sbuild (Debian sbuild) 0.91.9 (05 May 2026) on carme.larted.org.uk +==============================================================================+ | minc-tools 2.3.00+dfsg-17 (amd64) Mon, 29 Jun 2026 08:19:01 +0000 | +==============================================================================+ Package: minc-tools Version: 2.3.00+dfsg-17 Source Version: 2.3.00+dfsg-17 Distribution: perl-5.44-throwaway Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: full I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... +------------------------------------------------------------------------------+ | Chroot Setup Commands Mon, 29 Jun 2026 08:19:03 +0000 | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup minc-tools_2.3.00+dfsg-17 perl-5.44-throwaway amd64 -------------------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup minc-tools_2.3.00+dfsg-17 perl-5.44-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- I: Setting up apt archive... +------------------------------------------------------------------------------+ | Update chroot Mon, 29 Jun 2026 08:19:03 +0000 | +------------------------------------------------------------------------------+ Get:1 file:/srv/reprepro perl-5.44 InRelease [3039 B] Hit:2 http://deb.debian.org/debian unstable InRelease Get:1 file:/srv/reprepro perl-5.44 InRelease [3039 B] Hit:3 http://deb.debian.org/debian sid InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files Mon, 29 Jun 2026 08:19:05 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/debomatic/incoming/minc-tools_2.3.00+dfsg-17.dsc exists in /srv/debomatic/incoming; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Mon, 29 Jun 2026 08:19:06 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), cmake, bison, flex, libminc-dev, libhdf5-dev, libnifti2-dev, libnetcdf-dev, zlib1g-dev, texlive-latex-base, debhelper, build-essential Filtered Build-Depends: debhelper-compat (= 13), cmake, bison, flex, libminc-dev, libhdf5-dev, libnifti2-dev, libnetcdf-dev, zlib1g-dev, texlive-latex-base, debhelper, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/minc-tools-dzBsiR/resolver-Gf3Hki/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/build/minc-tools-dzBsiR/resolver-Gf3Hki/apt_archive ./ InRelease Get:2 copy:/build/minc-tools-dzBsiR/resolver-Gf3Hki/apt_archive ./ Release [609 B] Ign:3 copy:/build/minc-tools-dzBsiR/resolver-Gf3Hki/apt_archive ./ Release.gpg Get:4 copy:/build/minc-tools-dzBsiR/resolver-Gf3Hki/apt_archive ./ Sources [719 B] Get:5 copy:/build/minc-tools-dzBsiR/resolver-Gf3Hki/apt_archive ./ Packages [758 B] Fetched 2086 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following additional packages will be installed: autoconf automake autopoint autotools-dev bison bsdextrautils cmake comerr-dev debhelper dh-autoreconf dh-strip-nondeterminism dwz file flex fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lmodern gettext gettext-base groff-base hdf5-helpers intltool-debian krb5-multidev libaec-dev libaec0 libarchive-zip-perl libarchive13t64 libbrotli-dev libbrotli1 libcairo2 libcom-err2 libcurl3t64-gnutls libcurl4-gnutls libcurl4-openssl-dev libcurl4t64 libdebhelper-perl libelf1t64 libevent-2.1-7t64 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgfortran5 libglib2.0-0t64 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 libgnutls28-dev libgraphite2-3 libgssapi-krb5-2 libgssrpc4t64 libharfbuzz-subset0 libharfbuzz0b libhdf5-310 libhdf5-cpp-310 libhdf5-dev libhdf5-fortran-310 libhdf5-hl-310 libhdf5-hl-cpp-310 libhdf5-hl-fortran-310 libice6 libicu78 libidn2-dev libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjsoncpp26 libk5crypto3 libkadm5clnt-mit12 libkadm5srv-mit12 libkdb5-10t64 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5-dev libkrb5support0 libldap-dev liblzma-dev libmagic-mgc libmagic1t64 libminc-dev libminc2-5.3.0t64 libmpfi0 libnetcdf-dev libnetcdf22 libnghttp2-14 libnghttp2-dev libnghttp3-9 libnghttp3-dev libngtcp2-16 libngtcp2-crypto-gnutls8 libngtcp2-crypto-ossl-dev libngtcp2-crypto-ossl0 libngtcp2-dev libnifti2-2 libnifti2-dev libnifticdf-dev libnifticdf2 libniftiio-dev libniftiio2t64 libp11-kit-dev libpaper-utils libpaper2 libpipeline1 libpixman-1-0 libpkgconf7 libpng16-16t64 libpotrace0 libproc2-0 libpsl-dev libpsl5t64 libptexenc1 librhash1 librtmp-dev librtmp1 libsm6 libssh2-1-dev libssh2-1t64 libssl-dev libsynctex2 libsz2 libtasn1-6-dev libteckit0 libtexlua53-5 libtext-charwidth-perl libtext-wrapi18n-perl libtool libuchardet0 libunbound8 libunistring-dev libuv1t64 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2-16 libxml2-dev libxmu6 libxpm4 libxrender1 libxt6t64 libznz-dev libznz3 libzstd-dev libzzip-0-13t64 m4 man-db nettle-dev pkgconf pkgconf-bin po-debconf procps sensible-utils t1utils tex-common texlive-base texlive-binaries texlive-latex-base ucf x11-common xdg-utils zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc bison-doc cmake-doc cmake-format elpa-cmake-mode ninja-build doc-base dh-make flex-doc gettext-doc libasprintf-dev libgettextpo-dev gnulib-l10n groff krb5-doc lrzip libcurl4-doc libidn-dev low-memory-monitor gmp-doc libgmp10-doc libmpfr-dev dns-root-data gnutls-bin gnutls-doc krb5-user libhdf5-doc liblzma-doc libmpfi-doc netcdf-bin netcdf-doc libnghttp2-doc p11-kit-doc libssl-doc libtool-doc gfortran | fortran95-compiler m4-doc apparmor less www-browser libmail-box-perl ghostscript gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec texlive-binaries-sse2 hintview texlive-latex-base-doc wp2latex Recommended packages: libfl-dev curl | wget | lynx python3:any ca-certificates libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales publicsuffix libtasn1-doc libltdl-dev libmail-sendmail-perl psmisc linux-sysctl-defaults lmodern dvisvgm libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autopoint autotools-dev bison bsdextrautils cmake comerr-dev debhelper dh-autoreconf dh-strip-nondeterminism dwz file flex fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lmodern gettext gettext-base groff-base hdf5-helpers intltool-debian krb5-multidev libaec-dev libaec0 libarchive-zip-perl libarchive13t64 libbrotli-dev libbrotli1 libcairo2 libcom-err2 libcurl3t64-gnutls libcurl4-gnutls libcurl4-openssl-dev libcurl4t64 libdebhelper-perl libelf1t64 libevent-2.1-7t64 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgfortran5 libglib2.0-0t64 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 libgnutls28-dev libgraphite2-3 libgssapi-krb5-2 libgssrpc4t64 libharfbuzz-subset0 libharfbuzz0b libhdf5-310 libhdf5-cpp-310 libhdf5-dev libhdf5-fortran-310 libhdf5-hl-310 libhdf5-hl-cpp-310 libhdf5-hl-fortran-310 libice6 libicu78 libidn2-dev libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjsoncpp26 libk5crypto3 libkadm5clnt-mit12 libkadm5srv-mit12 libkdb5-10t64 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5-dev libkrb5support0 libldap-dev liblzma-dev libmagic-mgc libmagic1t64 libminc-dev libminc2-5.3.0t64 libmpfi0 libnetcdf-dev libnetcdf22 libnghttp2-14 libnghttp2-dev libnghttp3-9 libnghttp3-dev libngtcp2-16 libngtcp2-crypto-gnutls8 libngtcp2-crypto-ossl-dev libngtcp2-crypto-ossl0 libngtcp2-dev libnifti2-2 libnifti2-dev libnifticdf-dev libnifticdf2 libniftiio-dev libniftiio2t64 libp11-kit-dev libpaper-utils libpaper2 libpipeline1 libpixman-1-0 libpkgconf7 libpng16-16t64 libpotrace0 libproc2-0 libpsl-dev libpsl5t64 libptexenc1 librhash1 librtmp-dev librtmp1 libsm6 libssh2-1-dev libssh2-1t64 libssl-dev libsynctex2 libsz2 libtasn1-6-dev libteckit0 libtexlua53-5 libtext-charwidth-perl libtext-wrapi18n-perl libtool libuchardet0 libunbound8 libunistring-dev libuv1t64 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2-16 libxml2-dev libxmu6 libxpm4 libxrender1 libxt6t64 libznz-dev libznz3 libzstd-dev libzzip-0-13t64 m4 man-db nettle-dev pkgconf pkgconf-bin po-debconf procps sbuild-build-depends-main-dummy sensible-utils t1utils tex-common texlive-base texlive-binaries texlive-latex-base ucf x11-common xdg-utils zlib1g-dev 0 upgraded, 170 newly installed, 0 to remove and 0 not upgraded. Need to get 114 MB/115 MB of archives. After this operation, 398 MB of additional disk space will be used. Get:1 copy:/build/minc-tools-dzBsiR/resolver-Gf3Hki/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [920 B] Get:2 file:/srv/reprepro perl-5.44/main amd64 libtext-charwidth-perl amd64 0.04-12+b1 [9324 B] Get:3 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.21-1 [332 kB] Get:4 file:/srv/reprepro perl-5.44/main amd64 libldap-dev amd64 2.6.13+dfsg-1+b1 [308 kB] Get:5 http://deb.debian.org/debian unstable/main amd64 flex amd64 2.6.4-8.2+b5 [425 kB] Get:6 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.8.2-1 [121 kB] Get:7 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-9+b2 [63.8 kB] Get:8 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-9+b2 [880 kB] Get:9 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get:10 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.47-4 [345 kB] Get:11 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.47-4 [111 kB] Get:12 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.47-4 [43.0 kB] Get:13 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 1.0-1 [332 kB] Get:14 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-2+b2 [69.0 kB] Get:15 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.24.1-1 [1336 kB] Get:16 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.42.2-1 [100.0 kB] Get:17 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-3 [49.2 kB] Get:18 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get:19 http://deb.debian.org/debian unstable/main amd64 libtext-wrapi18n-perl all 0.06-11 [7788 B] Get:20 http://deb.debian.org/debian unstable/main amd64 ucf all 3.0056 [47.1 kB] Get:21 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.73-2 [516 kB] Get:22 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20240727.1+nmu1 [60.0 kB] Get:23 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.18.1-4 [877 kB] Get:24 http://deb.debian.org/debian unstable/main amd64 autopoint all 1.0-1 [820 kB] Get:25 http://deb.debian.org/debian unstable/main amd64 bison amd64 2:3.8.2+dfsg-1+b3 [1170 kB] Get:26 http://deb.debian.org/debian unstable/main amd64 libxml2-16 amd64 2.15.3+dfsg-1 [642 kB] Get:27 http://deb.debian.org/debian unstable/main amd64 libarchive13t64 amd64 3.8.7-1 [361 kB] Get:28 http://deb.debian.org/debian unstable/main amd64 libnghttp3-9 amd64 1.15.0-1 [67.2 kB] Get:29 http://deb.debian.org/debian unstable/main amd64 libngtcp2-16 amd64 1.22.1-1 [133 kB] Get:30 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.2.0-3 [320 kB] Get:31 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.22.1-3 [31.1 kB] Get:32 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.4-1 [19.2 kB] Get:33 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.22.1-3 [79.0 kB] Get:34 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-6+b2 [9348 B] Get:35 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.22.1-3 [335 kB] Get:36 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.22.1-3 [137 kB] Get:37 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.69.0-1 [89.0 kB] Get:38 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-ossl0 amd64 1.22.1-1 [23.3 kB] Get:39 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.22.0-1 [60.7 kB] Get:40 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-4 [244 kB] Get:41 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.21.0-2 [422 kB] Get:42 http://deb.debian.org/debian unstable/main amd64 libjsoncpp26 amd64 1.9.7-4 [86.8 kB] Get:43 http://deb.debian.org/debian unstable/main amd64 librhash1 amd64 1.4.6-1.1+b1 [135 kB] Get:44 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.52.1-4 [158 kB] Get:45 http://deb.debian.org/debian unstable/main amd64 cmake amd64 4.3.4-1 [16.2 MB] Get:46 http://deb.debian.org/debian unstable/main amd64 comerr-dev amd64 2.1-1.47.4-1 [50.9 kB] Get:47 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 14.2 [77.1 kB] Get:48 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-11 [539 