19 http://localhost:3142/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get:20 http://localhost:3142/debian unstable/main amd64 file amd64 1:5.45-3 [42.9 kB] Get:21 http://localhost:3142/debian unstable/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get:22 http://localhost:3142/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get:23 http://localhost:3142/debian unstable/main amd64 groff-base amd64 1.23.0-4 [1180 kB] Get:24 http://localhost:3142/debian unstable/main amd64 bsdextrautils amd64 2.40.1-4 [95.7 kB] Get:25 http://localhost:3142/debian unstable/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get:26 http://localhost:3142/debian unstable/main amd64 man-db amd64 2.12.1-1 [1411 kB] Get:27 http://localhost:3142/debian unstable/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:28 http://localhost:3142/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get:29 http://localhost:3142/debian unstable/main amd64 autoconf all 2.71-3 [332 kB] Get:30 http://localhost:3142/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:31 http://localhost:3142/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:32 http://localhost:3142/debian unstable/main amd64 autopoint all 0.21-14 [496 kB] Get:33 http://localhost:3142/debian unstable/main amd64 bison amd64 2:3.8.2+dfsg-1+b1 [1175 kB] Get:34 http://localhost:3142/debian unstable/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get:35 http://localhost:3142/debian unstable/main amd64 libtool all 2.4.7-7 [517 kB] Get:36 http://localhost:3142/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:37 http://localhost:3142/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:38 http://localhost:3142/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get:39 http://localhost:3142/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get:40 http://localhost:3142/debian unstable/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get:41 http://localhost:3142/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:42 http://localhost:3142/debian unstable/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get:43 http://localhost:3142/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg-2 [670 kB] Get:44 http://localhost:3142/debian unstable/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get:45 http://localhost:3142/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:46 http://localhost:3142/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:47 http://localhost:3142/debian unstable/main amd64 debhelper all 13.15.3 [901 kB] Get:48 http://localhost:3142/debian unstable/main amd64 python3-pkg-resources all 68.1.2-2 [241 kB] Get:49 http://localhost:3142/debian unstable/main amd64 python3-lib2to3 all 3.12.3-3.1 [77.7 kB] Get:50 http://localhost:3142/debian unstable/main amd64 python3-distutils all 3.12.3-3.1 [131 kB] Get:51 http://localhost:3142/debian unstable/main amd64 python3-setuptools all 68.1.2-2 [468 kB] Get:52 http://localhost:3142/debian unstable/main amd64 dh-python all 6.20240422 [107 kB] Get:53 http://localhost:3142/debian unstable/main amd64 libfakeroot amd64 1.34-1 [28.9 kB] Get:54 http://localhost:3142/debian unstable/main amd64 fakeroot amd64 1.34-1 [74.0 kB] Get:55 http://localhost:3142/debian unstable/main amd64 libalgorithm-c3-perl all 0.11-2 [10.8 kB] Get:56 http://localhost:3142/debian unstable/main amd64 libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get:57 http://localhost:3142/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b1 [10.6 kB] Get:58 http://localhost:3142/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get:59 http://localhost:3142/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.009-1 [15.9 kB] Get:60 http://localhost:3142/debian unstable/main amd64 libparams-classify-perl amd64 0.015-2+b3 [22.4 kB] Get:61 http://localhost:3142/debian unstable/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:62 http://localhost:3142/debian unstable/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:63 http://localhost:3142/debian unstable/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:64 http://localhost:3142/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:65 http://localhost:3142/debian unstable/main amd64 libvariable-magic-perl amd64 0.64-1 [44.7 kB] Get:66 http://localhost:3142/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB] Get:67 http://localhost:3142/debian unstable/main amd64 libcarp-clan-perl all 6.08-2 [14.1 kB] Get:68 http://localhost:3142/debian unstable/main amd64 libbit-vector-perl amd64 7.4-3+b1 [141 kB] Get:69 http://localhost:3142/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB] Get:70 http://localhost:3142/debian unstable/main amd64 libheap-perl all 0.80-5 [34.3 kB] Get:71 http://localhost:3142/debian unstable/main amd64 libset-object-perl amd64 1.42-1+b4 [37.5 kB] Get:72 http://localhost:3142/debian unstable/main amd64 libgraph-perl all 1:0.9727-1 [111 kB] Get:73 http://localhost:3142/debian unstable/main amd64 libparse-yapp-perl all 1.21-3 [42.5 kB] Get:74 http://localhost:3142/debian unstable/main amd64 libchemistry-opensmiles-perl all 0.9.0-1 [26.1 kB] Get:75 http://localhost:3142/debian unstable/main amd64 libclass-c3-perl all 0.35-2 [21.0 kB] Get:76 http://localhost:3142/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:77 http://localhost:3142/debian unstable/main amd64 libclass-inspector-perl all 1.36-3 [17.5 kB] Get:78 http://localhost:3142/debian unstable/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:79 http://localhost:3142/debian unstable/main amd64 libclass-singleton-perl all 1.6-2 [12.5 kB] Get:80 http://localhost:3142/debian unstable/main amd64 libcliquer1 amd64 1.21-3+b1 [31.6 kB] Get:81 http://localhost:3142/debian unstable/main amd64 libclone-perl amd64 0.46-1+b2 [13.7 kB] Get:82 http://localhost:3142/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1 [22.9 kB] Get:83 http://localhost:3142/debian unstable/main amd64 libkrb5support0 amd64 1.20.1-6+b1 [33.3 kB] Get:84 http://localhost:3142/debian unstable/main amd64 libk5crypto3 amd64 1.20.1-6+b1 [79.8 kB] Get:85 http://localhost:3142/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get:86 http://localhost:3142/debian unstable/main amd64 libkrb5-3 amd64 1.20.1-6+b1 [333 kB] Get:87 http://localhost:3142/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.20.1-6+b1 [135 kB] Get:88 http://localhost:3142/debian unstable/main amd64 libnghttp2-14 amd64 1.61.0-1+b1 [75.6 kB] Get:89 http://localhost:3142/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get:90 http://localhost:3142/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get:91 http://localhost:3142/debian unstable/main amd64 libssh2-1t64 amd64 1.11.0-5 [215 kB] Get:92 http://localhost:3142/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.8.0-1 [434 kB] Get:93 http://localhost:3142/debian unstable/main amd64 libnumber-compare-perl all 0.03-3 [6332 B] Get:94 http://localhost:3142/debian unstable/main amd64 libtext-glob-perl all 0.11-3 [7676 B] Get:95 http://localhost:3142/debian unstable/main amd64 libfile-find-rule-perl all 0.34-3 [26.6 kB] Get:96 http://localhost:3142/debian unstable/main amd64 libdata-compare-perl all 1.29-1 [19.6 kB] Get:97 http://localhost:3142/debian unstable/main amd64 libparams-util-perl amd64 1.102-3 [24.0 kB] Get:98 http://localhost:3142/debian unstable/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get:99 http://localhost:3142/debian unstable/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:100 http://localhost:3142/debian unstable/main amd64 libdate-calc-perl all 6.4-2 [191 kB] Get:101 http://localhost:3142/debian unstable/main amd64 libfile-sharedir-perl all 1.118-3 [16.0 kB] Get:102 http://localhost:3142/debian unstable/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:103 http://localhost:3142/debian unstable/main amd64 libsub-identify-perl amd64 0.14-3+b2 [11.2 kB] Get:104 http://localhost:3142/debian unstable/main amd64 libsub-name-perl amd64 0.27-1+b2 [12.5 kB] Get:105 http://localhost:3142/debian unstable/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:106 http://localhost:3142/debian unstable/main amd64 libnamespace-autoclean-perl all 0.29-2 [13.5 kB] Get:107 http://localhost:3142/debian unstable/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:108 http://localhost:3142/debian unstable/main amd64 libeval-closure-perl all 0.14-3 [11.2 kB] Get:109 http://localhost:3142/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:110 http://localhost:3142/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:111 http://localhost:3142/debian unstable/main amd64 libparams-validationcompiler-perl all 0.31-1 [30.9 kB] Get:112 http://localhost:3142/debian unstable/main amd64 libmro-compat-perl all 0.15-2 [11.8 kB] Get:113 http://localhost:3142/debian unstable/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:114 http://localhost:3142/debian unstable/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:115 http://localhost:3142/debian unstable/main amd64 libxstring-perl amd64 0.005-2+b3 [8088 B] Get:116 http://localhost:3142/debian unstable/main amd64 libspecio-perl all 0.48-1 [142 kB] Get:117 http://localhost:3142/debian unstable/main amd64 libdatetime-locale-perl all 1:1.41-1 [3131 kB] Get:118 http://localhost:3142/debian unstable/main amd64 libdatetime-timezone-perl all 1:2.62-1+2024a [262 kB] Get:119 http://localhost:3142/debian unstable/main amd64 libdatetime-perl amd64 2:1.65-1+b1 [116 kB] Get:120 http://localhost:3142/debian unstable/main amd64 libdatetime-format-rfc3339-perl all 1.8.0-1 [8652 B] Get:121 http://localhost:3142/debian unstable/main amd64 libdbi-perl amd64 1.643-4+b2 [755 kB] Get:122 http://localhost:3142/debian unstable/main amd64 mysql-common all 5.8+1.1.0 [6636 B] Get:123 http://localhost:3142/debian unstable/main amd64 mariadb-common all 1:10.11.8-1 [26.4 kB] Get:124 http://localhost:3142/debian unstable/main amd64 libmariadb3 amd64 1:10.11.8-1 [176 kB] Get:125 http://localhost:3142/debian unstable/main amd64 libdbd-mysql-perl amd64 4.052-1+b2 [114 kB] Get:126 http://localhost:3142/debian unstable/main amd64 libdbd-sqlite3-perl amd64 1.74-1+b2 [175 kB] Get:127 http://localhost:3142/debian unstable/main amd64 libexpat1-dev amd64 2.6.2-1 [155 kB] Get:128 http://localhost:3142/debian unstable/main amd64 libexporter-tiny-perl all 1.006002-1 [38.7 kB] Get:129 http://localhost:3142/debian unstable/main amd64 libnauty-2.8.8 amd64 2.8.8+ds-5 [745 kB] Get:130 http://localhost:3142/debian unstable/main amd64 libgraph-nauty-perl amd64 0.5.1-2+b1 [15.3 kB] Get:131 http://localhost:3142/debian unstable/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:132 http://localhost:3142/debian unstable/main amd64 liburi-perl all 5.28-1 [98.6 kB] Get:133 http://localhost:3142/debian unstable/main amd64 libhtml-parser-perl amd64 3.82-1 [98.9 kB] Get:134 http://localhost:3142/debian unstable/main amd64 libio-pty-perl amd64 1:1.20-1+b1 [34.4 kB] Get:135 http://localhost:3142/debian unstable/main amd64 libipc-run-perl all 20231003.0-2 [101 kB] Get:136 http://localhost:3142/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get:137 http://localhost:3142/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get:138 http://localhost:3142/debian unstable/main amd64 libjs-sphinxdoc all 7.2.6-8 [150 kB] Get:139 http://localhost:3142/debian unstable/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Get:140 http://localhost:3142/debian unstable/main amd64 liblist-moreutils-xs-perl amd64 0.430-4+b1 [42.3 kB] Get:141 http://localhost:3142/debian unstable/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:142 http://localhost:3142/debian unstable/main amd64 libmodule-scandeps-perl all 1.35-1 [43.7 kB] Get:143 http://localhost:3142/debian unstable/main amd64 libpython3.11t64 amd64 3.11.9-1 [1960 kB] Get:144 http://localhost:3142/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1 [919 kB] Get:145 http://localhost:3142/debian unstable/main amd64 libpython3.11-dev amd64 3.11.9-1 [4513 kB] Get:146 http://localhost:3142/debian unstable/main amd64 libpython3-dev amd64 3.11.8-1 [9560 B] Get:147 http://localhost:3142/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.3-1 [1951 kB] Get:148 http://localhost:3142/debian unstable/main amd64 libpython3.12t64 amd64 3.12.3-1 [2107 kB] Get:149 http://localhost:3142/debian unstable/main amd64 libpython3.12-dev amd64 3.12.3-1 [5069 kB] Get:150 http://localhost:3142/debian unstable/main amd64 libpython3-all-dev amd64 3.11.8-1 [1072 B] Get:151 http://localhost:3142/debian unstable/main amd64 libsymspg2 amd64 2.4.0-1 [196 kB] Get:152 http://localhost:3142/debian unstable/main amd64 libsymspg-dev amd64 2.4.0-1 [36.3 kB] Get:153 http://localhost:3142/debian unstable/main amd64 libtext-diff-perl all 1.45-2 [27.2 kB] Get:154 http://localhost:3142/debian unstable/main amd64 libtext-unidecode-perl all 1.30-3 [101 kB] Get:155 http://localhost:3142/debian unstable/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:156 http://localhost:3142/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:157 http://localhost:3142/debian unstable/main amd64 libwww-curl-perl amd64 4.17-10+b2 [58.1 kB] Get:158 http://localhost:3142/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:159 http://localhost:3142/debian unstable/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:160 http://localhost:3142/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:161 http://localhost:3142/debian unstable/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-3 [313 kB] Get:162 http://localhost:3142/debian unstable/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:163 http://localhost:3142/debian unstable/main amd64 moreutils amd64 0.69-1 [62.8 kB] Get:164 http://localhost:3142/debian unstable/main amd64 python3.12 amd64 3.12.3-1 [659 kB] Get:165 http://localhost:3142/debian unstable/main amd64 python3-all amd64 3.11.8-1 [1056 B] Get:166 http://localhost:3142/debian unstable/main amd64 python3.11-dev amd64 3.11.9-1 [501 kB] Get:167 http://localhost:3142/debian unstable/main amd64 python3-dev amd64 3.11.8-1 [26.1 kB] Get:168 http://localhost:3142/debian unstable/main amd64 python3.12-dev amd64 3.12.3-1 [499 kB] Get:169 http://localhost:3142/debian unstable/main amd64 python3-all-dev amd64 3.11.8-1 [1072 B] Get:170 http://localhost:3142/debian unstable/main amd64 swig amd64 4.2.1-1 [1437 kB] Get:171 http://localhost:3142/debian unstable/main amd64 tree amd64 2.1.1-2 [54.6 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 61.5 MB in 13s (4889 kB/s) Selecting previously unselected package libsigsegv2:amd64. (Reading database ... 12662 files and directories currently installed.) Preparing to unpack .../libsigsegv2_2.14-1+b1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.14-1+b1) ... Setting up libsigsegv2:amd64 (2.14-1+b1) ... Selecting previously unselected package gawk. (Reading database ... 12672 files and directories currently installed.) Preparing to unpack .../gawk_1%3a5.2.1-2+b1_amd64.deb ... Unpacking gawk (1:5.2.1-2+b1) ... Selecting previously unselected package libpython3.11-minimal:amd64. Preparing to unpack .../libpython3.11-minimal_3.11.9-1_amd64.deb ... Unpacking libpython3.11-minimal:amd64 (3.11.9-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.2-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.9-1_amd64.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:amd64 (3.11.9-1) ... 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Setting up bsdextrautils (2.40.1-4) ... Setting up libparse-yapp-perl (1.21-3) ... Setting up libclass-inspector-perl (1.36-3) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libtext-glob-perl (0.11-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up libio-pty-perl (1:1.20-1+b1) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up gawk (1:5.2.1-2+b1) ... Setting up libclone-perl:amd64 (0.46-1+b2) ... Setting up libalgorithm-diff-perl (1.201-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libsub-identify-perl (0.14-3+b2) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libbrotli1:amd64 (1.1.0-2+b3) ... Setting up libheap-perl (0.80-5) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up libpython3.12-minimal:amd64 (3.12.3-1) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up libpsl5t64:amd64 (0.21.2-1.1) ... Setting up libnghttp2-14:amd64 (1.61.0-1+b1) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up libcliquer1 (1.21-3+b1) ... Setting up libclass-singleton-perl (1.6-2) ... Setting up libcom-err2:amd64 (1.47.1-1) ... Setting up file (1:5.45-3) ... Setting up libxstring-perl:amd64 (0.005-2+b3) ... Setting up libfakeroot:amd64 (1.34-1) ... Setting up libsub-install-perl (0.929-1) ... Setting up libelf1t64:amd64 (0.191-1+b1) ... Setting up libkrb5support0:amd64 (1.20.1-6+b1) ... Setting up libnumber-compare-perl (0.03-3) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Sun Jun 2 14:57:47 UTC 2024. Universal Time is now: Sun Jun 2 14:57:47 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up fakeroot (1.34-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up mariadb-common (1:10.11.8-1) ... update-alternatives: using /etc/mysql/mariadb.cnf to provide /etc/mysql/my.cnf (my.cnf) in auto mode Setting up libsymspg2:amd64 (2.4.0-1) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up autotools-dev (20220109.1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libalgorithm-c3-perl (0.11-2) ... Setting up libset-object-perl (1.42-1+b4) ... Setting up libexpat1-dev:amd64 (2.6.2-1) ... Setting up libnauty-2.8.8:amd64 (2.8.8+ds-5) ... Setting up libtext-diff-perl (1.45-2) ... Setting up libfile-find-rule-perl (0.34-3) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up tree (2.1.1-2) ... Setting up libvariable-magic-perl (0.64-1) ... Setting up autopoint (0.21-14) ... Setting up libb-hooks-op-check-perl:amd64 (0.22-3+b1) ... Setting up libmariadb3:amd64 (1:10.11.8-1) ... Setting up libipc-run-perl (20231003.0-2) ... Setting up liblist-moreutils-xs-perl (0.430-4+b1) ... Setting up libk5crypto3:amd64 (1.20.1-6+b1) ... Setting up libparams-util-perl (1.102-3) ... Setting up libtime-duration-perl (1.21-2) ... Setting up autoconf (2.71-3) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libsub-name-perl:amd64 (0.27-1+b2) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up libjson-perl (4.10000-1) ... Setting up bison (2:3.8.2+dfsg-1+b1) ... update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode Configuration file '/etc/protocols' ==> File on system created by you or by a script. ==> File also in package provided by package maintainer. ==> Using current old file as you requested. Configuration file '/etc/services' ==> File on system created by you or by a script. ==> File also in package provided by package maintainer. ==> Using current old file as you requested. Setting up librole-tiny-perl (2.002004-1) ... Setting up libfile-sharedir-perl (1.118-3) ... Setting up libcarp-clan-perl (6.08-2) ... Setting up netbase (6.4) ... Setting up libsub-quote-perl (2.006008-1) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libkrb5-3:amd64 (1.20.1-6+b1) ... Setting up libssh2-1t64:amd64 (1.11.0-5) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libexporter-tiny-perl (1.006002-1) ... Setting up libtext-unidecode-perl (1.30-3) ... Setting up libxml2:amd64 (2.12.7+dfsg-2) ... Setting up libmodule-scandeps-perl (1.35-1) ... Setting up liburi-perl (5.28-1) ... Setting up libdbi-perl:amd64 (1.643-4+b2) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up python3.12-minimal (3.12.3-1) ... Setting up gettext (0.21-14+b1) ... Setting up moreutils (0.69-1) ... Setting up libpython3.12-stdlib:amd64 (3.12.3-1) ... Setting up libsymspg-dev:amd64 (2.4.0-1) ... Setting up libtool (2.4.7-7) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libpython3.11-stdlib:amd64 (3.11.9-1) ... Setting up python3.12 (3.12.3-1) ... Setting up libpython3.11t64:amd64 (3.11.9-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libclass-c3-perl (0.35-2) ... Setting up libgraph-perl (1:0.9727-1) ... Setting up libdevel-callchecker-perl:amd64 (0.009-1) ... Setting up libbit-vector-perl:amd64 (7.4-3+b1) ... Setting up libdata-compare-perl (1.29-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libpython3.12t64:amd64 (3.12.3-1) ... Setting up dh-autoreconf (20) ... Setting up libpython3.11-dev:amd64 (3.11.9-1) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-6+b1) ... Setting up libdbd-mysql-perl:amd64 (4.052-1+b2) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up ucf (3.0043+nmu1) ... Setting up libjs-sphinxdoc (7.2.6-8) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-4) ... Setting up libhtml-parser-perl:amd64 (3.82-1) ... Setting up libdbd-sqlite3-perl:amd64 (1.74-1+b2) ... Setting up libmro-compat-perl (0.15-2) ... Setting up libgraph-nauty-perl (0.5.1-2+b1) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libpython3-stdlib:amd64 (3.11.8-1) ... Setting up libeval-closure-perl (0.14-3) ... Setting up python3.11 (3.11.9-1) ... Setting up libparams-validationcompiler-perl (0.31-1) ... Setting up libchemistry-opensmiles-perl (0.9.0-1) ... Setting up libpython3-dev:amd64 (3.11.8-1) ... Setting up libdate-calc-perl (6.4-2) ... Setting up python3.11-dev (3.11.9-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libparams-classify-perl:amd64 (0.015-2+b3) ... Setting up libcurl3t64-gnutls:amd64 (8.8.0-1) ... Setting up libwww-curl-perl:amd64 (4.17-10+b2) ... Setting up python3 (3.11.8-1) ... Setting up libpython3.12-dev:amd64 (3.12.3-1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libmodule-runtime-perl (0.016-2) ... Setting up libpython3-all-dev:amd64 (3.11.8-1) ... Setting up python3.12-dev (3.12.3-1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up python3-lib2to3 (3.12.3-3.1) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.12.3-3.1) ... python3.12: can't get files for byte-compilation Setting up python3-setuptools (68.1.2-2) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up python3-all (3.11.8-1) ... Setting up debhelper (13.15.3) ... Setting up libspecio-perl (0.48-1) ... Setting up python3-dev (3.11.8-1) ... Setting up libxml-simple-perl (2.25-2) ... Setting up libb-hooks-endofscope-perl (0.28-1) ... Setting up dh-python (6.20240422) ... Setting up python3-all-dev (3.11.8-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libnamespace-autoclean-perl (0.29-2) ... Setting up libdatetime-locale-perl (1:1.41-1) ... Setting up libdatetime-timezone-perl (1:2.62-1+2024a) ... Setting up libdatetime-perl (2:1.65-1+b1) ... Setting up libdatetime-format-rfc3339-perl (1.8.0-1) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.38-12) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-21-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) amd64 (x86_64) Toolchain package versions: binutils_2.42-4 dpkg-dev_1.22.6 g++-13_13.2.0-25 gcc-13_13.2.0-25 libc6-dev_2.38-12 libstdc++-13-dev_13.2.0-25 libstdc++6_14.1.0-1 linux-libc-dev_6.8.12-1 Package versions: adduser_3.137 apt_2.9.4 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-14 autotools-dev_20220109.1 base-files_13.2 base-passwd_3.6.3 bash_5.2.21-2+b1 binutils_2.42-4 binutils-common_2.42-4 binutils-x86-64-linux-gnu_2.42-4 bison_2:3.8.2+dfsg-1+b1 bsdextrautils_2.40.1-4 bsdutils_1:2.40.1-4 build-essential_12.10 bzip2_1.0.8-5.1 coreutils_9.4-3.1 cpp_4:13.2.0-7 cpp-13_13.2.0-25 cpp-13-x86-64-linux-gnu_13.2.0-25 cpp-x86-64-linux-gnu_4:13.2.0-7 dash_0.5.12-8 debconf_1.5.86 debhelper_13.15.3 debian-archive-keyring_2023.4 debianutils_5.17 dh-autoreconf_20 dh-python_6.20240422 dh-strip-nondeterminism_1.14.0-1 diffutils_1:3.10-1 dirmngr_2.2.43-7 dpkg_1.22.6 dpkg-dev_1.22.6 dwz_0.15-1+b1 eatmydata_131-2 fakeroot_1.34-1 file_1:5.45-3 findutils_4.9.0-6 g++_4:13.2.0-7 g++-13_13.2.0-25 g++-13-x86-64-linux-gnu_13.2.0-25 g++-x86-64-linux-gnu_4:13.2.0-7 gawk_1:5.2.1-2+b1 gcc_4:13.2.0-7 gcc-13_13.2.0-25 gcc-13-base_13.2.0-25 gcc-13-x86-64-linux-gnu_13.2.0-25 gcc-14-base_14.1.0-1 gcc-x86-64-linux-gnu_4:13.2.0-7 gettext_0.21-14+b1 gettext-base_0.21-14+b1 gnupg_2.2.43-7 gnupg-l10n_2.2.43-7 gnupg-utils_2.2.43-7 gpg_2.2.43-7 gpg-agent_2.2.43-7 gpg-wks-client_2.2.43-7 gpgconf_2.2.43-7 gpgsm_2.2.43-7 gpgv_2.2.43-7 grep_3.11-4 groff-base_1.23.0-4 gzip_1.12-1.1 hostname_3.23+nmu2 init-system-helpers_1.66 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2 libalgorithm-c3-perl_0.11-2 libalgorithm-diff-perl_1.201-1 libapt-pkg6.0t64_2.9.4 libarchive-zip-perl_1.68-1 libasan8_14.1.0-1 libassuan0_2.5.6-1+b1 libatomic1_14.1.0-1 libattr1_1:2.5.2-1 libaudit-common_1:3.1.2-2.1 libaudit1_1:3.1.2-2.1 libb-hooks-endofscope-perl_0.28-1 libb-hooks-op-check-perl_0.22-3+b1 libbinutils_2.42-4 libbit-vector-perl_7.4-3+b1 libblkid1_2.40.1-4 libbrotli1_1.1.0-2+b3 libbz2-1.0_1.0.8-5.1 libc-bin_2.38-12 libc-dev-bin_2.38-12 libc6_2.38-12 libc6-dev_2.38-12 libcap-ng0_0.8.5-1 libcap2_1:2.66-5 libcarp-clan-perl_6.08-2 libcc1-0_14.1.0-1 libchemistry-opensmiles-perl_0.9.0-1 libclass-c3-perl_0.35-2 libclass-data-inheritable-perl_0.08-3 libclass-inspector-perl_1.36-3 libclass-method-modifiers-perl_2.15-1 libclass-singleton-perl_1.6-2 libcliquer1_1.21-3+b1 libclone-perl_0.46-1+b2 libcom-err2_1.47.1-1 libcrypt-dev_1:4.4.36-4 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libgdbm6t64_1.23-5.1+b1 libgmp10_2:6.3.0+dfsg-2+b1 libgnutls30t64_3.8.5-3 libgomp1_14.1.0-1 libgpg-error0_1.49-2 libgprofng0_2.42-4 libgraph-nauty-perl_0.5.1-2+b1 libgraph-perl_1:0.9727-1 libgssapi-krb5-2_1.20.1-6+b1 libheap-perl_0.80-5 libhogweed6t64_3.9.1-2.2 libhtml-parser-perl_3.82-1 libhtml-tagset-perl_3.24-1 libhwasan0_14.1.0-1 libicu72_72.1-4+b1 libidn2-0_2.3.7-2 libio-pty-perl_1:1.20-1+b1 libipc-run-perl_20231003.0-2 libisl23_0.26-3+b2 libitm1_14.1.0-1 libjansson4_2.14-2+b2 libjs-jquery_3.6.1+dfsg+~3.5.14-1 libjs-sphinxdoc_7.2.6-8 libjs-underscore_1.13.4~dfsg+~1.11.4-3 libjson-perl_4.10000-1 libk5crypto3_1.20.1-6+b1 libkeyutils1_1.6.3-3 libkrb5-3_1.20.1-6+b1 libkrb5support0_1.20.1-6+b1 libksba8_1.6.6-1 libldap-2.5-0_2.5.17+dfsg-1 liblist-moreutils-perl_0.430-2 liblist-moreutils-xs-perl_0.430-4+b1 liblsan0_14.1.0-1 liblz4-1_1.9.4-2 liblzma5_5.6.1+really5.4.5-1 libmagic-mgc_1:5.45-3 libmagic1t64_1:5.45-3 libmariadb3_1:10.11.8-1 libmd0_1.1.0-2 libmodule-implementation-perl_0.09-2 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libpython3.12t64_3.12.3-1 libquadmath0_14.1.0-1 libreadline8t64_8.2-4 librole-tiny-perl_2.002004-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b4 libsasl2-2_2.1.28+dfsg1-6 libsasl2-modules-db_2.1.28+dfsg1-6 libseccomp2_2.5.5-1 libselinux1_3.5-2+b2 libsemanage-common_3.5-1 libsemanage2_3.5-1+b3 libsepol2_3.5-2+b1 libset-object-perl_1.42-1+b4 libsframe1_2.42-4 libsigsegv2_2.14-1+b1 libsmartcols1_2.40.1-4 libspecio-perl_0.48-1 