sbuild (Debian sbuild) 0.91.9 (05 May 2026) on carme.larted.org.uk +==============================================================================+ | libbio-db-refseq-perl 1.7.4-2 (amd64) Sun, 28 Jun 2026 15:19:18 +0000 | +==============================================================================+ Package: libbio-db-refseq-perl Version: 1.7.4-2 Source Version: 1.7.4-2 Distribution: perl-5.44-throwaway Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: full I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... +------------------------------------------------------------------------------+ | Chroot Setup Commands Sun, 28 Jun 2026 15:19:18 +0000 | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup libbio-db-refseq-perl_1.7.4-2 perl-5.44-throwaway amd64 ------------------------------------------------------------------------------------------------------------------------------ I: Finished running '/usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup libbio-db-refseq-perl_1.7.4-2 perl-5.44-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- I: Setting up apt archive... +------------------------------------------------------------------------------+ | Update chroot Sun, 28 Jun 2026 15:19:19 +0000 | +------------------------------------------------------------------------------+ Get:1 file:/srv/reprepro perl-5.44 InRelease [3039 B] Get:1 file:/srv/reprepro perl-5.44 InRelease [3039 B] Get:2 http://deb.debian.org/debian unstable InRelease [189 kB] Get:3 http://deb.debian.org/debian sid InRelease [189 kB] Get:4 http://deb.debian.org/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:5 http://deb.debian.org/debian unstable/main amd64 Packages T-2026-06-28-1401.15-F-2026-06-28-1401.15.pdiff [33.3 kB] Get:6 http://deb.debian.org/debian sid/main Sources.diff/Index [63.6 kB] Get:5 http://deb.debian.org/debian unstable/main amd64 Packages T-2026-06-28-1401.15-F-2026-06-28-1401.15.pdiff [33.3 kB] Get:7 http://deb.debian.org/debian sid/main Sources T-2026-06-28-1401.15-F-2026-06-28-1401.15.pdiff [24.4 kB] Get:7 http://deb.debian.org/debian sid/main Sources T-2026-06-28-1401.15-F-2026-06-28-1401.15.pdiff [24.4 kB] Fetched 564 kB in 2s (279 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: sqv 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 683 kB of archives. After this operation, 157 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian unstable/main amd64 sqv amd64 1.4.0-1 [683 kB] Fetched 683 kB in 0s (55.7 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14526 files and directories currently installed.) Preparing to unpack .../archives/sqv_1.4.0-1_amd64.deb ... Unpacking sqv (1.4.0-1) over (1.3.0-5+b2) ... Setting up sqv (1.4.0-1) ... +------------------------------------------------------------------------------+ | Fetch source files Sun, 28 Jun 2026 15:19:22 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/debomatic/incoming/libbio-db-refseq-perl_1.7.4-2.dsc exists in /srv/debomatic/incoming; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Sun, 28 Jun 2026 15:19:23 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), build-essential, libbio-perl-perl, libtest-most-perl, libhttp-message-perl, libwww-perl, libtest-requiresinternet-perl, libtest-needs-perl, perl Filtered Build-Depends: debhelper-compat (= 12), build-essential, libbio-perl-perl, libtest-most-perl, libhttp-message-perl, libwww-perl, libtest-requiresinternet-perl, libtest-needs-perl, perl dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/libbio-db-refseq-perl-1kPYWj/resolver-7lwMtg/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/build/libbio-db-refseq-perl-1kPYWj/resolver-7lwMtg/apt_archive ./ InRelease Get:2 copy:/build/libbio-db-refseq-perl-1kPYWj/resolver-7lwMtg/apt_archive ./ Release [609 B] Ign:3 copy:/build/libbio-db-refseq-perl-1kPYWj/resolver-7lwMtg/apt_archive ./ Release.gpg Get:4 copy:/build/libbio-db-refseq-perl-1kPYWj/resolver-7lwMtg/apt_archive ./ Sources [749 B] Get:5 copy:/build/libbio-db-refseq-perl-1kPYWj/resolver-7lwMtg/apt_archive ./ Packages [768 B] Fetched 2126 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils ca-certificates debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libalgorithm-diff-perl libarchive-zip-perl libbio-perl-perl libcapture-tiny-perl libclass-data-inheritable-perl libclone-perl