kB] Get:49 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 22 [12.2 kB] Get:50 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:51 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.15.1-1 [17.1 kB] Get:52 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.15.1-1 [6020 B] Get:53 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.195-1 [58.1 kB] Get:54 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.16-4 [108 kB] Get:55 http://deb.debian.org/debian unstable/main amd64 gettext amd64 1.0-1 [2660 kB] Get:56 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:57 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.22 [216 kB] Get:58 http://deb.debian.org/debian unstable/main amd64 debhelper all 14.2 [933 kB] Get:59 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-9 [488 kB] Get:60 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-9 [840 kB] Get:61 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.17.1-5 [56.1 kB] Get:62 http://deb.debian.org/debian unstable/main amd64 fonts-lmodern all 2.005-2 [4533 kB] Get:63 http://deb.debian.org/debian unstable/main amd64 hdf5-helpers amd64 1.14.6+repack-2+b1 [20.6 kB] Get:64 http://deb.debian.org/debian unstable/main amd64 libgssrpc4t64 amd64 1.22.1-3 [58.3 kB] Get:65 http://deb.debian.org/debian unstable/main amd64 libkadm5clnt-mit12 amd64 1.22.1-3 [40.3 kB] Get:66 http://deb.debian.org/debian unstable/main amd64 libkdb5-10t64 amd64 1.22.1-3 [41.3 kB] Get:67 http://deb.debian.org/debian unstable/main amd64 libkadm5srv-mit12 amd64 1.22.1-3 [54.1 kB] Get:68 http://deb.debian.org/debian unstable/main amd64 krb5-multidev amd64 1.22.1-3 [125 kB] Get:69 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.7-1 [22.3 kB] Get:70 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.7-1 [18.7 kB] Get:71 http://deb.debian.org/debian unstable/main amd64 libaec-dev amd64 1.1.7-1 [25.2 kB] Get:72 http://deb.debian.org/debian unstable/main amd64 libbrotli-dev amd64 1.2.0-3 [324 kB] Get:73 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.58-1 [289 kB] Get:74 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.14.3+dfsg-1 [493 kB] Get:75 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.17.1-5 [132 kB] Get:76 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.46.4-1+b2 [259 kB] Get:77 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1+b2 [20.7 kB] Get:78 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-2+b1 [28.2 kB] Get:79 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b2 [144 kB] Get:80 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.13-1 [346 kB] Get:81 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.13-1 [829 kB] Get:82 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b2 [115 kB] Get:83 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b2 [105 kB] Get:84 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b4 [50.7 kB] Get:85 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.12-1+b2 [27.7 kB] Get:86 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.4-3+b1 [543 kB] Get:87 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.22.1-1 [20.8 kB] Get:88 http://deb.debian.org/debian unstable/main amd64 libcurl4-gnutls amd64 8.21.0-2 [416 kB] Get:89 http://deb.debian.org/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.21.0-2 [17.0 kB] Get:90 http://deb.debian.org/debian unstable/main amd64 libidn2-dev amd64 2.3.8-5 [102 kB] Get:91 http://deb.debian.org/debian unstable/main amd64 libkrb5-dev amd64 1.22.1-3 [14.0 kB] Get:92 http://deb.debian.org/debian unstable/main amd64 libpkgconf7 amd64 2.5.1-4 [47.8 kB] Get:93 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 2.5.1-4 [35.9 kB] Get:94 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 2.5.1-4 [33.6 kB] Get:95 http://deb.debian.org/debian unstable/main amd64 libnghttp2-dev amd64 1.69.0-1 [128 kB] Get:96 http://deb.debian.org/debian unstable/main amd64 libnghttp3-dev amd64 1.15.0-1 [94.5 kB] Get:97 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-ossl-dev amd64 1.22.1-1 [24.2 kB] Get:98 http://deb.debian.org/debian unstable/main amd64 libngtcp2-dev amd64 1.22.1-1 [192 kB] Get:99 http://deb.debian.org/debian unstable/main amd64 libunistring-dev amd64 1.4.2-1 [651 kB] Get:100 http://deb.debian.org/debian unstable/main amd64 libpsl-dev amd64 0.22.0-1 [29.8 kB] Get:101 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.6-1 [60.3 kB] Get:102 http://deb.debian.org/debian unstable/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-5+b2 [328 kB] Get:103 http://deb.debian.org/debian unstable/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-5+b2 [641 kB] Get:104 http://deb.debian.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10+b2 [184 kB] Get:105 http://deb.debian.org/debian unstable/main amd64 libunbound8 amd64 1.25.1-1+b1 [619 kB] Get:106 http://deb.debian.org/debian unstable/main amd64 libgnutls-dane0t64 amd64 3.8.13-1 [496 kB] Get:107 http://deb.debian.org/debian unstable/main amd64 libp11-kit-dev amd64 0.26.2-3 [222 kB] Get:108 http://deb.debian.org/debian unstable/main amd64 libtasn1-6-dev amd64 4.21.0-2+b1 [98.6 kB] Get:109 http://deb.debian.org/debian unstable/main amd64 nettle-dev amd64 3.10.2-1+b1 [1321 kB] Get:110 http://deb.debian.org/debian unstable/main amd64 libgnutls28-dev amd64 3.8.13-1 [1479 kB] Get:111 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.2-3 [918 kB] Get:112 http://deb.debian.org/debian unstable/main amd64 librtmp-dev amd64 2.6-1 [69.7 kB] Get:113 http://deb.debian.org/debian unstable/main amd64 libssl-dev amd64 3.6.3-1 [3025 kB] Get:114 http://deb.debian.org/debian unstable/main amd64 libssh2-1-dev amd64 1.11.1-4 [393 kB] Get:115 http://deb.debian.org/debian unstable/main amd64 libzstd-dev amd64 1.5.7+dfsg-3+b2 [372 kB] Get:116 http://deb.debian.org/debian unstable/main amd64 libcurl4-openssl-dev amd64 8.21.0-2 [550 kB] Get:117 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 16.1.0-2 [877 kB] Get:118 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.88.2-1 [1536 kB] Get:119 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.15-2 [75.8 kB] Get:120 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 12.3.2-2+b2 [513 kB] Get:121 http://deb.debian.org/debian unstable/main amd64 libharfbuzz-subset0 amd64 12.3.2-2+b2 [574 kB] Get:122 http://deb.debian.org/debian unstable/main amd64 libhdf5-310 amd64 1.14.6+repack-2+b1 [1357 kB] Get:123 http://deb.debian.org/debian unstable/main amd64 libhdf5-cpp-310 amd64 1.14.6+repack-2+b1 [130 kB] Get:124 http://deb.debian.org/debian unstable/main amd64 libhdf5-fortran-310 amd64 1.14.6+repack-2+b1 [107 kB] Get:125 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-310 amd64 1.14.6+repack-2+b1 [63.3 kB] Get:126 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-fortran-310 amd64 1.14.6+repack-2+b1 [38.1 kB] Get:127 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-cpp-310 amd64 1.14.6+repack-2+b1 [18.5 kB] Get:128 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:3.1.3-4 [213 kB] Get:129 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:3.1.3-4 [356 kB] Get:130 http://deb.debian.org/debian unstable/main amd64 libjpeg-dev amd64 1:3.1.3-4 [78.8 kB] Get:131 http://deb.debian.org/debian unstable/main amd64 libhdf5-dev amd64 1.14.6+repack-2+b1 [3196 kB] Get:132 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+26 [217 kB] Get:133 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.1.1-1+b2 [66.8 kB] Get:134 http://deb.debian.org/debian unstable/main amd64 libicu78 amd64 78.3-2 [10.0 MB] Get:135 http://deb.debian.org/debian unstable/main amd64 libkpathsea6 amd64 2026.20260303.78225+ds-4 [158 kB] Get:136 http://deb.debian.org/debian unstable/main amd64 liblzma-dev amd64 5.8.3-1 [369 kB] Get:137 http://deb.debian.org/debian unstable/main amd64 libnetcdf22 amd64 1:4.10.0-1 [526 kB] Get:138 http://deb.debian.org/debian unstable/main amd64 libminc2-5.3.0t64 amd64 2.5.0-2 [242 kB] Get:139 http://deb.debian.org/debian unstable/main amd64 libxml2-dev amd64 2.15.3+dfsg-1 [746 kB] Get:140 http://deb.debian.org/debian unstable/main amd64 libnetcdf-dev amd64 1:4.10.0-1 [122 kB] Get:141 http://deb.debian.org/debian unstable/main amd64 libminc-dev amd64 2.5.0-2 [71.9 kB] Get:142 http://deb.debian.org/debian unstable/main amd64 libmpfi0 amd64 1.5.4+ds-5 [36.0 kB] Get:143 http://deb.debian.org/debian unstable/main amd64 libznz3 amd64 3.0.1-9.1+b2 [10.4 kB] Get:144 http://deb.debian.org/debian unstable/main amd64 libnifti2-2 amd64 3.0.1-9.1+b2 [76.8 kB] Get:145 http://deb.debian.org/debian unstable/main amd64 libnifticdf2 amd64 3.0.1-9.1+b2 [53.6 kB] Get:146 http://deb.debian.org/debian unstable/main amd64 libnifticdf-dev amd64 3.0.1-9.1+b2 [59.4 kB] Get:147 http://deb.debian.org/debian unstable/main amd64 libniftiio2t64 amd64 3.0.1-9.1+b2 [59.4 kB] Get:148 http://deb.debian.org/debian unstable/main amd64 libniftiio-dev amd64 3.0.1-9.1+b2 [68.8 kB] Get:149 http://deb.debian.org/debian unstable/main amd64 libznz-dev amd64 3.0.1-9.1+b2 [10.8 kB] Get:150 http://deb.debian.org/debian unstable/main amd64 libnifti2-dev amd64 3.0.1-9.1+b2 [95.7 kB] Get:151 http://deb.debian.org/debian unstable/main amd64 libpaper2 amd64 2.2.5-0.4 [16.6 kB] Get:152 http://deb.debian.org/debian unstable/main amd64 libpaper-utils amd64 2.2.5-0.4 [15.8 kB] Get:153 http://deb.debian.org/debian unstable/main amd64 libpotrace0 amd64 1.16-2+b3 [25.5 kB] Get:154 http://deb.debian.org/debian unstable/main amd64 libptexenc1 amd64 2026.20260303.78225+ds-4 [51.7 kB] Get:155 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.6-1+b2 [37.9 kB] Get:156 http://deb.debian.org/debian unstable/main amd64 libsynctex2 amd64 2026.20260303.78225+ds-4 [63.2 kB] Get:157 http://deb.debian.org/debian unstable/main amd64 libteckit0 amd64 2.5.13+ds-2 [370 kB] Get:158 http://deb.debian.org/debian unstable/main amd64 libtexlua53-5 amd64 2026.20260303.78225+ds-4 [113 kB] Get:159 http://deb.debian.org/debian unstable/main amd64 libxt6t64 amd64 1:1.2.1-1.3+b2 [191 kB] Get:160 http://deb.debian.org/debian unstable/main amd64 libxmu6 amd64 2:1.1.3-4+b1 [59.6 kB] Get:161 http://deb.debian.org/debian unstable/main amd64 libxpm4 amd64 1:3.5.19-1 [58.9 kB] Get:162 http://deb.debian.org/debian unstable/main amd64 libxaw7 amd64 2:1.0.16-1+b2 [214 kB] Get:163 http://deb.debian.org/debian unstable/main amd64 libxi6 amd64 2:1.8.2-2+b1 [79.9 kB] Get:164 http://deb.debian.org/debian unstable/main amd64 libzzip-0-13t64 amd64 0.13.78+dfsg.1-0.2+b1 [58.9 kB] Get:165 http://deb.debian.org/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:166 http://deb.debian.org/debian unstable/main amd64 tex-common all 6.20 [29.7 kB] Get:167 http://deb.debian.org/debian unstable/main amd64 texlive-binaries amd64 2026.20260303.78225+ds-4 [9244 kB] Get:168 http://deb.debian.org/debian unstable/main amd64 xdg-utils all 1.2.1-2 [75.8 kB] Get:169 http://deb.debian.org/debian unstable/main amd64 texlive-base all 2026.20260527-3 [23.9 MB] Get:170 http://deb.debian.org/debian unstable/main amd64 texlive-latex-base all 2026.20260527-3 [1437 kB] Preconfiguring packages ... Fetched 114 MB in 1s (172 MB/s) Selecting previously unselected package m4. (Reading database ... 14525 files and directories currently installed.) Preparing to unpack .../000-m4_1.4.21-1_amd64.deb ... Unpacking m4 (1.4.21-1) ... Selecting previously unselected package flex. Preparing to unpack .../001-flex_2.6.4-8.2+b5_amd64.deb ... Unpacking flex (2.6.4-8.2+b5) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../002-libexpat1_2.8.2-1_amd64.deb ... Unpacking libexpat1:amd64 (2.8.2-1) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../003-libproc2-0_2%3a4.0.4-9+b2_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-9+b2) ... Selecting previously unselected package procps. Preparing to unpack .../004-procps_2%3a4.0.4-9+b2_amd64.deb ... Unpacking procps (2:4.0.4-9+b2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../005-sensible-utils_0.0.26_all.deb ... 