libsqlite3-0_3.46.0-1 libssh2-1t64_1.11.0-5 libssl3t64_3.2.1-3 libstdc++-13-dev_13.2.0-25 libstdc++6_14.1.0-1 libsub-exporter-perl_0.990-1 libsub-exporter-progressive-perl_0.001013-3 libsub-identify-perl_0.14-3+b2 libsub-install-perl_0.929-1 libsub-name-perl_0.27-1+b2 libsub-quote-perl_2.006008-1 libsymspg-dev_2.4.0-1 libsymspg2_2.4.0-1 libsystemd0_256~rc3-7 libtasn1-6_4.19.0-3+b2 libtext-diff-perl_1.45-2 libtext-glob-perl_0.11-3 libtext-unidecode-perl_1.30-3 libtime-duration-perl_1.21-2 libtimedate-perl_2.3300-2 libtinfo6_6.5-2 libtool_2.4.7-7 libtry-tiny-perl_0.31-2 libtsan2_14.1.0-1 libubsan1_14.1.0-1 libuchardet0_0.0.8-1+b1 libudev1_256~rc3-7 libunistring5_1.2-1 liburi-perl_5.28-1 libuuid1_2.40.1-4 libvariable-magic-perl_0.64-1 libwww-curl-perl_4.17-10+b2 libxml-libxml-perl_2.0207+dfsg+really+2.0134-3 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-2 libxml2_2.12.7+dfsg-2 libxstring-perl_0.005-2+b3 libxxhash0_0.8.2-2+b1 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.8.12-1 login_1:4.13+dfsg1-4 m4_1.4.19-4 make_4.3-4.1 man-db_2.12.1-1 mariadb-common_1:10.11.8-1 mawk_1.3.4.20240123-1 media-types_10.1.0 moreutils_0.69-1 mysql-common_5.8+1.1.0 ncurses-base_6.5-2 ncurses-bin_6.5-2 netbase_6.4 passwd_1:4.13+dfsg1-4 patch_2.7.6-7 perl_5.38.2-5 perl-base_5.38.2-5 perl-modules-5.38_5.38.2-5 pinentry-curses_1.2.1-3+b2 po-debconf_1.0.21+nmu1 python3_3.11.8-1 python3-all_3.11.8-1 python3-all-dev_3.11.8-1 python3-dev_3.11.8-1 python3-distutils_3.12.3-3.1 python3-lib2to3_3.12.3-3.1 python3-minimal_3.11.8-1 python3-pkg-resources_68.1.2-2 python3-setuptools_68.1.2-2 python3.11_3.11.9-1 python3.11-dev_3.11.9-1 python3.11-minimal_3.11.9-1 python3.12_3.12.3-1 python3.12-dev_3.12.3-1 python3.12-minimal_3.12.3-1 readline-common_8.2-4 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.22 swig_4.2.1-1 sysvinit-utils_3.09-1 tar_1.35+dfsg-3 tree_2.1.1-2 tzdata_2024a-4 ucf_3.0043+nmu1 usr-is-merged_39 util-linux_2.40.1-4 xz-utils_5.6.1+really5.4.5-1 zlib1g_1:1.3.dfsg+really1.3.1-1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: cod-tools Binary: cod-tools, libcexceptions-dev, libcexceptions0, libcod-tools-perl, libcodcif-dev, libcodcif3, libgetoptions-dev, libgetoptions0, python3-pycodcif Architecture: any Version: 3.10.0+dfsg-1 Maintainer: Debian Science Maintainers Uploaders: Andrius Merkys , Homepage: https://wiki.crystallography.net/cod-tools Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/science-team/cod-tools Vcs-Git: https://salsa.debian.org/science-team/cod-tools.git Testsuite: autopkgtest Testsuite-Triggers: diffutils, findutils, libchemistry-opensmiles-perl, libgraph-perl, libtext-diff-perl, perl, rsync, tree Build-Depends: bison, debhelper-compat (= 13), dh-python, gawk, libchemistry-opensmiles-perl , libclone-perl , libdata-compare-perl , libdate-calc-perl , libdatetime-format-rfc3339-perl , libdbd-mysql-perl , libdbd-sqlite3-perl , libdbi-perl , libdigest-sha-perl , libgraph-nauty-perl , libgraph-perl , libhtml-parser-perl , libjson-perl , liblist-moreutils-perl, libmodule-scandeps-perl, libparse-yapp-perl, libsymspg-dev, libtext-diff-perl , libtext-unidecode-perl , libwww-curl-perl , libxml-simple-perl , moreutils, perl, python3-all-dev, python3-dev, python3-setuptools, swig, tree Package-List: cod-tools deb science optional arch=any libcexceptions-dev deb libdevel optional arch=any libcexceptions0 deb libs optional arch=any libcod-tools-perl deb perl optional arch=any libcodcif-dev deb libdevel optional arch=any libcodcif3 deb libs optional arch=any libgetoptions-dev deb libdevel optional arch=any libgetoptions0 deb libs optional arch=any python3-pycodcif deb python optional arch=any Checksums-Sha1: aea0ab20ab0bd342216036da0b808183b121ee7c 25495892 cod-tools_3.10.0+dfsg.orig.tar.xz f7d48e8a183acf648b256e1bccb60afd228e9dc2 14264 cod-tools_3.10.0+dfsg-1.debian.tar.xz Checksums-Sha256: 9ec71c078c5a847620bb11c98e3a14e85e1807847ee234308f9ebd3caa62e157 25495892 cod-tools_3.10.0+dfsg.orig.tar.xz 926afb72a941f8d5d099b9d9495cf4fc11ef693fcab1b12834b5003f2808f53e 14264 cod-tools_3.10.0+dfsg-1.debian.tar.xz Files: 0c9eb494df0f73e61fcbcaa40c6cf8f3 25495892 cod-tools_3.10.0+dfsg.orig.tar.xz 35392096d8d6fb4901f367bcad5f4bea 14264 cod-tools_3.10.0+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEdyKS9veshfrgQdQe5fQ/nCc08ocFAmZYKxcSHG1lcmt5c0Bk ZWJpYW4ub3JnAAoJEOX0P5wnNPKH/cQP/1PpNqs942Xl9iDIXb5mDTZ70TngNU4i 6Sb8+1j9+C/DVPJfGvxS5YmYUFwerSbkc4j3kvn0qbnTeq8E6f6PddwMFIV4cHRP uUqTeibIHWMFKBG5QH7v94h9Vv/5jxJD9smwnfPPR+dbBdjMZ3FbSGCHoA1+NoDM EVRcEKd9jTpSDGXZGGmhhBZ1fc1J8H2ZCVhMMh5tVHygamNqfi+ZVIaVhApEGFi1 UHGG0sGvgdp6KmjMO1JZ+2vVKmpDAaSua71jr3oNe7NuMnATr/3EI5Gmfp3DaMWg NpZz8uO/sv1guUhJxsRG8wqT5RcU1/0k5fU1OQKjxI6jdOD5lwMa/0EkrK0MCtc/ iApN2C/yoZqEtTsMjQWdoUQ1pKbMMUe9HCTi0U0pl+96NxEHTvWNCRtUnnF6+c3p MEQL5uLem3JqExdoB5t8BjmA7ri5AXRub1yNQT9cr6K4O8dWpHkd/ZS6tN3j9Pq4 I5T0a1TD/K+rjnbLDBAoeqBNRKsERoy3Iu1IlKk41eSj8kg5tzU2EJ/XQVJJlfvF RtOfZnbQuySAPWXOT0iHzJtbz2CnJNT6AseLQjmXNGej0ZuYQSLU9L4Yb9B1hA1A se5jIl41t4HMaYEO9EU+YydxNI3x+S8vSk6f6zAq8HOaw+Fdl2I1W8mbnj1XlNzy T4p+VcC3I86i =PPWF -----END PGP SIGNATURE----- gpgv: Signature made Thu May 30 07:30:31 2024 UTC gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./cod-tools_3.10.0+dfsg-1.dsc: no acceptable signature found dpkg-source: info: extracting cod-tools in /<> dpkg-source: info: unpacking cod-tools_3.10.0+dfsg.orig.tar.xz dpkg-source: info: unpacking cod-tools_3.10.0+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying codcif-svnversion.patch dpkg-source: info: applying hardening.patch dpkg-source: info: applying disable-test-network-access.patch dpkg-source: info: applying use-system-spglib.patch Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Timed Build Commands | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/starting-build-commands/no-network cod-tools_3.10.0+dfsg-1 sid amd64 -------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/starting-build-commands/no-network cod-tools_3.10.0+dfsg-1 sid amd64'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_GB.UTF-8 LANGUAGE=en_GB:en LC_ALL=C.UTF-8 LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so LOGNAME=debomatic PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/<> SCHROOT_ALIAS_NAME=sid-amd64-debomatic SCHROOT_CHROOT_NAME=sid-amd64-debomatic SCHROOT_COMMAND=env SCHROOT_GID=110 SCHROOT_GROUP=sbuild SCHROOT_SESSION_ID=sid-amd64-debomatic-cb278c95-6aa7-4ff4-9830-5fc57c70685b SCHROOT_UID=1002 SCHROOT_USER=debomatic SHELL=/bin/sh USER=debomatic dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -Zxz dpkg-buildpackage: info: source package cod-tools dpkg-buildpackage: info: source version 3.10.0+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source -Zxz --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3 --no-parallel debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean make -j1 distclean make[2]: Entering directory '/<>' rm -f *~ rm -f ./tests/outputs/cif-to-utf8_001.diff ./tests/outputs/cif-to-utf8_002.diff ./tests/outputs/cif-to-utf8_003.diff ./tests/outputs/cif-to-utf8_004.diff ./tests/outputs/cif-to-utf8_005.diff ./tests/outputs/cif-to-utf8_006.diff ./tests/outputs/cif-to-utf8_007.diff ./tests/outputs/cif-to-utf8_008.diff ./tests/outputs/cif-to-utf8_009.diff ./tests/outputs/cif-to-utf8_010.diff ./tests/outputs/cif-to-utf8_011.diff ./tests/outputs/cif-to-utf8_012.diff ./tests/outputs/cif2cod_001.diff ./tests/outputs/cif2cod_002.diff ./tests/outputs/cif2cod_003.diff ./tests/outputs/cif2cod_004.diff ./tests/outputs/cif2cod_005.diff ./tests/outputs/cif2cod_006.diff ./tests/outputs/cif2cod_007.diff 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doc/man/cif_list_tags.1 doc/man/cifparse.1 doc/man/cifvalues.1 rm -f version.h rm -f src/lib/perl5/COD/ToolsVersion.pm scripts/cod-tools-version rm -f scripts/.cod-tools-version.d rm -f /<>/src/lib/perl5/COD/Formulae/Parser/AdHoc.pm /<>/src/lib/perl5/COD/Formulae/Parser/IUCr.pm /<>/src/lib/perl5/COD/CIF/Parser/Yapp.pm /<>/src/lib/perl5/COD/CIF/Parser/Bison.pm /<>/src/lib/perl5/COD/SPGLib.pm /<>/src/components/pycodcif/build/python3/pycodcif/pycodcif.py scripts/cod-tools-version src/lib/perl5/COD/ToolsVersion.pm rm -f /<>/src/lib/perl5/auto/COD/CIF/Parser/Bison/Bison.so /<>/src/lib/perl5/auto/COD/SPGLib/SPGLib.so rm -f scripts/.cif-to-utf8.d scripts/.cif2cod.d scripts/.cif2csv.d scripts/.cif2json.d scripts/.cif2rdf.d scripts/.cif2ref.d scripts/.cif2xyz.d scripts/.cif_CODify.d scripts/.cif_Fcalc.d scripts/.cif_adjust_journal_name_volume.d scripts/.cif_automorphism.d scripts/.cif_bounding_box.d scripts/.cif_cell_contents.d scripts/.cif_classify.d scripts/.cif_cod_check.d 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scripts/.cif_reformat_uppercase_author_names.d scripts/.cif_select.d scripts/.cif_set_value.d scripts/.cif_sort_atoms.d scripts/.cif_split.d scripts/.cif_split_primitive.d scripts/.cif_symop_apply.d scripts/.cif_tags_in_list.d scripts/.cif_tcod_tree.d scripts/.cif_validate.d scripts/.cif_values.d scripts/.cod-tools-version.d scripts/.cod2rdf.d scripts/.cod_fetch.d scripts/.cod_manage_related.d scripts/.codcif2sdf.d scripts/.codxyz2fract.d scripts/.codxyz2ortho.d scripts/.cosets.d scripts/.ddl1-to-ddlm.d scripts/.ddlm_validate.d scripts/.dic2markdown.d scripts/.fetch_cif_dict.d scripts/.find_numbers.d scripts/.formula_sum.d scripts/.json2cif.d scripts/.molcif2sdf.d scripts/.msg_parse.d scripts/.oqmd2cif.d scripts/.sdf_add_cod_data.d scripts/.ssg3d.d scripts/.ssg_symop_canonical.d scripts/.ssg_symop_check.d scripts/.ssg_symop_matrices.d scripts/.ssg_symop_string.d scripts/.syminv.d scripts/.symmul.d scripts/.symop_build_spacegroup.d scripts/.symops.d scripts/.utf8-to-cif.d rm -f tests/scripts/.cif_printout_Python.d tests/scripts/.codxyz2fract-direct.d tests/scripts/.codxyz2ortho-direct.d tests/scripts/.gj_elimination.d tests/scripts/.gj_rational_elimination.d rm -f .diff.depend .script.depend for DIR in src/ ; do \ make -C $DIR distclean; \ done make[3]: Entering directory '/<>/src' make[4]: Entering directory '/<>/src/externals' make[5]: Entering directory '/<>/src/externals/cexceptions' rm -f *~ rm -f obj/allocx.o obj/cexceptions.o obj/cxprintf.o obj/stdiox.o obj/stringx.o rm -f obj/subsystem_a.o obj/subsystem_b.o rm -f lib/libcexceptions.a lib/libcexceptions.so.0.01 bin/fmemopenx bin/fopenx bin/tcreallocx bin/texceptions bin/tfinaly bin/tstrdupx bin/tsubsystems rm -f .allocx.d .cexceptions.d .cxprintf.d .stdiox.d .stringx.d tests/programs/.fmemopenx.d tests/programs/.fopenx.d tests/programs/.tcreallocx.d tests/programs/.texceptions.d tests/programs/.tfinaly.d tests/programs/.tstrdupx.d tests/programs/.tsubsystems.d tests/.subsystem_a.d tests/.subsystem_b.d rm -f outputs/fmemopenx.diff outputs/fopenx.diff outputs/tcreallocx.diff outputs/texceptions.diff outputs/tfinaly.diff outputs/tstrdupx.diff outputs/tsubsystems.diff make[5]: Leaving directory '/<>/src/externals/cexceptions' make[5]: Entering directory '/<>/src/externals/getoptions' rm -f outputs/topt_001.diff outputs/topt_002.diff outputs/topt_003.diff outputs/topt_004.diff outputs/topt_005.diff rm -f *~ rm -f .diff.depend rm -f obj/getoptions.o rm -f rm -f lib/libgetoptions.a lib/libgetoptions.so.0.01 tests/bin/topt rm -f .getoptions.d tests/programs/.topt.d make[5]: Leaving directory '/<>/src/externals/getoptions' make[4]: Leaving directory '/<>/src/externals' make[4]: Entering directory '/<>/src/components' make[5]: Entering directory '/<>/src/components/codcif' rm -f *~ rm -f ./obj/cif.o ./obj/cif2_lexer.o ./obj/cif_compiler.o ./obj/cif_grammar_flex.o ./obj/cif_lex_buffer.o ./obj/cif_lexer.o ./obj/cif_options.o ./obj/ciflist.o ./obj/cifmessage.o ./obj/ciftable.o ./obj/cifvalue.o 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'/<>/src/lib/perl5/COD/Formulae' make[8]: Entering directory '/<>/src/lib/perl5/COD/Formulae/Parser' make[9]: Entering directory '/<>/src/lib/perl5/COD/Formulae/Parser/AdHoc' rm -f tests/outputs/formula_parser_test_001.diff tests/outputs/formula_parser_test_002.diff tests/outputs/formula_parser_test_003.diff tests/outputs/formula_parser_test_004.diff rm -f rm -f lib/COD/Formulae/Parser/AdHoc.pm *.output make[9]: Leaving directory '/<>/src/lib/perl5/COD/Formulae/Parser/AdHoc' make[9]: Entering directory '/<>/src/lib/perl5/COD/Formulae/Parser/IUCr' rm -f tests/outputs/formula_parser_test_001.diff tests/outputs/formula_parser_test_002.diff tests/outputs/formula_parser_test_003.diff tests/outputs/formula_parser_test_004.diff rm -f rm -f lib/COD/Formulae/Parser/IUCr.pm *.output make[9]: Leaving directory '/<>/src/lib/perl5/COD/Formulae/Parser/IUCr' make[8]: Leaving directory '/<>/src/lib/perl5/COD/Formulae/Parser' make[7]: Leaving directory '/<>/src/lib/perl5/COD/Formulae' make[7]: Entering directory '/<>/src/lib/perl5/COD/SPGLib' rm -f source_wrap.c source.o source_wrap.o *~ *.o rm -f rm -f rm -f lib/auto/COD/SPGLib/SPGLib.so lib/COD/SPGLib.pm make[7]: Leaving directory '/<>/src/lib/perl5/COD/SPGLib' make[6]: Leaving directory '/<>/src/lib/perl5/COD' make[5]: Leaving directory '/<>/src/lib/perl5' make[4]: Leaving directory '/<>/src/lib' make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>' rm -rf .pybuild tmp-* make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--no-parallel dh_clean -O--no-parallel dpkg-source -Zxz -b . dpkg-source: warning: upstream signing key but no upstream tarball signature dpkg-source: info: using source format '3.0 (quilt)' dpkg-source: info: building cod-tools using existing ./cod-tools_3.10.0+dfsg.orig.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: building cod-tools in cod-tools_3.10.0+dfsg-1.debian.tar.xz dpkg-source: info: building cod-tools in cod-tools_3.10.0+dfsg-1.dsc debian/rules binary dh binary --with python3 --no-parallel dh_update_autotools_config -O--no-parallel dh_autoreconf -O--no-parallel dh_auto_configure -O--no-parallel dh_auto_build -O--no-parallel make -j1 "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>' tools/mkperldepend scripts/cif-to-utf8 > scripts/.cif-to-utf8.d tools/mkperldepend scripts/cif2cod > scripts/.cif2cod.d tools/mkperldepend scripts/cif2csv > scripts/.cif2csv.d tools/mkperldepend scripts/cif2json > scripts/.cif2json.d tools/mkperldepend scripts/cif2rdf > scripts/.cif2rdf.d tools/mkperldepend scripts/cif2ref > scripts/.cif2ref.d tools/mkperldepend scripts/cif2xyz > scripts/.cif2xyz.d tools/mkperldepend scripts/cif_CODify > scripts/.cif_CODify.d tools/mkperldepend scripts/cif_Fcalc > scripts/.cif_Fcalc.d tools/mkperldepend scripts/cif_adjust_journal_name_volume > scripts/.cif_adjust_journal_name_volume.d tools/mkperldepend scripts/cif_automorphism > scripts/.cif_automorphism.d tools/mkperldepend scripts/cif_bounding_box > scripts/.cif_bounding_box.d tools/mkperldepend scripts/cif_cell_contents > scripts/.cif_cell_contents.d tools/mkperldepend scripts/cif_classify > scripts/.cif_classify.d tools/mkperldepend scripts/cif_cod_check > scripts/.cif_cod_check.d tools/mkperldepend scripts/cif_cod_deposit > scripts/.cif_cod_deposit.d tools/mkperldepend scripts/cif_cod_numbers > scripts/.cif_cod_numbers.d tools/mkperldepend scripts/cif_compare_dics > scripts/.cif_compare_dics.d tools/mkperldepend scripts/cif_correct_tags > scripts/.cif_correct_tags.d tools/mkperldepend scripts/cif_create_AMCSD_pressure_temp_tags > scripts/.cif_create_AMCSD_pressure_temp_tags.d tools/mkperldepend scripts/cif_ddl1_dic_check > scripts/.cif_ddl1_dic_check.d tools/mkperldepend scripts/cif_ddlm_dic_check > scripts/.cif_ddlm_dic_check.d tools/mkperldepend scripts/cif_ddlm_dic_print > scripts/.cif_ddlm_dic_print.d tools/mkperldepend scripts/cif_dictionary_tags > scripts/.cif_dictionary_tags.d tools/mkperldepend scripts/cif_diff > scripts/.cif_diff.d tools/mkperldepend scripts/cif_distances > scripts/.cif_distances.d tools/mkperldepend scripts/cif_estimate_Z > scripts/.cif_estimate_Z.d tools/mkperldepend scripts/cif_eval_numbers > scripts/.cif_eval_numbers.d tools/mkperldepend scripts/cif_fillcell > scripts/.cif_fillcell.d tools/mkperldepend scripts/cif_filter > scripts/.cif_filter.d tools/mkperldepend scripts/cif_find_duplicates > scripts/.cif_find_duplicates.d tools/mkperldepend scripts/cif_find_symmetry > scripts/.cif_find_symmetry.d tools/mkperldepend scripts/cif_fix_values > scripts/.cif_fix_values.d tools/mkperldepend scripts/cif_guess_AMCSD_atom_types > scripts/.cif_guess_AMCSD_atom_types.d tools/mkperldepend scripts/cif_hkl_COD_number > scripts/.cif_hkl_COD_number.d tools/mkperldepend scripts/cif_hkl_check > scripts/.cif_hkl_check.d tools/mkperldepend scripts/cif_mark_disorder > scripts/.cif_mark_disorder.d tools/mkperldepend scripts/cif_merge > scripts/.cif_merge.d tools/mkperldepend scripts/cif_molecule > scripts/.cif_molecule.d tools/mkperldepend scripts/cif_mpod_v1_to_v2 > scripts/.cif_mpod_v1_to_v2.d tools/mkperldepend scripts/cif_mpod_v1_to_v3 > scripts/.cif_mpod_v1_to_v3.d tools/mkperldepend scripts/cif_mpod_v2_to_v1 > scripts/.cif_mpod_v2_to_v1.d tools/mkperldepend scripts/cif_mpod_v3_to_v1 > scripts/.cif_mpod_v3_to_v1.d tools/mkperldepend scripts/cif_overlay > scripts/.cif_overlay.d tools/mkperldepend scripts/cif_p1 > scripts/.cif_p1.d tools/mkperldepend scripts/cif_parse > scripts/.cif_parse.d tools/mkperldepend scripts/cif_reduce_Niggli > scripts/.cif_reduce_Niggli.d tools/mkperldepend scripts/cif_reduce_cell > scripts/.cif_reduce_cell.d tools/mkperldepend scripts/cif_reformat_AMCSD_author_names > scripts/.cif_reformat_AMCSD_author_names.d tools/mkperldepend scripts/cif_reformat_pubmed_author_names > scripts/.cif_reformat_pubmed_author_names.d tools/mkperldepend scripts/cif_reformat_uppercase_author_names > scripts/.cif_reformat_uppercase_author_names.d tools/mkperldepend scripts/cif_select > scripts/.cif_select.d tools/mkperldepend scripts/cif_set_value > scripts/.cif_set_value.d tools/mkperldepend scripts/cif_sort_atoms > scripts/.cif_sort_atoms.d tools/mkperldepend scripts/cif_split > scripts/.cif_split.d tools/mkperldepend scripts/cif_split_primitive > scripts/.cif_split_primitive.d tools/mkperldepend scripts/cif_symop_apply > scripts/.cif_symop_apply.d tools/mkperldepend scripts/cif_tags_in_list > scripts/.cif_tags_in_list.d tools/mkperldepend scripts/cif_tcod_tree > scripts/.cif_tcod_tree.d tools/mkperldepend scripts/cif_validate > scripts/.cif_validate.d tools/mkperldepend scripts/cif_values > scripts/.cif_values.d sed 's/@VERSION@/3.10.0/' scripts/cod-tools-version.in > scripts/cod-tools-version chmod 755 scripts/cod-tools-version tools/mkperldepend scripts/cod-tools-version > scripts/.cod-tools-version.d tools/mkperldepend scripts/cod2rdf > scripts/.cod2rdf.d tools/mkperldepend scripts/cod_fetch > scripts/.cod_fetch.d tools/mkperldepend scripts/cod_manage_related > scripts/.cod_manage_related.d tools/mkperldepend scripts/codcif2sdf > scripts/.codcif2sdf.d tools/mkperldepend scripts/codxyz2fract > scripts/.codxyz2fract.d tools/mkperldepend scripts/codxyz2ortho > scripts/.codxyz2ortho.d tools/mkperldepend scripts/cosets > scripts/.cosets.d tools/mkperldepend scripts/ddl1-to-ddlm > scripts/.ddl1-to-ddlm.d tools/mkperldepend scripts/ddlm_validate > scripts/.ddlm_validate.d tools/mkperldepend scripts/dic2markdown > scripts/.dic2markdown.d tools/mkperldepend scripts/fetch_cif_dict > scripts/.fetch_cif_dict.d tools/mkperldepend scripts/find_numbers > scripts/.find_numbers.d tools/mkperldepend scripts/formula_sum > scripts/.formula_sum.d tools/mkperldepend scripts/json2cif > scripts/.json2cif.d tools/mkperldepend scripts/molcif2sdf > scripts/.molcif2sdf.d tools/mkperldepend scripts/msg_parse > scripts/.msg_parse.d tools/mkperldepend scripts/oqmd2cif > scripts/.oqmd2cif.d tools/mkperldepend scripts/sdf_add_cod_data > scripts/.sdf_add_cod_data.d tools/mkperldepend scripts/ssg3d > scripts/.ssg3d.d tools/mkperldepend scripts/ssg_symop_canonical > scripts/.ssg_symop_canonical.d tools/mkperldepend scripts/ssg_symop_check > scripts/.ssg_symop_check.d tools/mkperldepend scripts/ssg_symop_matrices > scripts/.ssg_symop_matrices.d tools/mkperldepend scripts/ssg_symop_string > scripts/.ssg_symop_string.d tools/mkperldepend scripts/syminv > scripts/.syminv.d tools/mkperldepend scripts/symmul > scripts/.symmul.d tools/mkperldepend scripts/symop_build_spacegroup > scripts/.symop_build_spacegroup.d tools/mkperldepend scripts/symops > scripts/.symops.d tools/mkperldepend scripts/utf8-to-cif > scripts/.utf8-to-cif.d tools/mkperldepend tests/scripts/cif_printout_Python > tests/scripts/.cif_printout_Python.d tools/mkperldepend tests/scripts/codxyz2fract-direct > tests/scripts/.codxyz2fract-direct.d tools/mkperldepend tests/scripts/codxyz2ortho-direct > tests/scripts/.codxyz2ortho-direct.d tools/mkperldepend tests/scripts/gj_elimination > tests/scripts/.gj_elimination.d tools/mkperldepend tests/scripts/gj_rational_elimination > tests/scripts/.gj_rational_elimination.d find -L ./tests/cases ./tests/shtests -type f | grep -v -e './tests/cases/.*[.]tst$' -e '.*[.]chk$' | sort | \ tools/mkdiffdepend --script-depend .script.depend --output ./tests/outputs > .diff.depend make -C /<>/src/externals/cexceptions/ \ lib/libcexceptions.a make[2]: Entering directory '/<>/src/externals/cexceptions' cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -M -MG tests/subsystem_b.c > tests/.subsystem_b.d cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -M -MG tests/subsystem_a.c > tests/.subsystem_a.d cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -M -MG tests/programs/tsubsystems.c > tests/programs/.tsubsystems.d cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -M -MG tests/programs/tstrdupx.c > tests/programs/.tstrdupx.d cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -M -MG tests/programs/tfinaly.c > tests/programs/.tfinaly.d cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -M -MG tests/programs/texceptions.c > tests/programs/.texceptions.d cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -M -MG tests/programs/tcreallocx.c > tests/programs/.tcreallocx.d cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -M -MG tests/programs/fopenx.c > tests/programs/.fopenx.d cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -M -MG tests/programs/fmemopenx.c > tests/programs/.fmemopenx.d cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -M -MG stringx.c > .stringx.d cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -M -MG stdiox.c > .stdiox.d cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -M -MG cxprintf.c > .cxprintf.d cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -M -MG cexceptions.c > .cexceptions.d cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -M -MG allocx.c > .allocx.d cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -c allocx.c -o obj/allocx.o cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -c cexceptions.c -o obj/cexceptions.o cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -c cxprintf.c -o obj/cxprintf.o cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -c stdiox.c -o obj/stdiox.o cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -c stringx.c -o obj/stringx.o ar cr lib/libcexceptions.a obj/allocx.o obj/cexceptions.o obj/cxprintf.o obj/stdiox.o obj/stringx.o make[2]: Leaving directory '/<>/src/externals/cexceptions' make -C /<>/src/externals/cexceptions/ all make[2]: Entering directory '/<>/src/externals/cexceptions' cc -shared -Xlinker -soname=libcexceptions.so.0 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -Wl,-z,relro -Wl,-z,now -L../cexceptions/lib -o lib/libcexceptions.so.0.01 obj/allocx.o obj/cexceptions.o obj/cxprintf.o obj/stdiox.o obj/stringx.o cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -c tests/subsystem_a.c -o obj/subsystem_a.o cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -c tests/subsystem_b.c -o obj/subsystem_b.o cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -Wl,-z,relro -Wl,-z,now -L../cexceptions/lib tests/programs/fmemopenx.c obj/subsystem_a.o obj/subsystem_b.o lib/libcexceptions.a -o bin/fmemopenx -lm -lcexceptions cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -Wl,-z,relro -Wl,-z,now -L../cexceptions/lib tests/programs/fopenx.c obj/subsystem_a.o obj/subsystem_b.o lib/libcexceptions.a -o bin/fopenx -lm -lcexceptions cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -Wl,-z,relro -Wl,-z,now -L../cexceptions/lib tests/programs/tcreallocx.c obj/subsystem_a.o obj/subsystem_b.o lib/libcexceptions.a -o bin/tcreallocx -lm -lcexceptions cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -Wl,-z,relro -Wl,-z,now -L../cexceptions/lib tests/programs/texceptions.c obj/subsystem_a.o obj/subsystem_b.o lib/libcexceptions.a -o bin/texceptions -lm -lcexceptions cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -Wl,-z,relro -Wl,-z,now -L../cexceptions/lib tests/programs/tfinaly.c obj/subsystem_a.o obj/subsystem_b.o lib/libcexceptions.a -o bin/tfinaly -lm -lcexceptions cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -Wl,-z,relro -Wl,-z,now -L../cexceptions/lib tests/programs/tstrdupx.c obj/subsystem_a.o obj/subsystem_b.o lib/libcexceptions.a -o bin/tstrdupx -lm -lcexceptions cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I./tests -DHAS_VSNPRINTF -I../cexceptions -fPIC -Wl,-z,relro -Wl,-z,now -L../cexceptions/lib tests/programs/tsubsystems.c obj/subsystem_a.o obj/subsystem_b.o lib/libcexceptions.a -o bin/tsubsystems -lm -lcexceptions make[2]: Leaving directory '/<>/src/externals/cexceptions' make -C /<>/src/externals/getoptions/ \ lib/libgetoptions.a make[2]: Entering directory '/<>/src/externals/getoptions' cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I../cexceptions -fPIC -M -MG tests/programs/topt.c > tests/programs/.topt.d cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I../cexceptions -fPIC -M -MG getoptions.c > .getoptions.d cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I../cexceptions -fPIC -c getoptions.c -o obj/getoptions.o ar cr lib/libgetoptions.a obj/getoptions.o make[2]: Leaving directory '/<>/src/externals/getoptions' make -C /<>/src/externals/getoptions/ all make[2]: Entering directory '/<>/src/externals/getoptions' cc -shared -Xlinker -soname=libgetoptions.so.0 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I../cexceptions -fPIC -Wl,-z,relro -Wl,-z,now -L../cexceptions/lib -o lib/libgetoptions.so.0.01 obj/getoptions.o cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -Wall -I. -I../cexceptions -fPIC -Wl,-z,relro -Wl,-z,now -L../cexceptions/lib tests/programs/topt.c lib/libgetoptions.a -o tests/bin/topt -lm -lcexceptions make[2]: Leaving directory '/<>/src/externals/getoptions' make -C /<>/src/components/codcif/ \ lib/libcodcif.a make[2]: Entering directory '/<>/src/components/codcif' gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -M -MG \ programs/cifvalues.c | sed -e 's,^cifvalues.o:,./obj/programs/cifvalues.o:,' > programs/.cifvalues.d gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -M -MG \ programs/cifparse.c | sed -e 's,^cifparse.o:,./obj/programs/cifparse.o:,' > programs/.cifparse.d gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -M -MG \ programs/cif_list_tags.c | sed -e 's,^cif_list_tags.o:,./obj/programs/cif_list_tags.o:,' > programs/.cif_list_tags.d gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -M -MG \ datablock.c | sed -e 's,^datablock.o:,./obj/datablock.o:,' > .datablock.d gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -M -MG \ common.c | sed -e 's,^common.o:,./obj/common.o:,' > .common.d gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -M -MG \ cifvalue.c | sed -e 's,^cifvalue.o:,./obj/cifvalue.o:,' > .cifvalue.d gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -M -MG \ ciftable.c | sed -e 's,^ciftable.o:,./obj/ciftable.o:,' > .ciftable.d gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -M -MG \ cifmessage.c | sed -e 's,^cifmessage.o:,./obj/cifmessage.o:,' > .cifmessage.d gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -M -MG \ ciflist.c | sed -e 's,^ciflist.o:,./obj/ciflist.o:,' > .ciflist.d gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -M -MG \ cif_options.c | sed -e 's,^cif_options.o:,./obj/cif_options.o:,' > .cif_options.d gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -M -MG \ cif_lexer.c | sed -e 's,^cif_lexer.o:,./obj/cif_lexer.o:,' > .cif_lexer.d gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -M -MG \ cif_lex_buffer.c | sed -e 's,^cif_lex_buffer.o:,./obj/cif_lex_buffer.o:,' > .cif_lex_buffer.d gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -M -MG \ cif_grammar_flex.c | sed -e 's,^cif_grammar_flex.o:,./obj/cif_grammar_flex.o:,' > .cif_grammar_flex.d gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -M -MG \ cif_compiler.c | sed -e 's,^cif_compiler.o:,./obj/cif_compiler.o:,' > .cif_compiler.d gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -M -MG \ cif2_lexer.c | sed -e 's,^cif2_lexer.o:,./obj/cif2_lexer.o:,' > .cif2_lexer.d gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -M -MG \ cif.c | sed -e 's,^cif.o:,./obj/cif.o:,' > .cif.d gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -c cif.c -o obj/cif.o bison -y -v -d -p cif2 --file-prefix cif2_grammar cif2_grammar.y cif2_grammar.y:37.1-5: warning: POSIX Yacc does not support %code [-Wyacc] 37 | %code requires { | ^~~~~ gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -c cif2_lexer.c -o obj/cif2_lexer.