libdata-stag-perl libdebhelper-perl libdevel-stacktrace-perl libelf1t64 libencode-locale-perl libexception-class-perl libfile-listing-perl libfile-stripnondeterminism-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libio-html-perl libio-socket-ssl-perl libio-string-perl liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1t64 libnet-http-perl libnet-ssleay-perl libpipeline1 libsub-uplevel-perl libtest-deep-perl libtest-differences-perl libtest-exception-perl libtest-most-perl libtest-needs-perl libtest-requiresinternet-perl libtest-warn-perl libtext-diff-perl libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libwww-perl libwww-robotrules-perl libxml2-16 m4 man-db netbase openssl perl-openssl-defaults po-debconf sensible-utils Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev gnulib-l10n groff bioperl libxml-sax-expatxs-perl libbio-alignio-stockholm-perl libdata-dump-perl libcrypt-ssleay-perl libtool-doc gfortran | fortran95-compiler libsub-name-perl libbusiness-isbn-perl libmime-base32-perl libregexp-ipv6-perl libauthen-ntlm-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx python3:any libalgorithm-diff-xs-perl bioperl-run | libbio-perl-run-perl libace-perl libalgorithm-munkres-perl libarray-compare-perl libbio-asn1-entrezgene-perl libconvert-binary-c-perl libdbd-sqlite3-perl libdbd-mysql-perl libdbd-pg-perl libgraph-perl libgraphviz-perl libhtml-tableextract-perl liblist-moreutils-perl libpostscript-perl libset-scalar-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-perl libsvg-graph-perl libxml-dom-xpath-perl libxml-parser-perl libxml-sax-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl libxml-writer-perl libxml-libxml-perl libgd-perl libmldbm-perl libxml-libxslt-perl libxml-perl perl-tk libarchive-cpio-perl libhtml-format-perl libio-compress-brotli-perl libltdl-dev libdata-dump-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils ca-certificates debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libalgorithm-diff-perl libarchive-zip-perl libbio-perl-perl libcapture-tiny-perl libclass-data-inheritable-perl libclone-perl libdata-stag-perl libdebhelper-perl libdevel-stacktrace-perl libelf1t64 libencode-locale-perl libexception-class-perl libfile-listing-perl libfile-stripnondeterminism-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libio-html-perl libio-socket-ssl-perl libio-string-perl liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1t64 libnet-http-perl libnet-ssleay-perl libpipeline1 libsub-uplevel-perl libtest-deep-perl libtest-differences-perl libtest-exception-perl libtest-most-perl libtest-needs-perl libtest-requiresinternet-perl libtest-warn-perl libtext-diff-perl libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libwww-perl libwww-robotrules-perl libxml2-16 m4 man-db netbase openssl perl-openssl-defaults po-debconf sbuild-build-depends-main-dummy sensible-utils 0 upgraded, 71 newly installed, 0 to remove and 0 not upgraded. Need to get 17.9 MB/18.4 MB of archives. After this operation, 72.2 MB of additional disk space will be used. Get:1 file:/srv/reprepro perl-5.44/main amd64 libclone-perl amd64 0.50-1+b1 [21.8 kB] Get:2 copy:/build/libbio-db-refseq-perl-1kPYWj/resolver-7lwMtg/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [912 B] Get:3 file:/srv/reprepro perl-5.44/main amd64 libhtml-parser-perl amd64 3.83-2+b1 [99.4 kB] Get:4 http://deb.debian.org/debian unstable/main amd64 netbase all 6.5 [12.4 kB] Get:5 file:/srv/reprepro perl-5.44/main amd64 libnet-ssleay-perl amd64 1.96-1+b1 [345 kB] Get:6 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get:7 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.6.3-1 [1522 kB] Get:8 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20260601 [134 kB] Get:9 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.47-4 [345 kB] Get:10 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.47-4 [111 kB] Get:11 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.47-4 [43.0 kB] Get:12 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 1.0-1 [332 kB] Get:13 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-2+b2 [69.0 kB] Get:14 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.24.1-1 [1336 kB] Get:15 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.42.2-1 [100.0 kB] Get:16 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-3 [49.2 