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Setting up libgssapi-krb5-2:amd64 (1.22.1-3) ... Setting up ucf (3.0056) ... Setting up libssh2-1-dev:amd64 (1.11.1-4) ... Setting up libngtcp2-crypto-ossl0:amd64 (1.22.1-1) ... Setting up libngtcp2-crypto-ossl-dev:amd64 (1.22.1-1) ... Setting up dh-strip-nondeterminism (1.15.1-1) ... Setting up groff-base (1.24.1-1) ... Setting up libharfbuzz0b:amd64 (12.3.2-2+b2) ... Setting up libnifti2-dev (3.0.1-9.1+b2) ... Setting up libfontconfig1:amd64 (2.17.1-5) ... Setting up libsm6:amd64 (2:1.2.6-1+b2) ... Setting up libgnutls28-dev:amd64 (3.8.13-1) ... Setting up libcurl4-gnutls:amd64 (8.21.0-2) ... Setting up libnghttp2-dev:amd64 (1.69.0-1) ... Setting up libxi6:amd64 (2:1.8.2-2+b1) ... Setting up libcurl4t64:amd64 (8.21.0-2) ... Setting up po-debconf (1.0.22) ... Setting up libcurl3t64-gnutls:amd64 (8.21.0-2) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:amd64 (1.18.4-3+b1) ... Setting up tex-common (6.20) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libgssrpc4t64:amd64 (1.22.1-3) ... Setting up libxt6t64:amd64 (1:1.2.1-1.3+b2) ... Setting up librtmp-dev:amd64 (2.6-1) ... Setting up libhdf5-310:amd64 (1.14.6+repack-2+b1) ... Setting up libharfbuzz-subset0:amd64 (12.3.2-2+b2) ... Setting up cmake (4.3.4-1) ... Setting up libhdf5-fortran-310:amd64 (1.14.6+repack-2+b1) ... Setting up libkadm5clnt-mit12:amd64 (1.22.1-3) ... Setting up libhdf5-cpp-310:amd64 (1.14.6+repack-2+b1) ... Setting up libhdf5-hl-310:amd64 (1.14.6+repack-2+b1) ... Setting up libxmu6:amd64 (2:1.1.3-4+b1) ... Setting up libkdb5-10t64:amd64 (1.22.1-3) ... Setting up libnetcdf22:amd64 (1:4.10.0-1) ... Setting up debhelper (14.2) ... Setting up libxaw7:amd64 (2:1.0.16-1+b2) ... Setting up texlive-binaries (2026.20260303.78225+ds-4) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up libkadm5srv-mit12:amd64 (1.22.1-3) ... Setting up texlive-base (2026.20260527-3) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex Setting up libminc2-5.3.0t64:amd64 (2.5.0-2) ... Setting up krb5-multidev:amd64 (1.22.1-3) ... Setting up libhdf5-hl-cpp-310:amd64 (1.14.6+repack-2+b1) ... Setting up libhdf5-hl-fortran-310:amd64 (1.14.6+repack-2+b1) ... Setting up libkrb5-dev:amd64 (1.22.1-3) ... Setting up texlive-latex-base (2026.20260527-3) ... Setting up libcurl4-openssl-dev:amd64 (8.21.0-2) ... Setting up libhdf5-dev (1.14.6+repack-2+b1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libnetcdf-dev (1:4.10.0-1) ... Setting up libminc-dev:amd64 (2.5.0-2) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.42-17) ... Processing triggers for tex-common (6.20) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. +------------------------------------------------------------------------------+ | Check architectures Mon, 29 Jun 2026 08:19:49 +0000 | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any) +------------------------------------------------------------------------------+ | Build environment Mon, 29 Jun 2026 08:19:50 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 7.0.10+deb14-amd64 #1 SMP PREEMPT_DYNAMIC Debian 7.0.10-1 (2026-05-27) amd64 (x86_64) Toolchain package versions: binutils_2.46.50.20260617-1 dpkg-dev_1.23.7 g++-15_15.3.0-1 gcc-15_15.3.0-1 libc6-dev_2.42-17 libstdc++-15-dev_15.3.0-1 libstdc++6_16.1.0-2 linux-libc-dev_7.0.13-1 Package versions: apt_3.3.1 autoconf_2.73-2 automake_1:1.18.1-4 autopoint_1.0-1 autotools-dev_20240727.1+nmu1 base-files_14.2 base-passwd_3.6.8 bash_5.3-3 binutils_2.46.50.20260617-1 binutils-common_2.46.50.20260617-1 binutils-x86-64-linux-gnu_2.46.50.20260617-1 bison_2:3.8.2+dfsg-1+b3 bsdextrautils_2.42.2-1 build-essential_12.12 bzip2_1.0.8-6+b2 cmake_4.3.4-1 comerr-dev_2.1-1.47.4-1 coreutils_9.10-1 cpp_4:15.2.0-5+b1 cpp-15_15.3.0-1 cpp-15-x86-64-linux-gnu_15.3.0-1 cpp-x86-64-linux-gnu_4:15.2.0-5+b1 dash_0.5.12-12 debconf_1.5.92 debhelper_14.2 debian-archive-keyring_2025.1 debianutils_5.23.2 dh-autoreconf_22 dh-strip-nondeterminism_1.15.1-1 diffutils_1:3.12-1 dirmngr_2.4.9-5 dpkg_1.23.7 dpkg-dev_1.23.7 dwz_0.16-4 eatmydata_131-2 file_1:5.47-4 findutils_4.10.0-4 flex_2.6.4-8.2+b5 fontconfig-config_2.17.1-5 fonts-dejavu-core_2.37-9 fonts-dejavu-mono_2.37-9 fonts-lmodern_2.005-2 g++_4:15.2.0-5+b1 g++-15_15.3.0-1 g++-15-x86-64-linux-gnu_15.3.0-1 g++-x86-64-linux-gnu_4:15.2.0-5+b1 gcc_4:15.2.0-5+b1 gcc-15_15.3.0-1 gcc-15-base_15.3.0-1 gcc-15-x86-64-linux-gnu_15.3.0-1 gcc-16-base_16.1.0-2 gcc-x86-64-linux-gnu_4:15.2.0-5+b1 gettext_1.0-1 gettext-base_1.0-1 gnupg_2.4.9-5 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libdb5.3t64_5.3.28+dfsg2-11+b1 libdebconfclient0_0.283 libdebhelper-perl_14.2 libdpkg-perl_1.23.7 libeatmydata1_131-2+b2 libelf1t64_0.195-1 libevent-2.1-7t64_2.1.12-stable-10+b2 libexpat1_2.8.2-1 libffi8_3.5.2-4 libfile-stripnondeterminism-perl_1.15.1-1 libfontconfig1_2.17.1-5 libfreetype6_2.14.3+dfsg-1 libgcc-15-dev_15.3.0-1 libgcc-s1_16.1.0-2 libgcrypt20_1.12.2-1 libgdbm-compat4t64_1.26-1+b2 libgdbm6t64_1.26-1+b2 libgfortran5_16.1.0-2 libglib2.0-0t64_2.88.2-1 libgmp-dev_2:6.3.0+dfsg-5+b2 libgmp10_2:6.3.0+dfsg-5+b2 libgmpxx4ldbl_2:6.3.0+dfsg-5+b2 libgnutls-dane0t64_3.8.13-1 libgnutls28-dev_3.8.13-1 libgnutls30t64_3.8.13-1 libgomp1_16.1.0-2 libgpg-error0_1.61-3 libgprofng0_2.46.50.20260617-1 libgraphite2-3_1.3.15-2 libgssapi-krb5-2_1.22.1-3 libgssrpc4t64_1.22.1-3 libharfbuzz-subset0_12.3.2-2+b2 libharfbuzz0b_12.3.2-2+b2 libhdf5-310_1.14.6+repack-2+b1 libhdf5-cpp-310_1.14.6+repack-2+b1 libhdf5-dev_1.14.6+repack-2+b1 libhdf5-fortran-310_1.14.6+repack-2+b1 libhdf5-hl-310_1.14.6+repack-2+b1 libhdf5-hl-cpp-310_1.14.6+repack-2+b1 libhdf5-hl-fortran-310_1.14.6+repack-2+b1 libhogweed6t64_3.10.2-1+b1 libhwasan0_16.1.0-2 libice6_2:1.1.1-1+b2 libicu78_78.3-2 libidn2-0_2.3.8-5 libidn2-dev_2.3.8-5 libisl23_0.27-2 libitm1_16.1.0-2 libjansson4_2.15.0-1 libjpeg-dev_1:3.1.3-4 libjpeg62-turbo_1:3.1.3-4 libjpeg62-turbo-dev_1:3.1.3-4 libjsoncpp26_1.9.7-4 libk5crypto3_1.22.1-3 libkadm5clnt-mit12_1.22.1-3 libkadm5srv-mit12_1.22.1-3 libkdb5-10t64_1.22.1-3 libkeyutils1_1.6.3-6+b2 libkpathsea6_2026.20260303.78225+ds-4 libkrb5-3_1.22.1-3 libkrb5-dev_1.22.1-3 libkrb5support0_1.22.1-3 libksba8_1.8.0-3 libldap-dev_2.6.13+dfsg-1+b1 libldap2_2.6.13+dfsg-1+b1 liblsan0_16.1.0-2 liblz4-1_1.10.0-10 liblzma-dev_5.8.3-1 liblzma5_5.8.3-1 libmagic-mgc_1:5.47-4 libmagic1t64_1:5.47-4 libmd0_1.2.0-2 libminc-dev_2.5.0-2 libminc2-5.3.0t64_2.5.0-2 libmount1_2.42.2-1 libmpc3_1.3.1-3 libmpfi0_1.5.4+ds-5 libmpfr6_4.2.2-3 libncursesw6_6.6+20251231-1+b1 libnetcdf-dev_1:4.10.0-1 libnetcdf22_1:4.10.0-1 libnettle8t64_3.10.2-1+b1 libnghttp2-14_1.69.0-1 libnghttp2-dev_1.69.0-1 libnghttp3-9_1.15.0-1 libnghttp3-dev_1.15.0-1 libngtcp2-16_1.22.1-1 libngtcp2-crypto-gnutls8_1.22.1-1 libngtcp2-crypto-ossl-dev_1.22.1-1 libngtcp2-crypto-ossl0_1.22.1-1 libngtcp2-dev_1.22.1-1 libnifti2-2_3.0.1-9.1+b2 libnifti2-dev_3.0.1-9.1+b2 libnifticdf-dev_3.0.1-9.1+b2 libnifticdf2_3.0.1-9.1+b2 libniftiio-dev_3.0.1-9.1+b2 libniftiio2t64_3.0.1-9.1+b2 libnpth0t64_1.8-3+b2 libp11-kit-dev_0.26.2-3 libp11-kit0_0.26.2-3 libpam-modules_1.7.0-6 libpam-modules-bin_1.7.0-6 libpam-runtime_1.7.0-6 libpam0g_1.7.0-6 libpaper-utils_2.2.5-0.4 libpaper2_2.2.5-0.4 libpcre2-8-0_10.46-1+b2 libperl5.40_5.40.1-8 libperl5.44_5.44.0~rc1-1 libpipeline1_1.5.8-3 libpixman-1-0_0.46.4-1+b2 libpkgconf7_2.5.1-4 libpng16-16t64_1.6.58-1 libpotrace0_1.16-2+b3 libproc2-0_2:4.0.4-9+b2 libpsl-dev_0.22.0-1 libpsl5t64_0.22.0-1 libptexenc1_2026.20260303.78225+ds-4 libquadmath0_16.1.0-2 libreadline8t64_8.3-4 librhash1_1.4.6-1.1+b1 librtmp-dev_2.6-1 librtmp1_2.6-1 libsasl2-2_2.1.28+dfsg1-11 libsasl2-modules-db_2.1.28+dfsg1-11 libseccomp2_2.6.0-2+b1 libselinux1_3.10-1 libsframe3_2.46.50.20260617-1 libsm6_2:1.2.6-1+b2 libsmartcols1_2.42.2-1 libsqlite3-0_3.53.3-1 libssh2-1-dev_1.11.1-4 libssh2-1t64_1.11.1-4 libssl-dev_3.6.3-1 libssl3t64_3.6.3-1 libstdc++-15-dev_15.3.0-1 libstdc++6_16.1.0-2 libsynctex2_2026.20260303.78225+ds-4 libsystemd0_261.1-2 libsz2_1.1.7-1 libtasn1-6_4.21.0-2+b1 libtasn1-6-dev_4.21.0-2+b1 libteckit0_2.5.13+ds-2 libtexlua53-5_2026.20260303.78225+ds-4 libtext-charwidth-perl_0.04-12+b1 libtext-wrapi18n-perl_0.06-11 libtinfo6_6.6+20251231-1+b1 libtool_2.5.4-11 libtsan2_16.1.0-2 libubsan1_16.1.0-2 libuchardet0_0.0.8-2+b2 libudev1_261.1-2 libunbound8_1.25.1-1+b1 libunistring-dev_1.4.2-1 libunistring5_1.4.2-1 libuuid1_2.42.2-1 libuv1t64_1.52.1-4 libx11-6_2:1.8.13-1 libx11-data_2:1.8.13-1 libxau6_1:1.0.11-1+b2 libxaw7_2:1.0.16-1+b2 libxcb-render0_1.17.0-2+b2 libxcb-shm0_1.17.0-2+b2 libxcb1_1.17.0-2+b2 libxdmcp6_1:1.1.5-2+b1 libxext6_2:1.3.4-1+b4 libxi6_2:1.8.2-2+b1 libxml2-16_2.15.3+dfsg-1 libxml2-dev_2.15.3+dfsg-1 libxmu6_2:1.1.3-4+b1 libxpm4_1:3.5.19-1 libxrender1_1:0.9.12-1+b2 libxt6t64_1:1.2.1-1.3+b2 libxxhash0_0.8.3-2+b2 libznz-dev_3.0.1-9.1+b2 libznz3_3.0.1-9.1+b2 libzstd-dev_1.5.7+dfsg-3+b2 libzstd1_1.5.7+dfsg-3+b2 libzzip-0-13t64_0.13.78+dfsg.1-0.2+b1 linux-libc-dev_7.0.13-1 m4_1.4.21-1 make_4.4.1-3 man-db_2.13.1-1 mawk_1.3.4.20260302-1 ncurses-base_6.6+20251231-1 ncurses-bin_6.6+20251231-1+b1 nettle-dev_3.10.2-1+b1 openssl-provider-legacy_3.6.3-1 patch_2.8-2 perl_5.44.0~rc1-1 perl-base_5.44.0~rc1-1 perl-modules-5.40_5.40.1-8 perl-modules-5.44_5.44.0~rc1-1 pinentry-curses_1.3.2-4 pkgconf_2.5.1-4 pkgconf-bin_2.5.1-4 po-debconf_1.0.22 procps_2:4.0.4-9+b2 readline-common_8.3-4 rpcsvc-proto_1.4.4-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-3 sensible-utils_0.0.26 sqv_1.4.0-1 sysvinit-utils_3.18-1 t1utils_1.41-4 tar_1.35+dfsg-4 tex-common_6.20 texlive-base_2026.20260527-3 texlive-binaries_2026.20260303.78225+ds-4 texlive-latex-base_2026.20260527-3 ucf_3.0056 util-linux_2.42.2-1 x11-common_1:7.7+26 xdg-utils_1.2.1-2 xz-utils_5.8.3-1 zlib1g_1:1.3.dfsg+really1.3.2-3 zlib1g-dev_1:1.3.dfsg+really1.3.2-3 +------------------------------------------------------------------------------+ | Build Mon, 29 Jun 2026 08:19:50 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: minc-tools Binary: minc-tools Architecture: any Version: 2.3.00+dfsg-17 Maintainer: Debian Med Packaging Team Uploaders: Steve M. Robbins , Andreas Tille Homepage: https://www.bic.mni.mcgill.ca/ServicesSoftware/HomePage Standards-Version: 4.7.4 Vcs-Browser: https://salsa.debian.org/med-team/minc-tools Vcs-Git: https://salsa.debian.org/med-team/minc-tools.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cmake, bison, flex, libminc-dev, libhdf5-dev, libnifti2-dev, libnetcdf-dev, zlib1g-dev, texlive-latex-base, debhelper Package-List: minc-tools deb science optional arch=any Checksums-Sha1: d5f2d7d633410b1a1f1d4026adcd2c125a16847f 2885395 minc-tools_2.3.00+dfsg.orig.tar.gz dd80734aae0ec1ca1eec6ea26ef8f406ad488d44 19584 minc-tools_2.3.00+dfsg-17.debian.tar.xz Checksums-Sha256: 002b01c54b11305dc7350cc7e553debc4d07d4896b2eee850233d07ecc9989b9 2885395 minc-tools_2.3.00+dfsg.orig.tar.gz 163ed053509a47119495eff57429c36c48b93cb7d5209c47b11452802ad448b3 19584 minc-tools_2.3.00+dfsg-17.debian.tar.xz Files: 629912702e72bce17b78361027105e2b 2885395 minc-tools_2.3.00+dfsg.orig.tar.gz 43a5ef82217b8f57c5563fd52d452057 19584 minc-tools_2.3.00+dfsg-17.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmoanNoRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHl3A//egCrMOmnhndJc6ofhLMRPu72SUApN/qs 865y8Y4SSt9NThcPm4h1TDxdif+HMLN/6RecdBAJ77vW9dPA72qxxGfTqQyhusJo 54q86YAMaj/adkuwB5fNoeCKpD0QnQ3DZqrHPDNfUgJ6840G5W2QQ9N3HiCwyDDC HqRkXm/cVYqZKGNFvuN6ZVSgvOIrSN26qduHh7bgmW/A4mOXx21WQBr1sWWicmnf i5aSb1z+WSZ+AYgJLXYB7otdiWlYSchQVeeMO9uVLkD5wj7gBgpR10uwF3OCubVI wi6PySHVSBRmWjvi52kPo4D9WXDDy2k0GZQa0ibnt/KwWhTYBZpZjRYxXs8cCzaU 8/0391V0fYkCTUAUI/P8bZ8Q5Ub9kXwM+kFn+tcnnbUpZFbFDystH5aYoLWugqmi XFPRaaSGqmcr5kI/LbmKEDKPOs2cSXh9x7sPJAhTwQw3sZNL19guhS615FPMrr9K Z9NtqJ14gq1Af/jjyDHJYvrl25MEX5Yp8DQjy2nqlORSd9nl7V60M6S/zUjkXMcD PpeiDjOfHX6yPmqeAWg/+9jfyx5g7r1rtAtQ+JS0+MELrr8i0gCwAcmDlPWVgTNR bSBaOfOnChsT0YKFdnurA/e5K5bXPeEhOn02EtmWfAAXqlRbRHTF9B6A5nRExQam u4MBXE540Lk= =5UiE -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./minc-tools_2.3.00+dfsg-17.dsc: missing OpenPGP keyrings dpkg-source: info: verifying ./minc-tools_2.3.00+dfsg-17.dsc dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-keyring.