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -c cif_compiler.c -o obj/cif_compiler.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -c cif_grammar_flex.c -o obj/cif_grammar_flex.o bison -y -v -d -p cif --file-prefix cif_grammar cif_grammar.y cif_grammar.y:36.1-5: warning: POSIX Yacc does not support %code [-Wyacc] 36 | %code requires { | ^~~~~ gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -c cif_lex_buffer.c -o obj/cif_lex_buffer.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -c cif_lexer.c -o obj/cif_lexer.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -c cif_options.c -o obj/cif_options.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -c ciflist.c -o obj/ciflist.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -c cifmessage.c -o obj/cifmessage.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -c ciftable.c -o obj/ciftable.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -c cifvalue.c -o obj/cifvalue.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -c common.c -o obj/common.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -c datablock.c -o obj/datablock.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -c cif2_grammar.tab.c -o obj/cif2_grammar.tab.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -c cif_grammar.tab.c -o obj/cif_grammar.tab.o ar cr lib/libcodcif.a obj/cif.o obj/cif2_lexer.o obj/cif_compiler.o obj/cif_grammar_flex.o obj/cif_lex_buffer.o obj/cif_lexer.o obj/cif_options.o obj/ciflist.o obj/cifmessage.o obj/ciftable.o obj/cifvalue.o obj/common.o obj/datablock.o obj/cif2_grammar.tab.o obj/cif_grammar.tab.o make[2]: Leaving directory '/<>/src/components/codcif' make -C /<>/src/components/codcif/ all make[2]: Entering directory '/<>/src/components/codcif' gcc -shared -Xlinker -soname=libcodcif.so.3 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -Wl,-z,relro -Wl,-z,now -o lib/libcodcif.so.3.10.0 obj/cif.o obj/cif2_lexer.o obj/cif_compiler.o obj/cif_grammar_flex.o obj/cif_lex_buffer.o obj/cif_lexer.o obj/cif_options.o obj/ciflist.o obj/cifmessage.o obj/ciftable.o obj/cifvalue.o obj/common.o obj/datablock.o obj/cif2_grammar.tab.o obj/cif_grammar.tab.o -lm sed 's/@VERSION@/3.10.0/' version.hin > version.h gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -Wl,-z,relro -Wl,-z,now -o cif_list_tags programs/cif_list_tags.c obj/cif2_grammar.tab.o obj/cif_grammar.tab.o lib/libcodcif.a ../../externals/cexceptions/lib/libcexceptions.a ../../externals/getoptions/lib/libgetoptions.a version.h -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -Wl,-z,relro -Wl,-z,now -o cifparse programs/cifparse.c obj/cif2_grammar.tab.o obj/cif_grammar.tab.o lib/libcodcif.a ../../externals/cexceptions/lib/libcexceptions.a ../../externals/getoptions/lib/libgetoptions.a version.h -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wsign-compare -g -O3 -funroll-loops -fomit-frame-pointer -foptimize-register-move -DYYDEBUG=1 -D_YACC_ -I. -I../../externals/cexceptions -I../../externals/getoptions -fPIC -DSVN_VERSION="\"10068\"" -Wl,-z,relro -Wl,-z,now -o cifvalues programs/cifvalues.c obj/cif2_grammar.tab.o obj/cif_grammar.tab.o lib/libcodcif.a ../../externals/cexceptions/lib/libcexceptions.a ../../externals/getoptions/lib/libgetoptions.a version.h -lm make[2]: Leaving directory '/<>/src/components/codcif' make -C /<>/src/lib/perl5/COD/Formulae/Parser/AdHoc/ make[2]: Entering directory '/<>/src/lib/perl5/COD/Formulae/Parser/AdHoc' yapp -v -m COD::Formulae::Parser::AdHoc -o - grammar.yp | sed 's/@VERSION@/3.10.0/' > lib/COD/Formulae/Parser/AdHoc.pm make[2]: Leaving directory '/<>/src/lib/perl5/COD/Formulae/Parser/AdHoc' cp /<>/src/lib/perl5/COD/Formulae/Parser/AdHoc//lib/COD/Formulae/Parser/AdHoc.pm /<>/src/lib/perl5/COD/Formulae/Parser/AdHoc.pm make -C /<>/src/lib/perl5/COD/Formulae/Parser/IUCr/ make[2]: Entering directory '/<>/src/lib/perl5/COD/Formulae/Parser/IUCr' yapp -v -m COD::Formulae::Parser::IUCr -o - grammar.yp | sed 's/@VERSION@/3.10.0/' > lib/COD/Formulae/Parser/IUCr.pm make[2]: Leaving directory '/<>/src/lib/perl5/COD/Formulae/Parser/IUCr' cp /<>/src/lib/perl5/COD/Formulae/Parser/IUCr//lib/COD/Formulae/Parser/IUCr.pm /<>/src/lib/perl5/COD/Formulae/Parser/IUCr.pm make -C /<>/src/lib/perl5/COD/CIF/Parser/Yapp/ make[2]: Entering directory '/<>/src/lib/perl5/COD/CIF/Parser/Yapp' yapp -v -m COD::CIF::Parser::Yapp -o - grammar.yp | sed 's/@VERSION@/3.10.0/' > lib/COD/CIF/Parser/Yapp.pm make[2]: Leaving directory '/<>/src/lib/perl5/COD/CIF/Parser/Yapp' cp /<>/src/lib/perl5/COD/CIF/Parser/Yapp//lib/COD/CIF/Parser/Yapp.pm /<>/src/lib/perl5/COD/CIF/Parser/Yapp.pm make -C /<>/src/lib/perl5/COD/CIF/Parser/Bison/ make[2]: Entering directory '/<>/src/lib/perl5/COD/CIF/Parser/Bison' swig -perl5 -Wall -outdir lib/COD/CIF/Parser/ source.i cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wno-unused-value -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -g -fPIC -I/usr/lib/x86_64-linux-gnu/perl/5.38/CORE -I. -I../../../../../../components/codcif -I../../../../../../externals/cexceptions -c source.c source_wrap.c cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -shared -L/usr/local/lib -fstack-protector-strong -Wl,-z,relro -Wl,-z,now source.o source_wrap.o ../../../../../../components/codcif/lib/libcodcif.a ../../../../../../externals/cexceptions/lib/libcexceptions.a -o lib/auto/COD/CIF/Parser/Bison/Bison.so make[2]: Leaving directory '/<>/src/lib/perl5/COD/CIF/Parser/Bison' cp /<>/src/lib/perl5/COD/CIF/Parser/Bison/lib/COD/CIF/Parser/Bison.pm /<>/src/lib/perl5/COD/CIF/Parser/Bison.pm cp /<>/src/lib/perl5/COD/CIF/Parser/Bison//lib/auto/COD/CIF/Parser/Bison/Bison.so /<>/src/lib/perl5/auto/COD/CIF/Parser/Bison/Bison.so make -C /<>/src/lib/perl5/COD/SPGLib/ make[2]: Entering directory '/<>/src/lib/perl5/COD/SPGLib' swig -perl5 -Wall -outdir lib/COD/ source.i cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -Wno-unused-value \ -I. -c \ `perl -MConfig -e 'print join(" ", @Config{qw(ccflags optimize cccdlflags)}, "-I$Config{archlib}/CORE")'` \ source.c source_wrap.c cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall `perl -MConfig -e 'print $Config{lddlflags}'` -Wl,-z,relro -Wl,-z,now source.o source_wrap.o -o lib/auto/COD/SPGLib/SPGLib.so -lsymspg make[2]: Leaving directory '/<>/src/lib/perl5/COD/SPGLib' cp /<>/src/lib/perl5/COD/SPGLib/lib/COD/SPGLib.pm /<>/src/lib/perl5/COD/SPGLib.pm cp /<>/src/lib/perl5/COD/SPGLib//lib/auto/COD/SPGLib/SPGLib.so /<>/src/lib/perl5/auto/COD/SPGLib/SPGLib.so make -C /<>/src/components/pycodcif all make[2]: Entering directory '/<>/src/components/pycodcif' sed 's/@@VERSION@@/'3.10.0'/' < setup.pyin > setup.py python3 setup.py build --build-lib build/python3/ && touch build/python3/pycodcif/pycodcif.py running build running build_py running build_ext building 'pycodcif._pycodcif' extension swigging pycodcif.i to pycodcif_wrap.c swig -python -o pycodcif_wrap.c pycodcif.i creating build creating build/temp.linux-x86_64-cpython-311 creating build/temp.linux-x86_64-cpython-311/src creating build/temp.linux-x86_64-cpython-311/src/components creating build/temp.linux-x86_64-cpython-311/src/components/codcif creating build/temp.linux-x86_64-cpython-311/src/externals creating build/temp.linux-x86_64-cpython-311/src/externals/cexceptions x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c pycodcif.c -o build/temp.linux-x86_64-cpython-311/pycodcif.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c pycodcif_wrap.c -o build/temp.linux-x86_64-cpython-311/pycodcif_wrap.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif2_grammar.tab.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif2_grammar.tab.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif2_lexer.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif2_lexer.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif_compiler.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_compiler.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif_grammar.tab.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_grammar.tab.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif_grammar_flex.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_grammar_flex.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif_lex_buffer.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_lex_buffer.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif_lexer.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_lexer.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif_options.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_options.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/ciflist.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/ciflist.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cifmessage.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cifmessage.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/ciftable.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/ciftable.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cifvalue.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cifvalue.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/common.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/common.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/datablock.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/datablock.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/externals/cexceptions/allocx.c -o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/allocx.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/externals/cexceptions/cexceptions.c -o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/cexceptions.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/externals/cexceptions/cxprintf.c -o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/cxprintf.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/externals/cexceptions/stdiox.c -o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/stdiox.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/externals/cexceptions/stringx.c -o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/stringx.o creating build/python3 creating build/python3/pycodcif x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/pycodcif.o build/temp.linux-x86_64-cpython-311/pycodcif_wrap.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif2_grammar.tab.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif2_lexer.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_compiler.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_grammar.tab.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_grammar_flex.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_lex_buffer.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_lexer.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_options.o build/temp.linux-x86_64-cpython-311/src/components/codcif/ciflist.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cifmessage.o build/temp.linux-x86_64-cpython-311/src/components/codcif/ciftable.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cifvalue.o build/temp.linux-x86_64-cpython-311/src/components/codcif/common.o build/temp.linux-x86_64-cpython-311/src/components/codcif/datablock.o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/allocx.o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/cexceptions.o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/cxprintf.o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/stdiox.o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/stringx.o -L/usr/lib/x86_64-linux-gnu -o build/python3/pycodcif/_pycodcif.cpython-311-x86_64-linux-gnu.so copying ./__init__.py -> build/python3/pycodcif copying ./pycodcif.py -> build/python3/pycodcif make[2]: Leaving directory '/<>/src/components/pycodcif' sed 's/@VERSION@/3.10.0/' src/lib/perl5/COD/ToolsVersion.pmin > src/lib/perl5/COD/ToolsVersion.pm make -C src make[2]: Entering directory '/<>/src' make[3]: Entering directory '/<>/src/externals' make[4]: Entering directory '/<>/src/externals/cexceptions' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/src/externals/cexceptions' make[4]: Entering directory '/<>/src/externals/getoptions' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/src/externals/getoptions' make[3]: Leaving directory '/<>/src/externals' make[3]: Entering directory '/<>/src/components' make[4]: Entering directory '/<>/src/components/codcif' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/src/components/codcif' make[4]: Entering directory '/<>/src/components/pycodcif' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/src/components/pycodcif' make[3]: Leaving directory '/<>/src/components' make[3]: Entering directory '/<>/src/lib' make[4]: Entering directory '/<>/src/lib/perl5' make[5]: Entering directory '/<>/src/lib/perl5/COD' make[6]: Entering directory '/<>/src/lib/perl5/COD/CIF' make[7]: Entering directory '/<>/src/lib/perl5/COD/CIF/Parser' make[8]: Entering directory '/<>/src/lib/perl5/COD/CIF/Parser/Bison' make[8]: Nothing to be done for 'all'. make[8]: Leaving directory '/<>/src/lib/perl5/COD/CIF/Parser/Bison' make[8]: Entering directory '/<>/src/lib/perl5/COD/CIF/Parser/Yapp' make[8]: Nothing to be done for 'all'. make[8]: Leaving directory '/<>/src/lib/perl5/COD/CIF/Parser/Yapp' make[7]: Leaving directory '/<>/src/lib/perl5/COD/CIF/Parser' make[6]: Leaving directory '/<>/src/lib/perl5/COD/CIF' make[6]: Entering directory '/<>/src/lib/perl5/COD/Formulae' make[7]: Entering directory '/<>/src/lib/perl5/COD/Formulae/Parser' make[8]: Entering directory '/<>/src/lib/perl5/COD/Formulae/Parser/AdHoc' make[8]: Nothing to be done for 'all'. make[8]: Leaving directory '/<>/src/lib/perl5/COD/Formulae/Parser/AdHoc' make[8]: Entering directory '/<>/src/lib/perl5/COD/Formulae/Parser/IUCr' make[8]: Nothing to be done for 'all'. make[8]: Leaving directory '/<>/src/lib/perl5/COD/Formulae/Parser/IUCr' make[7]: Leaving directory '/<>/src/lib/perl5/COD/Formulae/Parser' make[6]: Leaving directory '/<>/src/lib/perl5/COD/Formulae' make[6]: Entering directory '/<>/src/lib/perl5/COD/SPGLib' make[6]: Nothing to be done for 'all'. make[6]: Leaving directory '/<>/src/lib/perl5/COD/SPGLib' make[5]: Leaving directory '/<>/src/lib/perl5/COD' make[4]: Leaving directory '/<>/src/lib/perl5' make[3]: Leaving directory '/<>/src/lib' make[2]: Leaving directory '/<>/src' tools/help2man scripts/cif-to-utf8 --bugs-email cod-bugs@ibt.lt > doc/man/cif-to-utf8.1 tools/help2man scripts/cif2cod --bugs-email cod-bugs@ibt.lt > doc/man/cif2cod.1 tools/help2man scripts/cif2csv --bugs-email cod-bugs@ibt.lt > doc/man/cif2csv.1 tools/help2man scripts/cif2json --bugs-email cod-bugs@ibt.lt > doc/man/cif2json.1 tools/help2man scripts/cif2rdf --bugs-email cod-bugs@ibt.lt > doc/man/cif2rdf.1 tools/help2man scripts/cif2ref --bugs-email cod-bugs@ibt.lt > doc/man/cif2ref.1 tools/help2man scripts/cif2xyz --bugs-email cod-bugs@ibt.lt > doc/man/cif2xyz.1 tools/help2man scripts/cif_CODify --bugs-email cod-bugs@ibt.lt > doc/man/cif_CODify.1 tools/help2man scripts/cif_Fcalc --bugs-email cod-bugs@ibt.lt > doc/man/cif_Fcalc.1 tools/help2man scripts/cif_adjust_journal_name_volume --bugs-email cod-bugs@ibt.lt > doc/man/cif_adjust_journal_name_volume.1 tools/help2man scripts/cif_automorphism --bugs-email cod-bugs@ibt.lt > doc/man/cif_automorphism.1 tools/help2man scripts/cif_bounding_box --bugs-email cod-bugs@ibt.lt > doc/man/cif_bounding_box.1 tools/help2man scripts/cif_cell_contents --bugs-email cod-bugs@ibt.lt > doc/man/cif_cell_contents.1 tools/help2man scripts/cif_classify --bugs-email cod-bugs@ibt.lt > doc/man/cif_classify.1 tools/help2man scripts/cif_cod_check --bugs-email cod-bugs@ibt.lt > doc/man/cif_cod_check.1 tools/help2man scripts/cif_cod_deposit --bugs-email cod-bugs@ibt.lt > doc/man/cif_cod_deposit.1 tools/help2man scripts/cif_cod_numbers --bugs-email cod-bugs@ibt.lt > doc/man/cif_cod_numbers.1 tools/help2man scripts/cif_compare_dics --bugs-email cod-bugs@ibt.lt > doc/man/cif_compare_dics.1 tools/help2man scripts/cif_correct_tags --bugs-email cod-bugs@ibt.lt > doc/man/cif_correct_tags.1 tools/help2man scripts/cif_create_AMCSD_pressure_temp_tags --bugs-email cod-bugs@ibt.lt > doc/man/cif_create_AMCSD_pressure_temp_tags.1 tools/help2man scripts/cif_ddl1_dic_check --bugs-email cod-bugs@ibt.lt > doc/man/cif_ddl1_dic_check.1 tools/help2man scripts/cif_ddlm_dic_check --bugs-email cod-bugs@ibt.lt > doc/man/cif_ddlm_dic_check.1 tools/help2man scripts/cif_ddlm_dic_print --bugs-email cod-bugs@ibt.lt > doc/man/cif_ddlm_dic_print.1 tools/help2man scripts/cif_dictionary_tags --bugs-email cod-bugs@ibt.lt > doc/man/cif_dictionary_tags.1 tools/help2man scripts/cif_diff --bugs-email cod-bugs@ibt.lt > doc/man/cif_diff.1 tools/help2man scripts/cif_distances --bugs-email cod-bugs@ibt.lt > doc/man/cif_distances.1 tools/help2man scripts/cif_estimate_Z --bugs-email cod-bugs@ibt.lt > doc/man/cif_estimate_Z.1 tools/help2man scripts/cif_eval_numbers --bugs-email cod-bugs@ibt.lt > doc/man/cif_eval_numbers.1 tools/help2man scripts/cif_fillcell --bugs-email cod-bugs@ibt.lt > doc/man/cif_fillcell.1 tools/help2man scripts/cif_filter --bugs-email cod-bugs@ibt.lt > doc/man/cif_filter.1 tools/help2man scripts/cif_find_duplicates --bugs-email cod-bugs@ibt.lt > doc/man/cif_find_duplicates.1 tools/help2man scripts/cif_find_symmetry --bugs-email cod-bugs@ibt.lt > doc/man/cif_find_symmetry.1 tools/help2man scripts/cif_fix_values --bugs-email cod-bugs@ibt.lt > doc/man/cif_fix_values.1 tools/help2man scripts/cif_guess_AMCSD_atom_types --bugs-email cod-bugs@ibt.lt > doc/man/cif_guess_AMCSD_atom_types.1 tools/help2man scripts/cif_hkl_COD_number --bugs-email cod-bugs@ibt.lt > doc/man/cif_hkl_COD_number.1 tools/help2man scripts/cif_hkl_check --bugs-email cod-bugs@ibt.lt > doc/man/cif_hkl_check.1 tools/help2man scripts/cif_mark_disorder --bugs-email cod-bugs@ibt.lt > doc/man/cif_mark_disorder.1 tools/help2man scripts/cif_merge --bugs-email cod-bugs@ibt.lt > doc/man/cif_merge.1 tools/help2man scripts/cif_molecule --bugs-email cod-bugs@ibt.lt > doc/man/cif_molecule.1 tools/help2man scripts/cif_mpod_v1_to_v2 --bugs-email cod-bugs@ibt.lt > doc/man/cif_mpod_v1_to_v2.1 tools/help2man scripts/cif_mpod_v1_to_v3 --bugs-email cod-bugs@ibt.lt > doc/man/cif_mpod_v1_to_v3.1 tools/help2man scripts/cif_mpod_v2_to_v1 --bugs-email cod-bugs@ibt.lt > doc/man/cif_mpod_v2_to_v1.1 tools/help2man scripts/cif_mpod_v3_to_v1 --bugs-email cod-bugs@ibt.lt > doc/man/cif_mpod_v3_to_v1.1 tools/help2man scripts/cif_overlay --bugs-email cod-bugs@ibt.lt > doc/man/cif_overlay.1 tools/help2man scripts/cif_p1 --bugs-email cod-bugs@ibt.lt > doc/man/cif_p1.1 tools/help2man scripts/cif_parse --bugs-email cod-bugs@ibt.lt > doc/man/cif_parse.1 tools/help2man scripts/cif_reduce_Niggli --bugs-email cod-bugs@ibt.lt > doc/man/cif_reduce_Niggli.1 tools/help2man scripts/cif_reduce_cell --bugs-email cod-bugs@ibt.lt > doc/man/cif_reduce_cell.1 tools/help2man scripts/cif_reformat_AMCSD_author_names --bugs-email cod-bugs@ibt.lt > doc/man/cif_reformat_AMCSD_author_names.1 tools/help2man scripts/cif_reformat_pubmed_author_names --bugs-email cod-bugs@ibt.lt > doc/man/cif_reformat_pubmed_author_names.1 tools/help2man scripts/cif_reformat_uppercase_author_names --bugs-email cod-bugs@ibt.lt > doc/man/cif_reformat_uppercase_author_names.1 tools/help2man scripts/cif_select --bugs-email cod-bugs@ibt.lt > doc/man/cif_select.1 tools/help2man scripts/cif_set_value --bugs-email cod-bugs@ibt.lt > doc/man/cif_set_value.1 tools/help2man scripts/cif_sort_atoms --bugs-email cod-bugs@ibt.lt > doc/man/cif_sort_atoms.1 tools/help2man scripts/cif_split --bugs-email cod-bugs@ibt.lt > doc/man/cif_split.1 tools/help2man scripts/cif_split_primitive --bugs-email cod-bugs@ibt.lt > doc/man/cif_split_primitive.1 tools/help2man scripts/cif_symop_apply --bugs-email cod-bugs@ibt.lt > doc/man/cif_symop_apply.1 tools/help2man scripts/cif_tags_in_list --bugs-email cod-bugs@ibt.lt > doc/man/cif_tags_in_list.1 tools/help2man scripts/cif_tcod_tree --bugs-email cod-bugs@ibt.lt > doc/man/cif_tcod_tree.1 tools/help2man scripts/cif_validate --bugs-email cod-bugs@ibt.lt > doc/man/cif_validate.1 tools/help2man scripts/cif_values --bugs-email cod-bugs@ibt.lt > doc/man/cif_values.1 tools/help2man scripts/cod-tools-version --bugs-email cod-bugs@ibt.lt > doc/man/cod-tools-version.1 tools/help2man scripts/cod2rdf --bugs-email cod-bugs@ibt.lt > doc/man/cod2rdf.1 tools/help2man scripts/cod_fetch --bugs-email cod-bugs@ibt.lt > doc/man/cod_fetch.1 tools/help2man scripts/cod_manage_related --bugs-email cod-bugs@ibt.lt > doc/man/cod_manage_related.1 tools/help2man scripts/codcif2sdf --bugs-email cod-bugs@ibt.lt > doc/man/codcif2sdf.1 tools/help2man scripts/codxyz2fract --bugs-email cod-bugs@ibt.lt > doc/man/codxyz2fract.1 tools/help2man scripts/codxyz2ortho --bugs-email cod-bugs@ibt.lt > doc/man/codxyz2ortho.1 tools/help2man scripts/cosets --bugs-email cod-bugs@ibt.lt > doc/man/cosets.1 tools/help2man scripts/ddl1-to-ddlm --bugs-email cod-bugs@ibt.lt > doc/man/ddl1-to-ddlm.1 tools/help2man scripts/ddlm_validate --bugs-email cod-bugs@ibt.lt > doc/man/ddlm_validate.1 tools/help2man scripts/dic2markdown --bugs-email cod-bugs@ibt.lt > doc/man/dic2markdown.1 tools/help2man scripts/fetch_cif_dict --bugs-email cod-bugs@ibt.lt > doc/man/fetch_cif_dict.1 tools/help2man scripts/find_numbers --bugs-email cod-bugs@ibt.lt > doc/man/find_numbers.1 tools/help2man scripts/formula_sum --bugs-email cod-bugs@ibt.lt > doc/man/formula_sum.1 tools/help2man scripts/json2cif --bugs-email cod-bugs@ibt.lt > doc/man/json2cif.1 tools/help2man scripts/molcif2sdf --bugs-email cod-bugs@ibt.lt > doc/man/molcif2sdf.1 tools/help2man scripts/msg_parse --bugs-email cod-bugs@ibt.lt > doc/man/msg_parse.1 tools/help2man scripts/oqmd2cif --bugs-email cod-bugs@ibt.lt > doc/man/oqmd2cif.1 tools/help2man scripts/sdf_add_cod_data --bugs-email cod-bugs@ibt.lt > doc/man/sdf_add_cod_data.1 tools/help2man scripts/ssg3d --bugs-email cod-bugs@ibt.lt > doc/man/ssg3d.1 tools/help2man scripts/ssg_symop_canonical --bugs-email cod-bugs@ibt.lt > doc/man/ssg_symop_canonical.1 tools/help2man scripts/ssg_symop_check --bugs-email cod-bugs@ibt.lt > doc/man/ssg_symop_check.1 tools/help2man scripts/ssg_symop_matrices --bugs-email cod-bugs@ibt.lt > doc/man/ssg_symop_matrices.1 tools/help2man scripts/ssg_symop_string --bugs-email cod-bugs@ibt.lt > doc/man/ssg_symop_string.1 tools/help2man scripts/syminv --bugs-email cod-bugs@ibt.lt > doc/man/syminv.1 tools/help2man scripts/symmul --bugs-email cod-bugs@ibt.lt > doc/man/symmul.1 tools/help2man scripts/symop_build_spacegroup --bugs-email cod-bugs@ibt.lt > doc/man/symop_build_spacegroup.1 tools/help2man scripts/symops --bugs-email cod-bugs@ibt.lt > doc/man/symops.1 tools/help2man scripts/utf8-to-cif --bugs-email cod-bugs@ibt.lt > doc/man/utf8-to-cif.1 src/components/codcif/cif_list_tags --help | tools/help2man --stdin --name cif_list_tags --bugs-email cod-bugs@ibt.lt > doc/man/cif_list_tags.1 src/components/codcif/cifparse --help | tools/help2man --stdin --name cifparse --bugs-email cod-bugs@ibt.lt > doc/man/cifparse.1 src/components/codcif/cifvalues --help | tools/help2man --stdin --name cifvalues --bugs-email cod-bugs@ibt.lt > doc/man/cifvalues.1 make[1]: Leaving directory '/<>' dh_auto_test -O--no-parallel make -j1 test make[1]: Entering directory '/<>' tests/cases/cif-to-utf8_001.inp: OK tests/cases/cif-to-utf8_002.inp: OK tests/cases/cif-to-utf8_003.inp: OK tests/cases/cif-to-utf8_004.inp: OK tests/cases/cif-to-utf8_005.inp: OK tests/cases/cif-to-utf8_006.inp: OK tests/cases/cif-to-utf8_007.inp: OK tests/cases/cif-to-utf8_008.inp: OK tests/cases/cif-to-utf8_009.inp: OK tests/cases/cif-to-utf8_010.inp: OK tests/cases/cif-to-utf8_011.inp: OK tests/cases/cif-to-utf8_012.inp: OK tests/cases/cif2cod_001.inp: OK tests/cases/cif2cod_002.inp: OK tests/cases/cif2cod_003.inp: OK tests/cases/cif2cod_004.inp: OK tests/cases/cif2cod_005.inp: OK tests/cases/cif2cod_006.inp: OK tests/cases/cif2cod_007.inp: OK tests/cases/cif2cod_008.inp: OK tests/cases/cif2cod_009.inp: OK tests/cases/cif2cod_010.inp: OK tests/cases/cif2cod_011.inp: OK tests/cases/cif2cod_012.inp: OK tests/cases/cif2cod_013.inp: OK tests/cases/cif2cod_014.inp: OK tests/cases/cif2cod_015.inp: OK tests/cases/cif2cod_016.inp: OK tests/cases/cif2cod_017.inp: OK tests/cases/cif2cod_018.inp: OK tests/cases/cif2cod_019.inp: OK tests/cases/cif2cod_020.inp: OK tests/cases/cif2cod_021.inp: OK tests/cases/cif2cod_022.inp: OK tests/cases/cif2cod_023.inp: OK tests/cases/cif2cod_024.inp: OK tests/cases/cif2cod_025.inp: OK tests/cases/cif2cod_026.inp: OK tests/cases/cif2cod_027.inp: OK tests/cases/cif2cod_028.inp: OK tests/cases/cif2cod_029.inp: OK tests/cases/cif2cod_030.opt: OK tests/cases/cif2cod_031.inp: OK tests/cases/cif2cod_032.inp: OK tests/cases/cif2cod_033.inp: OK tests/cases/cif2cod_034.opt: OK tests/cases/cif2cod_035.opt: OK tests/cases/cif2cod_036.inp: OK tests/cases/cif2cod_037.inp: OK tests/cases/cif2cod_038.inp: OK tests/cases/cif2cod_039.inp: OK tests/cases/cif2cod_040.inp: OK tests/cases/cif2cod_041.inp: OK tests/cases/cif2cod_042.inp: OK tests/cases/cif2cod_043.inp: OK tests/cases/cif2cod_044.inp: OK tests/cases/cif2cod_045.inp: OK tests/cases/cif2cod_046.inp: OK tests/cases/cif2cod_047.opt: OK tests/cases/cif2cod_048.inp: OK tests/cases/cif2cod_049.inp: OK tests/cases/cif2cod_050.inp: OK tests/cases/cif2cod_051.inp: OK tests/cases/cif2cod_052.inp: OK tests/cases/cif2cod_053.inp: OK tests/cases/cif2cod_054.inp: OK tests/cases/cif2cod_055.inp: OK tests/cases/cif2cod_056.inp: OK tests/cases/cif2cod_057.inp: OK tests/cases/cif2cod_058.inp: OK tests/cases/cif2cod_059.inp: OK tests/cases/cif2cod_060.inp: OK tests/cases/cif2cod_061.inp: OK tests/cases/cif2cod_062.inp: OK tests/cases/cif2cod_063.inp: OK tests/cases/cif2cod_064.inp: OK tests/cases/cif2cod_065.inp: OK tests/cases/cif2cod_066.inp: OK tests/cases/cif2cod_067.inp: OK tests/cases/cif2cod_068.inp: OK tests/cases/cif2cod_069.inp: OK tests/cases/cif2cod_070.inp: OK tests/cases/cif2cod_071.inp: OK tests/cases/cif2cod_072.inp: OK tests/cases/cif2cod_073.inp: OK tests/cases/cif2cod_074.inp: OK tests/cases/cif2cod_075.inp: OK tests/cases/cif2cod_076.inp: OK tests/cases/cif2cod_077.inp: OK tests/cases/cif2csv_001.inp: OK tests/cases/cif2csv_002.inp: OK tests/cases/cif2json_001.inp: OK tests/cases/cif2json_002.inp: OK tests/cases/cif2rdf_001.inp: OK tests/cases/cif2rdf_002.inp: OK tests/cases/cif2rdf_003.inp: OK tests/cases/cif2rdf_004.inp: OK tests/cases/cif2rdf_005.opt: OK tests/cases/cif2rdf_006.inp: OK tests/cases/cif2rdf_007.opt: OK tests/cases/cif2rdf_008.opt: OK tests/cases/cif2rdf_009.opt: OK tests/cases/cif2rdf_010.opt: OK tests/cases/cif2rdf_011.inp: OK tests/cases/cif2rdf_012.inp: OK tests/cases/cif2rdf_013.inp: OK tests/cases/cif2rdf_014.inp: OK tests/cases/cif2rdf_015.inp: OK tests/cases/cif2ref_001.inp: OK tests/cases/cif2ref_002.inp: OK tests/cases/cif2ref_003.inp: OK tests/cases/cif2ref_004.inp: OK tests/cases/cif2ref_005.inp: OK tests/cases/cif2ref_006.inp: OK tests/cases/cif2ref_007.inp: OK tests/cases/cif2ref_008.inp: OK tests/cases/cif2ref_009.inp: OK tests/cases/cif2ref_010.inp: OK tests/cases/cif2ref_011.inp: OK tests/cases/cif2xyz_001.inp: OK tests/cases/cif2xyz_002.inp: OK tests/cases/cif2xyz_003.inp: OK tests/cases/cif2xyz_004.inp: OK tests/cases/cif2xyz_005.inp: OK tests/cases/cif2xyz_006.inp: OK tests/cases/cif2xyz_007.inp: OK tests/cases/cif2xyz_008.inp: OK tests/cases/cif2xyz_009.inp: OK tests/cases/cif2xyz_010.inp: OK tests/cases/cif2xyz_011.inp: OK tests/cases/cif2xyz_012.inp: OK tests/cases/cif2xyz_013.inp: OK tests/cases/cif2xyz_014.inp: OK tests/cases/cif_Fcalc_001.inp: OK tests/cases/cif_Fcalc_002.inp: OK tests/cases/cif_Fcalc_003.inp: OK tests/cases/cif_Fcalc_004.inp: OK tests/cases/cif_Fcalc_005.inp: OK tests/cases/cif_Fcalc_006.inp: OK tests/cases/cif_Fcalc_007.inp: OK tests/cases/cif_adjust_journal_name_volume_001.inp: OK tests/cases/cif_automorphism_001.inp: OK tests/cases/cif_automorphism_002.inp: OK tests/cases/cif_automorphism_003.inp: OK tests/cases/cif_automorphism_004.inp: OK tests/cases/cif_bounding_box_001.inp: OK tests/cases/cif_bounding_box_002.inp: OK tests/cases/cif_cell_contents_001.inp: OK tests/cases/cif_cell_contents_002.inp: OK tests/cases/cif_cell_contents_003.inp: OK tests/cases/cif_cell_contents_004.inp: OK tests/cases/cif_cell_contents_005.inp: OK tests/cases/cif_cell_contents_006.inp: OK tests/cases/cif_cell_contents_007.inp: OK tests/cases/cif_cell_contents_008.inp: OK tests/cases/cif_cell_contents_009.inp: OK tests/cases/cif_cell_contents_010.inp: OK tests/cases/cif_cell_contents_011.opt: OK tests/cases/cif_cell_contents_012.inp: OK tests/cases/cif_cell_contents_013.inp: OK tests/cases/cif_cell_contents_014.inp: OK tests/cases/cif_cell_contents_015.inp: OK tests/cases/cif_cell_contents_016.inp: OK tests/cases/cif_cell_contents_017.inp: OK tests/cases/cif_cell_contents_018.inp: OK tests/cases/cif_cell_contents_019.inp: OK tests/cases/cif_cell_contents_020.inp: OK tests/cases/cif_cell_contents_021.inp: OK tests/cases/cif_cell_contents_022.inp: OK tests/cases/cif_cell_contents_023.inp: OK tests/cases/cif_cell_contents_024.opt: OK tests/cases/cif_cell_contents_025.opt: OK tests/cases/cif_cell_contents_026.inp: OK tests/cases/cif_classify_001.inp: OK tests/cases/cif_classify_002.inp: OK tests/cases/cif_classify_003.inp: OK tests/cases/cif_classify_004.inp: OK tests/cases/cif_classify_005.inp: OK tests/cases/cif_classify_006.inp: OK tests/cases/cif_classify_007.inp: OK tests/cases/cif_classify_008.inp: OK tests/cases/cif_classify_009.inp: OK tests/cases/cif_cod_check_001.inp: OK tests/cases/cif_cod_check_002.inp: OK tests/cases/cif_cod_check_003.inp: OK tests/cases/cif_cod_check_004.inp: OK tests/cases/cif_cod_check_005.inp: OK tests/cases/cif_cod_check_006.inp: OK tests/cases/cif_cod_check_007.inp: OK tests/cases/cif_cod_check_008.inp: OK tests/cases/cif_cod_check_009.inp: OK tests/cases/cif_cod_check_010.inp: OK tests/cases/cif_cod_check_011.inp: OK tests/cases/cif_cod_check_012.inp: OK tests/cases/cif_cod_check_013.inp: OK tests/cases/cif_cod_check_014.inp: OK tests/cases/cif_cod_check_015.inp: OK tests/cases/cif_cod_check_016.inp: OK tests/cases/cif_cod_check_017.inp: OK tests/cases/cif_cod_check_018.inp: OK tests/cases/cif_cod_check_019.inp: OK tests/cases/cif_cod_check_020.inp: OK tests/cases/cif_cod_check_021.inp: OK tests/cases/cif_cod_check_022.inp: OK tests/cases/cif_cod_check_023.inp: OK tests/cases/cif_cod_check_024.inp: OK tests/cases/cif_cod_check_025.inp: OK tests/cases/cif_cod_check_026.inp: OK tests/cases/cif_cod_check_027.inp: OK tests/cases/cif_cod_check_028.inp: OK tests/cases/cif_cod_check_029.inp: OK tests/cases/cif_cod_check_030.inp: OK tests/cases/cif_cod_check_031.inp: OK tests/cases/cif_cod_check_032.inp: OK tests/cases/cif_cod_check_033.inp: OK tests/cases/cif_cod_check_034.inp: OK tests/cases/cif_cod_check_035.inp: OK tests/cases/cif_cod_check_036.inp: OK tests/cases/cif_cod_check_037.inp: OK tests/cases/cif_cod_check_038.inp: OK tests/cases/cif_cod_check_039.inp: OK tests/cases/cif_cod_check_040.inp: OK tests/cases/cif_cod_check_041.inp: OK tests/cases/cif_cod_check_042.inp: OK tests/cases/cif_cod_check_043.inp: OK tests/cases/cif_cod_check_044.inp: OK tests/cases/cif_cod_check_045.inp: OK tests/cases/cif_cod_check_046.inp: OK tests/cases/cif_cod_check_047.inp: OK tests/cases/cif_cod_check_048.inp: OK tests/cases/cif_cod_check_049.inp: OK tests/cases/cif_cod_check_050.inp: OK tests/cases/cif_cod_check_051.inp: OK tests/cases/cif_cod_check_052.inp: OK tests/cases/cif_cod_check_053.inp: OK tests/cases/cif_cod_check_054.inp: OK tests/cases/cif_cod_check_055.inp: OK tests/cases/cif_cod_check_056.inp: OK tests/cases/cif_cod_check_057.inp: OK tests/cases/cif_cod_check_058.inp: OK tests/cases/cif_cod_check_059.inp: OK tests/cases/cif_cod_check_060.inp: OK tests/cases/cif_cod_check_061.inp: OK tests/cases/cif_cod_check_062.inp: OK tests/cases/cif_cod_check_063.inp: OK tests/cases/cif_cod_check_064.inp: OK tests/cases/cif_cod_check_065.inp: OK tests/cases/cif_cod_check_066.inp: OK tests/cases/cif_cod_check_067.inp: OK tests/cases/cif_cod_check_068.inp: OK tests/cases/cif_cod_check_069.inp: OK tests/cases/cif_cod_check_070.inp: OK tests/cases/cif_cod_check_071.inp: OK tests/cases/cif_cod_check_072.inp: OK tests/cases/cif_cod_check_073.inp: OK tests/cases/cif_cod_check_074.inp: OK tests/cases/cif_cod_check_075.inp: OK tests/cases/cif_cod_check_076.inp: OK tests/cases/cif_cod_check_077.inp: OK tests/cases/cif_cod_check_078.inp: OK tests/cases/cif_cod_check_079.inp: OK tests/cases/cif_cod_check_080.inp: OK tests/cases/cif_cod_check_081.inp: OK tests/cases/cif_cod_check_082.inp: OK tests/cases/cif_cod_check_083.inp: OK tests/cases/cif_cod_check_084.inp: OK tests/cases/cif_cod_check_085.inp: OK tests/cases/cif_cod_check_086.inp: OK tests/cases/cif_cod_check_087.inp: OK tests/cases/cif_cod_check_088.inp: OK tests/cases/cif_cod_check_089.inp: OK tests/cases/cif_cod_check_090.inp: OK tests/cases/cif_cod_check_091.inp: OK tests/cases/cif_cod_check_092.inp: OK tests/cases/cif_cod_check_093.inp: OK tests/cases/cif_cod_check_094.inp: OK tests/cases/cif_cod_check_095.inp: OK tests/cases/cif_cod_check_096.inp: OK tests/cases/cif_cod_check_097.inp: OK tests/cases/cif_cod_check_098.inp: OK tests/cases/cif_cod_check_099.inp: OK tests/cases/cif_cod_check_100.inp: OK tests/cases/cif_cod_check_101.inp: OK tests/cases/cif_cod_check_102.inp: OK tests/cases/cif_cod_check_103.inp: OK tests/cases/cif_cod_check_104.inp: OK tests/cases/cif_cod_check_105.inp: OK tests/cases/cif_cod_check_106.inp: OK tests/cases/cif_cod_check_107.inp: OK tests/cases/cif_cod_check_108.inp: OK tests/cases/cif_cod_check_109.inp: OK tests/cases/cif_cod_check_110.inp: OK tests/cases/cif_cod_check_111.inp: OK tests/cases/cif_cod_check_112.inp: OK tests/cases/cif_cod_check_113.inp: OK tests/cases/cif_cod_check_114.inp: OK tests/cases/cif_cod_check_115.inp: OK tests/cases/cif_cod_check_116.inp: OK tests/cases/cif_cod_check_117.inp: OK tests/cases/cif_cod_check_118.inp: OK tests/cases/cif_cod_check_119.inp: OK tests/cases/cif_cod_check_120.inp: OK tests/cases/cif_cod_check_121.inp: OK tests/cases/cif_cod_check_122.inp: OK tests/cases/cif_cod_check_123.inp: OK tests/cases/cif_cod_check_124.inp: OK tests/cases/cif_cod_check_125.inp: OK tests/cases/cif_cod_check_126.inp: OK tests/cases/cif_cod_check_127.inp: OK tests/cases/cif_cod_check_128.inp: OK tests/cases/cif_cod_numbers_001.opt: Test skipped - not running tests requiring network access tests/cases/cif_cod_numbers_002.opt: Test skipped - not running tests requiring network access tests/cases/cif_cod_numbers_003.opt: Test skipped - not running tests requiring network access tests/cases/cif_cod_numbers_004.opt: Test skipped - not running tests requiring network access tests/cases/cif_cod_numbers_005.opt: Test skipped - not running tests requiring network access tests/cases/cif_cod_numbers_006.opt: Test skipped - not running tests requiring network access tests/cases/cif_cod_numbers_007.opt: Test skipped - not running tests requiring network access tests/cases/cif_cod_numbers_008.opt: OK tests/cases/cif_cod_numbers_009.inp: Test skipped - not running tests requiring network access tests/cases/cif_cod_numbers_010.inp: Test skipped - not running tests requiring network access tests/cases/cif_cod_numbers_011.inp: Test skipped - not running tests requiring network access tests/cases/cif_cod_numbers_012.inp: Test skipped - not running tests requiring network access tests/cases/cif_cod_numbers_013.inp: Test skipped - not running tests requiring network access tests/cases/cif_cod_numbers_014.inp: Test skipped - not running tests requiring network access tests/cases/cif_cod_numbers_015.opt: Test skipped - not running tests requiring network access tests/cases/cif_cod_numbers_016.inp: Test skipped - not running tests requiring network access tests/cases/cif_cod_numbers_017.opt: Test skipped - not running tests requiring network access tests/cases/cif_cod_numbers_018.inp: Test skipped - not running tests requiring network access tests/cases/cif_cod_numbers_019.inp: Test skipped - not running tests requiring network access tests/cases/cif_cod_numbers_020.opt: OK tests/cases/cif_cod_numbers_021.opt: OK tests/cases/cif_cod_numbers_022.inp: OK tests/cases/cif_cod_numbers_023.inp: OK tests/cases/cif_compare_dics_001.opt: OK tests/cases/cif_compare_dics_002.opt: OK tests/cases/cif_compare_dics_003.opt: OK tests/cases/cif_compare_dics_004.opt: OK tests/cases/cif_compare_dics_005.opt: OK tests/cases/cif_compare_dics_006.opt: OK tests/cases/cif_compare_dics_007.opt: OK tests/cases/cif_compare_dics_008.opt: OK tests/cases/cif_compare_dics_009.opt: OK tests/cases/cif_compare_dics_010.opt: OK tests/cases/cif_compare_dics_011.opt: OK tests/cases/cif_compare_dics_012.opt: OK tests/cases/cif_compare_dics_013.opt: OK tests/cases/cif_compare_dics_014.opt: OK tests/cases/cif_compare_dics_015.opt: OK tests/cases/cif_compare_dics_016.opt: OK tests/cases/cif_compare_dics_017.opt: OK tests/cases/cif_compare_dics_018.opt: OK tests/cases/cif_correct_tags_001.inp: OK tests/cases/cif_correct_tags_002.inp: OK tests/cases/cif_correct_tags_003.inp: OK tests/cases/cif_correct_tags_004.inp: OK tests/cases/cif_correct_tags_005.inp: OK tests/cases/cif_correct_tags_006.inp: OK tests/cases/cif_correct_tags_007.inp: OK tests/cases/cif_correct_tags_008.inp: OK tests/cases/cif_correct_tags_009.inp: OK tests/cases/cif_correct_tags_010.inp: OK tests/cases/cif_correct_tags_011.inp: OK tests/cases/cif_correct_tags_012.inp: OK tests/cases/cif_correct_tags_013.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_001.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_002.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_003.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_004.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_005.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_006.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_007.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_008.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_009.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_010.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_011.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_012.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_013.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_014.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_015.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_016.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_017.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_018.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_019.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_020.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_021.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_022.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_023.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_024.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_025.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_026.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_027.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_028.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_029.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_030.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_031.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_032.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_033.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_034.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_035.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_036.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_037.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_038.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_039.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_040.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_041.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_042.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_043.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_044.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_045.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_046.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_047.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_048.inp: OK tests/cases/cif_create_AMCSD_pressure_temp_tags_049.inp: OK tests/cases/cif_ddl1_dic_check_001.inp: OK tests/cases/cif_ddl1_dic_check_002.inp: OK tests/cases/cif_ddl1_dic_check_003.inp: OK tests/cases/cif_ddl1_dic_check_004.inp: OK tests/cases/cif_ddl1_dic_check_005.inp: OK tests/cases/cif_ddl1_dic_check_006.inp: OK tests/cases/cif_ddl1_dic_check_007.inp: OK tests/cases/cif_ddl1_dic_check_008.inp: OK tests/cases/cif_ddl1_dic_check_009.inp: OK tests/cases/cif_ddl1_dic_check_010.inp: OK tests/cases/cif_ddl1_dic_check_011.inp: OK tests/cases/cif_ddl1_dic_check_012.inp: OK tests/cases/cif_ddl1_dic_check_013.inp: OK tests/cases/cif_ddl1_dic_check_014.inp: OK tests/cases/cif_ddl1_dic_check_015.inp: OK tests/cases/cif_ddl1_dic_check_016.inp: OK tests/cases/cif_ddl1_dic_check_017.inp: OK tests/cases/cif_ddl1_dic_check_018.inp: OK tests/cases/cif_ddl1_dic_check_019.inp: OK tests/cases/cif_ddl1_dic_check_020.inp: OK tests/cases/cif_ddl1_dic_check_021.inp: OK tests/cases/cif_ddl1_dic_check_022.inp: OK tests/cases/cif_ddl1_dic_check_023.inp: OK tests/cases/cif_ddl1_dic_check_024.inp: OK tests/cases/cif_ddl1_dic_check_025.inp: OK tests/cases/cif_ddl1_dic_check_026.inp: OK tests/cases/cif_ddl1_dic_check_027.inp: OK tests/cases/cif_ddl1_dic_check_028.inp: OK tests/cases/cif_ddl1_dic_check_029.inp: OK tests/cases/cif_ddl1_dic_check_030.inp: OK tests/cases/cif_ddl1_dic_check_031.inp: OK tests/cases/cif_ddlm_dic_check_001.inp: OK tests/cases/cif_ddlm_dic_check_002.inp: OK tests/cases/cif_ddlm_dic_check_003.inp: OK tests/cases/cif_ddlm_dic_check_004.inp: OK tests/cases/cif_ddlm_dic_check_005.inp: OK tests/cases/cif_ddlm_dic_check_006.inp: OK tests/cases/cif_ddlm_dic_check_007.inp: OK tests/cases/cif_ddlm_dic_check_008.inp: OK tests/cases/cif_ddlm_dic_check_009.inp: OK tests/cases/cif_ddlm_dic_check_010.inp: OK tests/cases/cif_ddlm_dic_check_011.inp: OK tests/cases/cif_ddlm_dic_check_012.inp: OK tests/cases/cif_ddlm_dic_check_013.inp: OK tests/cases/cif_ddlm_dic_check_014.inp: OK tests/cases/cif_ddlm_dic_check_015.inp: OK tests/cases/cif_ddlm_dic_check_016.inp: OK tests/cases/cif_ddlm_dic_check_017.inp: OK tests/cases/cif_ddlm_dic_check_018.inp: OK tests/cases/cif_ddlm_dic_check_019.inp: OK tests/cases/cif_ddlm_dic_check_020.inp: OK tests/cases/cif_ddlm_dic_check_021.inp: OK tests/cases/cif_ddlm_dic_check_022.inp: OK tests/cases/cif_ddlm_dic_check_023.inp: OK tests/cases/cif_ddlm_dic_check_024.inp: OK tests/cases/cif_ddlm_dic_check_025.inp: OK tests/cases/cif_ddlm_dic_check_026.inp: OK tests/cases/cif_ddlm_dic_check_027.inp: OK tests/cases/cif_ddlm_dic_check_028.inp: OK tests/cases/cif_ddlm_dic_check_029.inp: OK tests/cases/cif_ddlm_dic_check_030.inp: OK tests/cases/cif_ddlm_dic_check_031.inp: OK tests/cases/cif_ddlm_dic_check_032.inp: OK tests/cases/cif_ddlm_dic_check_033.inp: OK tests/cases/cif_ddlm_dic_check_034.inp: OK tests/cases/cif_ddlm_dic_check_035.inp: OK tests/cases/cif_ddlm_dic_check_036.inp: OK tests/cases/cif_ddlm_dic_check_037.inp: OK tests/cases/cif_ddlm_dic_check_038.inp: OK tests/cases/cif_ddlm_dic_check_039.inp: OK tests/cases/cif_ddlm_dic_check_040.inp: OK tests/cases/cif_ddlm_dic_check_041.inp: OK tests/cases/cif_ddlm_dic_check_042.inp: OK tests/cases/cif_ddlm_dic_check_043.inp: OK tests/cases/cif_ddlm_dic_check_044.inp: OK tests/cases/cif_ddlm_dic_check_045.inp: OK tests/cases/cif_ddlm_dic_check_046.inp: OK tests/cases/cif_ddlm_dic_check_047.inp: OK tests/cases/cif_ddlm_dic_check_048.inp: OK tests/cases/cif_ddlm_dic_check_049.inp: OK tests/cases/cif_ddlm_dic_check_050.inp: OK tests/cases/cif_ddlm_dic_check_051.inp: OK tests/cases/cif_ddlm_dic_check_052.inp: OK tests/cases/cif_ddlm_dic_check_053.inp: OK tests/cases/cif_ddlm_dic_check_054.inp: OK tests/cases/cif_ddlm_dic_check_055.inp: OK tests/cases/cif_ddlm_dic_check_056.inp: OK tests/cases/cif_ddlm_dic_print_001.inp: OK tests/cases/cif_ddlm_dic_print_002.inp: OK tests/cases/cif_ddlm_dic_print_003.inp: OK tests/cases/cif_ddlm_dic_print_004.inp: OK tests/cases/cif_ddlm_dic_print_005.inp: OK tests/cases/cif_ddlm_dic_print_006.inp: OK tests/cases/cif_ddlm_dic_print_007.inp: OK tests/cases/cif_ddlm_dic_print_008.inp: OK tests/cases/cif_ddlm_dic_print_009.inp: OK tests/cases/cif_ddlm_dic_print_010.inp: OK tests/cases/cif_ddlm_dic_print_011.inp: OK tests/cases/cif_ddlm_dic_print_012.inp: OK tests/cases/cif_ddlm_dic_print_013.inp: OK tests/cases/cif_ddlm_dic_print_014.inp: OK tests/cases/cif_ddlm_dic_print_015.inp: OK tests/cases/cif_ddlm_dic_print_016.inp: OK tests/cases/cif_ddlm_dic_print_017.inp: OK tests/cases/cif_ddlm_dic_print_018.inp: OK tests/cases/cif_ddlm_dic_print_019.inp: OK tests/cases/cif_ddlm_dic_print_020.inp: OK tests/cases/cif_ddlm_dic_print_021.inp: OK tests/cases/cif_ddlm_dic_print_022.inp: OK tests/cases/cif_ddlm_dic_print_023.inp: OK tests/cases/cif_ddlm_dic_print_024.inp: OK tests/cases/cif_ddlm_dic_print_025.inp: OK tests/cases/cif_ddlm_dic_print_026.inp: OK tests/cases/cif_dictionary_tags_001.inp: OK tests/cases/cif_dictionary_tags_002.inp: OK tests/cases/cif_dictionary_tags_003.inp: OK tests/cases/cif_diff_001.opt: OK tests/cases/cif_diff_002.opt: OK tests/cases/cif_diff_003.opt: OK tests/cases/cif_diff_004.opt: OK tests/cases/cif_diff_005.opt: OK tests/cases/cif_diff_006.opt: OK tests/cases/cif_diff_007.opt: OK tests/cases/cif_diff_008.opt: OK tests/cases/cif_diff_009.opt: OK tests/cases/cif_diff_010.opt: OK tests/cases/cif_diff_011.opt: OK tests/cases/cif_diff_012.opt: OK tests/cases/cif_distances_001.inp: OK tests/cases/cif_distances_002.inp: OK tests/cases/cif_distances_003.inp: OK tests/cases/cif_distances_004.inp: OK tests/cases/cif_distances_005.inp: OK tests/cases/cif_distances_006.inp: OK tests/cases/cif_distances_007.inp: OK tests/cases/cif_distances_008.inp: OK tests/cases/cif_distances_009.inp: OK tests/cases/cif_distances_010.inp: OK tests/cases/cif_distances_011.inp: OK tests/cases/cif_distances_012.inp: OK tests/cases/cif_distances_013.inp: OK tests/cases/cif_distances_014.inp: OK tests/cases/cif_distances_015.inp: OK tests/cases/cif_distances_016.inp: OK tests/cases/cif_distances_017.inp: OK tests/cases/cif_distances_018.inp: OK tests/cases/cif_distances_019.inp: OK tests/cases/cif_distances_020.inp: OK tests/cases/cif_distances_021.inp: OK tests/cases/cif_distances_022.inp: OK tests/cases/cif_distances_023.inp: OK tests/cases/cif_distances_024.inp: OK tests/cases/cif_distances_025.inp: OK tests/cases/cif_distances_026.inp: OK tests/cases/cif_distances_027.inp: OK tests/cases/cif_distances_028.inp: OK tests/cases/cif_distances_029.inp: OK tests/cases/cif_distances_030.inp: OK tests/cases/cif_distances_031.inp: OK tests/cases/cif_distances_032.inp: OK tests/cases/cif_distances_033.inp: OK tests/cases/cif_distances_034.inp: OK tests/cases/cif_distances_035.inp: OK tests/cases/cif_distances_036.inp: OK tests/cases/cif_distances_037.inp: OK tests/cases/cif_distances_038.inp: OK tests/cases/cif_distances_039.inp: OK tests/cases/cif_distances_040.inp: OK tests/cases/cif_distances_041.inp: OK tests/cases/cif_distances_042.inp: OK tests/cases/cif_distances_043.inp: OK tests/cases/cif_estimate_Z_001.inp: OK tests/cases/cif_estimate_Z_002.inp: OK tests/cases/cif_estimate_Z_003.inp: OK tests/cases/cif_estimate_Z_004.inp: OK tests/cases/cif_estimate_Z_005.inp: OK tests/cases/cif_estimate_Z_006.inp: OK tests/cases/cif_estimate_Z_007.inp: OK tests/cases/cif_estimate_Z_008.opt: OK tests/cases/cif_estimate_Z_009.opt: OK tests/cases/cif_estimate_Z_010.inp: OK tests/cases/cif_estimate_Z_011.inp: OK tests/cases/cif_estimate_Z_012.inp: OK tests/cases/cif_eval_numbers_001.inp: OK tests/cases/cif_eval_numbers_002.inp: OK tests/cases/cif_eval_numbers_003.inp: OK tests/cases/cif_eval_numbers_004.inp: OK tests/cases/cif_eval_numbers_005.inp: OK tests/cases/cif_eval_numbers_006.inp: OK tests/cases/cif_eval_numbers_007.inp: OK tests/cases/cif_fillcell_001.inp: OK tests/cases/cif_fillcell_002.inp: OK tests/cases/cif_fillcell_003.inp: OK tests/cases/cif_fillcell_004.inp: OK tests/cases/cif_fillcell_005.inp: OK tests/cases/cif_fillcell_006.inp: OK tests/cases/cif_fillcell_007.inp: OK tests/cases/cif_fillcell_008.inp: OK tests/cases/cif_fillcell_009.inp: OK tests/cases/cif_fillcell_010.inp: OK tests/cases/cif_fillcell_011.inp: OK tests/cases/cif_fillcell_012.inp: OK tests/cases/cif_fillcell_013.inp: OK tests/cases/cif_fillcell_014.inp: OK tests/cases/cif_filter_001.inp: OK tests/cases/cif_filter_002.inp: OK tests/cases/cif_filter_003.inp: OK tests/cases/cif_filter_004.inp: OK tests/cases/cif_filter_005.inp: OK tests/cases/cif_filter_006.inp: OK tests/cases/cif_filter_007.inp: OK tests/cases/cif_filter_008.inp: OK tests/cases/cif_filter_009.inp: OK tests/cases/cif_filter_010.inp: OK tests/cases/cif_filter_011.inp: OK tests/cases/cif_filter_012.inp: OK tests/cases/cif_filter_013.inp: OK tests/cases/cif_filter_014.inp: OK tests/cases/cif_filter_015.inp: OK tests/cases/cif_filter_016.inp: OK tests/cases/cif_filter_017.inp: OK tests/cases/cif_filter_018.inp: OK tests/cases/cif_filter_019.inp: OK tests/cases/cif_filter_020.inp: OK tests/cases/cif_filter_021.inp: OK tests/cases/cif_filter_022.inp: OK tests/cases/cif_filter_023.inp: OK tests/cases/cif_filter_024.inp: OK tests/cases/cif_filter_025.inp: OK tests/cases/cif_filter_026.inp: OK tests/cases/cif_filter_027.inp: OK tests/cases/cif_filter_028.inp: OK tests/cases/cif_filter_029.inp: OK tests/cases/cif_filter_030.inp: OK tests/cases/cif_filter_031.inp: OK tests/cases/cif_filter_032.inp: OK tests/cases/cif_filter_033.inp: OK tests/cases/cif_filter_034.inp: OK tests/cases/cif_filter_035.inp: OK tests/cases/cif_filter_036.inp: OK tests/cases/cif_filter_037.inp: OK tests/cases/cif_filter_038.inp: OK tests/cases/cif_filter_039.inp: OK tests/cases/cif_filter_040.inp: OK tests/cases/cif_filter_041.inp: OK tests/cases/cif_filter_042.inp: OK tests/cases/cif_filter_043.inp: OK tests/cases/cif_filter_044.inp: OK tests/cases/cif_filter_045.inp: OK tests/cases/cif_filter_046.inp: OK tests/cases/cif_filter_047.inp: OK tests/cases/cif_filter_048.inp: OK tests/cases/cif_filter_049.inp: OK tests/cases/cif_filter_050.inp: OK tests/cases/cif_filter_051.inp: OK tests/cases/cif_filter_052.inp: OK tests/cases/cif_filter_053.inp: OK tests/cases/cif_filter_054.inp: OK tests/cases/cif_filter_055.inp: OK tests/cases/cif_filter_056.inp: OK tests/cases/cif_filter_057.inp: OK tests/cases/cif_filter_058.inp: OK tests/cases/cif_filter_059.inp: OK tests/cases/cif_filter_060.inp: OK tests/cases/cif_filter_061.inp: OK tests/cases/cif_filter_062.inp: OK tests/cases/cif_filter_063.inp: OK