kB] Get:17 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get:18 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.21-1 [332 kB] Get:19 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.73-2 [516 kB] Get:20 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20240727.1+nmu1 [60.0 kB] Get:21 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.18.1-4 [877 kB] Get:22 http://deb.debian.org/debian unstable/main amd64 autopoint all 1.0-1 [820 kB] Get:23 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 14.2 [77.1 kB] Get:24 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-11 [539 kB] Get:25 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 22 [12.2 kB] Get:26 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:27 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.15.1-1 [17.1 kB] Get:28 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.15.1-1 [6020 B] Get:29 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.195-1 [58.1 kB] Get:30 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.16-4 [108 kB] Get:31 http://deb.debian.org/debian unstable/main amd64 libxml2-16 amd64 2.15.3+dfsg-1 [642 kB] Get:32 http://deb.debian.org/debian unstable/main amd64 gettext amd64 1.0-1 [2660 kB] Get:33 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:34 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.22 [216 kB] Get:35 http://deb.debian.org/debian unstable/main amd64 debhelper all 14.2 [933 kB] Get:36 http://deb.debian.org/debian unstable/main amd64 libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get:37 http://deb.debian.org/debian unstable/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:38 http://deb.debian.org/debian unstable/main amd64 libdata-stag-perl all 0.14-4 [440 kB] Get:39 http://deb.debian.org/debian unstable/main amd64 libbio-perl-perl all 1.7.8-4 [2498 kB] Get:40 http://deb.debian.org/debian unstable/main amd64 libcapture-tiny-perl all 0.50-1 [24.6 kB] Get:41 http://deb.debian.org/debian unstable/main amd64 libclass-data-inheritable-perl all 0.10-1 [8632 B] Get:42 http://deb.debian.org/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:43 http://deb.debian.org/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:44 http://deb.debian.org/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:45 http://deb.debian.org/debian unstable/main amd64 libtimedate-perl all 2.3500-1 [64.2 kB] Get:46 http://deb.debian.org/debian unstable/main amd64 libhttp-date-perl all 6.07-1 [11.7 kB] Get:47 http://deb.debian.org/debian unstable/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:48 http://deb.debian.org/debian unstable/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:49 http://deb.debian.org/debian unstable/main amd64 liburi-perl all 5.35-1 [112 kB] Get:50 http://deb.debian.org/debian unstable/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:51 http://deb.debian.org/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:52 http://deb.debian.org/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:53 http://deb.debian.org/debian unstable/main amd64 libhttp-message-perl all 7.02-1 [79.5 kB] Get:54 http://deb.debian.org/debian unstable/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:55 http://deb.debian.org/debian unstable/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:56 http://deb.debian.org/debian unstable/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get:57 http://deb.debian.org/debian unstable/main amd64 libio-socket-ssl-perl all 2.098-1 [229 kB] Get:58 http://deb.debian.org/debian unstable/main amd64 libnet-http-perl all 6.24-1 [23.2 kB] Get:59 http://deb.debian.org/debian unstable/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get:60 http://deb.debian.org/debian unstable/main amd64 libwww-robotrules-perl all 6.03-1 [15.8 kB] Get:61 http://deb.debian.org/debian unstable/main amd64 libwww-perl all 6.83-1 [186 kB] Get:62 http://deb.debian.org/debian unstable/main amd64 liblwp-protocol-https-perl all 6.15-1 [10.7 kB] Get:63 http://deb.debian.org/debian unstable/main amd64 libsub-uplevel-perl all 0.2800-3 [14.0 kB] Get:64 http://deb.debian.org/debian unstable/main amd64 libtest-deep-perl all 1.205-1 [52.3 kB] Get:65 http://deb.debian.org/debian unstable/main amd64 libtext-diff-perl all 1.45-2 [27.2 kB] Get:66 http://deb.debian.org/debian unstable/main amd64 libtest-differences-perl