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-tag2upload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-nonupload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting minc-tools in /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg dpkg-source: info: unpacking minc-tools_2.3.00+dfsg.orig.tar.gz dpkg-source: info: unpacking minc-tools_2.3.00+dfsg-17.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 01_mincedit-sensible-viewer.diff dpkg-source: info: applying build-with-libnifti dpkg-source: info: applying hdf5-1.10-support.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying fix_manpages.patch dpkg-source: info: applying fix-gcc10-build.patch dpkg-source: info: applying mnc2nii-use-size-t.patch dpkg-source: info: applying netcdf-4.9.3.patch dpkg-source: info: applying cmake_4.2.patch dpkg-source: info: applying ignore_local_cmake_findhdf5.patch clean up apt cache ------------------ Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Time Build Commands Mon, 29 Jun 2026 08:19:51 +0000 | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/starting-build-commands/no-network minc-tools_2.3.00+dfsg-17 perl-5.44-throwaway amd64 -------------------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/starting-build-commands/no-network minc-tools_2.3.00+dfsg-17 perl-5.44-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANGUAGE=en_GB:en LC_ALL=C.UTF-8 LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so LOGNAME=debomatic PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg SCHROOT_ALIAS_NAME=perl-5.44-throwaway-amd64-debomatic SCHROOT_CHROOT_NAME=perl-5.44-amd64-debomatic SCHROOT_COMMAND=env SCHROOT_GID=110 SCHROOT_GROUP=sbuild SCHROOT_SESSION_ID=perl-5.44-amd64-debomatic-3534a8b5-829c-4a88-9c72-df95216bf21c SCHROOT_UID=1002 SCHROOT_USER=debomatic SHELL=/bin/sh USER=debomatic dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -Zxz dpkg-buildpackage: info: source package minc-tools dpkg-buildpackage: info: source version 2.3.00+dfsg-17 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source -Zxz --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean dpkg-source -Zxz -b . dpkg-source: info: using source format '3.0 (quilt)' dpkg-source: info: building minc-tools using existing ../minc-tools_2.3.00+dfsg.orig.tar.gz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: building minc-tools in ../minc-tools_2.3.00+dfsg-17.debian.tar.xz dpkg-source: info: building minc-tools in ../minc-tools_2.3.00+dfsg-17.dsc debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg' dh_auto_configure -- -DCMAKE_POLICY_VERSION_MINIMUM=3.5 cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=x86_64-linux-gnu-pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_C_COMPILER=/usr/bin/x86_64-linux-gnu-gcc -DCMAKE_CXX_COMPILER=/usr/bin/x86_64-linux-gnu-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/x86_64-linux-gnu-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/x86_64-linux-gnu-pkg-config -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_POLICY_VERSION_MINIMUM=3.5 .. -- The C compiler identification is GNU 15.3.0 -- The CXX compiler identification is GNU 15.3.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/x86_64-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/x86_64-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.3.2") -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libpthread.a;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.14.6") found components: C -- Found NetCDF headers: /usr/include -- Found NetCDF library: /usr/lib/x86_64-linux-gnu/libnetcdf.so CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/LIBMINC/UseLIBMINC.cmake:10 (message): UseLIBMINC.cmake is deprecated. Prefer linking against the imported targets LIBMINC::minc2 (and LIBMINC::minc_io for ezminc) which automatically propagate include directories, compile definitions, and link dependencies. Call Stack (most recent call first): CMakeLists.txt:46 (INCLUDE) -- Looking for mkstemp -- Looking for mkstemp - found -- Looking for tmpnam -- Looking for tmpnam - found -- Looking for tempnam -- Looking for tempnam - found -- Looking for strerror -- Looking for strerror - found -- Looking for popen -- Looking for popen - found -- Looking for fork -- Looking for fork - found -- Looking for vfork -- Looking for vfork - found -- Looking for fdopen -- Looking for fdopen - found -- Looking for strdup -- Looking for strdup - found -- Looking for getpwnam -- Looking for getpwnam - found -- Looking for select -- Looking for select - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for system -- Looking for system - found -- Looking for include file float.h -- Looking for include file float.h - found -- Looking for include file sys/dir.h -- Looking for include file sys/dir.h - found -- Looking for include file sys/ndir.h -- Looking for include file sys/ndir.h - not found -- Looking for include file sys/stat.h -- Looking for include file sys/stat.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file sys/wait.h -- Looking for include file sys/wait.h - found -- Looking for include file values.h -- Looking for include file values.h - found -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file memory.h -- Looking for include file memory.h - found -- Looking for include file stdlib.h -- Looking for include file stdlib.h - found -- Looking for include file fcntl.h -- Looking for include file fcntl.h - found -- Looking for include file dlfcn.h -- Looking for include file dlfcn.h - found -- Looking for include file vfork.h -- Looking for include file vfork.h - not found -- Looking for include file inttypes.h -- Looking for include file inttypes.h - found -- Looking for include file string.h -- Looking for include file string.h - found -- Looking for include file strings.h -- Looking for include file strings.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Found BISON: /usr/bin/bison (found version "3.8.2") -- Found FLEX: /usr/bin/flex (found version "2.6.4") -- Configuring done (6.2s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED PKGCONFIG_EXECUTABLE PKG_CONFIG_EXECUTABLE -- Build files have been written to: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg' dh_auto_build cd obj-x86_64-linux-gnu && make -j2 INSTALL="install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg -B/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/CMakeFiles /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/invert_raw_image.dir/build.make progs/CMakeFiles/invert_raw_image.dir/depend make -f progs/CMakeFiles/mincaverage.dir/build.make progs/CMakeFiles/mincaverage.dir/depend make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/invert_raw_image.dir/DependInfo.cmake "--color=" invert_raw_image make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/mincaverage.dir/DependInfo.cmake "--color=" mincaverage make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/invert_raw_image.dir/build.make progs/CMakeFiles/invert_raw_image.dir/build make -f progs/CMakeFiles/mincaverage.dir/build.make progs/CMakeFiles/mincaverage.dir/build make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 1%] Building C object progs/CMakeFiles/mincaverage.dir/mincaverage/mincaverage.c.o [ 2%] Building C object progs/CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincaverage.dir/mincaverage/mincaverage.c.o -MF CMakeFiles/mincaverage.dir/mincaverage/mincaverage.c.o.d -o CMakeFiles/mincaverage.dir/mincaverage/mincaverage.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincaverage/mincaverage.c cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o -MF CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o.d -o CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincview/invert_raw_image.c [ 3%] Linking C executable invert_raw_image cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/invert_raw_image.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,--dependency-file=CMakeFiles/invert_raw_image.dir/link.d CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o -o invert_raw_image -lminc2 -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 3%] Built target invert_raw_image make -f progs/CMakeFiles/minccalc.dir/build.make progs/CMakeFiles/minccalc.dir/depend make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 4%] [FLEX][lex] Building scanner with flex 2.6.4 cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E make_directory /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/flex -o/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/lex.c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc/lex.l [ 5%] [BISON][gram] Building parser with bison 3.8.2 cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E make_directory /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/bison --debug -d -o /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/gram.c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc/gram.y /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc/gram.y: warning: 111 shift/reduce conflicts [-Wconflicts-sr] /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc/gram.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples [ 6%] Linking C executable mincaverage cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincaverage.dir/link.txt --verbose=1 cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/minccalc.dir/DependInfo.cmake "--color=" minccalc make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/minccalc.dir/build.make progs/CMakeFiles/minccalc.dir/build make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 7%] Building C object progs/CMakeFiles/minccalc.dir/minccalc/minccalc.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccalc.dir/minccalc/minccalc.c.o -MF CMakeFiles/minccalc.dir/minccalc/minccalc.c.o.d -o CMakeFiles/minccalc.dir/minccalc/minccalc.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc/minccalc.c /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,--dependency-file=CMakeFiles/mincaverage.dir/link.d CMakeFiles/mincaverage.dir/mincaverage/mincaverage.c.o -o mincaverage -lminc2 -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 7%] Built target mincaverage make -f progs/CMakeFiles/mincgen.dir/build.make progs/CMakeFiles/mincgen.dir/depend make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 8%] [FLEX][ncgenyy] Building scanner with flex 2.6.4 cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E make_directory /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/flex -o/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/ncgenyy.c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen/ncgenyy.l [ 8%] [BISON][ncgentab] Building parser with bison 3.8.2 cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E make_directory /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/bison -d -o /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/ncgentab.c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen/ncgentab.y /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen/ncgentab.y: warning: 1 shift/reduce conflict [-Wconflicts-sr] /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen/ncgentab.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/mincgen.dir/DependInfo.cmake "--color=" mincgen make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincgen.dir/build.make progs/CMakeFiles/mincgen.dir/build make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 9%] Building C object progs/CMakeFiles/mincgen.dir/mincgen/main.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincgen.dir/mincgen/main.c.o -MF CMakeFiles/mincgen.dir/mincgen/main.c.o.d -o CMakeFiles/mincgen.dir/mincgen/main.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen/main.c [ 9%] Building C object progs/CMakeFiles/minccalc.dir/minccalc/eval.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccalc.dir/minccalc/eval.c.o -MF CMakeFiles/minccalc.dir/minccalc/eval.c.o.d -o CMakeFiles/minccalc.dir/minccalc/eval.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc/eval.c [ 10%] Building C object progs/CMakeFiles/mincgen.dir/ncgentab.