tests/cases/cif_filter_064.inp: OK tests/cases/cif_filter_065.inp: OK tests/cases/cif_filter_066.inp: OK tests/cases/cif_filter_067.inp: OK tests/cases/cif_filter_068.inp: OK tests/cases/cif_filter_069.inp: OK tests/cases/cif_filter_070.inp: OK tests/cases/cif_filter_071.inp: OK tests/cases/cif_filter_072.inp: OK tests/cases/cif_filter_073.inp: OK tests/cases/cif_filter_074.inp: OK tests/cases/cif_filter_075.inp: OK tests/cases/cif_filter_076.inp: OK tests/cases/cif_filter_077.inp: OK tests/cases/cif_filter_078.inp: OK tests/cases/cif_filter_079.inp: OK tests/cases/cif_filter_080.inp: OK tests/cases/cif_filter_081.inp: OK tests/cases/cif_filter_082.inp: OK tests/cases/cif_filter_083.inp: OK tests/cases/cif_filter_084.inp: OK tests/cases/cif_filter_085.inp: OK tests/cases/cif_filter_086.inp: OK tests/cases/cif_filter_087.inp: OK tests/cases/cif_filter_088.inp: OK tests/cases/cif_filter_089.inp: OK tests/cases/cif_filter_090.inp: OK tests/cases/cif_filter_091.inp: OK tests/cases/cif_filter_092.inp: OK tests/cases/cif_filter_093.inp: OK tests/cases/cif_filter_094.opt: OK tests/cases/cif_filter_095.opt: OK tests/cases/cif_filter_096.inp: OK tests/cases/cif_filter_097.inp: OK tests/cases/cif_filter_098.inp: OK tests/cases/cif_filter_099.inp: OK tests/cases/cif_filter_100.inp: OK tests/cases/cif_filter_101.inp: OK tests/cases/cif_filter_102.inp: OK tests/cases/cif_filter_103.inp: OK tests/cases/cif_filter_104.inp: OK tests/cases/cif_filter_105.inp: OK tests/cases/cif_filter_106.inp: OK tests/cases/cif_filter_107.inp: OK tests/cases/cif_filter_108.inp: OK tests/cases/cif_filter_109.inp: OK tests/cases/cif_filter_110.inp: OK tests/cases/cif_filter_111.inp: OK tests/cases/cif_filter_112.inp: OK tests/cases/cif_filter_113.inp: OK tests/cases/cif_filter_114.inp: OK tests/cases/cif_filter_115.inp: OK tests/cases/cif_filter_116.inp: OK tests/cases/cif_filter_117.inp: OK tests/cases/cif_filter_118.inp: OK tests/cases/cif_filter_119.inp: OK tests/cases/cif_filter_120.inp: OK tests/cases/cif_filter_121.inp: OK tests/cases/cif_filter_122.inp: OK tests/cases/cif_filter_123.inp: OK tests/cases/cif_filter_124.inp: OK tests/cases/cif_filter_125.inp: OK tests/cases/cif_filter_126.inp: OK tests/cases/cif_filter_127.inp: OK tests/cases/cif_filter_128.inp: OK tests/cases/cif_filter_129.inp: OK tests/cases/cif_filter_130.inp: OK tests/cases/cif_filter_131.inp: OK tests/cases/cif_filter_132.inp: OK tests/cases/cif_filter_133.inp: OK tests/cases/cif_filter_134.inp: OK tests/cases/cif_filter_135.inp: OK tests/cases/cif_filter_136.inp: OK tests/cases/cif_filter_137.inp: OK tests/cases/cif_filter_138.inp: OK tests/cases/cif_filter_139.inp: OK tests/cases/cif_filter_140.inp: OK tests/cases/cif_filter_141.inp: OK tests/cases/cif_filter_142.inp: OK tests/cases/cif_filter_143.inp: OK tests/cases/cif_filter_144.inp: OK tests/cases/cif_filter_145.inp: OK tests/cases/cif_filter_146.inp: OK tests/cases/cif_filter_147.inp: OK tests/cases/cif_filter_148.inp: OK tests/cases/cif_filter_149.inp: OK tests/cases/cif_filter_150.inp: OK tests/cases/cif_filter_151.inp: OK tests/cases/cif_filter_152.inp: OK tests/cases/cif_filter_153.inp: OK tests/cases/cif_filter_154.inp: OK tests/cases/cif_filter_155.inp: OK tests/cases/cif_filter_156.inp: OK tests/cases/cif_filter_157.inp: OK tests/cases/cif_filter_158.inp: OK tests/cases/cif_filter_159.inp: OK tests/cases/cif_filter_160.inp: OK tests/cases/cif_filter_161.inp: OK tests/cases/cif_filter_162.inp: OK tests/cases/cif_filter_163.inp: OK tests/cases/cif_filter_164.inp: OK tests/cases/cif_filter_165.inp: OK tests/cases/cif_filter_166.inp: OK tests/cases/cif_filter_167.inp: OK tests/cases/cif_filter_168.inp: OK tests/cases/cif_filter_169.inp: OK tests/cases/cif_filter_170.inp: OK tests/cases/cif_filter_171.inp: OK tests/cases/cif_filter_172.inp: OK tests/cases/cif_filter_173.inp: OK tests/cases/cif_filter_174.inp: OK tests/cases/cif_filter_175.inp: OK tests/cases/cif_filter_176.inp: OK tests/cases/cif_filter_177.inp: OK tests/cases/cif_filter_178.inp: OK tests/cases/cif_filter_179.inp: OK tests/cases/cif_filter_180.inp: OK tests/cases/cif_filter_181.inp: OK tests/cases/cif_filter_182.inp: OK tests/cases/cif_filter_183.inp: OK tests/cases/cif_filter_184.inp: OK tests/cases/cif_filter_185.inp: OK tests/cases/cif_filter_186.inp: OK tests/cases/cif_filter_187.inp: OK tests/cases/cif_filter_188.inp: OK tests/cases/cif_filter_189.inp: OK tests/cases/cif_filter_190.inp: OK tests/cases/cif_filter_191.inp: OK tests/cases/cif_filter_192.inp: OK tests/cases/cif_filter_193.inp: OK tests/cases/cif_filter_194.inp: OK tests/cases/cif_filter_195.inp: OK tests/cases/cif_filter_196.inp: OK tests/cases/cif_filter_197.inp: OK tests/cases/cif_filter_198.inp: OK tests/cases/cif_filter_199.inp: OK tests/cases/cif_filter_200.inp: OK tests/cases/cif_filter_201.inp: OK tests/cases/cif_filter_202.inp: OK tests/cases/cif_filter_203.inp: OK tests/cases/cif_filter_204.inp: OK tests/cases/cif_find_duplicates_001.inp: OK tests/cases/cif_find_duplicates_002.opt: OK tests/cases/cif_find_duplicates_003.opt: OK tests/cases/cif_find_duplicates_004.opt: OK tests/cases/cif_find_duplicates_005.opt: OK tests/cases/cif_find_duplicates_006.opt: OK tests/cases/cif_find_duplicates_007.opt: OK tests/cases/cif_find_duplicates_008.opt: OK tests/cases/cif_find_duplicates_009.opt: OK tests/cases/cif_find_duplicates_010.opt: OK tests/cases/cif_find_duplicates_011.opt: OK tests/cases/cif_find_duplicates_012.opt: OK tests/cases/cif_find_duplicates_013.opt: OK tests/cases/cif_find_duplicates_014.opt: OK tests/cases/cif_find_duplicates_015.opt: OK tests/cases/cif_find_symmetry_001.inp: OK tests/cases/cif_find_symmetry_002.inp: OK tests/cases/cif_find_symmetry_003.inp: FAILED: 71c71 < Co CO1 0 0 1 1.0 Uiso 0.00684 1 --- > Co CO1 0 0 0 1.0 Uiso 0.00684 1 tests/cases/cif_find_symmetry_004.inp: OK tests/cases/cif_find_symmetry_005.inp: OK tests/cases/cif_find_symmetry_006.inp: OK tests/cases/cif_find_symmetry_007.inp: OK tests/cases/cif_find_symmetry_008.inp: OK tests/cases/cif_find_symmetry_009.inp: OK tests/cases/cif_find_symmetry_010.inp: OK tests/cases/cif_find_symmetry_011.inp: OK tests/cases/cif_find_symmetry_012.inp: OK tests/cases/cif_find_symmetry_013.inp: FAILED: 1d0 < scripts/cif_find_symmetry: tests/cases/cif_find_symmetry_013.inp data_1837564: WARNING, spacegroup symbol '-C 2b 2' is not recognised. 31,32c30,31 < _space_group_name_H-M_alt Cmme < _space_group_name_Hall '-C 2b 2' --- > _space_group_name_H-M_alt 'C m m a' > _space_group_name_Hall '-C 2a 2' 39c38 < H 9.09248499881e-07 0.749999090752 0.750069205684 1 --- > H 0.500000909248 0.249999090752 0.750069205684 1 tests/cases/cif_fix_values_001.inp: OK tests/cases/cif_fix_values_002.inp: OK tests/cases/cif_fix_values_003.inp: OK tests/cases/cif_fix_values_004.inp: OK tests/cases/cif_fix_values_005.inp: OK tests/cases/cif_fix_values_006.inp: OK tests/cases/cif_fix_values_007.inp: OK tests/cases/cif_fix_values_008.inp: OK tests/cases/cif_fix_values_009.inp: OK tests/cases/cif_fix_values_010.inp: OK tests/cases/cif_fix_values_011.inp: OK tests/cases/cif_fix_values_012.inp: OK tests/cases/cif_fix_values_013.inp: OK tests/cases/cif_fix_values_014.inp: OK tests/cases/cif_fix_values_015.inp: OK tests/cases/cif_fix_values_016.inp: OK tests/cases/cif_fix_values_017.inp: OK tests/cases/cif_fix_values_018.inp: OK tests/cases/cif_fix_values_019.inp: OK tests/cases/cif_fix_values_020.inp: OK tests/cases/cif_fix_values_021.inp: OK tests/cases/cif_fix_values_022.inp: OK tests/cases/cif_fix_values_023.inp: OK tests/cases/cif_fix_values_024.inp: OK tests/cases/cif_fix_values_025.inp: OK tests/cases/cif_fix_values_026.inp: OK tests/cases/cif_fix_values_027.inp: OK tests/cases/cif_fix_values_028.inp: OK tests/cases/cif_fix_values_029.inp: OK tests/cases/cif_fix_values_030.inp: OK tests/cases/cif_fix_values_031.inp: OK tests/cases/cif_fix_values_032.inp: OK tests/cases/cif_fix_values_033.inp: OK tests/cases/cif_fix_values_034.inp: OK tests/cases/cif_fix_values_035.inp: OK tests/cases/cif_fix_values_036.inp: OK tests/cases/cif_fix_values_037.inp: OK tests/cases/cif_fix_values_038.inp: OK tests/cases/cif_fix_values_039.inp: OK tests/cases/cif_fix_values_040.inp: OK tests/cases/cif_fix_values_041.inp: OK tests/cases/cif_fix_values_042.inp: OK tests/cases/cif_fix_values_043.inp: OK tests/cases/cif_fix_values_044.inp: OK tests/cases/cif_fix_values_045.inp: OK tests/cases/cif_fix_values_046.inp: OK tests/cases/cif_fix_values_047.inp: OK tests/cases/cif_fix_values_048.inp: OK tests/cases/cif_fix_values_049.inp: OK tests/cases/cif_fix_values_050.inp: OK tests/cases/cif_fix_values_051.inp: OK tests/cases/cif_fix_values_052.inp: OK tests/cases/cif_fix_values_053.inp: OK tests/cases/cif_fix_values_054.inp: OK tests/cases/cif_fix_values_055.inp: OK tests/cases/cif_fix_values_056.inp: OK tests/cases/cif_fix_values_057.inp: OK tests/cases/cif_fix_values_058.inp: OK tests/cases/cif_fix_values_059.inp: OK tests/cases/cif_fix_values_060.inp: OK tests/cases/cif_fix_values_061.inp: OK tests/cases/cif_fix_values_062.inp: OK tests/cases/cif_fix_values_063.inp: OK tests/cases/cif_fix_values_064.inp: OK tests/cases/cif_fix_values_065.inp: OK tests/cases/cif_fix_values_066.inp: OK tests/cases/cif_fix_values_067.inp: OK tests/cases/cif_fix_values_068.inp: OK tests/cases/cif_fix_values_069.inp: OK tests/cases/cif_fix_values_070.inp: OK tests/cases/cif_fix_values_071.inp: OK tests/cases/cif_fix_values_072.inp: OK tests/cases/cif_fix_values_073.inp: OK tests/cases/cif_fix_values_074.inp: OK tests/cases/cif_fix_values_075.inp: OK tests/cases/cif_fix_values_076.inp: OK tests/cases/cif_fix_values_077.inp: OK tests/cases/cif_fix_values_078.inp: OK tests/cases/cif_fix_values_079.inp: OK tests/cases/cif_fix_values_080.inp: OK tests/cases/cif_fix_values_081.inp: OK tests/cases/cif_fix_values_082.inp: OK tests/cases/cif_fix_values_083.inp: OK tests/cases/cif_fix_values_084.inp: OK tests/cases/cif_fix_values_085.inp: OK tests/cases/cif_fix_values_086.inp: OK tests/cases/cif_fix_values_087.inp: OK tests/cases/cif_fix_values_088.inp: OK tests/cases/cif_fix_values_089.inp: OK tests/cases/cif_fix_values_090.inp: OK tests/cases/cif_fix_values_091.inp: OK tests/cases/cif_fix_values_092.inp: OK tests/cases/cif_fix_values_093.inp: OK tests/cases/cif_fix_values_094.inp: OK tests/cases/cif_fix_values_095.inp: OK tests/cases/cif_fix_values_096.inp: OK tests/cases/cif_fix_values_097.inp: OK tests/cases/cif_fix_values_098.inp: OK tests/cases/cif_fix_values_099.inp: OK tests/cases/cif_fix_values_100.inp: OK tests/cases/cif_fix_values_101.inp: OK tests/cases/cif_fix_values_102.inp: OK tests/cases/cif_fix_values_103.inp: OK tests/cases/cif_fix_values_104.inp: OK tests/cases/cif_fix_values_105.inp: OK tests/cases/cif_fix_values_106.inp: OK tests/cases/cif_fix_values_107.inp: OK tests/cases/cif_fix_values_108.inp: OK tests/cases/cif_fix_values_109.inp: OK tests/cases/cif_fix_values_110.inp: OK tests/cases/cif_fix_values_111.inp: OK tests/cases/cif_fix_values_112.inp: OK tests/cases/cif_fix_values_113.inp: OK tests/cases/cif_fix_values_114.inp: OK tests/cases/cif_fix_values_115.inp: OK tests/cases/cif_fix_values_116.inp: OK tests/cases/cif_fix_values_117.opt: OK tests/cases/cif_fix_values_118.inp: OK tests/cases/cif_fix_values_119.inp: OK tests/cases/cif_guess_AMCSD_atom_types_001.inp: OK tests/cases/cif_guess_AMCSD_atom_types_002.inp: OK tests/cases/cif_guess_AMCSD_atom_types_003.inp: OK tests/cases/cif_guess_AMCSD_atom_types_004.inp: OK tests/cases/cif_guess_AMCSD_atom_types_005.inp: OK tests/cases/cif_guess_AMCSD_atom_types_006.inp: OK tests/cases/cif_guess_AMCSD_atom_types_007.inp: OK tests/cases/cif_guess_AMCSD_atom_types_008.inp: OK tests/cases/cif_guess_AMCSD_atom_types_009.inp: OK tests/cases/cif_guess_AMCSD_atom_types_010.inp: OK tests/cases/cif_guess_AMCSD_atom_types_011.inp: OK tests/cases/cif_guess_AMCSD_atom_types_012.inp: OK tests/cases/cif_guess_AMCSD_atom_types_013.inp: OK tests/cases/cif_guess_AMCSD_atom_types_014.inp: OK tests/cases/cif_guess_AMCSD_atom_types_015.inp: OK tests/cases/cif_guess_AMCSD_atom_types_016.inp: OK tests/cases/cif_hkl_COD_number_001.inp: OK tests/cases/cif_hkl_COD_number_002.inp: OK tests/cases/cif_hkl_COD_number_003.inp: OK tests/cases/cif_hkl_COD_number_004.inp: OK tests/cases/cif_hkl_check_001.opt: OK tests/cases/cif_hkl_check_002.opt: OK tests/cases/cif_hkl_check_003.opt: OK tests/cases/cif_hkl_check_004.opt: OK tests/cases/cif_hkl_check_005.opt: OK tests/cases/cif_hkl_check_006.opt: OK tests/cases/cif_hkl_check_007.opt: OK tests/cases/cif_hkl_check_008.opt: OK tests/cases/cif_hkl_check_009.opt: OK tests/cases/cif_hkl_check_010.opt: OK tests/cases/cif_hkl_check_011.opt: OK tests/cases/cif_hkl_check_012.opt: OK tests/cases/cif_hkl_check_013.opt: OK tests/cases/cif_hkl_check_014.opt: OK tests/cases/cif_hkl_check_015.opt: OK tests/cases/cif_hkl_check_016.opt: OK tests/cases/cif_hkl_check_017.opt: OK tests/cases/cif_mark_disorder_001.opt: OK tests/cases/cif_mark_disorder_002.inp: OK tests/cases/cif_mark_disorder_003.inp: OK tests/cases/cif_mark_disorder_004.inp: OK tests/cases/cif_mark_disorder_005.inp: OK tests/cases/cif_mark_disorder_006.inp: OK tests/cases/cif_mark_disorder_007.inp: OK tests/cases/cif_mark_disorder_008.inp: OK tests/cases/cif_mark_disorder_009.inp: OK tests/cases/cif_mark_disorder_010.inp: OK tests/cases/cif_mark_disorder_011.inp: OK tests/cases/cif_mark_disorder_012.inp: OK tests/cases/cif_mark_disorder_013.inp: OK tests/cases/cif_mark_disorder_014.inp: OK tests/cases/cif_mark_disorder_015.inp: OK tests/cases/cif_mark_disorder_016.inp: OK tests/cases/cif_mark_disorder_017.inp: OK tests/cases/cif_mark_disorder_018.inp: OK tests/cases/cif_mark_disorder_019.inp: OK tests/cases/cif_mark_disorder_020.inp: OK tests/cases/cif_mark_disorder_021.inp: OK tests/cases/cif_mark_disorder_022.inp: OK tests/cases/cif_mark_disorder_023.inp: OK tests/cases/cif_mark_disorder_024.inp: OK tests/cases/cif_mark_disorder_025.inp: OK tests/cases/cif_mark_disorder_026.inp: OK tests/cases/cif_mark_disorder_027.inp: OK tests/cases/cif_mark_disorder_028.inp: OK tests/cases/cif_mark_disorder_029.inp: OK tests/cases/cif_mark_disorder_030.inp: OK tests/cases/cif_merge_001.opt: OK tests/cases/cif_merge_002.opt: OK tests/cases/cif_merge_003.opt: OK tests/cases/cif_merge_004.opt: OK tests/cases/cif_merge_005.opt: OK tests/cases/cif_merge_006.opt: OK tests/cases/cif_merge_007.opt: OK tests/cases/cif_molecule_001.inp: OK tests/cases/cif_molecule_002.inp: OK tests/cases/cif_molecule_003.inp: OK tests/cases/cif_molecule_004.inp: OK tests/cases/cif_molecule_005.inp: OK tests/cases/cif_molecule_006.inp: OK tests/cases/cif_molecule_007.inp: OK tests/cases/cif_molecule_008.inp: OK tests/cases/cif_molecule_009.inp: OK tests/cases/cif_molecule_010.inp: OK tests/cases/cif_molecule_011.inp: OK tests/cases/cif_molecule_012.inp: OK tests/cases/cif_molecule_013.inp: OK tests/cases/cif_molecule_014.inp: OK tests/cases/cif_molecule_015.inp: OK tests/cases/cif_molecule_016.inp: OK tests/cases/cif_molecule_017.inp: OK tests/cases/cif_molecule_018.inp: OK tests/cases/cif_molecule_019.inp: OK tests/cases/cif_molecule_020.inp: OK tests/cases/cif_molecule_021.inp: OK tests/cases/cif_molecule_022.inp: OK tests/cases/cif_molecule_023.inp: OK tests/cases/cif_molecule_024.inp: OK tests/cases/cif_molecule_025.inp: OK tests/cases/cif_molecule_026.inp: OK tests/cases/cif_molecule_027.inp: OK tests/cases/cif_molecule_028.inp: OK tests/cases/cif_molecule_029.inp: OK tests/cases/cif_molecule_030.inp: OK tests/cases/cif_molecule_031.inp: OK tests/cases/cif_molecule_032.inp: OK tests/cases/cif_molecule_033.inp: OK tests/cases/cif_molecule_034.inp: OK tests/cases/cif_molecule_035.inp: OK tests/cases/cif_molecule_036.inp: OK tests/cases/cif_molecule_037.inp: OK tests/cases/cif_molecule_038.inp: OK tests/cases/cif_molecule_039.inp: OK tests/cases/cif_molecule_040.inp: OK tests/cases/cif_molecule_041.inp: OK tests/cases/cif_molecule_042.inp: OK tests/cases/cif_molecule_043.inp: OK tests/cases/cif_molecule_044.inp: OK tests/cases/cif_molecule_045.inp: OK tests/cases/cif_molecule_046.inp: OK tests/cases/cif_molecule_047.inp: OK tests/cases/cif_molecule_048.inp: OK tests/cases/cif_molecule_049.inp: OK tests/cases/cif_molecule_050.inp: OK tests/cases/cif_molecule_051.inp: OK tests/cases/cif_molecule_052.inp: OK tests/cases/cif_molecule_053.inp: OK tests/cases/cif_molecule_054.inp: OK tests/cases/cif_molecule_055.inp: OK tests/cases/cif_molecule_056.inp: OK tests/cases/cif_molecule_057.inp: OK tests/cases/cif_molecule_058.inp: OK tests/cases/cif_molecule_059.inp: OK tests/cases/cif_molecule_060.inp: OK tests/cases/cif_molecule_061.inp: OK tests/cases/cif_molecule_062.inp: OK tests/cases/cif_molecule_063.inp: OK tests/cases/cif_molecule_064.inp: OK tests/cases/cif_molecule_065.opt: OK tests/cases/cif_molecule_066.opt: OK tests/cases/cif_molecule_067.opt: OK tests/cases/cif_molecule_068.opt: OK tests/cases/cif_molecule_069.opt: OK tests/cases/cif_molecule_070.inp: OK tests/cases/cif_molecule_071.inp: OK tests/cases/cif_molecule_072.inp: OK tests/cases/cif_molecule_073.inp: OK tests/cases/cif_molecule_074.inp: OK tests/cases/cif_molecule_075.inp: OK tests/cases/cif_molecule_076.inp: OK tests/cases/cif_molecule_077.inp: OK tests/cases/cif_molecule_078.inp: OK tests/cases/cif_molecule_079.inp: OK tests/cases/cif_molecule_080.inp: OK tests/cases/cif_molecule_081.inp: OK tests/cases/cif_molecule_082.inp: OK tests/cases/cif_molecule_083.inp: OK tests/cases/cif_molecule_084.inp: OK tests/cases/cif_molecule_085.inp: OK tests/cases/cif_molecule_086.inp: OK tests/cases/cif_molecule_087.inp: OK tests/cases/cif_molecule_088.inp: OK tests/cases/cif_molecule_089.inp: OK tests/cases/cif_molecule_090.inp: OK tests/cases/cif_molecule_091.inp: OK tests/cases/cif_molecule_092.inp: OK tests/cases/cif_molecule_093.inp: OK tests/cases/cif_molecule_094.inp: OK tests/cases/cif_molecule_095.inp: OK tests/cases/cif_molecule_096.inp: OK tests/cases/cif_molecule_097.inp: OK tests/cases/cif_molecule_098.inp: OK tests/cases/cif_molecule_099.inp: OK tests/cases/cif_molecule_100.inp: OK tests/cases/cif_molecule_101.inp: OK tests/cases/cif_molecule_102.inp: OK tests/cases/cif_molecule_103.inp: OK tests/cases/cif_molecule_104.inp: OK tests/cases/cif_molecule_105.inp: OK tests/cases/cif_molecule_106.inp: OK tests/cases/cif_molecule_107.inp: OK tests/cases/cif_molecule_108.inp: OK tests/cases/cif_molecule_109.inp: OK tests/cases/cif_molecule_110.inp: OK tests/cases/cif_molecule_111.inp: OK tests/cases/cif_molecule_112.inp: OK tests/cases/cif_molecule_113.inp: OK tests/cases/cif_molecule_114.inp: OK tests/cases/cif_molecule_115.inp: OK tests/cases/cif_molecule_116.inp: OK tests/cases/cif_molecule_117.inp: OK tests/cases/cif_molecule_118.inp: OK tests/cases/cif_molecule_119.inp: OK tests/cases/cif_molecule_120.inp: OK tests/cases/cif_molecule_121.inp: OK tests/cases/cif_molecule_122.inp: OK tests/cases/cif_molecule_123.inp: OK tests/cases/cif_molecule_124.inp: OK tests/cases/cif_molecule_125.inp: OK tests/cases/cif_molecule_126.inp: OK tests/cases/cif_molecule_127.inp: OK tests/cases/cif_molecule_128.inp: OK tests/cases/cif_molecule_129.inp: OK tests/cases/cif_molecule_130.inp: OK tests/cases/cif_molecule_131.inp: OK tests/cases/cif_molecule_132.inp: OK tests/cases/cif_molecule_133.inp: OK tests/cases/cif_molecule_134.inp: OK tests/cases/cif_molecule_135.inp: OK tests/cases/cif_molecule_136.inp: OK tests/cases/cif_molecule_137.inp: OK tests/cases/cif_molecule_138.inp: OK tests/cases/cif_molecule_139.inp: OK tests/cases/cif_molecule_140.inp: OK tests/cases/cif_molecule_141.inp: OK tests/cases/cif_molecule_142.inp: OK tests/cases/cif_molecule_143.inp: OK tests/cases/cif_molecule_144.inp: OK tests/cases/cif_molecule_145.inp: OK tests/cases/cif_molecule_146.inp: OK tests/cases/cif_molecule_147.inp: OK tests/cases/cif_molecule_148.inp: OK tests/cases/cif_molecule_149.inp: OK tests/cases/cif_molecule_150.inp: OK tests/cases/cif_molecule_151.inp: OK tests/cases/cif_molecule_152.inp: OK tests/cases/cif_molecule_153.inp: OK tests/cases/cif_molecule_154.inp: OK tests/cases/cif_molecule_155.inp: OK tests/cases/cif_molecule_156.inp: OK tests/cases/cif_molecule_157.inp: OK tests/cases/cif_molecule_158.inp: OK tests/cases/cif_molecule_159.inp: OK tests/cases/cif_molecule_160.inp: OK tests/cases/cif_molecule_161.inp: OK tests/cases/cif_molecule_162.inp: OK tests/cases/cif_molecule_163.inp: OK tests/cases/cif_molecule_164.inp: OK tests/cases/cif_molecule_165.inp: OK tests/cases/cif_molecule_166.inp: OK tests/cases/cif_molecule_167.inp: OK tests/cases/cif_molecule_168.inp: OK tests/cases/cif_molecule_169.inp: OK tests/cases/cif_molecule_170.inp: OK tests/cases/cif_molecule_171.inp: OK tests/cases/cif_molecule_172.inp: OK tests/cases/cif_molecule_173.inp: OK tests/cases/cif_molecule_174.inp: OK tests/cases/cif_molecule_175.inp: OK tests/cases/cif_molecule_176.inp: OK tests/cases/cif_molecule_177.inp: OK tests/cases/cif_molecule_178.inp: OK tests/cases/cif_molecule_179.inp: OK tests/cases/cif_molecule_180.inp: OK tests/cases/cif_molecule_181.inp: OK tests/cases/cif_molecule_182.inp: OK tests/cases/cif_molecule_183.inp: OK tests/cases/cif_molecule_184.inp: OK tests/cases/cif_molecule_185.inp: OK tests/cases/cif_molecule_186.inp: OK tests/cases/cif_molecule_187.inp: OK tests/cases/cif_molecule_188.inp: OK tests/cases/cif_molecule_189.inp: OK tests/cases/cif_molecule_190.inp: OK tests/cases/cif_molecule_191.inp: OK tests/cases/cif_molecule_192.inp: OK tests/cases/cif_molecule_193.inp: OK tests/cases/cif_molecule_194.inp: OK tests/cases/cif_molecule_195.inp: OK tests/cases/cif_molecule_196.inp: OK tests/cases/cif_molecule_197.inp: OK tests/cases/cif_molecule_198.inp: OK tests/cases/cif_molecule_199.inp: OK tests/cases/cif_molecule_200.inp: OK tests/cases/cif_molecule_201.inp: OK tests/cases/cif_molecule_202.inp: OK tests/cases/cif_molecule_203.inp: OK tests/cases/cif_molecule_204.inp: OK tests/cases/cif_molecule_205.inp: OK tests/cases/cif_molecule_206.inp: OK tests/cases/cif_molecule_207.inp: OK tests/cases/cif_molecule_208.inp: OK tests/cases/cif_molecule_209.inp: OK tests/cases/cif_molecule_210.inp: OK tests/cases/cif_molecule_211.inp: OK tests/cases/cif_molecule_212.inp: OK tests/cases/cif_molecule_213.inp: OK tests/cases/cif_molecule_214.inp: OK tests/cases/cif_molecule_215.inp: OK tests/cases/cif_molecule_216.inp: OK tests/cases/cif_molecule_217.inp: OK tests/cases/cif_molecule_218.inp: OK tests/cases/cif_molecule_219.inp: OK tests/cases/cif_molecule_220.inp: OK tests/cases/cif_molecule_221.inp: OK tests/cases/cif_molecule_222.inp: OK tests/cases/cif_molecule_223.inp: OK tests/cases/cif_molecule_224.inp: OK tests/cases/cif_molecule_225.inp: OK tests/cases/cif_molecule_226.inp: OK tests/cases/cif_molecule_227.inp: OK tests/cases/cif_molecule_228.inp: OK tests/cases/cif_molecule_229.inp: OK tests/cases/cif_molecule_230.inp: OK tests/cases/cif_molecule_231.inp: OK tests/cases/cif_molecule_232.inp: OK tests/cases/cif_molecule_233.inp: OK tests/cases/cif_molecule_234.inp: OK tests/cases/cif_molecule_235.inp: OK tests/cases/cif_molecule_236.inp: OK tests/cases/cif_mpod_v1_to_v2_001.inp: OK tests/cases/cif_mpod_v1_to_v2_002.inp: OK tests/cases/cif_mpod_v1_to_v2_003.inp: OK tests/cases/cif_mpod_v1_to_v2_004.inp: OK tests/cases/cif_mpod_v1_to_v2_005.inp: OK tests/cases/cif_mpod_v1_to_v2_006.inp: OK tests/cases/cif_mpod_v1_to_v2_007.inp: OK tests/cases/cif_mpod_v1_to_v2_008.inp: OK tests/cases/cif_mpod_v1_to_v2_009.inp: OK tests/cases/cif_mpod_v1_to_v3_001.inp: OK tests/cases/cif_mpod_v1_to_v3_002.inp: OK tests/cases/cif_mpod_v1_to_v3_003.inp: OK tests/cases/cif_mpod_v1_to_v3_004.inp: OK tests/cases/cif_mpod_v1_to_v3_005.inp: OK tests/cases/cif_mpod_v1_to_v3_006.inp: OK tests/cases/cif_mpod_v1_to_v3_007.inp: OK tests/cases/cif_mpod_v1_to_v3_008.inp: OK tests/cases/cif_mpod_v1_to_v3_009.inp: OK tests/cases/cif_mpod_v1_to_v3_010.inp: OK tests/cases/cif_mpod_v1_to_v3_011.inp: OK tests/cases/cif_mpod_v2_to_v1_001.inp: OK tests/cases/cif_mpod_v3_to_v1_001.inp: OK tests/cases/cif_mpod_v3_to_v1_002.inp: OK tests/cases/cif_mpod_v3_to_v1_003.inp: OK tests/cases/cif_overlay_001.opt: OK tests/cases/cif_overlay_002.opt: OK tests/cases/cif_p1_001.inp: OK tests/cases/cif_p1_002.inp: OK tests/cases/cif_p1_003.inp: OK tests/cases/cif_p1_004.inp: OK tests/cases/cif_p1_005.inp: OK tests/cases/cif_p1_006.inp: OK tests/cases/cif_p1_007.inp: OK tests/cases/cif_p1_008.inp: OK tests/cases/cif_p1_009.inp: OK tests/cases/cif_parse_001.inp: OK tests/cases/cif_parse_002.inp: OK tests/cases/cif_parse_003.inp: OK tests/cases/cif_parse_004.inp: OK tests/cases/cif_parse_005.inp: OK tests/cases/cif_parse_006.inp: OK tests/cases/cif_parse_007.inp: OK tests/cases/cif_parse_008.inp: OK tests/cases/cif_parse_009.inp: OK tests/cases/cif_parse_010.inp: OK tests/cases/cif_parse_011.inp: OK tests/cases/cif_parse_012.inp: OK tests/cases/cif_parse_013.inp: OK tests/cases/cif_parse_014.inp: OK tests/cases/cif_parse_015.inp: OK tests/cases/cif_reduce_Niggli_001.inp: OK tests/cases/cif_reduce_Niggli_002.inp: OK tests/cases/cif_reduce_Niggli_003.inp: OK tests/cases/cif_reduce_Niggli_004.inp: OK tests/cases/cif_reduce_Niggli_005.inp: OK tests/cases/cif_reduce_Niggli_006.inp: OK tests/cases/cif_reduce_cell_001.inp: OK tests/cases/cif_reduce_cell_002.inp: OK tests/cases/cif_reduce_cell_003.inp: OK tests/cases/cif_reformat_AMCSD_author_names_001.inp: OK tests/cases/cif_reformat_AMCSD_author_names_002.inp: OK tests/cases/cif_reformat_AMCSD_author_names_003.opt: OK tests/cases/cif_reformat_AMCSD_author_names_004.inp: OK tests/cases/cif_reformat_AMCSD_author_names_005.inp: OK tests/cases/cif_reformat_AMCSD_author_names_006.inp: OK tests/cases/cif_reformat_AMCSD_author_names_007.inp: OK tests/cases/cif_reformat_AMCSD_author_names_008.inp: OK tests/cases/cif_reformat_pubmed_author_names_001.inp: OK tests/cases/cif_reformat_uppercase_author_names_001.inp: OK tests/cases/cif_reformat_uppercase_author_names_002.inp: OK tests/cases/cif_reformat_uppercase_author_names_003.inp: OK tests/cases/cif_reformat_uppercase_author_names_004.inp: OK tests/cases/cif_select_001.inp: OK tests/cases/cif_select_002.inp: OK tests/cases/cif_select_003.inp: OK tests/cases/cif_select_004.inp: OK tests/cases/cif_select_005.inp: OK tests/cases/cif_select_006.inp: OK tests/cases/cif_select_007.inp: OK tests/cases/cif_select_008.inp: OK tests/cases/cif_select_009.inp: OK tests/cases/cif_select_010.opt: OK tests/cases/cif_select_011.inp: OK tests/cases/cif_select_012.inp: OK tests/cases/cif_select_013.inp: OK tests/cases/cif_select_014.inp: OK tests/cases/cif_set_value_001.inp: OK tests/cases/cif_set_value_002.inp: OK tests/cases/cif_set_value_003.inp: OK tests/cases/cif_set_value_004.inp: OK tests/cases/cif_set_value_005.inp: OK tests/cases/cif_sort_atoms_001.inp: OK tests/cases/cif_sort_atoms_002.inp: OK tests/cases/cif_sort_atoms_003.inp: OK tests/cases/cif_sort_atoms_004.inp: OK tests/cases/cif_sort_atoms_005.inp: OK tests/cases/cif_sort_atoms_006.inp: OK tests/cases/cif_sort_atoms_007.inp: OK tests/cases/cif_sort_atoms_008.inp: OK tests/cases/cif_sort_atoms_009.inp: OK tests/cases/cif_sort_atoms_010.inp: OK tests/cases/cif_sort_atoms_011.inp: OK tests/cases/cif_sort_atoms_012.inp: OK tests/cases/cif_sort_atoms_013.inp: OK tests/cases/cif_sort_atoms_014.inp: OK tests/cases/cif_sort_atoms_015.inp: OK tests/cases/cif_sort_atoms_016.inp: OK tests/cases/cif_sort_atoms_017.inp: OK tests/cases/cif_sort_atoms_018.inp: OK tests/cases/cif_sort_atoms_019.inp: OK tests/cases/cif_split_001.inp: OK tests/cases/cif_split_002.inp: OK tests/cases/cif_split_003.inp: OK tests/cases/cif_split_004.inp: OK tests/cases/cif_split_005.inp: OK tests/cases/cif_symop_apply_001.inp: OK tests/cases/cif_tags_in_list_001.inp: OK tests/cases/cif_tags_in_list_002.inp: OK tests/cases/cif_tcod_tree_001.inp: OK tests/cases/cif_tcod_tree_002.inp: OK tests/cases/cif_tcod_tree_003.inp: OK tests/cases/cif_tcod_tree_004.inp: OK tests/cases/cif_validate_001.inp: OK tests/cases/cif_validate_002.inp: OK tests/cases/cif_validate_003.inp: OK tests/cases/cif_validate_004.inp: OK tests/cases/cif_validate_005.inp: OK tests/cases/cif_validate_006.inp: OK tests/cases/cif_validate_007.inp: OK tests/cases/cif_validate_008.inp: OK tests/cases/cif_validate_009.inp: OK tests/cases/cif_validate_010.inp: OK tests/cases/cif_validate_011.inp: OK tests/cases/cif_validate_012.inp: OK tests/cases/cif_validate_013.inp: OK tests/cases/cif_validate_014.inp: OK tests/cases/cif_validate_015.inp: OK tests/cases/cif_validate_016.inp: OK tests/cases/cif_validate_017.inp: OK tests/cases/cif_validate_018.inp: OK tests/cases/cif_validate_019.inp: OK tests/cases/cif_validate_020.inp: OK tests/cases/cif_validate_021.inp: OK tests/cases/cif_validate_022.inp: OK tests/cases/cif_validate_023.inp: OK tests/cases/cif_validate_024.opt: OK tests/cases/cif_validate_025.inp: OK tests/cases/cif_validate_026.inp: OK tests/cases/cif_validate_027.inp: OK tests/cases/cif_validate_028.inp: OK tests/cases/cif_validate_029.inp: OK tests/cases/cif_validate_030.inp: OK tests/cases/cif_validate_031.inp: OK tests/cases/cif_validate_032.inp: OK tests/cases/cif_validate_033.inp: OK tests/cases/cif_validate_034.inp: OK tests/cases/cif_validate_035.inp: OK tests/cases/cif_validate_036.inp: OK tests/cases/cif_validate_037.inp: OK tests/cases/cif_validate_038.inp: OK tests/cases/cif_validate_039.inp: OK tests/cases/cif_validate_040.inp: OK tests/cases/cif_validate_041.inp: OK tests/cases/cif_validate_042.inp: OK tests/cases/cif_validate_043.inp: OK tests/cases/cif_validate_044.inp: OK tests/cases/cif_validate_045.inp: OK tests/cases/cif_validate_046.inp: OK tests/cases/cif_validate_047.inp: OK tests/cases/cif_validate_048.inp: OK tests/cases/cif_validate_049.inp: OK tests/cases/cif_validate_050.inp: OK tests/cases/cif_validate_051.inp: OK tests/cases/cif_validate_052.inp: OK tests/cases/cif_validate_053.inp: OK tests/cases/cif_validate_054.inp: OK tests/cases/cif_validate_055.inp: OK tests/cases/cif_validate_056.inp: OK tests/cases/cif_validate_057.inp: OK tests/cases/cif_validate_058.inp: OK tests/cases/cif_validate_059.inp: OK tests/cases/cif_validate_060.inp: OK tests/cases/cif_validate_061.inp: OK tests/cases/cif_validate_062.inp: OK tests/cases/cif_validate_063.inp: OK tests/cases/cif_validate_064.inp: OK tests/cases/cif_validate_065.inp: OK tests/cases/cif_validate_066.inp: OK tests/cases/cif_values_001.inp: OK tests/cases/cif_values_002.inp: OK tests/cases/cif_values_003.inp: OK tests/cases/cif_values_004.inp: OK tests/cases/cif_values_005.inp: OK tests/cases/cif_values_006.inp: OK tests/cases/cif_values_007.inp: OK tests/cases/cif_values_008.opt: OK tests/cases/cif_values_009.opt: OK tests/cases/cif_values_010.opt: OK tests/cases/cif_values_011.opt: OK tests/cases/cif_values_012.opt: OK tests/cases/cif_values_013.opt: OK tests/cases/cif_values_014.opt: OK tests/cases/cif_values_015.inp: OK tests/cases/cif_values_016.inp: OK tests/cases/cif_values_017.inp: OK tests/cases/cif_values_018.inp: OK tests/cases/cif_values_019.inp: OK tests/cases/cif_values_020.inp: OK tests/cases/cif_values_021.inp: OK tests/cases/cif_values_022.inp: OK tests/cases/cif_values_023.inp: OK tests/cases/cif_values_024.inp: OK tests/cases/cif_values_025.inp: OK tests/cases/cif_values_026.inp: OK tests/cases/cod2rdf_001.opt: OK tests/cases/cod2rdf_002.opt: OK tests/cases/cod2rdf_003.opt: OK tests/cases/cod2rdf_004.opt: OK tests/cases/cod2rdf_005.opt: OK tests/cases/cod2rdf_006.opt: OK tests/cases/cod2rdf_007.opt: OK tests/cases/cod2rdf_008.opt: OK tests/cases/cod2rdf_009.opt: OK tests/cases/cod2rdf_010.opt: OK tests/cases/cod2rdf_011.opt: OK tests/cases/cod2rdf_012.opt: OK tests/cases/cod2rdf_013.opt: OK tests/cases/cod2rdf_014.opt: OK tests/cases/cod2rdf_015.opt: OK tests/cases/cod2rdf_016.opt: OK tests/cases/cod2rdf_017.opt: OK tests/cases/cod2rdf_018.opt: OK tests/cases/cod2rdf_019.opt: OK tests/cases/cod2rdf_020.opt: OK tests/cases/cod2rdf_021.opt: OK tests/cases/cod2rdf_022.opt: OK tests/cases/cod2rdf_023.opt: OK tests/cases/cod2rdf_024.opt: OK tests/cases/cod2rdf_025.opt: OK tests/cases/cod2rdf_026.opt: OK tests/cases/cod2rdf_027.opt: OK tests/cases/cod_manage_related_001.inp: OK tests/cases/cod_manage_related_002.inp: OK tests/cases/cod_manage_related_003.inp: OK tests/cases/cod_manage_related_004.inp: OK tests/cases/cod_manage_related_005.inp: OK tests/cases/cod_manage_related_006.inp: OK tests/cases/cod_manage_related_007.inp: OK tests/cases/cod_manage_related_008.inp: OK tests/cases/cod_manage_related_009.inp: OK tests/cases/cod_manage_related_010.inp: OK tests/cases/cod_manage_related_011.inp: OK tests/cases/cod_manage_related_012.inp: OK tests/cases/codxyz2fract_001.inp: OK tests/cases/codxyz2fract_002.inp: OK tests/cases/codxyz2fract_003.inp: OK tests/cases/codxyz2fract_005.inp: OK tests/cases/codxyz2fract_006.inp: OK tests/cases/codxyz2fract_007.inp: OK tests/cases/codxyz2fract_008.inp: OK tests/cases/codxyz2fract_009.inp: OK tests/cases/codxyz2fract_010.inp: OK tests/cases/codxyz2fract_011.inp: OK tests/cases/codxyz2fract_012.inp: OK tests/cases/codxyz2fract_013.inp: OK tests/cases/codxyz2fract_014.inp: OK tests/cases/codxyz2fract_015.inp: OK tests/cases/codxyz2fract_016.inp: OK tests/cases/codxyz2fract_017.inp: OK tests/cases/codxyz2ortho_001.inp: OK tests/cases/codxyz2ortho_002.inp: OK tests/cases/codxyz2ortho_003.inp: OK tests/cases/codxyz2ortho_004.inp: OK tests/cases/codxyz2ortho_005.inp: OK tests/cases/codxyz2ortho_006.inp: OK tests/cases/codxyz2ortho_007.inp: OK tests/cases/codxyz2ortho_008.inp: OK tests/cases/codxyz2ortho_009.inp: OK tests/cases/codxyz2ortho_010.inp: OK tests/cases/codxyz2ortho_011.inp: OK tests/cases/codxyz2ortho_012.inp: OK tests/cases/codxyz2ortho_013.inp: OK tests/cases/ddl1-to-ddlm_001.inp: OK tests/cases/ddl1-to-ddlm_002.inp: OK tests/cases/ddl1-to-ddlm_003.inp: OK tests/cases/ddl1-to-ddlm_004.inp: OK tests/cases/ddl1-to-ddlm_005.inp: OK tests/cases/ddl1-to-ddlm_006.inp: OK tests/cases/ddl1-to-ddlm_007.inp: OK tests/cases/ddl1-to-ddlm_008.inp: OK tests/cases/ddl1-to-ddlm_009.inp: OK tests/cases/ddl1-to-ddlm_010.inp: OK tests/cases/ddl1-to-ddlm_011.inp: OK tests/cases/ddlm_validate_001.inp: OK tests/cases/ddlm_validate_002.inp: OK tests/cases/ddlm_validate_003.inp: OK tests/cases/ddlm_validate_004.inp: OK tests/cases/ddlm_validate_005.inp: OK tests/cases/ddlm_validate_006.inp: OK tests/cases/ddlm_validate_007.inp: OK tests/cases/ddlm_validate_008.inp: OK tests/cases/ddlm_validate_009.inp: OK tests/cases/ddlm_validate_010.inp: OK tests/cases/ddlm_validate_011.inp: OK tests/cases/ddlm_validate_012.inp: OK tests/cases/ddlm_validate_013.inp: OK tests/cases/ddlm_validate_014.inp: OK tests/cases/ddlm_validate_015.inp: OK tests/cases/ddlm_validate_016.inp: OK tests/cases/ddlm_validate_017.inp: OK tests/cases/ddlm_validate_018.inp: OK tests/cases/ddlm_validate_019.inp: OK tests/cases/ddlm_validate_020.inp: OK tests/cases/ddlm_validate_021.inp: OK tests/cases/ddlm_validate_022.inp: OK tests/cases/ddlm_validate_023.inp: OK tests/cases/ddlm_validate_024.inp: OK tests/cases/ddlm_validate_025.inp: OK tests/cases/ddlm_validate_026.inp: OK tests/cases/ddlm_validate_027.inp: OK tests/cases/ddlm_validate_028.inp: OK tests/cases/ddlm_validate_029.inp: OK tests/cases/ddlm_validate_030.inp: OK tests/cases/ddlm_validate_031.inp: OK tests/cases/ddlm_validate_032.inp: OK tests/cases/ddlm_validate_033.inp: OK tests/cases/ddlm_validate_034.inp: OK tests/cases/ddlm_validate_035.inp: OK tests/cases/ddlm_validate_036.inp: OK tests/cases/ddlm_validate_037.inp: OK tests/cases/ddlm_validate_038.inp: OK tests/cases/ddlm_validate_039.inp: OK tests/cases/ddlm_validate_040.inp: OK tests/cases/ddlm_validate_041.inp: OK tests/cases/ddlm_validate_042.inp: OK tests/cases/ddlm_validate_043.inp: OK tests/cases/ddlm_validate_044.inp: OK tests/cases/ddlm_validate_045.inp: OK tests/cases/ddlm_validate_046.inp: OK tests/cases/ddlm_validate_047.inp: OK tests/cases/ddlm_validate_048.inp: OK tests/cases/ddlm_validate_049.inp: OK tests/cases/ddlm_validate_050.inp: OK tests/cases/ddlm_validate_051.inp: OK tests/cases/ddlm_validate_052.inp: OK tests/cases/ddlm_validate_053.inp: OK tests/cases/ddlm_validate_054.inp: OK tests/cases/ddlm_validate_055.inp: OK tests/cases/ddlm_validate_056.inp: OK tests/cases/ddlm_validate_057.inp: OK tests/cases/ddlm_validate_058.inp: OK tests/cases/ddlm_validate_059.inp: OK tests/cases/ddlm_validate_060.inp: OK tests/cases/ddlm_validate_061.inp: OK tests/cases/ddlm_validate_062.inp: OK tests/cases/ddlm_validate_063.inp: OK tests/cases/ddlm_validate_064.inp: OK tests/cases/ddlm_validate_065.inp: OK tests/cases/ddlm_validate_066.inp: OK tests/cases/ddlm_validate_067.inp: OK tests/cases/ddlm_validate_068.inp: OK tests/cases/ddlm_validate_069.inp: OK tests/cases/ddlm_validate_070.inp: OK tests/cases/ddlm_validate_071.inp: OK tests/cases/ddlm_validate_072.inp: OK tests/cases/ddlm_validate_073.inp: OK tests/cases/ddlm_validate_074.inp: OK tests/cases/ddlm_validate_075.inp: OK tests/cases/ddlm_validate_076.inp: OK tests/cases/ddlm_validate_077.inp: OK tests/cases/ddlm_validate_078.inp: OK tests/cases/ddlm_validate_079.inp: OK tests/cases/ddlm_validate_080.inp: OK tests/cases/ddlm_validate_081.inp: OK tests/cases/ddlm_validate_082.inp: OK tests/cases/ddlm_validate_083.inp: OK tests/cases/ddlm_validate_084.inp: OK tests/cases/ddlm_validate_085.inp: OK tests/cases/ddlm_validate_086.inp: OK tests/cases/ddlm_validate_087.inp: OK tests/cases/ddlm_validate_088.inp: OK tests/cases/ddlm_validate_089.inp: OK tests/cases/ddlm_validate_090.inp: OK tests/cases/ddlm_validate_091.inp: OK tests/cases/dic2markdown_001.inp: OK tests/cases/dic2markdown_002.inp: OK tests/cases/dic2markdown_003.inp: OK tests/cases/dic2markdown_004.inp: OK tests/cases/dic2markdown_005.inp: OK tests/cases/dic2markdown_006.inp: OK tests/cases/dic2markdown_007.inp: OK tests/cases/msg_parse_001.inp: OK tests/cases/msg_parse_002.inp: OK tests/cases/msg_parse_003.inp: OK tests/cases/msg_parse_004.inp: OK tests/cases/msg_parse_005.inp: OK tests/cases/msg_parse_006.inp: OK tests/cases/msg_parse_007.inp: OK tests/cases/msg_parse_008.inp: OK tests/cases/oqmd2cif_001.opt: OK tests/cases/oqmd2cif_002.opt: OK tests/cases/oqmd2cif_003.opt: OK tests/cases/sdf_add_cod_data_001.opt: OK tests/cases/sdf_add_cod_data_002.opt: OK tests/cases/sdf_add_cod_data_003.opt: OK tests/cases/sdf_add_cod_data_004.opt: OK tests/cases/sdf_add_cod_data_005.inp: OK tests/cases/sdf_add_cod_data_006.inp: OK tests/cases/sdf_add_cod_data_007.inp: OK tests/cases/sdf_add_cod_data_008.inp: OK tests/cases/sdf_add_cod_data_009.inp: OK tests/cases/sdf_add_cod_data_010.inp: OK tests/cases/sdf_add_cod_data_011.inp: OK tests/cases/sdf_add_cod_data_012.inp: OK tests/cases/sdf_add_cod_data_013.inp: OK tests/cases/sdf_add_cod_data_014.inp: OK tests/cases/sdf_add_cod_data_015.inp: OK tests/cases/sdf_add_cod_data_016.inp: OK tests/cases/sdf_add_cod_data_017.inp: OK tests/cases/sdf_add_cod_data_018.inp: OK tests/cases/sdf_add_cod_data_019.inp: OK tests/cases/sdf_add_cod_data_020.inp: OK tests/cases/sdf_add_cod_data_021.inp: OK tests/cases/sdf_add_cod_data_022.inp: OK tests/cases/sdf_add_cod_data_023.inp: OK tests/cases/sdf_add_cod_data_024.inp: OK tests/cases/sdf_add_cod_data_025.inp: OK tests/cases/sdf_add_cod_data_026.inp: OK tests/cases/sdf_add_cod_data_027.inp: OK tests/cases/sdf_add_cod_data_028.inp: OK tests/cases/sdf_add_cod_data_029.inp: OK tests/cases/sdf_add_cod_data_030.inp: OK tests/cases/ssg3d_001.inp: OK tests/cases/ssg3d_002.inp: OK tests/cases/ssg3d_003.inp: OK tests/cases/ssg3d_004.inp: OK tests/cases/ssg3d_005.inp: OK tests/cases/ssg3d_006.inp: OK tests/cases/ssg3d_007.inp: OK tests/cases/ssg3d_008.inp: OK tests/cases/ssg3d_009.inp: OK tests/cases/ssg_symop_canonical_001.inp: OK tests/cases/ssg_symop_canonical_002.inp: OK tests/cases/ssg_symop_canonical_003.inp: OK tests/cases/ssg_symop_canonical_004.inp: OK tests/cases/ssg_symop_check_001.inp: OK tests/cases/ssg_symop_check_002.inp: OK tests/cases/ssg_symop_check_003.inp: OK tests/cases/ssg_symop_check_004.inp: OK tests/cases/ssg_symop_check_005.inp: OK tests/cases/ssg_symop_matrices_001.inp: OK tests/cases/ssg_symop_matrices_002.inp: OK tests/cases/ssg_symop_matrices_003.inp: OK tests/cases/ssg_symop_string_001.inp: OK tests/cases/symop_build_spacegroup_001.inp: OK tests/cases/symop_build_spacegroup_002.inp: OK tests/cases/symop_build_spacegroup_003.inp: OK tests/cases/symop_build_spacegroup_004.inp: OK tests/cases/symop_build_spacegroup_005.inp: OK tests/cases/symop_build_spacegroup_006.inp: OK tests/cases/symop_build_spacegroup_007.inp: OK tests/cases/symop_build_spacegroup_008.inp: OK tests/cases/symop_build_spacegroup_009.inp: OK tests/cases/symop_build_spacegroup_010.inp: OK tests/cases/symop_build_spacegroup_011.inp: OK tests/cases/symop_build_spacegroup_012.inp: OK tests/cases/symop_build_spacegroup_013.inp: OK tests/cases/symop_build_spacegroup_014.inp: OK tests/cases/symop_build_spacegroup_015.inp: OK tests/cases/symop_build_spacegroup_016.inp: OK tests/cases/symop_build_spacegroup_017.inp: OK tests/cases/symop_build_spacegroup_018.inp: OK tests/cases/symop_build_spacegroup_019.inp: OK tests/cases/symop_build_spacegroup_020.inp: OK tests/cases/symop_build_spacegroup_021.inp: OK tests/cases/symop_build_spacegroup_022.inp: OK tests/cases/symop_build_spacegroup_023.inp: OK tests/cases/symop_build_spacegroup_024.inp: OK tests/cases/symop_build_spacegroup_025.inp: OK tests/cases/symop_build_spacegroup_026.inp: OK tests/cases/symop_build_spacegroup_027.inp: OK tests/cases/symop_build_spacegroup_028.inp: OK tests/cases/symop_build_spacegroup_029.inp: OK tests/cases/symop_build_spacegroup_030.inp: OK tests/cases/symop_build_spacegroup_031.inp: OK tests/cases/symop_build_spacegroup_032.inp: OK tests/cases/symop_build_spacegroup_033.inp: OK tests/cases/symop_build_spacegroup_034.inp: OK tests/cases/symop_build_spacegroup_035.inp: OK tests/cases/symops_001.opt: OK tests/cases/symops_002.opt: OK tests/cases/symops_003.opt: OK tests/cases/symops_004.opt: OK tests/cases/symops_005.opt: OK tests/cases/utf8-to-cif_001.inp: OK tests/cases/utf8-to-cif_002.inp: OK tests/cases/utf8-to-cif_003.inp: OK tests/cases/utf8-to-cif_004.inp: OK tests/cases/utf8-to-cif_005.inp: OK tests/cases/utf8-to-cif_006.inp: OK tests/cases/utf8-to-cif_007.inp: OK tests/cases/utf8-to-cif_008.inp: OK tests/cases/utf8-to-cif_009.inp: OK tests/cases/utf8-to-cif_010.inp: OK tests/cases/utf8-to-cif_011.inp: OK tests/cases/utf8-to-cif_012.inp: OK make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_testroot -O--no-parallel dh_prep -O--no-parallel debian/rules override_dh_auto_install make[1]: Entering directory '/<>' dh_auto_install -- PREFIX=/<>/debian/tmp/usr make -j1 install DESTDIR=/<>/cod-tools-3.10.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" PREFIX=/<>/cod-tools-3.10.0\+dfsg/debian/tmp/usr make[2]: Entering directory '/<>' make -C src make[3]: Entering directory '/<>/src' make[4]: Entering directory '/<>/src/externals' make[5]: Entering directory '/<>/src/externals/cexceptions' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/src/externals/cexceptions' make[5]: Entering directory '/<>/src/externals/getoptions' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/src/externals/getoptions' make[4]: Leaving directory '/<>/src/externals' make[4]: Entering directory '/<>/src/components' make[5]: Entering directory '/<>/src/components/codcif' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/src/components/codcif' make[5]: Entering directory '/<>/src/components/pycodcif' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/src/components/pycodcif' make[4]: Leaving directory '/<>/src/components' make[4]: Entering directory '/<>/src/lib' make[5]: Entering directory '/<>/src/lib/perl5' make[6]: Entering directory '/<>/src/lib/perl5/COD' make[7]: Entering directory '/<>/src/lib/perl5/COD/CIF' make[8]: Entering directory '/<>/src/lib/perl5/COD/CIF/Parser' make[9]: Entering directory '/<>/src/lib/perl5/COD/CIF/Parser/Bison' make[9]: Nothing to be done for 'all'. make[9]: Leaving directory '/<>/src/lib/perl5/COD/CIF/Parser/Bison' make[9]: Entering directory '/<>/src/lib/perl5/COD/CIF/Parser/Yapp' make[9]: Nothing to be done for 'all'. make[9]: Leaving directory '/<>/src/lib/perl5/COD/CIF/Parser/Yapp' make[8]: Leaving directory '/<>/src/lib/perl5/COD/CIF/Parser' make[7]: Leaving directory '/<>/src/lib/perl5/COD/CIF' make[7]: Entering directory '/<>/src/lib/perl5/COD/Formulae' make[8]: Entering directory '/<>/src/lib/perl5/COD/Formulae/Parser' make[9]: Entering directory '/<>/src/lib/perl5/COD/Formulae/Parser/AdHoc' make[9]: Nothing to be done for 'all'. make[9]: Leaving directory '/<>/src/lib/perl5/COD/Formulae/Parser/AdHoc' make[9]: Entering directory '/<>/src/lib/perl5/COD/Formulae/Parser/IUCr' make[9]: Nothing to be done for 'all'. make[9]: Leaving directory '/<>/src/lib/perl5/COD/Formulae/Parser/IUCr' make[8]: Leaving directory '/<>/src/lib/perl5/COD/Formulae/Parser' make[7]: Leaving directory '/<>/src/lib/perl5/COD/Formulae' make[7]: Entering directory '/<>/src/lib/perl5/COD/SPGLib' make[7]: Nothing to be done for 'all'. make[7]: Leaving directory '/<>/src/lib/perl5/COD/SPGLib' make[6]: Leaving directory '/<>/src/lib/perl5/COD' make[5]: Leaving directory '/<>/src/lib/perl5' make[4]: Leaving directory '/<>/src/lib' make[3]: Leaving directory '/<>/src' make install -C src PREFIX=/<>/debian/tmp/usr make[3]: Entering directory '/<>/src' make[4]: Entering directory '/<>/src/externals' make[5]: Entering directory '/<>/src/externals/cexceptions' mkdir -p /<>/debian/tmp/usr/include mkdir -p /<>/debian/tmp/usr/lib cp *.h /<>/debian/tmp/usr/include cp lib/libcexceptions.a lib/libcexceptions.so.0.01 /<>/debian/tmp/usr/lib ln -fs libcexceptions.so.0.01 /<>/debian/tmp/usr/lib/libcexceptions.so.0 ln -fs libcexceptions.so.0 /<>/debian/tmp/usr/lib/libcexceptions.so make[5]: Leaving directory '/<>/src/externals/cexceptions' make[5]: Entering directory '/<>/src/externals/getoptions' mkdir -p /<>/debian/tmp/usr/include mkdir -p /<>/debian/tmp/usr/lib cp *.h /<>/debian/tmp/usr/include cp lib/libgetoptions.a lib/libgetoptions.so.0.01 /<>/debian/tmp/usr/lib ln -fs libgetoptions.so.0.01 /<>/debian/tmp/usr/lib/libgetoptions.so.0 ln -fs libgetoptions.so.0 /<>/debian/tmp/usr/lib/libgetoptions.so make[5]: Leaving directory '/<>/src/externals/getoptions' make[4]: Leaving directory '/<>/src/externals' make[4]: Entering directory '/<>/src/components' make[5]: Entering directory '/<>/src/components/codcif' mkdir -p /<>/debian/tmp/usr/include mkdir -p /<>/debian/tmp/usr/lib mkdir -p /<>/debian/tmp/usr/bin cp *.h /<>/debian/tmp/usr/include cp lib/libcodcif.a lib/libcodcif.so.3.10.0 /<>/debian/tmp/usr/lib cp cif_list_tags cifparse cifvalues /<>/debian/tmp/usr/bin ln -fs libcodcif.so.3.10.0 /<>/debian/tmp/usr/lib/libcodcif.so.3 ln -fs libcodcif.so.3 /<>/debian/tmp/usr/lib/libcodcif.so make[5]: Leaving directory '/<>/src/components/codcif' make[5]: Entering directory '/<>/src/components/pycodcif' python3 setup.py install --root /<>/debian/tmp/usr running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running build_ext building 'pycodcif._pycodcif' extension swigging pycodcif.i to pycodcif_wrap.c swig -python -o pycodcif_wrap.c pycodcif.i x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c pycodcif.c -o build/temp.linux-x86_64-cpython-311/pycodcif.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c pycodcif_wrap.c -o build/temp.linux-x86_64-cpython-311/pycodcif_wrap.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif2_grammar.tab.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif2_grammar.tab.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif2_lexer.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif2_lexer.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif_compiler.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_compiler.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif_grammar.tab.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_grammar.tab.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif_grammar_flex.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_grammar_flex.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif_lex_buffer.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_lex_buffer.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif_lexer.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_lexer.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif_options.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_options.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/ciflist.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/ciflist.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cifmessage.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cifmessage.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/ciftable.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/ciftable.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cifvalue.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cifvalue.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/common.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/common.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/datablock.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/datablock.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/externals/cexceptions/allocx.c -o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/allocx.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/externals/cexceptions/cexceptions.c -o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/cexceptions.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/externals/cexceptions/cxprintf.c -o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/cxprintf.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/externals/cexceptions/stdiox.c -o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/stdiox.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/externals/cexceptions/stringx.c -o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/stringx.o creating build/lib.linux-x86_64-cpython-311 creating build/lib.linux-x86_64-cpython-311/pycodcif x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/pycodcif.o build/temp.linux-x86_64-cpython-311/pycodcif_wrap.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif2_grammar.tab.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif2_lexer.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_compiler.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_grammar.tab.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_grammar_flex.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_lex_buffer.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_lexer.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_options.o build/temp.linux-x86_64-cpython-311/src/components/codcif/ciflist.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cifmessage.o build/temp.linux-x86_64-cpython-311/src/components/codcif/ciftable.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cifvalue.o build/temp.linux-x86_64-cpython-311/src/components/codcif/common.o build/temp.linux-x86_64-cpython-311/src/components/codcif/datablock.o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/allocx.o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/cexceptions.o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/cxprintf.o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/stdiox.o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/stringx.o -L/usr/lib/x86_64-linux-gnu -o build/lib.linux-x86_64-cpython-311/pycodcif/_pycodcif.cpython-311-x86_64-linux-gnu.so copying ./__init__.py -> build/lib.linux-x86_64-cpython-311/pycodcif copying ./pycodcif.py -> build/lib.linux-x86_64-cpython-311/pycodcif running install_lib creating /<>/debian/tmp/usr/usr creating /<>/debian/tmp/usr/usr/local creating /<>/debian/tmp/usr/usr/local/lib creating /<>/debian/tmp/usr/usr/local/lib/python3.11 creating /<>/debian/tmp/usr/usr/local/lib/python3.11/dist-packages creating /<>/debian/tmp/usr/usr/local/lib/python3.11/dist-packages/pycodcif copying build/lib.linux-x86_64-cpython-311/pycodcif/__init__.py -> /<>/debian/tmp/usr/usr/local/lib/python3.11/dist-packages/pycodcif copying build/lib.linux-x86_64-cpython-311/pycodcif/pycodcif.py -> /<>/debian/tmp/usr/usr/local/lib/python3.11/dist-packages/pycodcif copying build/lib.linux-x86_64-cpython-311/pycodcif/_pycodcif.cpython-311-x86_64-linux-gnu.so -> /<>/debian/tmp/usr/usr/local/lib/python3.11/dist-packages/pycodcif byte-compiling /<>/debian/tmp/usr/usr/local/lib/python3.11/dist-packages/pycodcif/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/tmp/usr/usr/local/lib/python3.11/dist-packages/pycodcif/pycodcif.py to pycodcif.cpython-311.pyc running install_egg_info running egg_info creating pycodcif.egg-info writing pycodcif.egg-info/PKG-INFO writing dependency_links to pycodcif.egg-info/dependency_links.txt writing top-level names to pycodcif.egg-info/top_level.txt writing manifest file 'pycodcif.egg-info/SOURCES.txt' reading manifest file 'pycodcif.