all 0.72-1 [17.7 kB] Get:67 http://deb.debian.org/debian unstable/main amd64 libtest-exception-perl all 0.43-3 [16.9 kB] Get:68 http://deb.debian.org/debian unstable/main amd64 libtest-warn-perl all 0.37-2 [14.5 kB] Get:69 http://deb.debian.org/debian unstable/main amd64 libtest-most-perl all 0.42-1 [23.9 kB] Get:70 http://deb.debian.org/debian unstable/main amd64 libtest-needs-perl all 0.002010-1 [9352 B] Get:71 http://deb.debian.org/debian unstable/main amd64 libtest-requiresinternet-perl all 0.05-4 [6864 B] Preconfiguring packages ... Fetched 17.9 MB in 0s (104 MB/s) Selecting previously unselected package netbase. (Reading database ... 14525 files and directories currently installed.) Preparing to unpack .../00-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package openssl. Preparing to unpack .../02-openssl_3.6.3-1_amd64.deb ... Unpacking openssl (3.6.3-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../03-ca-certificates_20260601_all.deb ... Unpacking ca-certificates (20260601) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../04-libmagic-mgc_1%3a5.47-4_amd64.deb ... Unpacking libmagic-mgc (1:5.47-4) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../05-libmagic1t64_1%3a5.47-4_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.47-4) ... Selecting previously unselected package file. Preparing to unpack .../06-file_1%3a5.47-4_amd64.deb ... Unpacking file (1:5.47-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../07-gettext-base_1.0-1_amd64.deb ... Unpacking gettext-base (1.0-1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../08-libuchardet0_0.0.8-2+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-2+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../09-groff-base_1.24.1-1_amd64.deb ... Unpacking groff-base (1.24.1-1) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../10-bsdextrautils_2.42.2-1_amd64.deb ... Unpacking bsdextrautils (2.42.2-1) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../11-libpipeline1_1.5.8-3_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-3) ... 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Selecting previously unselected package libio-html-perl. Preparing to unpack .../48-libio-html-perl_1.004-3_all.deb ... Unpacking libio-html-perl (1.004-3) ... Selecting previously unselected package liblwp-mediatypes-perl. Preparing to unpack .../49-liblwp-mediatypes-perl_6.04-2_all.deb ... Unpacking liblwp-mediatypes-perl (6.04-2) ... Selecting previously unselected package libhttp-message-perl. Preparing to unpack .../50-libhttp-message-perl_7.02-1_all.deb ... Unpacking libhttp-message-perl (7.02-1) ... Selecting previously unselected package libhttp-cookies-perl. Preparing to unpack .../51-libhttp-cookies-perl_6.11-1_all.deb ... Unpacking libhttp-cookies-perl (6.11-1) ... Selecting previously unselected package libhttp-negotiate-perl. Preparing to unpack .../52-libhttp-negotiate-perl_6.01-2_all.deb ... Unpacking libhttp-negotiate-perl (6.01-2) ... Selecting previously unselected package perl-openssl-defaults:amd64. 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Selecting previously unselected package libwww-perl. Preparing to unpack .../59-libwww-perl_6.83-1_all.deb ... Unpacking libwww-perl (6.83-1) ... Selecting previously unselected package liblwp-protocol-https-perl. Preparing to unpack .../60-liblwp-protocol-https-perl_6.15-1_all.deb ... Unpacking liblwp-protocol-https-perl (6.15-1) ... Selecting previously unselected package libsub-uplevel-perl. Preparing to unpack .../61-libsub-uplevel-perl_0.2800-3_all.deb ... Unpacking libsub-uplevel-perl (0.2800-3) ... Selecting previously unselected package libtest-deep-perl. Preparing to unpack .../62-libtest-deep-perl_1.205-1_all.deb ... Unpacking libtest-deep-perl (1.205-1) ... Selecting previously unselected package libtext-diff-perl. Preparing to unpack .../63-libtext-diff-perl_1.45-2_all.deb ... Unpacking libtext-diff-perl (1.45-2) ... Selecting previously unselected package libtest-differences-perl. Preparing to unpack .../64-libtest-differences-perl_0.72-1_all.deb ... Unpacking libtest-differences-perl (0.72-1) ... Selecting previously unselected package libtest-exception-perl. Preparing to unpack .../65-libtest-exception-perl_0.43-3_all.deb ... Unpacking libtest-exception-perl (0.43-3) ... Selecting previously