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincgen.dir/ncgentab.c.o -MF CMakeFiles/mincgen.dir/ncgentab.c.o.d -o CMakeFiles/mincgen.dir/ncgentab.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/ncgentab.c [ 10%] Building C object progs/CMakeFiles/mincgen.dir/ncgenyy.c.o cd 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CMakeFiles/mincgen.dir/mincgen/genlib.c.o.d -o CMakeFiles/mincgen.dir/mincgen/genlib.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen/genlib.c [ 19%] Building C object progs/CMakeFiles/minccalc.dir/gram.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 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output of 22 bytes 161 | (void) sprintf(cp,"%.16g",* (doublep + num)); | ^~~~~~~ In file included from /usr/include/stdio.h:970, from /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen/genlib.c:11: In function ‘sprintf’, inlined from ‘cstring’ at /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen/genlib.c:161:9, inlined from ‘gen_c’ at /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen/genlib.c:361:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 24 bytes into a destination of size 20 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong 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'/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincdump.dir/build.make progs/CMakeFiles/mincdump.dir/build make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincexample1.dir/build.make progs/CMakeFiles/mincexample1.dir/build make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 27%] Building C object progs/CMakeFiles/mincexample1.dir/mincexample/mincexample1.c.o [ 27%] Building C object progs/CMakeFiles/mincdump.dir/mincdump/mincdump.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu 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cmake_link_script CMakeFiles/mincexample1.dir/link.txt --verbose=1 [ 29%] Building C object progs/CMakeFiles/mincdump.dir/mincdump/vardata.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincdump.dir/mincdump/vardata.c.o -MF 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progs/CMakeFiles/mincdump.dir/mincdump/dumplib.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincdump.dir/mincdump/dumplib.c.o -MF CMakeFiles/mincdump.dir/mincdump/dumplib.c.o.d -o CMakeFiles/mincdump.dir/mincdump/dumplib.c.o 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'/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 32%] Building C object progs/CMakeFiles/mincexpand.dir/mincexpand/mincexpand.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT 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-Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,--dependency-file=CMakeFiles/mincexpand.dir/link.d CMakeFiles/mincexpand.dir/mincexpand/mincexpand.c.o -o mincexpand -lminc2 -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 34%] Built target mincexpand make -f progs/CMakeFiles/mincextract.dir/build.make progs/CMakeFiles/mincextract.dir/depend make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/mincextract.dir/DependInfo.cmake "--color=" mincextract /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,--dependency-file=CMakeFiles/mincdump.dir/link.d CMakeFiles/mincdump.dir/mincdump/mincdump.c.o CMakeFiles/mincdump.dir/mincdump/vardata.c.o CMakeFiles/mincdump.dir/mincdump/dumplib.c.o -o mincdump -lminc2 -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincextract.dir/build.make 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&& /usr/bin/cmake -E cmake_link_script CMakeFiles/mincmakevector.dir/link.txt --verbose=1 [ 44%] Building C object progs/CMakeFiles/mincmath.dir/mincmath/mincmath.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT 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progs/CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o -MF CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o.d -o CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minc_modify_header/minc_modify_header.c [ 46%] Linking C executable mincmath cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincmath.dir/link.txt --verbose=1 [ 46%] Linking C executable minc_modify_header cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_modify_header.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro 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mincmath make -f progs/CMakeFiles/mincresample.dir/build.make progs/CMakeFiles/mincresample.dir/depend [ 46%] Built target minc_modify_header make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/mincresample.dir/DependInfo.cmake "--color=" mincresample make -f progs/CMakeFiles/mincreshape.dir/build.make progs/CMakeFiles/mincreshape.dir/depend make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd 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progs/CMakeFiles/mincreshape.dir/mincreshape/mincreshape.c.o -MF CMakeFiles/mincreshape.dir/mincreshape/mincreshape.c.o.d -o CMakeFiles/mincreshape.dir/mincreshape/mincreshape.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincreshape/mincreshape.c [ 48%] Building C object progs/CMakeFiles/mincresample.dir/mincresample/mincresample.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincresample.dir/mincresample/mincresample.c.o -MF CMakeFiles/mincresample.dir/mincresample/mincresample.c.o.d -o CMakeFiles/mincresample.dir/mincresample/mincresample.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c: In function ‘create_output_file.constprop’: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:1454:39: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 1454 | (void) sprintf(string, "%s%d", dimname, idim); | ^~ /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:1454:36: note: directive argument in the range [0, 2147483647] 1454 | (void) sprintf(string, "%s%d", dimname, idim); | ^~~~~~ In file included from /usr/include/stdio.h:970, from /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:207: In function ‘sprintf’, inlined from ‘create_output_file.constprop’ at /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:1454:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 266 bytes into a destination of size 256 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 48%] Building C object progs/CMakeFiles/mincreshape.dir/mincreshape/copy_data.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincreshape.dir/mincreshape/copy_data.c.o -MF CMakeFiles/mincreshape.dir/mincreshape/copy_data.c.o.d -o CMakeFiles/mincreshape.dir/mincreshape/copy_data.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincreshape/copy_data.c [ 48%] Building C object progs/CMakeFiles/mincresample.dir/mincresample/resample_volumes.c.o cd 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/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincresample/resample_volumes.c [ 49%] Linking C executable mincreshape cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincreshape.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,--dependency-file=CMakeFiles/mincreshape.dir/link.d CMakeFiles/mincreshape.dir/mincreshape/mincreshape.c.o CMakeFiles/mincreshape.dir/mincreshape/copy_data.c.o -o mincreshape -lminc2 -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 49%] Built target mincreshape make -f progs/CMakeFiles/mincstats.dir/build.make progs/CMakeFiles/mincstats.dir/depend make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/mincstats.dir/DependInfo.cmake "--color=" mincstats make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincstats.dir/build.make progs/CMakeFiles/mincstats.dir/build make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 50%] 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincmorph.dir/mincmorph/kernel_ops.c.o -MF CMakeFiles/mincmorph.dir/mincmorph/kernel_ops.c.o.d -o CMakeFiles/mincmorph.dir/mincmorph/kernel_ops.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincmorph/kernel_ops.c [ 61%] Building C object progs/CMakeFiles/mincsample.dir/mincsample/mt19937ar.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincsample.dir/mincsample/mt19937ar.c.o -MF CMakeFiles/mincsample.dir/mincsample/mt19937ar.c.o.d -o CMakeFiles/mincsample.dir/mincsample/mt19937ar.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincsample/mt19937ar.c [ 61%] Linking C executable mincsample cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincsample.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection 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/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/rawtominc.dir/DependInfo.cmake "--color=" rawtominc make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/rawtominc.dir/build.make progs/CMakeFiles/rawtominc.dir/build make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 62%] Building C object progs/CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o -MF CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o.d -o CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/rawtominc/rawtominc.c [ 63%] Linking C executable mincmorph cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincmorph.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,--dependency-file=CMakeFiles/mincmorph.dir/link.d CMakeFiles/mincmorph.dir/mincmorph/mincmorph.c.o CMakeFiles/mincmorph.dir/mincmorph/kernel_io.c.o CMakeFiles/mincmorph.dir/mincmorph/kernel_ops.c.o -o mincmorph -lminc2 -lz -lm -ldl -lnetcdf -lminc2 -lz -lm -ldl -lnetcdf -lminc2 -lz -lm -ldl -lnetcdf -lm -lminc2 -lz -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 63%] Built target mincmorph make -f progs/CMakeFiles/voxeltoworld.dir/build.make progs/CMakeFiles/voxeltoworld.dir/depend make[3]: Entering directory 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/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/coordinates/voxeltoworld.c [ 65%] Linking C executable voxeltoworld cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/voxeltoworld.dir/link.txt --verbose=1 [ 66%] Building C object progs/CMakeFiles/rawtominc.dir/Proglib/convert_origin_to_start.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/rawtominc.dir/Proglib/convert_origin_to_start.c.o -MF CMakeFiles/rawtominc.dir/Proglib/convert_origin_to_start.c.o.d -o CMakeFiles/rawtominc.dir/Proglib/convert_origin_to_start.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/Proglib/convert_origin_to_start.c /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,--dependency-file=CMakeFiles/voxeltoworld.dir/link.d CMakeFiles/voxeltoworld.dir/coordinates/voxeltoworld.c.o -o voxeltoworld -lminc2 -lz -lm -ldl -lnetcdf -lminc2 -lz -lm -ldl -lnetcdf -lminc2 -lz -lm -ldl -lnetcdf -lm -lminc2 -lz -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 66%] Built target voxeltoworld make -f progs/CMakeFiles/worldtovoxel.dir/build.make progs/CMakeFiles/worldtovoxel.dir/depend make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/worldtovoxel.dir/DependInfo.cmake "--color=" worldtovoxel make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/worldtovoxel.dir/build.make progs/CMakeFiles/worldtovoxel.dir/build make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 67%] Building C object progs/CMakeFiles/worldtovoxel.dir/coordinates/worldtovoxel.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong 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'/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion/CMakeFiles/minctoecat.dir/DependInfo.cmake "--color=" minctoecat make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f conversion/CMakeFiles/minctoecat.dir/build.make conversion/CMakeFiles/minctoecat.dir/build make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 87%] Building C object conversion/CMakeFiles/minctoecat.dir/minctoecat/minctoecat.c.o cd 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/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/nifti1/nii2mnc.c:204:13: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 204 | fread(&ana_hdr, sizeof (ana_hdr), 1, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 92%] Linking C executable minctoecat cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cmake -E cmake_link_script CMakeFiles/minctoecat.dir/link.txt --verbose=1 [ 93%] Linking C executable nii2mnc cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cmake -E cmake_link_script CMakeFiles/nii2mnc.