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pycodcif.egg-info/SOURCES.txt' Copying pycodcif.egg-info to /<>/debian/tmp/usr/usr/local/lib/python3.11/dist-packages/pycodcif-3.10.0.egg-info running install_scripts make[5]: Leaving directory '/<>/src/components/pycodcif' make[4]: Leaving directory '/<>/src/components' make[4]: Entering directory '/<>/src/lib' make[5]: Entering directory '/<>/src/lib/perl5' make[6]: Entering directory '/<>/src/lib/perl5/COD' make[7]: Entering directory '/<>/src/lib/perl5/COD/CIF' make[8]: Entering directory '/<>/src/lib/perl5/COD/CIF/Parser' make[9]: Entering directory '/<>/src/lib/perl5/COD/CIF/Parser/Bison' mkdir --parents /<>/debian/tmp/usr/lib/perl5/COD/CIF/Parser mkdir --parents /<>/debian/tmp/usr/lib/perl5/auto/COD/CIF/Parser/Bison install --mode 644 lib/COD/CIF/Parser/Bison.pm /<>/debian/tmp/usr/lib/perl5/COD/CIF/Parser install lib/auto/COD/CIF/Parser/Bison/Bison.so /<>/debian/tmp/usr/lib/perl5/auto/COD/CIF/Parser/Bison make[9]: Leaving directory '/<>/src/lib/perl5/COD/CIF/Parser/Bison' make[9]: Entering directory '/<>/src/lib/perl5/COD/CIF/Parser/Yapp' mkdir --parents /<>/debian/tmp/usr/lib/perl5/COD/CIF/Parser install --mode 644 lib/COD/CIF/Parser/Yapp.pm /<>/debian/tmp/usr/lib/perl5/COD/CIF/Parser make[9]: Leaving directory '/<>/src/lib/perl5/COD/CIF/Parser/Yapp' make[8]: Leaving directory '/<>/src/lib/perl5/COD/CIF/Parser' make[7]: Leaving directory '/<>/src/lib/perl5/COD/CIF' make[7]: Entering directory '/<>/src/lib/perl5/COD/Formulae' make[8]: Entering directory '/<>/src/lib/perl5/COD/Formulae/Parser' make[9]: Entering directory '/<>/src/lib/perl5/COD/Formulae/Parser/AdHoc' mkdir --parents /<>/debian/tmp/usr/lib/perl5/COD/Formulae/Parser install --mode 644 lib/COD/Formulae/Parser/AdHoc.pm /<>/debian/tmp/usr/lib/perl5/COD/Formulae/Parser make[9]: Leaving directory '/<>/src/lib/perl5/COD/Formulae/Parser/AdHoc' make[9]: Entering directory '/<>/src/lib/perl5/COD/Formulae/Parser/IUCr' mkdir --parents /<>/debian/tmp/usr/lib/perl5/COD/Formulae/Parser install --mode 644 lib/COD/Formulae/Parser/IUCr.pm /<>/debian/tmp/usr/lib/perl5/COD/Formulae/Parser make[9]: Leaving directory '/<>/src/lib/perl5/COD/Formulae/Parser/IUCr' make[8]: Leaving directory '/<>/src/lib/perl5/COD/Formulae/Parser' make[7]: Leaving directory '/<>/src/lib/perl5/COD/Formulae' make[7]: Entering directory '/<>/src/lib/perl5/COD/SPGLib' mkdir --parents /<>/debian/tmp/usr/lib/perl5/COD mkdir --parents /<>/debian/tmp/usr/lib/perl5/auto/COD/SPGLib install --mode 644 lib/COD/SPGLib.pm /<>/debian/tmp/usr/lib/perl5/COD install lib/auto/COD/SPGLib/SPGLib.so /<>/debian/tmp/usr/lib/perl5/auto/COD/SPGLib make[7]: Leaving directory '/<>/src/lib/perl5/COD/SPGLib' make[6]: Leaving directory '/<>/src/lib/perl5/COD' make[5]: Leaving directory '/<>/src/lib/perl5' make[4]: Leaving directory '/<>/src/lib' make[3]: Leaving directory '/<>/src' test -d /<>/debian/tmp/usr/bin || mkdir -p /<>/debian/tmp/usr/bin install scripts/cif-to-utf8 scripts/cif2cod scripts/cif2csv scripts/cif2json scripts/cif2rdf scripts/cif2ref scripts/cif2xyz scripts/cif_CODify scripts/cif_Fcalc scripts/cif_adjust_journal_name_volume scripts/cif_automorphism scripts/cif_bounding_box scripts/cif_cell_contents scripts/cif_classify scripts/cif_cod_check scripts/cif_cod_deposit scripts/cif_cod_numbers scripts/cif_compare_dics scripts/cif_correct_tags scripts/cif_create_AMCSD_pressure_temp_tags scripts/cif_ddl1_dic_check scripts/cif_ddlm_dic_check scripts/cif_ddlm_dic_print scripts/cif_dictionary_tags scripts/cif_diff scripts/cif_distances scripts/cif_estimate_Z scripts/cif_eval_numbers scripts/cif_fillcell scripts/cif_filter scripts/cif_find_duplicates scripts/cif_find_symmetry scripts/cif_fix_values scripts/cif_guess_AMCSD_atom_types scripts/cif_hkl_COD_number scripts/cif_hkl_check scripts/cif_mark_disorder scripts/cif_merge scripts/cif_molecule scripts/cif_mpod_v1_to_v2 scripts/cif_mpod_v1_to_v3 scripts/cif_mpod_v2_to_v1 scripts/cif_mpod_v3_to_v1 scripts/cif_overlay scripts/cif_p1 scripts/cif_parse scripts/cif_reduce_Niggli scripts/cif_reduce_cell scripts/cif_reformat_AMCSD_author_names scripts/cif_reformat_pubmed_author_names scripts/cif_reformat_uppercase_author_names scripts/cif_select scripts/cif_set_value scripts/cif_sort_atoms scripts/cif_split scripts/cif_split_primitive scripts/cif_symop_apply scripts/cif_tags_in_list scripts/cif_tcod_tree scripts/cif_validate scripts/cif_values scripts/cod-tools-version scripts/cod2rdf scripts/cod_fetch scripts/cod_manage_related scripts/codcif2sdf scripts/codxyz2fract scripts/codxyz2ortho scripts/cosets scripts/ddl1-to-ddlm scripts/ddlm_validate scripts/dic2markdown scripts/fetch_cif_dict scripts/find_numbers scripts/formula_sum scripts/json2cif scripts/molcif2sdf scripts/msg_parse scripts/oqmd2cif scripts/sdf_add_cod_data scripts/ssg3d scripts/ssg_symop_canonical scripts/ssg_symop_check scripts/ssg_symop_matrices scripts/ssg_symop_string scripts/syminv scripts/symmul scripts/symop_build_spacegroup scripts/symops scripts/utf8-to-cif /<>/debian/tmp/usr/bin for i in perl5/COD/Fractional.pm perl5/COD/SOptions.pm perl5/COD/UserMessage.pm perl5/COD/ErrorHandler.pm perl5/COD/DateTime.pm perl5/COD/Precision.pm perl5/COD/ToolsVersion.pm perl5/COD/Spacegroups/Lookup.pm perl5/COD/Spacegroups/Builder.pm perl5/COD/Spacegroups/Lookup/COD.pm perl5/COD/Spacegroups/Lookup/CCP4.pm perl5/COD/Spacegroups/Cosets.pm perl5/COD/Spacegroups/SimpleBuilder.pm perl5/COD/Spacegroups/Names.pm perl5/COD/Spacegroups/Symop/Parse.pm perl5/COD/Spacegroups/Symop/SSGParse.pm perl5/COD/Spacegroups/Symop/Algebra.pm perl5/COD/Formulae/Print.pm perl5/COD/Overlays/Theobald.pm perl5/COD/Overlays/Kearsley.pm perl5/COD/Overlays/Kabsch.pm perl5/COD/Serialise.pm perl5/COD/Escape.pm perl5/COD/AuthorNames.pm perl5/COD/Algebra/GaussJordan.pm perl5/COD/Algebra/JacobiEigenSimple.pm perl5/COD/Algebra/Vector.pm perl5/COD/Algebra/JacobiEigen.pm perl5/COD/Algebra/GaussJordanBigRat.pm perl5/COD/AtomNeighbours.pm perl5/COD/Cell.pm perl5/COD/Cell/Delaunay/Delaunay.pm perl5/COD/Cell/Conventional/deWG91.pm perl5/COD/Cell/Niggli/KG76.pm perl5/COD/CromerMann.pm perl5/COD/CIF/Unicode2CIF.pm perl5/COD/CIF/Data.pm perl5/COD/CIF/Data/Diff.pm perl5/COD/CIF/Data/Classifier.pm perl5/COD/CIF/Data/ExcludeFromStatistics.pm perl5/COD/CIF/Data/CODNumbers.pm perl5/COD/CIF/Data/SymmetryGenerator.pm perl5/COD/CIF/Data/CIF2COD.pm perl5/COD/CIF/Data/MarkDisorder.pm perl5/COD/CIF/Data/AtomList.pm perl5/COD/CIF/Data/EstimateZ.pm perl5/COD/CIF/Data/Check.pm perl5/COD/CIF/Data/CellContents.pm perl5/COD/CIF/Data/CODFlags.pm perl5/COD/CIF/DDL.pm perl5/COD/CIF/JSON.pm perl5/COD/CIF/Parser.pm perl5/COD/CIF/DDL/DDL1.pm perl5/COD/CIF/DDL/Validate.pm perl5/COD/CIF/DDL/DDLm/Import.pm perl5/COD/CIF/DDL/DDLm/Validate.pm perl5/COD/CIF/DDL/DDLm.pm perl5/COD/CIF/DDL/Ranges.pm perl5/COD/CIF/ChangeLog.pm perl5/COD/CIF/Tags/CanonicalNames.pm perl5/COD/CIF/Tags/COD.pm perl5/COD/CIF/Tags/TCOD.pm perl5/COD/CIF/Tags/Merge.pm perl5/COD/CIF/Tags/Excluded.pm perl5/COD/CIF/Tags/Print.pm perl5/COD/CIF/Tags/Manage.pm perl5/COD/CIF/Tags/AMCSD.pm perl5/COD/CIF/Tags/DFT.pm perl5/COD/CIF/Tags/DictTags.pm perl5/COD/AtomProperties.pm perl5/COD/Algebra.pm perl5/COD/SUsage.pm perl5/COD/MorganFingerprints.pm perl5/COD/AtomBricks.pm perl5/COD/SemVer.pm perl5/COD/XYZ.pm perl5/COD/RDF.pm; \ do \ test -d /<>/debian/tmp/usr/lib/$(dirname $i) \ || mkdir -p /<>/debian/tmp/usr/lib/$(dirname $i); \ install --mode 644 src/lib/$i /<>/debian/tmp/usr/lib/$i; \ done make[2]: Leaving directory '/<>' dh_auto_install -O--buildsystem=pybuild -- --dir src/components/pycodcif I: pybuild base:311: /usr/bin/python3.12 setup.py install --root /<>/debian/python3-pycodcif running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running build_ext building 'pycodcif._pycodcif' extension swigging pycodcif.i to pycodcif_wrap.c swig -python -o pycodcif_wrap.c pycodcif.i creating build/temp.linux-x86_64-cpython-312 creating build/temp.linux-x86_64-cpython-312/src creating build/temp.linux-x86_64-cpython-312/src/components creating build/temp.linux-x86_64-cpython-312/src/components/codcif creating build/temp.linux-x86_64-cpython-312/src/externals creating build/temp.linux-x86_64-cpython-312/src/externals/cexceptions x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c pycodcif.c -o build/temp.linux-x86_64-cpython-312/pycodcif.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c pycodcif_wrap.c -o build/temp.linux-x86_64-cpython-312/pycodcif_wrap.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/components/codcif/cif.c -o build/temp.linux-x86_64-cpython-312/src/components/codcif/cif.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/components/codcif/cif2_grammar.tab.c -o build/temp.linux-x86_64-cpython-312/src/components/codcif/cif2_grammar.tab.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/components/codcif/cif2_lexer.c -o build/temp.linux-x86_64-cpython-312/src/components/codcif/cif2_lexer.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/components/codcif/cif_compiler.c -o build/temp.linux-x86_64-cpython-312/src/components/codcif/cif_compiler.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/components/codcif/cif_grammar.tab.c -o build/temp.linux-x86_64-cpython-312/src/components/codcif/cif_grammar.tab.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/components/codcif/cif_grammar_flex.c -o build/temp.linux-x86_64-cpython-312/src/components/codcif/cif_grammar_flex.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/components/codcif/cif_lex_buffer.c -o build/temp.linux-x86_64-cpython-312/src/components/codcif/cif_lex_buffer.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/components/codcif/cif_lexer.c -o build/temp.linux-x86_64-cpython-312/src/components/codcif/cif_lexer.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/components/codcif/cif_options.c -o build/temp.linux-x86_64-cpython-312/src/components/codcif/cif_options.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/components/codcif/ciflist.c -o build/temp.linux-x86_64-cpython-312/src/components/codcif/ciflist.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/components/codcif/cifmessage.c -o build/temp.linux-x86_64-cpython-312/src/components/codcif/cifmessage.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/components/codcif/ciftable.c -o build/temp.linux-x86_64-cpython-312/src/components/codcif/ciftable.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/components/codcif/cifvalue.c -o build/temp.linux-x86_64-cpython-312/src/components/codcif/cifvalue.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/components/codcif/common.c -o build/temp.linux-x86_64-cpython-312/src/components/codcif/common.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/components/codcif/datablock.c -o build/temp.linux-x86_64-cpython-312/src/components/codcif/datablock.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/externals/cexceptions/allocx.c -o build/temp.linux-x86_64-cpython-312/src/externals/cexceptions/allocx.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/externals/cexceptions/cexceptions.c -o build/temp.linux-x86_64-cpython-312/src/externals/cexceptions/cexceptions.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/externals/cexceptions/cxprintf.c -o build/temp.linux-x86_64-cpython-312/src/externals/cexceptions/cxprintf.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/externals/cexceptions/stdiox.c -o build/temp.linux-x86_64-cpython-312/src/externals/cexceptions/stdiox.o x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.12 -c src/externals/cexceptions/stringx.c -o build/temp.linux-x86_64-cpython-312/src/externals/cexceptions/stringx.o creating /<>/.pybuild/cpython3_3.12_pycodcif/build/pycodcif x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-312/pycodcif.o build/temp.linux-x86_64-cpython-312/pycodcif_wrap.o build/temp.linux-x86_64-cpython-312/src/components/codcif/cif.o build/temp.linux-x86_64-cpython-312/src/components/codcif/cif2_grammar.tab.o build/temp.linux-x86_64-cpython-312/src/components/codcif/cif2_lexer.o build/temp.linux-x86_64-cpython-312/src/components/codcif/cif_compiler.o build/temp.linux-x86_64-cpython-312/src/components/codcif/cif_grammar.tab.o build/temp.linux-x86_64-cpython-312/src/components/codcif/cif_grammar_flex.o build/temp.linux-x86_64-cpython-312/src/components/codcif/cif_lex_buffer.o build/temp.linux-x86_64-cpython-312/src/components/codcif/cif_lexer.o build/temp.linux-x86_64-cpython-312/src/components/codcif/cif_options.o build/temp.linux-x86_64-cpython-312/src/components/codcif/ciflist.o build/temp.linux-x86_64-cpython-312/src/components/codcif/cifmessage.o build/temp.linux-x86_64-cpython-312/src/components/codcif/ciftable.o build/temp.linux-x86_64-cpython-312/src/components/codcif/cifvalue.o build/temp.linux-x86_64-cpython-312/src/components/codcif/common.o build/temp.linux-x86_64-cpython-312/src/components/codcif/datablock.o build/temp.linux-x86_64-cpython-312/src/externals/cexceptions/allocx.o build/temp.linux-x86_64-cpython-312/src/externals/cexceptions/cexceptions.o build/temp.linux-x86_64-cpython-312/src/externals/cexceptions/cxprintf.o build/temp.linux-x86_64-cpython-312/src/externals/cexceptions/stdiox.o build/temp.linux-x86_64-cpython-312/src/externals/cexceptions/stringx.o -L/usr/lib/x86_64-linux-gnu -o /<>/.pybuild/cpython3_3.12_pycodcif/build/pycodcif/_pycodcif.cpython-312-x86_64-linux-gnu.so copying ./__init__.py -> /<>/.pybuild/cpython3_3.12_pycodcif/build/pycodcif copying ./pycodcif.py -> /<>/.pybuild/cpython3_3.12_pycodcif/build/pycodcif running install_lib creating /<>/debian/python3-pycodcif creating /<>/debian/python3-pycodcif/usr creating /<>/debian/python3-pycodcif/usr/lib creating /<>/debian/python3-pycodcif/usr/lib/python3.12 creating /<>/debian/python3-pycodcif/usr/lib/python3.12/dist-packages creating /<>/debian/python3-pycodcif/usr/lib/python3.12/dist-packages/pycodcif copying /<>/.pybuild/cpython3_3.12_pycodcif/build/pycodcif/__init__.py -> /<>/debian/python3-pycodcif/usr/lib/python3.12/dist-packages/pycodcif copying /<>/.pybuild/cpython3_3.12_pycodcif/build/pycodcif/pycodcif.py -> /<>/debian/python3-pycodcif/usr/lib/python3.12/dist-packages/pycodcif copying /<>/.pybuild/cpython3_3.12_pycodcif/build/pycodcif/_pycodcif.cpython-312-x86_64-linux-gnu.so -> /<>/debian/python3-pycodcif/usr/lib/python3.12/dist-packages/pycodcif byte-compiling /<>/debian/python3-pycodcif/usr/lib/python3.12/dist-packages/pycodcif/__init__.py to __init__.cpython-312.pyc byte-compiling /<>/debian/python3-pycodcif/usr/lib/python3.12/dist-packages/pycodcif/pycodcif.py to pycodcif.cpython-312.pyc running install_egg_info running egg_info writing pycodcif.egg-info/PKG-INFO writing dependency_links to pycodcif.egg-info/dependency_links.txt writing top-level names to pycodcif.egg-info/top_level.txt reading manifest file 'pycodcif.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pycodcif.egg-info/SOURCES.txt' Copying pycodcif.egg-info to /<>/debian/python3-pycodcif/usr/lib/python3.12/dist-packages/pycodcif-3.10.0.egg-info Skipping SOURCES.txt running install_scripts I: pybuild base:311: /usr/bin/python3 setup.py install --root /<>/debian/python3-pycodcif running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running build_ext building 'pycodcif._pycodcif' extension swigging pycodcif.i to pycodcif_wrap.c swig -python -o pycodcif_wrap.c pycodcif.i x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c pycodcif.c -o build/temp.linux-x86_64-cpython-311/pycodcif.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c pycodcif_wrap.c -o build/temp.linux-x86_64-cpython-311/pycodcif_wrap.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif2_grammar.tab.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif2_grammar.tab.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif2_lexer.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif2_lexer.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif_compiler.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_compiler.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif_grammar.tab.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_grammar.tab.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif_grammar_flex.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_grammar_flex.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif_lex_buffer.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_lex_buffer.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif_lexer.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_lexer.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cif_options.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_options.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/ciflist.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/ciflist.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cifmessage.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cifmessage.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/ciftable.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/ciftable.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/cifvalue.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/cifvalue.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/common.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/common.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/components/codcif/datablock.c -o build/temp.linux-x86_64-cpython-311/src/components/codcif/datablock.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/externals/cexceptions/allocx.c -o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/allocx.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/externals/cexceptions/cexceptions.c -o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/cexceptions.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/externals/cexceptions/cxprintf.c -o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/cxprintf.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/externals/cexceptions/stdiox.c -o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/stdiox.o x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_YACC_ -DYYDEBUG=1 -DHAS_VSNPRINTF -Isrc/externals/cexceptions -Isrc/components/codcif -I/usr/include/python3.11 -c src/externals/cexceptions/stringx.c -o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/stringx.o creating /<>/.pybuild/cpython3_3.11_pycodcif/build/pycodcif x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-311/pycodcif.o build/temp.linux-x86_64-cpython-311/pycodcif_wrap.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif2_grammar.tab.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif2_lexer.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_compiler.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_grammar.tab.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_grammar_flex.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_lex_buffer.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_lexer.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cif_options.o build/temp.linux-x86_64-cpython-311/src/components/codcif/ciflist.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cifmessage.o build/temp.linux-x86_64-cpython-311/src/components/codcif/ciftable.o build/temp.linux-x86_64-cpython-311/src/components/codcif/cifvalue.o build/temp.linux-x86_64-cpython-311/src/components/codcif/common.o build/temp.linux-x86_64-cpython-311/src/components/codcif/datablock.o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/allocx.o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/cexceptions.o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/cxprintf.o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/stdiox.o build/temp.linux-x86_64-cpython-311/src/externals/cexceptions/stringx.o -L/usr/lib/x86_64-linux-gnu -o /<>/.pybuild/cpython3_3.11_pycodcif/build/pycodcif/_pycodcif.cpython-311-x86_64-linux-gnu.so copying ./__init__.py -> /<>/.pybuild/cpython3_3.11_pycodcif/build/pycodcif copying ./pycodcif.py -> /<>/.pybuild/cpython3_3.11_pycodcif/build/pycodcif running install_lib creating /<>/debian/python3-pycodcif/usr/lib/python3.11 creating /<>/debian/python3-pycodcif/usr/lib/python3.11/dist-packages creating /<>/debian/python3-pycodcif/usr/lib/python3.11/dist-packages/pycodcif copying /<>/.pybuild/cpython3_3.11_pycodcif/build/pycodcif/__init__.py -> /<>/debian/python3-pycodcif/usr/lib/python3.11/dist-packages/pycodcif copying /<>/.pybuild/cpython3_3.11_pycodcif/build/pycodcif/pycodcif.py -> /<>/debian/python3-pycodcif/usr/lib/python3.11/dist-packages/pycodcif copying /<>/.pybuild/cpython3_3.11_pycodcif/build/pycodcif/_pycodcif.cpython-311-x86_64-linux-gnu.so -> /<>/debian/python3-pycodcif/usr/lib/python3.11/dist-packages/pycodcif byte-compiling /<>/debian/python3-pycodcif/usr/lib/python3.11/dist-packages/pycodcif/__init__.py to __init__.cpython-311.pyc byte-compiling /<>/debian/python3-pycodcif/usr/lib/python3.11/dist-packages/pycodcif/pycodcif.py to pycodcif.cpython-311.pyc running install_egg_info running egg_info writing pycodcif.egg-info/PKG-INFO writing dependency_links to pycodcif.egg-info/dependency_links.txt writing top-level names to pycodcif.egg-info/top_level.txt reading manifest file 'pycodcif.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pycodcif.egg-info/SOURCES.txt' Copying pycodcif.egg-info to /<>/debian/python3-pycodcif/usr/lib/python3.11/dist-packages/pycodcif-3.10.0.egg-info Skipping SOURCES.txt running install_scripts make[1]: Leaving directory '/<>' debian/rules override_dh_install-arch make[1]: Entering directory '/<>' mkdir --parents debian/tmp//usr/lib/x86_64-linux-gnu/perl5/5.38/COD/CIF/Parser mv debian/tmp/usr/lib/perl5/auto debian/tmp//usr/lib/x86_64-linux-gnu/perl5/5.38 mv debian/tmp/usr/lib/perl5/COD/SPGLib.pm debian/tmp//usr/lib/x86_64-linux-gnu/perl5/5.38/COD mv debian/tmp/usr/lib/perl5/COD/CIF/Parser/Bison.pm debian/tmp//usr/lib/x86_64-linux-gnu/perl5/5.38/COD/CIF/Parser dh_install make[1]: Leaving directory '/<>' dh_installdocs -O--no-parallel debian/rules override_dh_installchangelogs make[1]: Entering directory '/<>' dh_installchangelogs CHANGELOG make[1]: Leaving directory '/<>' dh_installman -O--no-parallel dh_python3 -O--no-parallel dh_installsystemduser -O--no-parallel dh_perl -O--no-parallel dh_link -O--no-parallel dh_strip_nondeterminism -O--no-parallel dh_compress -O--no-parallel dh_fixperms -O--no-parallel dh_missing -O--no-parallel dh_dwz -a -O--no-parallel dh_strip -a -O--no-parallel dh_makeshlibs -a -O--no-parallel dh_shlibdeps -a -O--no-parallel dpkg-shlibdeps: warning: symbol cxprintf used by debian/libcodcif3/usr/lib/x86_64-linux-gnu/libcodcif.so.3.10.0 found in none of the libraries dpkg-shlibdeps: warning: symbol fclosex used by debian/libcodcif3/usr/lib/x86_64-linux-gnu/libcodcif.so.3.10.0 found in none of the libraries dpkg-shlibdeps: warning: symbol callocx used by debian/libcodcif3/usr/lib/x86_64-linux-gnu/libcodcif.so.3.10.0 found in none of the libraries dpkg-shlibdeps: warning: symbol progname used by debian/libcodcif3/usr/lib/x86_64-linux-gnu/libcodcif.so.3.10.0 found in none of the libraries dpkg-shlibdeps: warning: symbol mallocx used by debian/libcodcif3/usr/lib/x86_64-linux-gnu/libcodcif.so.3.10.0 found in none of the libraries dpkg-shlibdeps: warning: symbol reallocx used by debian/libcodcif3/usr/lib/x86_64-linux-gnu/libcodcif.so.3.10.0 found in none of the libraries dpkg-shlibdeps: warning: symbol cexception_reraise used by debian/libcodcif3/usr/lib/x86_64-linux-gnu/libcodcif.so.3.10.0 found in none of the libraries dpkg-shlibdeps: warning: symbol freex used by debian/libcodcif3/usr/lib/x86_64-linux-gnu/libcodcif.so.3.10.0 found in none of the libraries dpkg-shlibdeps: warning: symbol strdupx used by debian/libcodcif3/usr/lib/x86_64-linux-gnu/libcodcif.so.3.10.0 found in none of the libraries dpkg-shlibdeps: warning: symbol fopenx used by debian/libcodcif3/usr/lib/x86_64-linux-gnu/libcodcif.so.3.10.0 found in none of the libraries dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: symbol cxprintf used by debian/libgetoptions0/usr/lib/x86_64-linux-gnu/libgetoptions.so.0.01 found in none of the libraries dpkg-shlibdeps: warning: symbol cexception_raise_at used by debian/libgetoptions0/usr/lib/x86_64-linux-gnu/libgetoptions.so.0.01 found in none of the libraries dpkg-shlibdeps: warning: symbol reallocx used by debian/libgetoptions0/usr/lib/x86_64-linux-gnu/libgetoptions.so.0.01 found in none of the libraries dpkg-shlibdeps: warning: symbol cexception_reraise used by debian/libgetoptions0/usr/lib/x86_64-linux-gnu/libgetoptions.so.0.01 found in none of the libraries dpkg-shlibdeps: warning: symbol callocx used by debian/libgetoptions0/usr/lib/x86_64-linux-gnu/libgetoptions.so.0.01 found in none of the libraries dh_installdeb -O--no-parallel dh_gencontrol -O--no-parallel dpkg-gencontrol: warning: Depends field of package cod-tools: substitution variable ${perl:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package cod-tools: substitution variable ${perl:Depends} used, but is not defined dpkg-gencontrol: warning: Provides field of package python3-pycodcif: substitution variable ${python3:Provides} used, but is not defined dpkg-gencontrol: warning: package python3-pycodcif: substitution variable ${python3:Versions} used, but is not defined dpkg-gencontrol: warning: Provides field of package python3-pycodcif: substitution variable ${python3:Provides} used, but is not defined dpkg-gencontrol: warning: package python3-pycodcif: substitution variable ${python3:Versions} used, but is not defined dh_md5sums -O--no-parallel dh_builddeb -O--no-parallel dpkg-deb: building package 'libcodcif3' in '../libcodcif3_3.10.0+dfsg-1_amd64.deb'. dpkg-deb: building package 'cod-tools' in '../cod-tools_3.10.0+dfsg-1_amd64.deb'. dpkg-deb: building package 'libcodcif3-dbgsym' in '../libcodcif3-dbgsym_3.10.0+dfsg-1_amd64.deb'. dpkg-deb: building package 'libgetoptions-dev' in '../libgetoptions-dev_3.10.0+dfsg-1_amd64.deb'. dpkg-deb: building package 'libgetoptions0' in '../libgetoptions0_3.10.0+dfsg-1_amd64.deb'. dpkg-deb: building package 'libgetoptions0-dbgsym' in '../libgetoptions0-dbgsym_3.10.0+dfsg-1_amd64.deb'. dpkg-deb: building package 'python3-pycodcif' in '../python3-pycodcif_3.10.0+dfsg-1_amd64.deb'. dpkg-deb: building package 'python3-pycodcif-dbgsym' in '../python3-pycodcif-dbgsym_3.10.0+dfsg-1_amd64.deb'. dpkg-deb: building package 'cod-tools-dbgsym' in '../cod-tools-dbgsym_3.10.0+dfsg-1_amd64.deb'. dpkg-deb: building package 'libcexceptions-dev' in '../libcexceptions-dev_3.10.0+dfsg-1_amd64.deb'. dpkg-deb: building package 'libcexceptions0' in '../libcexceptions0_3.10.0+dfsg-1_amd64.deb'. dpkg-deb: building package 'libcexceptions0-dbgsym' in '../libcexceptions0-dbgsym_3.10.0+dfsg-1_amd64.deb'. dpkg-deb: building package 'libcod-tools-perl' in '../libcod-tools-perl_3.10.0+dfsg-1_amd64.deb'. dpkg-deb: building package 'libcod-tools-perl-dbgsym' in '../libcod-tools-perl-dbgsym_3.10.0+dfsg-1_amd64.deb'. dpkg-deb: building package 'libcodcif-dev' in '../libcodcif-dev_3.10.0+dfsg-1_amd64.deb'. dpkg-genbuildinfo -O../cod-tools_3.10.0+dfsg-1_amd64.buildinfo dpkg-genchanges -O../cod-tools_3.10.0+dfsg-1_amd64.changes dpkg-genchanges: info: including full source code in upload dpkg-source -Zxz --after-build . dpkg-buildpackage: info: full upload (original source is included) -------------------------------------------------------------------------------- Build finished at 2024-06-02T15:19:45Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ cod-tools_3.10.0+dfsg-1_amd64.changes: -------------------------------------- Format: 1.8 Date: Thu, 30 May 2024 01:59:28 -0400 Source: cod-tools Binary: cod-tools cod-tools-dbgsym libcexceptions-dev libcexceptions0 libcexceptions0-dbgsym libcod-tools-perl libcod-tools-perl-dbgsym libcodcif-dev libcodcif3 libcodcif3-dbgsym libgetoptions-dev libgetoptions0 libgetoptions0-dbgsym python3-pycodcif python3-pycodcif-dbgsym Architecture: source amd64 Version: 3.10.0+dfsg-1 Distribution: sid Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Andrius Merkys Description: cod-tools - tools for manipulating CIF format files libcexceptions-dev - C exception handling library (development files) libcexceptions0 - C exception handling library libcod-tools-perl - tools for manipulating CIF format files - Perl modules libcodcif-dev - error-correcting CIF parser - headers and static libraries libcodcif3 - error-correcting CIF parser - shared library libgetoptions-dev - Command line argument processing library for C (development files libgetoptions0 - Command line argument processing library for C python3-pycodcif - error-correcting CIF parser - Python3 bindings Changes: cod-tools (3.10.0+dfsg-1) unstable; urgency=medium . * New upstream version 3.10.0+dfsg Checksums-Sha1: 49ee4b00f91547c17d982ef8acd433979a10bac6 2495 cod-tools_3.10.0+dfsg-1.dsc 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20231003.0-2), libisl23 (= 0.26-3+b2), libitm1 (= 14.1.0-1), libjansson4 (= 2.14-2+b2), libjs-jquery (= 3.6.1+dfsg+~3.5.14-1), libjs-sphinxdoc (= 7.2.6-8), libjs-underscore (= 1.13.4~dfsg+~1.11.4-3), libjson-perl (= 4.10000-1), libk5crypto3 (= 1.20.1-6+b1), libkeyutils1 (= 1.6.3-3), libkrb5-3 (= 1.20.1-6+b1), libkrb5support0 (= 1.20.1-6+b1), libldap-2.5-0 (= 2.5.17+dfsg-1), liblist-moreutils-perl (= 0.430-2), liblist-moreutils-xs-perl (= 0.430-4+b1), liblsan0 (= 14.1.0-1), liblzma5 (= 5.6.1+really5.4.5-1), libmagic-mgc (= 1:5.45-3), libmagic1t64 (= 1:5.45-3), libmariadb3 (= 1:10.11.8-1), libmd0 (= 1.1.0-2), libmodule-implementation-perl (= 0.09-2), libmodule-runtime-perl (= 0.016-2), libmodule-scandeps-perl (= 1.35-1), libmount1 (= 2.40.1-4), libmpc3 (= 1.3.1-1+b2), libmpfr6 (= 4.2.1-1+b1), libmro-compat-perl (= 0.15-2), libnamespace-autoclean-perl (= 0.29-2), libnamespace-clean-perl (= 0.27-2), libnauty-2.8.8 (= 2.8.8+ds-5), libncursesw6 (= 6.5-2), libnettle8t64 (= 3.9.1-2.2), libnghttp2-14 (= 1.61.0-1+b1), libnumber-compare-perl (= 0.03-3), libp11-kit0 (= 0.25.3-5), libpackage-stash-perl (= 0.40-1), libpam-modules (= 1.5.3-7), libpam-modules-bin (= 1.5.3-7), libpam-runtime (= 1.5.3-7), libpam0g (= 1.5.3-7), libparams-classify-perl (= 0.015-2+b3), libparams-util-perl (= 1.102-3), libparams-validationcompiler-perl (= 0.31-1), libparse-yapp-perl (= 1.21-3), libpcre2-8-0 (= 10.42-4+b1), libperl5.38t64 (= 5.38.2-5), libpipeline1 (= 1.5.7-2), libpsl5t64 (= 0.21.2-1.1), libpython3-all-dev (= 3.11.8-1), libpython3-dev (= 3.11.8-1), libpython3-stdlib (= 3.11.8-1), libpython3.11-dev (= 3.11.9-1), libpython3.11-minimal (= 3.11.9-1), libpython3.11-stdlib (= 3.11.9-1), libpython3.11t64 (= 3.11.9-1), libpython3.12-dev (= 3.12.3-1), libpython3.12-minimal (= 3.12.3-1), libpython3.12-stdlib (= 3.12.3-1), libpython3.12t64 (= 3.12.3-1), libquadmath0 (= 14.1.0-1), libreadline8t64 (= 8.2-4), librole-tiny-perl (= 2.002004-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b4), libsasl2-2 (= 2.1.28+dfsg1-6), libsasl2-modules-db (= 2.1.28+dfsg1-6), libseccomp2 (= 2.5.5-1), libselinux1 (= 3.5-2+b2), libset-object-perl (= 1.42-1+b4), libsframe1 (= 2.42-4), libsigsegv2 (= 2.14-1+b1), libsmartcols1 (= 2.40.1-4), libspecio-perl (= 0.48-1), libsqlite3-0 (= 3.46.0-1), libssh2-1t64 (= 1.11.0-5), libssl3t64 (= 3.2.1-3), libstdc++-13-dev (= 13.2.0-25), libstdc++6 (= 14.1.0-1), libsub-exporter-perl (= 0.990-1), libsub-exporter-progressive-perl (= 0.001013-3), libsub-identify-perl (= 0.14-3+b2), libsub-install-perl (= 0.929-1), libsub-name-perl (= 0.27-1+b2), libsub-quote-perl (= 2.006008-1), libsymspg-dev (= 2.4.0-1), libsymspg2 (= 2.4.0-1), libsystemd0 (= 256~rc3-7), libtasn1-6 (= 4.19.0-3+b2), libtext-diff-perl (= 1.45-2), libtext-glob-perl (= 0.11-3), libtext-unidecode-perl (= 1.30-3), libtime-duration-perl (= 1.21-2), libtimedate-perl (= 2.3300-2), libtinfo6 (= 6.5-2), libtool (= 2.4.7-7), libtry-tiny-perl (= 0.31-2), libtsan2 (= 14.1.0-1), libubsan1 (= 14.1.0-1), libuchardet0 (= 0.0.8-1+b1), libudev1 (= 256~rc3-7), libunistring5 (= 1.2-1), liburi-perl (= 5.28-1), libuuid1 (= 2.40.1-4), libvariable-magic-perl (= 0.64-1), libwww-curl-perl (= 4.17-10+b2), libxml-libxml-perl (= 2.0207+dfsg+really+2.0134-3), libxml-namespacesupport-perl (= 1.12-2), libxml-sax-base-perl (= 1.09-3), libxml-sax-perl (= 1.02+dfsg-3), libxml-simple-perl (= 2.25-2), libxml2 (= 2.12.7+dfsg-2), libxstring-perl (= 0.005-2+b3), libzstd1 (= 1.5.5+dfsg2-2), linux-libc-dev (= 6.8.12-1), login (= 1:4.13+dfsg1-4), m4 (= 1.4.19-4), make (= 4.3-4.1), man-db (= 2.12.1-1), mariadb-common (= 1:10.11.8-1), mawk (= 1.3.4.20240123-1), media-types (= 10.1.0), moreutils (= 0.69-1), mysql-common (= 5.8+1.1.0), ncurses-base (= 6.5-2), ncurses-bin (= 6.5-2), netbase (= 6.4), patch (= 2.7.6-7), perl (= 5.38.2-5), perl-base (= 5.38.2-5), perl-modules-5.38 (= 5.38.2-5), po-debconf (= 1.0.21+nmu1), python3 (= 3.11.8-1), python3-all (= 3.11.8-1), python3-all-dev (= 3.11.8-1), python3-dev (= 3.11.8-1), python3-distutils (= 3.12.3-3.1), python3-lib2to3 (= 3.12.3-3.1), python3-minimal (= 3.11.8-1), python3-pkg-resources (= 68.1.2-2), python3-setuptools (= 68.1.2-2), python3.11 (= 3.11.9-1), python3.11-dev (= 3.11.9-1), python3.11-minimal (= 3.11.9-1), python3.12 (= 3.12.3-1), python3.12-dev (= 3.12.3-1), python3.12-minimal (= 3.12.3-1), readline-common (= 8.2-4), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.22), swig (= 4.2.1-1), sysvinit-utils (= 3.09-1), tar (= 1.35+dfsg-3), tree (= 2.1.1-2), tzdata (= 2024a-4), ucf (= 3.0043+nmu1), usr-is-merged (= 39), util-linux (= 2.40.1-4), xz-utils (= 5.6.1+really5.4.5-1), zlib1g (= 1:1.3.dfsg+really1.3.1-1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1) Environment: DEB_BUILD_OPTIONS="parallel=2" LANG="en_GB.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" LD_LIBRARY_PATH="/usr/lib/libeatmydata" SOURCE_DATE_EPOCH="1717048768" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ cod-tools-dbgsym_3.10.0+dfsg-1_amd64.deb ---------------------------------------- new Debian package, version 2.0. size 326396 bytes: control archive=696 bytes. 479 bytes, 12 lines control 404 bytes, 4 lines md5sums Package: cod-tools-dbgsym Source: cod-tools Version: 3.10.0+dfsg-1 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian Science Maintainers Installed-Size: 400 Depends: cod-tools (= 3.10.0+dfsg-1) Section: debug Priority: optional Description: debug symbols for cod-tools Build-Ids: 0d860c5d8af4579d1c0ebfff88dc07297ef4b800 a8573481f75bd77107cd83abc0cd1a2244c2de12 d51396a29a69f95f09919af4cd17e6b5a9d6f961 drwxr-xr-x root/root 0 2024-05-30 05:59 ./ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/debug/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/debug/.build-id/0d/ -rw-r--r-- root/root 126664 2024-05-30 05:59 ./usr/lib/debug/.build-id/0d/860c5d8af4579d1c0ebfff88dc07297ef4b800.debug drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/debug/.build-id/a8/ -rw-r--r-- root/root 124992 2024-05-30 05:59 ./usr/lib/debug/.build-id/a8/573481f75bd77107cd83abc0cd1a2244c2de12.debug drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/debug/.build-id/d5/ -rw-r--r-- root/root 127320 2024-05-30 05:59 ./usr/lib/debug/.build-id/d5/1396a29a69f95f09919af4cd17e6b5a9d6f961.debug drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/debug/.dwz/x86_64-linux-gnu/ -rw-r--r-- root/root 13368 2024-05-30 05:59 ./usr/lib/debug/.dwz/x86_64-linux-gnu/cod-tools.debug drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/doc/ lrwxrwxrwx root/root 0 2024-05-30 05:59 ./usr/share/doc/cod-tools-dbgsym -> cod-tools cod-tools_3.10.0+dfsg-1_amd64.deb --------------------------------- new Debian package, version 2.0. size 350804 bytes: control archive=5380 bytes. 737 bytes, 13 lines control 12421 bytes, 191 lines md5sums Package: cod-tools Version: 3.10.0+dfsg-1 Architecture: amd64 Maintainer: Debian Science Maintainers Installed-Size: 1876 Depends: curl, gawk, libclone-perl, libcod-tools-perl, libdbd-mysql-perl, libdbd-sqlite3-perl, libdbi-perl, libdigest-sha-perl, libgraph-nauty-perl, libhtml-parser-perl, libjson-perl, liblist-moreutils-perl, libwww-curl-perl, libxml-simple-perl, openbabel, perl, libc6 (>= 2.34) Section: science Priority: optional Homepage: https://wiki.crystallography.net/cod-tools Description: tools for manipulating CIF format files cod-tools is a set of Perl modules and command line tools for manipulating Crystallographic Information Format (CIF) v1.1 and v2.0 files. drwxr-xr-x root/root 0 2024-05-30 05:59 ./ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/bin/ -rwxr-xr-x root/root 1224 2024-05-30 05:59 ./usr/bin/cif-to-utf8 -rwxr-xr-x root/root 15035 2024-05-30 05:59 ./usr/bin/cif2cod -rwxr-xr-x root/root 5291 2024-05-30 05:59 ./usr/bin/cif2csv -rwxr-xr-x root/root 5206 2024-05-30 05:59 ./usr/bin/cif2json -rwxr-xr-x root/root 16871 2024-05-30 05:59 ./usr/bin/cif2rdf -rwxr-xr-x root/root 8476 2024-05-30 05:59 ./usr/bin/cif2ref -rwxr-xr-x root/root 11064 2024-05-30 05:59 ./usr/bin/cif2xyz -rwxr-xr-x root/root 3074 2024-05-30 05:59 ./usr/bin/cif_CODify -rwxr-xr-x root/root 37230 2024-05-30 05:59 ./usr/bin/cif_Fcalc -rwxr-xr-x root/root 4200 2024-05-30 05:59 ./usr/bin/cif_adjust_journal_name_volume -rwxr-xr-x root/root 6613 2024-05-30 05:59 ./usr/bin/cif_automorphism -rwxr-xr-x root/root 6641 2024-05-30 05:59 ./usr/bin/cif_bounding_box -rwxr-xr-x root/root 7805 2024-05-30 05:59 ./usr/bin/cif_cell_contents -rwxr-xr-x root/root 3574 2024-05-30 05:59 ./usr/bin/cif_classify -rwxr-xr-x root/root 47700 2024-05-30 05:59 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05:59 ./usr/bin/cosets -rwxr-xr-x root/root 3528 2024-05-30 05:59 ./usr/bin/ddl1-to-ddlm -rwxr-xr-x root/root 20775 2024-05-30 05:59 ./usr/bin/ddlm_validate -rwxr-xr-x root/root 12335 2024-05-30 05:59 ./usr/bin/dic2markdown -rwxr-xr-x root/root 10805 2024-05-30 05:59 ./usr/bin/fetch_cif_dict -rwxr-xr-x root/root 6008 2024-05-30 05:59 ./usr/bin/find_numbers -rwxr-xr-x root/root 1275 2024-05-30 05:59 ./usr/bin/formula_sum -rwxr-xr-x root/root 4845 2024-05-30 05:59 ./usr/bin/json2cif -rwxr-xr-x root/root 4859 2024-05-30 05:59 ./usr/bin/molcif2sdf -rwxr-xr-x root/root 3708 2024-05-30 05:59 ./usr/bin/msg_parse -rwxr-xr-x root/root 17212 2024-05-30 05:59 ./usr/bin/oqmd2cif -rwxr-xr-x root/root 9020 2024-05-30 05:59 ./usr/bin/sdf_add_cod_data -rwxr-xr-x root/root 2627 2024-05-30 05:59 ./usr/bin/ssg3d -rwxr-xr-x root/root 1292 2024-05-30 05:59 ./usr/bin/ssg_symop_canonical -rwxr-xr-x root/root 1369 2024-05-30 05:59 ./usr/bin/ssg_symop_check -rwxr-xr-x root/root 1690 2024-05-30 05:59 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libcexceptions-dev_3.10.0+dfsg-1_amd64.deb ------------------------------------------ new Debian package, version 2.0. size 37968 bytes: control archive=940 bytes. 628 bytes, 17 lines control 603 bytes, 9 lines md5sums Package: libcexceptions-dev Source: cod-tools Version: 3.10.0+dfsg-1 Architecture: amd64 Maintainer: Debian Science Maintainers Installed-Size: 66 Depends: libcexceptions0 (= 3.10.0+dfsg-1) Section: libdevel Priority: optional Multi-Arch: same Homepage: https://wiki.crystallography.net/cod-tools Description: C exception handling library (development files) Wrappers for C functions, allowing usage of try ... catch ... blocks in C language. Wrapped functions include memory allocation, standard I/O and strdup. . 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./usr/share/perl5/COD/Spacegroups/Symop/Parse.pm -rw-r--r-- root/root 6126 2024-05-30 05:59 ./usr/share/perl5/COD/Spacegroups/Symop/SSGParse.pm -rw-r--r-- root/root 1190 2024-05-30 05:59 ./usr/share/perl5/COD/ToolsVersion.pm -rw-r--r-- root/root 9840 2024-05-30 05:59 ./usr/share/perl5/COD/UserMessage.pm -rw-r--r-- root/root 3089 2024-05-30 05:59 ./usr/share/perl5/COD/XYZ.pm libcodcif-dev_3.10.0+dfsg-1_amd64.deb ------------------------------------- new Debian package, version 2.0. size 83608 bytes: control archive=1324 bytes. 681 bytes, 17 lines control 1421 bytes, 23 lines md5sums Package: libcodcif-dev Source: cod-tools Version: 3.10.0+dfsg-1 Architecture: amd64 Maintainer: Debian Science Maintainers Installed-Size: 320 Depends: libcodcif3 (= 3.10.0+dfsg-1) Section: libdevel Priority: optional Multi-Arch: same Homepage: https://wiki.crystallography.net/cod-tools Description: error-correcting CIF parser - headers and static libraries Parser for Crystallographic Information Format (CIF) v1.1 and v2.0, written in C language. A CIF format file is represented by an array of data blocks, where each data block is represented by a CIF struct. . This package contains static library and header files. drwxr-xr-x root/root 0 2024-05-30 05:59 ./ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/include/ -rw-r--r-- root/root 2929 2024-05-30 05:59 ./usr/include/cif.h -rw-r--r-- root/root 3912 2024-05-30 05:59 ./usr/include/cif2_grammar.tab.h -rw-r--r-- root/root 708 2024-05-30 05:59 ./usr/include/cif2_grammar_y.h -rw-r--r-- root/root 824 2024-05-30 05:59 ./usr/include/cif2_lexer.h -rw-r--r-- root/root 3892 2024-05-30 05:59 ./usr/include/cif_compiler.h -rw-r--r-- root/root 3659 2024-05-30 05:59 ./usr/include/cif_grammar.tab.h -rw-r--r-- root/root 1622 2024-05-30 05:59 ./usr/include/cif_grammar_flex.h -rw-r--r-- root/root 703 2024-05-30 05:59 ./usr/include/cif_grammar_y.h -rw-r--r-- root/root 1417 2024-05-30 05:59 ./usr/include/cif_lex_buffer.h -rw-r--r-- root/root 814 2024-05-30 05:59 ./usr/include/cif_lexer.h -rw-r--r-- root/root 1687 2024-05-30 05:59 ./usr/include/cif_options.h -rw-r--r-- root/root 1030 2024-05-30 05:59 ./usr/include/ciflist.h -rw-r--r-- root/root 1977 2024-05-30 05:59 ./usr/include/cifmessage.h -rw-r--r-- root/root 879 2024-05-30 05:59 ./usr/include/ciftable.h -rw-r--r-- root/root 1375 2024-05-30 05:59 ./usr/include/cifvalue.h -rw-r--r-- root/root 1078 2024-05-30 05:59 ./usr/include/common.h -rw-r--r-- root/root 3108 2024-05-30 05:59 ./usr/include/datablock.h -rw-r--r-- root/root 461 2024-05-30 05:59 ./usr/include/version.h -rw-r--r-- root/root 277 2024-05-30 05:59 ./usr/include/yy.h drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/x86_64-linux-gnu/ -rw-r--r-- root/root 241382 2024-05-30 05:59 ./usr/lib/x86_64-linux-gnu/libcodcif.a lrwxrwxrwx root/root 0 2024-05-30 05:59 ./usr/lib/x86_64-linux-gnu/libcodcif.so -> libcodcif.so.3 drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/doc/libcodcif-dev/ -rw-r--r-- root/root 2132 2024-05-30 05:59 ./usr/share/doc/libcodcif-dev/changelog.Debian.gz -rw-r--r-- root/root 28944 2024-05-24 11:43 ./usr/share/doc/libcodcif-dev/changelog.gz -rw-r--r-- root/root 1904 2024-05-30 05:54 ./usr/share/doc/libcodcif-dev/copyright libcodcif3-dbgsym_3.10.0+dfsg-1_amd64.deb ----------------------------------------- new Debian package, version 2.0. size 100508 bytes: control archive=556 bytes. 417 bytes, 13 lines control 106 bytes, 1 lines md5sums Package: libcodcif3-dbgsym Source: cod-tools Version: 3.10.0+dfsg-1 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian Science Maintainers Installed-Size: 123 Depends: libcodcif3 (= 3.10.0+dfsg-1) Section: debug Priority: optional Multi-Arch: same Description: debug symbols for libcodcif3 Build-Ids: ed4455ae0840f194c5255a40d99dbda419a99519 drwxr-xr-x root/root 0 2024-05-30 05:59 ./ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/debug/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/debug/.build-id/ed/ -rw-r--r-- root/root 115168 2024-05-30 05:59 ./usr/lib/debug/.build-id/ed/4455ae0840f194c5255a40d99dbda419a99519.debug drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/doc/ lrwxrwxrwx root/root 0 2024-05-30 05:59 ./usr/share/doc/libcodcif3-dbgsym -> libcodcif3 libcodcif3_3.10.0+dfsg-1_amd64.deb ---------------------------------- new Debian package, version 2.0. size 76984 bytes: control archive=2320 bytes. 624 bytes, 15 lines control 299 bytes, 4 lines md5sums 40 bytes, 1 lines shlibs 7922 bytes, 248 lines symbols 68 bytes, 2 lines triggers Package: libcodcif3 Source: cod-tools Version: 3.10.0+dfsg-1 Architecture: amd64 Maintainer: Debian Science Maintainers Installed-Size: 167 Depends: libcexceptions0 (>= 3.10.0+dfsg-1), libc6 (>= 2.29) Section: libs Priority: optional Multi-Arch: same Homepage: https://wiki.crystallography.net/cod-tools Description: error-correcting CIF parser - shared library Parser for Crystallographic Information Format (CIF) v1.1 and v2.0, written in C language. A CIF format file is represented by an array of data blocks, where each data block is represented by a CIF struct. drwxr-xr-x root/root 0 2024-05-30 05:59 ./ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/x86_64-linux-gnu/ lrwxrwxrwx root/root 0 2024-05-30 05:59 ./usr/lib/x86_64-linux-gnu/libcodcif.so.3 -> libcodcif.so.3.10.0 -rw-r--r-- root/root 116704 2024-05-30 05:59 ./usr/lib/x86_64-linux-gnu/libcodcif.so.3.10.0 drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/doc/libcodcif3/ -rw-r--r-- root/root 2129 2024-05-30 05:59 ./usr/share/doc/libcodcif3/changelog.Debian.gz -rw-r--r-- root/root 28944 2024-05-24 11:43 ./usr/share/doc/libcodcif3/changelog.gz -rw-r--r-- root/root 1904 2024-05-30 05:54 ./usr/share/doc/libcodcif3/copyright libgetoptions-dev_3.10.0+dfsg-1_amd64.deb ----------------------------------------- new Debian package, version 2.0. size 37708 bytes: control archive=856 bytes. 717 bytes, 18 lines control 375 bytes, 5 lines md5sums Package: libgetoptions-dev Source: cod-tools Version: 3.10.0+dfsg-1 Architecture: amd64 Maintainer: Debian Science Maintainers Installed-Size: 57 Depends: libgetoptions0 (= 3.10.0+dfsg-1) Section: libdevel Priority: optional Multi-Arch: same Homepage: https://wiki.crystallography.net/cod-tools Description: Command line argument processing library for C (development files) C library for processing GNU-like command line options. The library uses C the exception handling library and is used for developing programs using codcif, an error-correcting Crystallographic Information Format (CIF) parser. . This package contains static library and header files. drwxr-xr-x root/root 0 2024-05-30 05:59 ./ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/include/ -rw-r--r-- root/root 1839 2024-05-30 05:59 ./usr/include/getoptions.h drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/x86_64-linux-gnu/ -rw-r--r-- root/root 10710 2024-05-30 05:59 ./usr/lib/x86_64-linux-gnu/libgetoptions.a lrwxrwxrwx root/root 0 2024-05-30 05:59 ./usr/lib/x86_64-linux-gnu/libgetoptions.so -> libgetoptions.so.0 drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/doc/libgetoptions-dev/ -rw-r--r-- root/root 2136 2024-05-30 05:59 ./usr/share/doc/libgetoptions-dev/changelog.Debian.gz -rw-r--r-- root/root 28944 2024-05-24 11:43 ./usr/share/doc/libgetoptions-dev/changelog.gz -rw-r--r-- root/root 1904 2024-05-30 05:54 ./usr/share/doc/libgetoptions-dev/copyright libgetoptions0-dbgsym_3.10.0+dfsg-1_amd64.deb --------------------------------------------- new Debian package, version 2.0. size 8792 bytes: control archive=560 bytes. 428 bytes, 13 lines control 106 bytes, 1 lines md5sums Package: libgetoptions0-dbgsym Source: cod-tools Version: 3.10.0+dfsg-1 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian Science Maintainers Installed-Size: 22 Depends: libgetoptions0 (= 3.10.0+dfsg-1) Section: debug Priority: optional Multi-Arch: same Description: debug symbols for libgetoptions0 Build-Ids: 8868ad003e70f35014519c6420fc7267e20472ed drwxr-xr-x root/root 0 2024-05-30 05:59 ./ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/debug/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/debug/.build-id/88/ -rw-r--r-- root/root 11704 2024-05-30 05:59 ./usr/lib/debug/.build-id/88/68ad003e70f35014519c6420fc7267e20472ed.debug drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/doc/ lrwxrwxrwx root/root 0 2024-05-30 05:59 ./usr/share/doc/libgetoptions0-dbgsym -> libgetoptions0 libgetoptions0_3.10.0+dfsg-1_amd64.deb -------------------------------------- new Debian package, version 2.0. size 37752 bytes: control archive=952 bytes. 649 bytes, 16 lines control 313 bytes, 4 lines md5sums 48 bytes, 1 lines shlibs 66 bytes, 2 lines symbols 68 bytes, 2 lines triggers Package: libgetoptions0 Source: cod-tools Version: 3.10.0+dfsg-1 Architecture: amd64 Maintainer: Debian Science Maintainers Installed-Size: 60 Depends: libcexceptions0 (>= 3.10.0+dfsg-1), libc6 (>= 2.7) Section: libs Priority: optional Multi-Arch: same Homepage: https://wiki.crystallography.net/cod-tools Description: Command line argument processing library for C C library for processing GNU-like command line options. The library uses C the exception handling library and is used for developing programs using codcif, an error-correcting Crystallographic Information Format (CIF) parser. drwxr-xr-x root/root 0 2024-05-30 05:59 ./ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/x86_64-linux-gnu/ lrwxrwxrwx root/root 0 2024-05-30 05:59 ./usr/lib/x86_64-linux-gnu/libgetoptions.so.0 -> libgetoptions.so.0.01 -rw-r--r-- root/root 14176 2024-05-30 05:59 ./usr/lib/x86_64-linux-gnu/libgetoptions.so.0.01 drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/doc/libgetoptions0/ -rw-r--r-- root/root 2133 2024-05-30 05:59 ./usr/share/doc/libgetoptions0/changelog.Debian.gz -rw-r--r-- root/root 28944 2024-05-24 11:43 ./usr/share/doc/libgetoptions0/changelog.gz -rw-r--r-- root/root 1904 2024-05-30 05:54 ./usr/share/doc/libgetoptions0/copyright python3-pycodcif-dbgsym_3.10.0+dfsg-1_amd64.deb ----------------------------------------------- new Debian package, version 2.0. size 287240 bytes: control archive=656 bytes. 459 bytes, 12 lines control 305 bytes, 3 lines md5sums Package: python3-pycodcif-dbgsym Source: cod-tools Version: 3.10.0+dfsg-1 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian Science Maintainers Installed-Size: 340 Depends: python3-pycodcif (= 3.10.0+dfsg-1) Section: debug Priority: optional Description: debug symbols for python3-pycodcif Build-Ids: 9e35a176df80bc4ba45997621732ae48706b1f3f d5601595d073c7eb5e72772dd6ad6bc68a58fcb5 drwxr-xr-x root/root 0 2024-05-30 05:59 ./ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/debug/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/debug/.build-id/9e/ -rw-r--r-- root/root 157928 2024-05-30 05:59 ./usr/lib/debug/.build-id/9e/35a176df80bc4ba45997621732ae48706b1f3f.debug drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/debug/.build-id/d5/ -rw-r--r-- root/root 159520 2024-05-30 05:59 ./usr/lib/debug/.build-id/d5/601595d073c7eb5e72772dd6ad6bc68a58fcb5.debug drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/debug/.dwz/x86_64-linux-gnu/ -rw-r--r-- root/root 15912 2024-05-30 05:59 ./usr/lib/debug/.dwz/x86_64-linux-gnu/python3-pycodcif.debug drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/doc/ lrwxrwxrwx root/root 0 2024-05-30 05:59 ./usr/share/doc/python3-pycodcif-dbgsym -> python3-pycodcif python3-pycodcif_3.10.0+dfsg-1_amd64.deb ---------------------------------------- new Debian package, version 2.0. size 103080 bytes: control archive=1376 bytes. 762 bytes, 18 lines control 949 bytes, 10 lines md5sums 279 bytes, 12 lines * postinst #!/bin/sh 392 bytes, 12 lines * prerm #!/bin/sh Package: python3-pycodcif Source: cod-tools Version: 3.10.0+dfsg-1 Architecture: amd64 Maintainer: Debian Science Maintainers Installed-Size: 364 Depends: python3 (<< 3.13), python3 (>= 3.11~), python3:any, libc6 (>= 2.22) Section: python Priority: optional Homepage: https://wiki.crystallography.net/cod-tools Description: error-correcting CIF parser - Python3 bindings Python bindings for Crystallographic Information Format (CIF) v1.1 and v2.0 parser, which is written in C language, and developed by the Crystallography Open Database. A CIF format file is represented by a list of data blocks, where each data block is represented by a dictionary. . This package installs the library for Python 3. drwxr-xr-x root/root 0 2024-05-30 05:59 ./ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/python3/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/python3/dist-packages/pycodcif-3.10.0.egg-info/ -rw-r--r-- root/root 3789 2024-05-30 05:59 ./usr/lib/python3/dist-packages/pycodcif-3.10.0.egg-info/PKG-INFO -rw-r--r-- root/root 1 2024-05-30 05:59 ./usr/lib/python3/dist-packages/pycodcif-3.10.0.egg-info/dependency_links.txt -rw-r--r-- root/root 9 2024-05-30 05:59 ./usr/lib/python3/dist-packages/pycodcif-3.10.0.egg-info/top_level.txt drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/lib/python3/dist-packages/pycodcif/ -rw-r--r-- root/root 530 2017-11-16 11:15 ./usr/lib/python3/dist-packages/pycodcif/__init__.py -rw-r--r-- root/root 148528 2024-05-30 05:59 ./usr/lib/python3/dist-packages/pycodcif/_pycodcif.cpython-311-x86_64-linux-gnu.so -rw-r--r-- root/root 148528 2024-05-30 05:59 ./usr/lib/python3/dist-packages/pycodcif/_pycodcif.cpython-312-x86_64-linux-gnu.so -rw-r--r-- root/root 18109 2024-05-30 05:59 ./usr/lib/python3/dist-packages/pycodcif/pycodcif.py drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-05-30 05:59 ./usr/share/doc/python3-pycodcif/ -rw-r--r-- root/root 2131 2024-05-30 05:59 ./usr/share/doc/python3-pycodcif/changelog.Debian.gz -rw-r--r-- root/root 28944 2024-05-24 11:43 ./usr/share/doc/python3-pycodcif/changelog.gz -rw-r--r-- root/root 1904 2024-05-30 05:54 ./usr/share/doc/python3-pycodcif/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: full Build-Space: 215672 Build-Time: 1311 Distribution: sid Host Architecture: amd64 Install-Time: 31 Job: /srv/debomatic/incoming/cod-tools_3.10.0+dfsg-1.dsc Machine Architecture: amd64 Package: cod-tools Package-Time: 1355 Source-Version: 3.10.0+dfsg-1 Space: 215672 Status: successful Version: 3.10.0+dfsg-1 -------------------------------------------------------------------------------- Finished at 2024-06-02T15:19:45Z Build needed 00:22:35, 215672k disk space