unselected package libtest-warn-perl. Preparing to unpack .../66-libtest-warn-perl_0.37-2_all.deb ... Unpacking libtest-warn-perl (0.37-2) ... Selecting previously unselected package libtest-most-perl. Preparing to unpack .../67-libtest-most-perl_0.42-1_all.deb ... Unpacking libtest-most-perl (0.42-1) ... Selecting previously unselected package libtest-needs-perl. Preparing to unpack .../68-libtest-needs-perl_0.002010-1_all.deb ... Unpacking libtest-needs-perl (0.002010-1) ... Selecting previously unselected package libtest-requiresinternet-perl. Preparing to unpack .../69-libtest-requiresinternet-perl_0.05-4_all.deb ... Unpacking libtest-requiresinternet-perl (0.05-4) ... Selecting previously unselected package sbuild-build-depends-main-dummy. Preparing to unpack .../70-sbuild-build-depends-main-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.8-3) ... Setting up bsdextrautils (2.42.2-1) ... Setting up libtest-deep-perl (1.205-1) ... Setting up libmagic-mgc (1:5.47-4) ... Setting up libclone-perl:amd64 (0.50-1+b1) ... Setting up libalgorithm-diff-perl (1.201-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:amd64 (2.15.3+dfsg-1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdebhelper-perl (14.2) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libmagic1t64:amd64 (1:5.47-4) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up perl-openssl-defaults:amd64 (7+b2) ... Setting up gettext-base (1.0-1) ... Setting up m4 (1.4.21-1) ... Setting up libencode-locale-perl (1.05-3) ... Setting up file (1:5.47-4) ... Setting up libelf1t64:amd64 (0.195-1) ... Setting up libtest-needs-perl (0.002010-1) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20240727.1+nmu1) ... Setting up libclass-data-inheritable-perl (0.10-1) ... Setting up libtext-diff-perl (1.45-2) ... Setting up libio-html-perl (1.004-3) ... Setting up autopoint (1.0-1) ... Setting up autoconf (2.73-2) ... Setting up libcapture-tiny-perl (0.50-1) ... Setting up libtimedate-perl (2.3500-1) ... Setting up dwz (0.16-4) ... Setting up libdata-stag-perl (0.14-4) ... Setting up sensible-utils (0.0.26) ... Setting up libuchardet0:amd64 (0.0.8-2+b2) ... Setting up libsub-uplevel-perl (0.2800-3) ... Setting up netbase (6.5) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libbio-perl-perl (1.7.8-4) ... Setting up openssl (3.6.3-1) ... Setting up liburi-perl (5.35-1) ... Setting up libnet-ssleay-perl:amd64 (1.96-1+b1) ... Setting up automake (1:1.18.1-4) ... update-alternatives: using /usr/bin/automake-1.18 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.1-1) ... Setting up libhttp-date-perl (6.07-1) ... Setting up gettext (1.0-1) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libtest-requiresinternet-perl (0.05-4) ... Setting up libtool (2.5.4-11) ... Setting up libtest-warn-perl (0.37-2) ... Setting up libtest-differences-perl (0.72-1) ... Setting up libnet-http-perl (6.24-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (22) ... Setting up ca-certificates (20260601) ... Updating certificates in /etc/ssl/certs... 121 added, 0 removed; done. Setting up libtest-exception-perl (0.43-3) ... Setting up dh-strip-nondeterminism (1.15.1-1) ... Setting up libwww-robotrules-perl (6.03-1) ... Setting up groff-base (1.24.1-1) ... Setting up libhtml-parser-perl:amd64 (3.83-2+b1) ... Setting up libio-socket-ssl-perl (2.098-1) ... Setting up libhttp-message-perl (7.02-1) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libtest-most-perl (0.42-1) ... Setting up po-debconf (1.0.22) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (14.2) ... Setting up liblwp-protocol-https-perl (6.15-1) ... Setting up libwww-perl (6.83-1) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.42-17) ... Processing triggers for ca-certificates (20260601) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. +------------------------------------------------------------------------------+ | Check architectures Sun, 28 Jun 2026 15:19:31 +0000 | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in all) +------------------------------------------------------------------------------+ | Build environment Sun, 28 Jun 2026 15:19:31 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 7.0.10+deb14-amd64 #1 SMP PREEMPT_DYNAMIC Debian 7.0.10-1 (2026-05-27) amd64 (x86_64) Toolchain package versions: binutils_2.46.50.20260617-1 