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,--dependency-file=CMakeFiles/minctoecat.dir/link.d CMakeFiles/minctoecat.dir/minctoecat/minctoecat.c.o CMakeFiles/minctoecat.dir/minctoecat/ecat_write.c.o CMakeFiles/minctoecat.dir/minctoecat/machine_indep.c.o -o minctoecat -lminc2 -lz -lm -ldl -lnetcdf -lminc2 -lz -lm -ldl -lnetcdf -lminc2 -lz -lm -ldl -lnetcdf -lm -lminc2 -lz -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target minctoecat make -f conversion/CMakeFiles/upet2mnc.dir/build.make conversion/CMakeFiles/upet2mnc.dir/depend make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion/CMakeFiles/upet2mnc.dir/DependInfo.cmake "--color=" upet2mnc make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f conversion/CMakeFiles/upet2mnc.dir/build.make conversion/CMakeFiles/upet2mnc.dir/build make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 94%] Building C object conversion/CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o -MF CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o.d -o CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c:419:36: warning: macro ‘__DATE__’ might prevent reproducible builds [-Wdate-time] 419 | {NULL, ARGV_VERINFO, (char *) VERSIONSTR, (char *) NULL, NULL}, | ^~~~~~~~~~ /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c:16:38: warning: macro ‘__TIME__’ might prevent reproducible builds [-Wdate-time] 16 | #define VERSIONSTR VERSION " built " __DATE__ " " __TIME__ | ^~~~~~~~ /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c:419:36: note: in expansion of macro ‘VERSIONSTR’ 419 | {NULL, ARGV_VERINFO, (char *) VERSIONSTR, (char *) NULL, NULL}, | ^~~~~~~~~~ /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c: In function ‘upet_to_minc’: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c:537:19: warning: macro ‘__DATE__’ might prevent reproducible builds [-Wdate-time] 537 | argv_tmp[1] = VERSIONSTR; | ^~~~~~~~~~ /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c:16:38: warning: macro ‘__TIME__’ might prevent reproducible builds [-Wdate-time] 16 | #define VERSIONSTR VERSION " built " __DATE__ " " __TIME__ | ^~~~~~~~ /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c:537:19: note: in expansion of macro ‘VERSIONSTR’ 537 | argv_tmp[1] = VERSIONSTR; | ^~~~~~~~~~ /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,--dependency-file=CMakeFiles/nii2mnc.dir/link.d CMakeFiles/nii2mnc.dir/nifti1/nii2mnc.c.o -o nii2mnc -lminc2 -lz -lm -ldl -lnetcdf -lminc2 -lz -lm -ldl -lnetcdf -lminc2 -lz -lm -ldl -lnetcdf -lniftiio -lm -lminc2 -lz -ldl -lnetcdf -lniftiio make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 94%] Built target nii2mnc make -f conversion/CMakeFiles/dcm2mnc.dir/build.make conversion/CMakeFiles/dcm2mnc.dir/depend make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion/CMakeFiles/dcm2mnc.dir/DependInfo.cmake "--color=" dcm2mnc make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f conversion/CMakeFiles/dcm2mnc.dir/build.make conversion/CMakeFiles/dcm2mnc.dir/build make[3]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 95%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dcm2mnc.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dcm2mnc.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/dcm2mnc.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/dcm2mnc.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:179:26: warning: macro ‘__DATE__’ might prevent reproducible builds [-Wdate-time] 179 | {NULL, ARGV_VERINFO, VERSION_STRING, NULL, NULL }, | ^~~~~~~~~~~~~~ /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:168:41: warning: macro ‘__TIME__’ might prevent reproducible builds [-Wdate-time] 168 | #define VERSION_STRING "2.01.02 built " __DATE__ " " __TIME__ | ^~~~~~~~ /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:179:26: note: in expansion of macro ‘VERSION_STRING’ 179 | {NULL, ARGV_VERINFO, VERSION_STRING, NULL, NULL }, | ^~~~~~~~~~~~~~ /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c: In function ‘is_cdexport_file’: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:1019:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1019 | fread(tst_str, 1, DICM_MAGIC_SIZE, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c: In function ‘is_ima_file’: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:1042:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1042 | fread(mfg_str, 1, IMA_MAGIC_SIZE, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c: In function ‘use_the_files’: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:980:17: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 980 | fscanf(fp, "%s", pipe_output_name); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 95%] Linking C executable upet2mnc cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cmake -E cmake_link_script CMakeFiles/upet2mnc.dir/link.txt --verbose=1 [ 96%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_to_minc.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_to_minc.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_to_minc.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_to_minc.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dicom_to_minc.c /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,--dependency-file=CMakeFiles/upet2mnc.dir/link.d CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o -o upet2mnc -lminc2 -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 96%] Built target upet2mnc [ 97%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/siemens_to_dicom.c [ 97%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dicom_read.c [ 98%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/minc_file.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/minc_file.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/minc_file.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/minc_file.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/minc_file.c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/minc_file.c: In function ‘setup_minc_variables’: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/minc_file.c:1084:17: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1084 | fread(data, 1, length, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 99%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/progress.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/progress.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/progress.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/progress.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/progress.c [100%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/string_to_filename.c.o cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/string_to_filename.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/string_to_filename.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/string_to_filename.c.o -c /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/string_to_filename.c [100%] Linking C executable dcm2mnc cd /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cmake -E cmake_link_script CMakeFiles/dcm2mnc.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,--dependency-file=CMakeFiles/dcm2mnc.dir/link.d CMakeFiles/dcm2mnc.dir/dcm2mnc/dcm2mnc.c.o CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_to_minc.c.o CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o CMakeFiles/dcm2mnc.dir/dcm2mnc/minc_file.c.o CMakeFiles/dcm2mnc.dir/dcm2mnc/progress.c.o CMakeFiles/dcm2mnc.dir/dcm2mnc/string_to_filename.c.o -o dcm2mnc -lminc2 -lz -lm -ldl -lnetcdf libacr_nema.a -lminc2 -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [100%] Built target dcm2mnc make[2]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' dh_auto_test cd obj-x86_64-linux-gnu && make -j2 test ARGS\+=--verbose ARGS\+=-j2 make[1]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' Running tests... /usr/bin/ctest --verbose -j2 UpdateCTestConfiguration from :/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/DartConfiguration.tcl Parse Config file:/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/DartConfiguration.tcl Test project /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end Connected to MAKE jobserver test 1 Start 1: mincinfo-test 1: Test command: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/Testing/mincinfo-test.pl 1: Working Directory: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/Testing 1: Environment variables: 1: MINCINFO_BIN=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincinfo 1: Test timeout computed to be: 1500 test 2 Start 2: mincstats-test 2: Test command: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/Testing/mincstats-test.pl 2: Working Directory: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/Testing 2: Environment variables: 2: MINCSTATS_BIN=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincstats 2: Test timeout computed to be: 1500 1: Case 1 - Test the essential command line options. 2: Case 1 - Basic output. 2: Case 2 - Test the sum and sum2 options. 1: Case 2 - test operation with no command-line options. 1: Case 3 - test the dimnames option. 2: Case 3 - Test the mean option. 2: Case 4 - Test the stddev and variance options. 1: Case 4 - test the varnames option. 2: Case 5 - Test the min and max options. 1: Case 5 - test the dimlength option. 2: Case 6 - Test the CoM option. 1: Case 6 - test the vartype option. 2: Case 7 - Test the median and entropy options. 1: Case 7 - test the vardims option. 2: Case 8 - Test the histogram option. 1: Case 8 - test the varatts option. 2: Case 9 - Test the integer histogram option. 2: OK. 1/6 Test #2: mincstats-test ................... Passed 0.23 sec test 3 Start 3: mincaverage-test 3: Test command: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/Testing/mincaverage-test.sh 3: Working Directory: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/Testing 3: Environment variables: 3: MINCAVERAGE_BIN=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincaverage 3: MINCSTATS_BIN=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincstats 3: Test timeout computed to be: 1500 1: Case 9 - test the varatts option. 3: Processing:...Done 1: Case 10 - test the atttype option. 1: Case 11 - test the attvalue option. 1: Case 12 - test the minc_version option. 3: Normalizing:..Done 3: Processing:...Done 1: Case 13 - test the error_string option. 1: OK. 3: OK. 2/6 Test #3: mincaverage-test ................. Passed 0.13 sec test 4 Start 4: minccalc-test 4: Test command: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/Testing/minccalc-test.sh 4: Working Directory: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/Testing 4: Environment variables: 4: MINCCALC_BIN=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/minccalc 4: MINCSTATS_BIN=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincstats 4: Test timeout computed to be: 1500 3/6 Test #1: mincinfo-test .................... Passed 0.36 sec test 5 Start 5: mincresample-test 5: Test command: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/Testing/mincresample-test.sh 5: Working Directory: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/Testing 5: Environment variables: 5: MINCRESAMPLE_BIN=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincresample 5: MINCSTATS_BIN=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincstats 5: Test timeout computed to be: 1500 5: Transforming slices:.....Done 4: Case 1...OK 5: Transforming slices:.....Done 4: Case 2...OK 5: OK. 4/6 Test #5: mincresample-test ................ Passed 0.14 sec test 6 Start 6: mincreshape-test 6: Test command: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/Testing/mincreshape-test.pl 6: Working Directory: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/Testing 6: Environment variables: 6: MINCRESHAPE_BIN=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincreshape 6: MINCSTATS_BIN=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincstats 6: MINCINFO_BIN=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincinfo 6: MINCEXTRACT_BIN=/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincextract 6: Test timeout computed to be: 1500 4: Case 3...OK 4: Case 4...OK 4: Case 5...OK...OK 4: Case 6...OK...OK...OK 4: Case 7...OK 4: Case 8...OK 4: Case 9...OK 4: No errors detected. 5/6 Test #4: minccalc-test .................... Passed 0.51 sec 6: OK. 6/6 Test #6: mincreshape-test ................. Passed 0.44 sec 100% tests passed, 0 tests failed out of 6 Total Test time (real) = 0.95 sec make[1]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/minc-tools/ cd obj-x86_64-linux-gnu && make -j2 install DESTDIR=/build/minc-tools-dzBsiR/minc-tools-2.3.00\+dfsg/debian/minc-tools AM_UPDATE_INFO_DIR=no INSTALL="install --strip-program=true" make[1]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg -B/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minccalc -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincgen -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/invert_raw_image -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincaverage -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincconcat -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincconvert -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minccopy -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincdump -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincblob -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minccmp -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincexpand -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincextract -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincinfo -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minclookup -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmakescalar -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmakevector -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmath -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minc_modify_header -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincresample -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincreshape -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincstats -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minctoraw -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincwindow -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmorph -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincsample -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/rawtominc -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/voxeltoworld -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/worldtovoxel -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/transformtags -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/xfmconcat -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/xfminvert -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincdiff -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincedit -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincheader -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincview -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minchistory -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincpik -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/voxeltoworld.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincaverage.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincblob.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minccalc.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minccmp.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincconcat.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincconvert.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minccopy.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincdiff.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincdump.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincedit.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincexpand.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincextract.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincgen.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincheader.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincinfo.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minclookup.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincmakescalar.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincmakevector.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincmath.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minc_modify_header.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincresample.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincreshape.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincsample.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincstats.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minctoraw.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/invert_raw_image.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincview.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincwindow.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/rawtominc.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/transformtags.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/xfm2def.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/xfmconcat.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/xfmflip.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/xfminvert.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/dcm2mnc -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/ecattominc -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minctoecat -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mnc2nii -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/nii2mnc -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/upet2mnc -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/dcm2mnc.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/ecattominc.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/upet2mnc.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minctoecat.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mnc2nii.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/nii2mnc.1 -- Installing: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/vff2mnc.1 make[1]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' debian/rules override_dh_install make[1]: Entering directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg' cd debian/minc-tools && mkdir -p usr/share && mv usr/man usr/share dh_link /usr/share/man/man1/voxeltoworld.1 \ /usr/share/man/man1/worldtovoxel.1 for pl in `grep -Rl '#![[:space:]]*/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \ sed -i '1s?^#![[:space:]]*/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' ${pl} ; \ done make[1]: Leaving directory '/build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg' dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dpkg-gencontrol: warning: package minc-tools: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package minc-tools: substitution variable ${perl:Depends} unused, but is defined dh_md5sums dh_builddeb dpkg-deb: building package 'minc-tools' in '../minc-tools_2.3.00+dfsg-17_amd64.deb'. dpkg-deb: building package 'minc-tools-dbgsym' in '../minc-tools-dbgsym_2.3.00+dfsg-17_amd64.deb'. dpkg-genbuildinfo -O../minc-tools_2.3.00+dfsg-17_amd64.buildinfo dpkg-genchanges -O../minc-tools_2.3.00+dfsg-17_amd64.changes dpkg-genchanges: info: not including original source code in upload dpkg-source -Zxz --after-build . dpkg-buildpackage: info: binary and diff upload (original source NOT included) -------------------------------------------------------------------------------- Build finished at 2026-06-29T08:20:33Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Mon, 29 Jun 2026 08:20:34 +0000 | +------------------------------------------------------------------------------+ minc-tools_2.3.00+dfsg-17_amd64.changes: ---------------------------------------- Format: 1.8 Date: Sat, 30 May 2026 10:06:54 +0200 Source: minc-tools Binary: minc-tools minc-tools-dbgsym Architecture: source amd64 Version: 2.3.00+dfsg-17 Distribution: perl-5.44-throwaway Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: minc-tools - MNI medical image format tools Closes: 1136921 Changes: minc-tools (2.3.00+dfsg-17) unstable; urgency=medium . * Fix CMake patch and adapt to latest CMake Closes: #1136921 * Standards-Version: 4.7.4 (routine-update) * debputy lint --auto-fix (routine-update) Checksums-Sha1: f53f1ffb1b74123d8c953a971122785a0193fb6b 1300 minc-tools_2.3.00+dfsg-17.dsc dd80734aae0ec1ca1eec6ea26ef8f406ad488d44 19584 minc-tools_2.3.00+dfsg-17.debian.tar.xz 390ce8729093f5d32f41c364ab4eb9eb6b4458d8 712008 minc-tools-dbgsym_2.3.00+dfsg-17_amd64.deb 96b58eed5e0ff9a0683f4760e28d842b41502b20 10030 minc-tools_2.3.00+dfsg-17_amd64.buildinfo 397ed7229fd05cdc2e41f2d512910292160bd812 386644 minc-tools_2.3.00+dfsg-17_amd64.deb Checksums-Sha256: 8179826ed9a200a02683659cdfd3cdd5bb042dbbf253aaf1a048c2f0053a0ef6 1300 minc-tools_2.3.00+dfsg-17.dsc 163ed053509a47119495eff57429c36c48b93cb7d5209c47b11452802ad448b3 19584 minc-tools_2.3.00+dfsg-17.debian.tar.xz d2b6edaa44a5676e3d9e54ac491ed0221c6afc3b9f61e85e49cb963bfb4379c5 712008 minc-tools-dbgsym_2.3.00+dfsg-17_amd64.deb b5ac7186301bb8bc0491654ca124f6ae593e459b4a2353432e8581136f81a4de 10030 minc-tools_2.3.00+dfsg-17_amd64.buildinfo f8cf444adb4c9f5c5e55b07f4b8dd16c80e2f97939d3592fc035e124b5381799 386644 minc-tools_2.3.00+dfsg-17_amd64.deb Files: d12678c9dd75759a51bfdd63abadc7ed 1300 science optional minc-tools_2.3.00+dfsg-17.dsc 43a5ef82217b8f57c5563fd52d452057 19584 science optional minc-tools_2.3.00+dfsg-17.debian.tar.xz c97dd5e4d34a3752ccf49fdbad8582ec 712008 debug optional minc-tools-dbgsym_2.3.00+dfsg-17_amd64.deb 9c4ac582898650a3d3f0d0de3677f2b9 10030 science optional minc-tools_2.3.00+dfsg-17_amd64.buildinfo c01eace436a0b220d426791767188fa9 386644 science optional minc-tools_2.3.00+dfsg-17_amd64.deb +------------------------------------------------------------------------------+ | Buildinfo Mon, 29 Jun 2026 08:20:34 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: minc-tools Binary: minc-tools minc-tools-dbgsym Architecture: amd64 source Version: 2.3.00+dfsg-17 Checksums-Md5: d12678c9dd75759a51bfdd63abadc7ed 1300 minc-tools_2.3.00+dfsg-17.dsc c97dd5e4d34a3752ccf49fdbad8582ec 712008 minc-tools-dbgsym_2.3.00+dfsg-17_amd64.deb c01eace436a0b220d426791767188fa9 386644 minc-tools_2.3.00+dfsg-17_amd64.deb Checksums-Sha1: f53f1ffb1b74123d8c953a971122785a0193fb6b 1300 minc-tools_2.3.00+dfsg-17.dsc 390ce8729093f5d32f41c364ab4eb9eb6b4458d8 712008 minc-tools-dbgsym_2.3.00+dfsg-17_amd64.deb 397ed7229fd05cdc2e41f2d512910292160bd812 386644 minc-tools_2.3.00+dfsg-17_amd64.deb Checksums-Sha256: 8179826ed9a200a02683659cdfd3cdd5bb042dbbf253aaf1a048c2f0053a0ef6 1300 minc-tools_2.3.00+dfsg-17.dsc d2b6edaa44a5676e3d9e54ac491ed0221c6afc3b9f61e85e49cb963bfb4379c5 712008 minc-tools-dbgsym_2.3.00+dfsg-17_amd64.deb f8cf444adb4c9f5c5e55b07f4b8dd16c80e2f97939d3592fc035e124b5381799 386644 minc-tools_2.3.00+dfsg-17_amd64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Mon, 29 Jun 2026 08:20:33 +0000 Build-Path: /build/minc-tools-dzBsiR/minc-tools-2.3.00+dfsg Build-Tainted-By: usr-local-has-programs Installed-Build-Depends: autoconf (= 2.73-2), automake (= 1:1.18.1-4), autopoint (= 1.0-1), autotools-dev (= 20240727.1+nmu1), base-files (= 14.2), base-passwd (= 3.6.8), bash (= 5.3-3), binutils (= 2.46.50.20260617-1), binutils-common (= 2.46.50.20260617-1), binutils-x86-64-linux-gnu (= 2.46.50.20260617-1), bison (= 2:3.8.2+dfsg-1+b3), bsdextrautils (= 2.42.2-1), build-essential (= 12.12), bzip2 (= 1.0.8-6+b2), cmake (= 4.3.4-1), comerr-dev (= 2.1-1.47.4-1), coreutils (= 9.10-1), cpp (= 4:15.2.0-5+b1), cpp-15 (= 15.3.0-1), cpp-15-x86-64-linux-gnu (= 15.3.0-1), cpp-x86-64-linux-gnu (= 4:15.2.0-5+b1), dash (= 0.5.12-12), debconf (= 1.5.92), debhelper (= 14.2), debianutils (= 5.23.2), dh-autoreconf (= 22), dh-strip-nondeterminism (= 1.15.1-1), diffutils (= 1:3.12-1), dpkg (= 1.23.7), dpkg-dev (= 1.23.7), dwz (= 0.16-4), file (= 1:5.47-4), findutils (= 4.10.0-4), flex (= 2.6.4-8.2+b5), fontconfig-config (= 2.17.1-5), fonts-dejavu-core (= 2.37-9), fonts-dejavu-mono (= 2.37-9), fonts-lmodern (= 2.005-2), g++ (= 4:15.2.0-5+b1), g++-15 (= 15.3.0-1), g++-15-x86-64-linux-gnu (= 15.3.0-1), g++-x86-64-linux-gnu (= 4:15.2.0-5+b1), gcc (= 4:15.2.0-5+b1), gcc-15 (= 15.3.0-1), gcc-15-base (= 15.3.0-1), gcc-15-x86-64-linux-gnu (= 15.3.0-1), gcc-16-base (= 16.1.0-2), gcc-x86-64-linux-gnu (= 4:15.2.0-5+b1), gettext (= 1.0-1), gettext-base (= 1.0-1), grep (= 3.12-1), groff-base (= 1.24.1-1), gzip (= 1.13-1), hdf5-helpers (= 1.14.6+repack-2+b1), hostname (= 3.25), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), krb5-multidev (= 1.22.1-3), libacl1 (= 2.3.2-3), libaec-dev (= 1.1.7-1), libaec0 (= 1.1.7-1), libarchive-zip-perl (= 1.68-1), libarchive13t64 (= 3.8.7-1), libasan8 (= 16.1.0-2), libatomic1 (= 16.1.0-2), libattr1 (= 1:2.5.2-4), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1+b1), libbinutils (= 2.46.50.20260617-1), libblkid1 (= 2.42.2-1), libbrotli-dev (= 1.2.0-3), libbrotli1 (= 1.2.0-3), libbz2-1.0 (= 1.0.8-6+b2), libc-bin (= 2.42-17), libc-dev-bin (= 2.42-17), libc-gconv-modules-extra (= 2.42-17), libc6 (= 2.42-17), libc6-dev (= 2.42-17), libcairo2 (= 1.18.4-3+b1), libcap-ng0 (= 0.9.3-1), libcc1-0 (= 16.1.0-2), libcom-err2 (= 1.47.4-1), libcrypt1 (= 1:4.5.1-1+b1), libctf-nobfd0 (= 2.46.50.20260617-1), libctf0 (= 2.46.50.20260617-1), libcurl3t64-gnutls (= 8.21.0-2), libcurl4-gnutls (= 8.21.0-2), libcurl4-openssl-dev (= 8.21.0-2), libcurl4t64 (= 8.21.0-2), libdb5.3t64 (= 5.3.28+dfsg2-11+b1), libdebconfclient0 (= 0.283), libdebhelper-perl (= 14.2), libdpkg-perl (= 1.23.7), libelf1t64 (= 0.195-1), libevent-2.1-7t64 (= 2.1.12-stable-10+b2), libexpat1 (= 2.8.2-1), libffi8 (= 3.5.2-4), libfile-stripnondeterminism-perl (= 1.15.1-1), libfontconfig1 (= 2.17.1-5), libfreetype6 (= 2.14.3+dfsg-1), libgcc-15-dev (= 15.3.0-1), libgcc-s1 (= 16.1.0-2), libgdbm-compat4t64 (= 1.26-1+b2), libgdbm6t64 (= 1.26-1+b2), libgfortran5 (= 16.1.0-2), libglib2.0-0t64 (= 2.88.2-1), libgmp-dev (= 2:6.3.0+dfsg-5+b2), libgmp10 (= 2:6.3.0+dfsg-5+b2), libgmpxx4ldbl (= 2:6.3.0+dfsg-5+b2), libgnutls-dane0t64 (= 3.8.13-1), libgnutls28-dev (= 3.8.13-1), libgnutls30t64 (= 3.8.13-1), libgomp1 (= 16.1.0-2), libgprofng0 (= 2.46.50.20260617-1), libgraphite2-3 (= 1.3.15-2), libgssapi-krb5-2 (= 1.22.1-3), libgssrpc4t64 (= 1.22.1-3), libharfbuzz-subset0 (= 12.3.2-2+b2), libharfbuzz0b (= 12.3.2-2+b2), libhdf5-310 (= 1.14.6+repack-2+b1), libhdf5-cpp-310 (= 1.14.6+repack-2+b1), libhdf5-dev (= 1.14.6+repack-2+b1), libhdf5-fortran-310 (= 1.14.6+repack-2+b1), libhdf5-hl-310 (= 1.14.6+repack-2+b1), libhdf5-hl-cpp-310 (= 1.14.6+repack-2+b1), libhdf5-hl-fortran-310 (= 1.14.6+repack-2+b1), libhogweed6t64 (= 3.10.2-1+b1), libhwasan0 (= 16.1.0-2), libice6 (= 2:1.1.1-1+b2), libicu78 (= 78.3-2), libidn2-0 (= 2.3.8-5), libidn2-dev (= 2.3.8-5), libisl23 (= 0.27-2), libitm1 (= 16.1.0-2), libjansson4 (= 2.15.0-1), libjpeg-dev (= 1:3.1.3-4), libjpeg62-turbo (= 1:3.1.3-4), libjpeg62-turbo-dev (= 1:3.1.3-4), libjsoncpp26 (= 1.9.7-4), libk5crypto3 (= 1.22.1-3), libkadm5clnt-mit12 (= 1.22.1-3), libkadm5srv-mit12 (= 1.22.1-3), libkdb5-10t64 (= 1.22.1-3), libkeyutils1 (= 1.6.3-6+b2), libkpathsea6 (= 2026.20260303.78225+ds-4), libkrb5-3 (= 1.22.1-3), libkrb5-dev (= 1.22.1-3), libkrb5support0 (= 1.22.1-3), libldap-dev (= 2.6.13+dfsg-1+b1), libldap2 (= 2.6.13+dfsg-1+b1), liblsan0 (= 16.1.0-2), liblz4-1 (= 1.10.0-10), liblzma-dev (= 5.8.3-1), liblzma5 (= 5.8.3-1), libmagic-mgc (= 1:5.47-4), libmagic1t64 (= 1:5.47-4), libmd0 (= 1.2.0-2), libminc-dev (= 2.5.0-2), libminc2-5.3.0t64 (= 2.5.0-2), libmount1 (= 2.42.2-1), libmpc3 (= 1.3.1-3), libmpfi0 (= 1.5.4+ds-5), libmpfr6 (= 4.2.2-3), libncursesw6 (= 6.6+20251231-1+b1), libnetcdf-dev (= 1:4.10.0-1), libnetcdf22 (= 1:4.10.0-1), libnettle8t64 (= 3.10.2-1+b1), libnghttp2-14 (= 1.69.0-1), libnghttp2-dev (= 1.69.0-1), libnghttp3-9 (= 1.15.0-1), libnghttp3-dev (= 1.15.0-1), libngtcp2-16 (= 1.22.1-1), libngtcp2-crypto-gnutls8 (= 1.22.1-1), libngtcp2-crypto-ossl-dev (= 1.22.1-1), libngtcp2-crypto-ossl0 (= 1.22.1-1), libngtcp2-dev (= 1.22.1-1), libnifti2-2 (= 3.0.1-9.1+b2), libnifti2-dev (= 3.0.1-9.1+b2), libnifticdf-dev (= 3.0.1-9.1+b2), libnifticdf2 (= 3.0.1-9.1+b2), libniftiio-dev (= 3.0.1-9.1+b2), libniftiio2t64 (= 3.0.1-9.1+b2), libp11-kit-dev (= 0.26.2-3), libp11-kit0 (= 0.26.2-3), libpam-modules (= 1.7.0-6), libpam-modules-bin (= 1.7.0-6), libpam-runtime (= 1.7.0-6), libpam0g (= 1.7.0-6), libpaper-utils (= 2.2.5-0.4), libpaper2 (= 2.2.5-0.4), libpcre2-8-0 (= 10.46-1+b2), libperl5.44 (= 5.44.0~rc1-1), libpipeline1 (= 1.5.8-3), libpixman-1-0 (= 0.46.4-1+b2), libpkgconf7 (= 2.5.1-4), libpng16-16t64 (= 1.6.58-1), libpotrace0 (= 1.16-2+b3), libproc2-0 (= 2:4.0.4-9+b2), libpsl-dev (= 0.22.0-1), libpsl5t64 (= 0.22.0-1), libptexenc1 (= 2026.20260303.78225+ds-4), libquadmath0 (= 16.1.0-2), librhash1 (= 1.4.6-1.1+b1), librtmp-dev (= 2.6-1), librtmp1 (= 2.6-1), libsasl2-2 (= 2.1.28+dfsg1-11), libsasl2-modules-db (= 2.1.28+dfsg1-11), libseccomp2 (= 2.6.0-2+b1), libselinux1 (= 3.10-1), libsframe3 (= 2.46.50.20260617-1), libsm6 (= 2:1.2.6-1+b2), libsmartcols1 (= 2.42.2-1), libssh2-1-dev (= 1.11.1-4), libssh2-1t64 (= 1.11.1-4), libssl-dev (= 3.6.3-1), libssl3t64 (= 3.6.3-1), libstdc++-15-dev (= 15.3.0-1), libstdc++6 (= 16.1.0-2), libsynctex2 (= 2026.20260303.78225+ds-4), libsystemd0 (= 261.1-2), libsz2 (= 1.1.7-1), libtasn1-6 (= 4.21.0-2+b1), libtasn1-6-dev (= 4.21.0-2+b1), libteckit0 (= 2.5.13+ds-2), libtexlua53-5 (= 2026.20260303.78225+ds-4), libtext-charwidth-perl (= 0.04-12+b1), libtext-wrapi18n-perl (= 0.06-11), libtinfo6 (= 6.6+20251231-1+b1), libtool (= 2.5.4-11), libtsan2 (= 16.1.0-2), libubsan1 (= 16.1.0-2), libuchardet0 (= 0.0.8-2+b2), libudev1 (= 261.1-2), libunbound8 (= 1.25.1-1+b1), libunistring-dev (= 1.4.2-1), libunistring5 (= 1.4.2-1), libuuid1 (= 2.42.2-1), libuv1t64 (= 1.52.1-4), libx11-6 (= 2:1.8.13-1), libx11-data (= 2:1.8.13-1), libxau6 (= 1:1.0.11-1+b2), libxaw7 (= 2:1.0.16-1+b2), libxcb-render0 (= 1.17.0-2+b2), libxcb-shm0 (= 1.17.0-2+b2), libxcb1 (= 1.17.0-2+b2), libxdmcp6 (= 1:1.1.5-2+b1), libxext6 (= 2:1.3.4-1+b4), libxi6 (= 2:1.8.2-2+b1), libxml2-16 (= 2.15.3+dfsg-1), libxml2-dev (= 2.15.3+dfsg-1), libxmu6 (= 2:1.1.3-4+b1), libxpm4 (= 1:3.5.19-1), libxrender1 (= 1:0.9.12-1+b2), libxt6t64 (= 1:1.2.1-1.3+b2), libxxhash0 (= 0.8.3-2+b2), libznz-dev (= 3.0.1-9.1+b2), libznz3 (= 3.0.1-9.1+b2), libzstd-dev (= 1.5.7+dfsg-3+b2), libzstd1 (= 1.5.7+dfsg-3+b2), libzzip-0-13t64 (= 0.13.78+dfsg.1-0.2+b1), linux-libc-dev (= 7.0.13-1), m4 (= 1.4.21-1), make (= 4.4.1-3), man-db (= 2.13.1-1), mawk (= 1.3.4.20260302-1), ncurses-base (= 6.6+20251231-1), ncurses-bin (= 6.6+20251231-1+b1), nettle-dev (= 3.10.2-1+b1), openssl-provider-legacy (= 3.6.3-1), patch (= 2.8-2), perl (= 5.44.0~rc1-1), perl-base (= 5.44.0~rc1-1), perl-modules-5.44 (= 5.44.0~rc1-1), pkgconf (= 2.5.1-4), pkgconf-bin (= 2.5.1-4), po-debconf (= 1.0.22), procps (= 2:4.0.4-9+b2), rpcsvc-proto (= 1.4.4-1), sed (= 4.9-3), sensible-utils (= 0.0.26), sysvinit-utils (= 3.18-1), t1utils (= 1.41-4), tar (= 1.35+dfsg-4), tex-common (= 6.20), texlive-base (= 2026.20260527-3), texlive-binaries (= 2026.20260303.78225+ds-4), texlive-latex-base (= 2026.20260527-3), ucf (= 3.0056), util-linux (= 2.42.2-1), x11-common (= 1:7.7+26), xdg-utils (= 1.2.1-2), xz-utils (= 5.8.3-1), zlib1g (= 1:1.3.dfsg+really1.3.2-3), zlib1g-dev (= 1:1.3.dfsg+really1.3.2-3) Environment: DEB_BUILD_OPTIONS="parallel=2" LANG="C.UTF-8" LANGUAGE="en_GB:en" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" LD_LIBRARY_PATH="/usr/lib/libeatmydata" LD_PRELOAD="libeatmydata.so" SOURCE_DATE_EPOCH="1780128414" +------------------------------------------------------------------------------+ | Package contents Mon, 29 Jun 2026 08:20:34 +0000 | +------------------------------------------------------------------------------+ minc-tools-dbgsym_2.3.00+dfsg-17_amd64.deb ------------------------------------------ new Debian package, version 2.0. size 712008 bytes: control archive=2268 bytes. 1873 bytes, 12 lines control 4009 bytes, 38 lines md5sums Package: minc-tools-dbgsym Source: minc-tools Version: 2.3.00+dfsg-17 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian Med Packaging Team 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./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2026-05-30 08:06 ./usr/lib/debug/.dwz/x86_64-linux-gnu/ -rw-r--r-- root/root 13168 2026-05-30 08:06 ./usr/lib/debug/.dwz/x86_64-linux-gnu/minc-tools.debug drwxr-xr-x root/root 0 2026-05-30 08:06 ./usr/share/ drwxr-xr-x root/root 0 2026-05-30 08:06 ./usr/share/doc/ lrwxrwxrwx root/root 0 2026-05-30 08:06 ./usr/share/doc/minc-tools-dbgsym -> minc-tools minc-tools_2.3.00+dfsg-17_amd64.deb ----------------------------------- new Debian package, version 2.0. size 386644 bytes: control archive=3284 bytes. 1131 bytes, 21 lines control 6078 bytes, 97 lines md5sums Package: minc-tools Version: 2.3.00+dfsg-17 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 1495 Depends: libc6 (>= 2.34), libminc2-5.3.0t64 (>= 2.5.0), libnetcdf22 (>= 3.6.1), libniftiio2t64 (>= 3.0.1), netcdf-bin, libgetopt-tabular-perl, libtext-format-perl, imagemagick, sensible-utils Section: science Priority: optional Homepage: https://www.bic.mni.mcgill.ca/ServicesSoftware/HomePage Description: MNI medical image format tools This package contains tools to manipulate MINC files. . The Minc file format is a highly flexible medical image file format built on top of the NetCDF generalized data format. The format is simple, self-describing, extensible, portable and N-dimensional, with programming interfaces for both low-level data access and high-level volume manipulation. On top of the libraries is a suite of generic image-file manipulation tools. The format, libraries and tools are designed for use in a medical-imaging research environment: they are simple and powerful and make no attempt to provide a pretty interface to users. drwxr-xr-x root/root 0 2026-05-30 08:06 ./ drwxr-xr-x root/root 0 2026-05-30 08:06 ./usr/ drwxr-xr-x root/root 0 2026-05-30 08:06 ./usr/bin/ -rwxr-xr-x root/root 152296 2026-05-30 08:06 ./usr/bin/dcm2mnc -rwxr-xr-x root/root 48752 2026-05-30 08:06 ./usr/bin/ecattominc -rwxr-xr-x root/root 14632 2026-05-30 08:06 ./usr/bin/invert_raw_image -rwxr-xr-x root/root 14872 2026-05-30 08:06 ./usr/bin/minc_modify_header -rwxr-xr-x root/root 28544 2026-05-30 08:06 ./usr/bin/mincaverage -rwxr-xr-x root/root 23296 2026-05-30 08:06 ./usr/bin/mincblob -rwxr-xr-x root/root 66000 2026-05-30 08:06 ./usr/bin/minccalc -rwxr-xr-x root/root 23656 2026-05-30 08:06 ./usr/bin/minccmp -rwxr-xr-x root/root 36464 2026-05-30 08:06 ./usr/bin/mincconcat -rwxr-xr-x root/root 14832 2026-05-30 08:06 ./usr/bin/mincconvert -rwxr-xr-x 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./usr/share/man/man1/xfminvert.1.gz +------------------------------------------------------------------------------+ | Post Build Mon, 29 Jun 2026 08:20:34 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Mon, 29 Jun 2026 08:20:34 +0000 | +------------------------------------------------------------------------------+ Purging /build/minc-tools-dzBsiR Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Mon, 29 Jun 2026 08:20:36 +0000 | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: full Build-Space: 32096 Build-Time: 42 Distribution: perl-5.44-throwaway Host Architecture: amd64 Install-Time: 43 Job: /srv/debomatic/incoming/minc-tools_2.3.00+dfsg-17.dsc Machine Architecture: amd64 Package: minc-tools Package-Time: 92 Source-Version: 2.3.00+dfsg-17 Space: 32096 Status: successful Version: 2.3.00+dfsg-17 -------------------------------------------------------------------------------- Finished at 2026-06-29T08:20:33Z Build needed 00:01:32, 32096k disk space