dpkg-dev_1.23.7 g++-15_15.3.0-1 gcc-15_15.3.0-1 libc6-dev_2.42-17 libstdc++-15-dev_15.3.0-1 libstdc++6_16.1.0-2 linux-libc-dev_7.0.13-1 Package versions: apt_3.3.1 autoconf_2.73-2 automake_1:1.18.1-4 autopoint_1.0-1 autotools-dev_20240727.1+nmu1 base-files_14.2 base-passwd_3.6.8 bash_5.3-3 binutils_2.46.50.20260617-1 binutils-common_2.46.50.20260617-1 binutils-x86-64-linux-gnu_2.46.50.20260617-1 bsdextrautils_2.42.2-1 build-essential_12.12 bzip2_1.0.8-6+b2 ca-certificates_20260601 coreutils_9.10-1 cpp_4:15.2.0-5+b1 cpp-15_15.3.0-1 cpp-15-x86-64-linux-gnu_15.3.0-1 cpp-x86-64-linux-gnu_4:15.2.0-5+b1 dash_0.5.12-12 debconf_1.5.92 debhelper_14.2 debian-archive-keyring_2025.1 debianutils_5.23.2 dh-autoreconf_22 dh-strip-nondeterminism_1.15.1-1 diffutils_1:3.12-1 dirmngr_2.4.9-5 dpkg_1.23.7 dpkg-dev_1.23.7 dwz_0.16-4 eatmydata_131-2 file_1:5.47-4 findutils_4.10.0-4 g++_4:15.2.0-5+b1 g++-15_15.3.0-1 g++-15-x86-64-linux-gnu_15.3.0-1 g++-x86-64-linux-gnu_4:15.2.0-5+b1 gcc_4:15.2.0-5+b1 gcc-15_15.3.0-1 gcc-15-base_15.3.0-1 gcc-15-x86-64-linux-gnu_15.3.0-1 gcc-16-base_16.1.0-2 gcc-x86-64-linux-gnu_4:15.2.0-5+b1 gettext_1.0-1 gettext-base_1.0-1 gnupg_2.4.9-5 gnupg-l10n_2.4.9-5 gpg_2.4.9-5 gpg-agent_2.4.9-5 gpgconf_2.4.9-5 gpgsm_2.4.9-5 grep_3.12-1 groff-base_1.24.1-1 gzip_1.13-1 hostname_3.25 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-3 libalgorithm-diff-perl_1.201-1 libapt-pkg7.0_3.3.1 libarchive-zip-perl_1.68-1 libasan8_16.1.0-2 libassuan9_3.0.2-2+b2 libatomic1_16.1.0-2 libattr1_1:2.5.2-4 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1+b1 libbinutils_2.46.50.20260617-1 libbio-perl-perl_1.7.8-4 libblkid1_2.42.2-1 libbz2-1.0_1.0.8-6+b2 libc-bin_2.42-17 libc-dev-bin_2.42-17 libc-gconv-modules-extra_2.42-17 libc6_2.42-17 libc6-dev_2.42-17 libcap-ng0_0.9.3-1 libcapture-tiny-perl_0.50-1 libcc1-0_16.1.0-2 libclass-data-inheritable-perl_0.10-1 libclone-perl_0.50-1+b1 libcrypt1_1:4.5.1-1+b1 libctf-nobfd0_2.46.50.20260617-1 libctf0_2.46.50.20260617-1 libdata-stag-perl_0.14-4 libdb5.3t64_5.3.28+dfsg2-11+b1 libdebconfclient0_0.283 libdebhelper-perl_14.2 libdevel-stacktrace-perl_2.0500-1 libdpkg-perl_1.23.7 libeatmydata1_131-2+b2 libelf1t64_0.195-1 libencode-locale-perl_1.05-3 libexception-class-perl_1.45-1 libffi8_3.5.2-4 libfile-listing-perl_6.16-1 libfile-stripnondeterminism-perl_1.15.1-1 libgcc-15-dev_15.3.0-1 libgcc-s1_16.1.0-2 libgcrypt20_1.12.2-1 libgdbm-compat4t64_1.26-1+b2 libgdbm6t64_1.26-1+b2 libgmp10_2:6.3.0+dfsg-5+b2 libgnutls30t64_3.8.13-1 libgomp1_16.1.0-2 libgpg-error0_1.61-3 libgprofng0_2.46.50.20260617-1 libhogweed6t64_3.10.2-1+b1 libhtml-parser-perl_3.83-2+b1 libhtml-tagset-perl_3.24-1 libhtml-tree-perl_5.07-3 libhttp-cookies-perl_6.11-1 libhttp-date-perl_6.07-1 libhttp-message-perl_7.02-1 libhttp-negotiate-perl_6.01-2 libhwasan0_16.1.0-2 libidn2-0_2.3.8-5 libio-html-perl_1.004-3 libio-socket-ssl-perl_2.098-1 libio-string-perl_1.08-4 libisl23_0.27-2 libitm1_16.1.0-2 libjansson4_2.15.0-1 libksba8_1.8.0-3 libldap2_2.6.13+dfsg-1+b1 liblsan0_16.1.0-2 liblwp-mediatypes-perl_6.04-2 liblwp-protocol-https-perl_6.15-1 liblz4-1_1.10.0-10 liblzma5_5.8.3-1 libmagic-mgc_1:5.47-4 libmagic1t64_1:5.47-4 libmd0_1.2.0-2 libmount1_2.42.2-1 libmpc3_1.3.1-3 libmpfr6_4.2.2-3 libncursesw6_6.6+20251231-1+b1 libnet-http-perl_6.24-1 libnet-ssleay-perl_1.96-1+b1 libnettle8t64_3.10.2-1+b1 libnpth0t64_1.8-3+b2 libp11-kit0_0.26.2-3 libpam-modules_1.7.0-6 libpam-modules-bin_1.7.0-6 libpam-runtime_1.7.0-6 libpam0g_1.7.0-6 libpcre2-8-0_10.46-1+b2 libperl5.40_5.40.1-8 libperl5.44_5.44.0~rc1-1 libpipeline1_1.5.8-3 libquadmath0_16.1.0-2 libreadline8t64_8.3-4 libsasl2-2_2.1.28+dfsg1-11 libsasl2-modules-db_2.1.28+dfsg1-11 libseccomp2_2.6.0-2+b1 libselinux1_3.10-1 libsframe3_2.46.50.20260617-1 libsmartcols1_2.42.2-1 libsqlite3-0_3.53.3-1 libssl3t64_3.6.3-1 libstdc++-15-dev_15.3.0-1 libstdc++6_16.1.0-2 libsub-uplevel-perl_0.2800-3 libsystemd0_261.1-2 libtasn1-6_4.21.0-2+b1 libtest-deep-perl_1.205-1 libtest-differences-perl_0.72-1 libtest-exception-perl_0.43-3 libtest-most-perl_0.42-1 libtest-needs-perl_0.002010-1 libtest-requiresinternet-perl_0.05-4 libtest-warn-perl_0.37-2 libtext-diff-perl_1.45-2 libtimedate-perl_2.3500-1 libtinfo6_6.6+20251231-1+b1 libtool_2.5.4-11 libtry-tiny-perl_0.32-1 libtsan2_16.1.0-2 libubsan1_16.1.0-2 libuchardet0_0.0.8-2+b2 libudev1_261.1-2 libunistring5_1.4.2-1 liburi-perl_5.35-1 libuuid1_2.42.2-1 libwww-perl_6.83-1 libwww-robotrules-perl_6.03-1 libxml2-16_2.15.3+dfsg-1 libxxhash0_0.8.3-2+b2 libzstd1_1.5.7+dfsg-3+b2 linux-libc-dev_7.0.13-1 m4_1.4.21-1 make_4.4.1-3 man-db_2.13.1-1 mawk_1.3.4.20260302-1 ncurses-base_6.6+20251231-1 ncurses-bin_6.6+20251231-1+b1 netbase_6.5 openssl_3.6.3-1 openssl-provider-legacy_3.6.3-1 patch_2.8-2 perl_5.44.0~rc1-1 perl-base_5.44.0~rc1-1 perl-modules-5.40_5.40.1-8 perl-modules-5.44_5.44.0~rc1-1 perl-openssl-defaults_7+b2 pinentry-curses_1.3.2-4 po-debconf_1.0.22 readline-common_8.3-4 rpcsvc-proto_1.4.4-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-3 sensible-utils_0.0.26 sqv_1.4.0-1 sysvinit-utils_3.18-1 tar_1.35+dfsg-4 util-linux_2.42.2-1 xz-utils_5.8.3-1 zlib1g_1:1.3.dfsg+really1.3.2-3 +------------------------------------------------------------------------------+ | Build Sun, 28 Jun 2026 15:19:31 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libbio-db-refseq-perl Binary: libbio-db-refseq-perl Architecture: all Version: 1.7.4-2 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe Homepage: https://metacpan.org/release/Bio-DB-RefSeq Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/libbio-db-refseq-perl Vcs-Git: https://salsa.debian.org/med-team/libbio-db-refseq-perl.git Testsuite: autopkgtest-pkg-perl Build-Depends: debhelper-compat (= 12) Build-Depends-Indep: libbio-perl-perl, libtest-most-perl, libhttp-message-perl, libwww-perl, libtest-requiresinternet-perl, libtest-needs-perl, perl Package-List: libbio-db-refseq-perl deb perl optional arch=all Checksums-Sha1: 3f19baaa6b61630152b8d4973ed32adb720cc786 13741 libbio-db-refseq-perl_1.7.4.orig.tar.gz a477148f9407a7a36bc32cf2e0042dbe2744ff82 2008 libbio-db-refseq-perl_1.7.4-2.debian.tar.xz Checksums-Sha256: f3f4e44827cc86af9c2486c63935474951fde7f8647d2edc0c3a18c23640feab 13741 libbio-db-refseq-perl_1.7.4.orig.tar.gz bd5fe927dd3009ff6f85f8a084b514c1c67c3dbb2b416e066013d141707a85cf 2008 libbio-db-refseq-perl_1.7.4-2.debian.tar.xz Files: 0cfdbfd77e868e39387a7014094b9d58 13741 libbio-db-refseq-perl_1.7.4.orig.tar.gz 5991c511ea92a6400d782901dea9ffa3 2008 libbio-db-refseq-perl_1.7.4-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEEj23hBDd/OxHnQXSHMfMURUShdBoFAmgE014RHHRjaGV0QGRl Ymlhbi5vcmcACgkQMfMURUShdBqH6BAAh2J2ZHCCKaTcwPBZE/bo3ueqseXeTzj/ xRQh3xOjyTZfhs3r7H+cynqwTzDNRxs4Ctkqw7ahH78cfKd/+rP16UIlUIfxBJDp NCTJg0xI2bJrGBzKaZWem+Jf6nbHuh8wsUEVap7LxtHMnsVc3cKOIFvovhGiMtaV VtHPp9IeoBE1YYp2MRzlD5502Ceua3JQJyGdp25KtrOLOS7tP4B3ircoEotWW64c Cupa0nEc9Oc4QALFztdGmTAoXivusj9Ss6c1AgV4kDZjbyWCxZM82nPYBJ6pWwRK rEowuDvdsw656qSXUlWu71zu71kJOHqbcqEfFnmYnLuXyHLrGbogLtE8QGBzzyjP QKDBXfgVKhrRGvIN66xFYPbVTxD8ufD/b1Wfrjd98eAhPI0l/kPFFgHVA5msw3ZV 5N/xHwYrf8t75yaJHWBhfcwOTSO0KdFWBHzpdSSYD7VRDrQFoog5amv+viBgh9/l WM8wmm2j0HAt3vphz5X1cEh5Tj4bpwnMKC1eHO47OeEXKXW4x+TSovJfDwEslwRp ugXLnF2hcA1lBcnCx+cHV9T1nOpL8z9j9zeZZcmmf2fO+nJIIEZFtGXfydwmO/f2 L4S3a03jn7TWBeoSkml7YOx45jZGQezhCa955/QDyYZ042VPKYABpCO9y/lA8tQk wsfWza+0tto= =zGBu -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./libbio-db-refseq-perl_1.7.4-2.dsc: missing OpenPGP keyrings dpkg-source: info: verifying ./libbio-db-refseq-perl_1.7.4-2.dsc dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-keyring.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-tag2upload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-nonupload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting libbio-db-refseq-perl in /build/libbio-db-refseq-perl-1kPYWj/libbio-db-refseq-perl-1.7.4 dpkg-source: info: unpacking libbio-db-refseq-perl_1.7.4.orig.tar.gz dpkg-source: info: unpacking libbio-db-refseq-perl_1.7.4-2.debian.tar.xz clean up apt cache ------------------ Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Time Build Commands Sun, 28 Jun 2026 15:19:32 +0000 | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/starting-build-commands/no-network libbio-db-refseq-perl_1.7.4-2 perl-5.44-throwaway amd64 ------------------------------------------------------------------------------------------------------------------------------ I: Finished running '/usr/share/debomatic/sbuildcommands/starting-build-commands/no-network libbio-db-refseq-perl_1.7.4-2 perl-5.44-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANGUAGE=en_GB:en LC_ALL=C.UTF-8 LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so LOGNAME=debomatic PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/build/libbio-db-refseq-perl-1kPYWj/libbio-db-refseq-perl-1.7.4 SCHROOT_ALIAS_NAME=perl-5.44-throwaway-amd64-debomatic SCHROOT_CHROOT_NAME=perl-5.44-amd64-debomatic SCHROOT_COMMAND=env SCHROOT_GID=110 SCHROOT_GROUP=sbuild SCHROOT_SESSION_ID=perl-5.44-amd64-debomatic-94112f84-273d-4bb0-8773-3918e9d92a4b SCHROOT_UID=1002 SCHROOT_USER=debomatic SHELL=/bin/sh USER=debomatic dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -Zxz dpkg-buildpackage: info: source package libbio-db-refseq-perl dpkg-buildpackage: info: source version 1.7.4-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Alexandre Detiste dpkg-source -Zxz --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean dpkg-source -Zxz -b . dpkg-source: info: using source format '3.0 (quilt)' dpkg-source: info: building libbio-db-refseq-perl using existing ../libbio-db-refseq-perl_1.7.4.orig.tar.gz dpkg-source: info: building libbio-db-refseq-perl in ../libbio-db-refseq-perl_1.7.4-2.debian.tar.xz dpkg-source: info: building libbio-db-refseq-perl in ../libbio-db-refseq-perl_1.7.4-2.dsc debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure /usr/bin/perl Makefile.PL INSTALLDIRS=vendor OPTIMIZE="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/libbio-db-refseq-perl-1kPYWj/libbio-db-refseq-perl-1.7.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2" LD="x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/libbio-db-refseq-perl-1kPYWj/libbio-db-refseq-perl-1.7.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro" Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Bio::DB::RefSeq Writing MYMETA.yml and MYMETA.json dh_auto_build make -j2 make[1]: Entering directory '/build/libbio-db-refseq-perl-1kPYWj/libbio-db-refseq-perl-1.7.4' cp lib/Bio/DB/RefSeq.pm blib/lib/Bio/DB/RefSeq.pm Manifying 1 pod document make[1]: Leaving directory '/build/libbio-db-refseq-perl-1kPYWj/libbio-db-refseq-perl-1.7.4' dh_auto_test make -j2 test TEST_VERBOSE=1 make[1]: Entering directory '/build/libbio-db-refseq-perl-1kPYWj/libbio-db-refseq-perl-1.7.4' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/00-compile.t ........... 1..1 ok 1 - Bio/DB/RefSeq.pm loaded ok ok t/author-mojibake.t ...... skipped: these tests are for testing by the author t/author-pod-coverage.t .. skipped: these tests are for testing by the author t/author-pod-syntax.t .... skipped: these tests are for testing by the author t/RefSeq.t ............... ok 1 ok 2 ok 3 ok 4 ok 5 ok 6 1..6 ok All tests successful. Files=5, Tests=7, 1 wallclock secs ( 0.02 usr 0.01 sys + 0.28 cusr 0.06 csys = 0.37 CPU) Result: PASS make[1]: Leaving directory '/build/libbio-db-refseq-perl-1kPYWj/libbio-db-refseq-perl-1.7.4' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/libbio-db-refseq-perl/ make -j2 install DESTDIR=/build/libbio-db-refseq-perl-1kPYWj/libbio-db-refseq-perl-1.7.4/debian/libbio-db-refseq-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/libbio-db-refseq-perl-1kPYWj/libbio-db-refseq-perl-1.7.4' Manifying 1 pod document Installing /build/libbio-db-refseq-perl-1kPYWj/libbio-db-refseq-perl-1.7.4/debian/libbio-db-refseq-perl/usr/share/perl5/Bio/DB/RefSeq.pm Installing /build/libbio-db-refseq-perl-1kPYWj/libbio-db-refseq-perl-1.7.4/debian/libbio-db-refseq-perl/usr/share/man/man3/Bio::DB::RefSeq.3pm make[1]: Leaving directory '/build/libbio-db-refseq-perl-1kPYWj/libbio-db-refseq-perl-1.7.4' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libbio-db-refseq-perl' in '../libbio-db-refseq-perl_1.7.4-2_all.deb'. dpkg-genbuildinfo -O../libbio-db-refseq-perl_1.7.4-2_amd64.buildinfo dpkg-genchanges -O../libbio-db-refseq-perl_1.7.4-2_amd64.changes dpkg-genchanges: info: not including original source code in upload dpkg-source -Zxz --after-build . dpkg-buildpackage: info: binary and diff upload (original source NOT included) -------------------------------------------------------------------------------- Build finished at 2026-06-28T15:19:36Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Sun, 28 Jun 2026 15:19:36 +0000 | +------------------------------------------------------------------------------+ libbio-db-refseq-perl_1.7.4-2_amd64.changes: -------------------------------------------- Format: 1.8 Date: Sun, 20 Apr 2025 12:45:44 +0200 Source: libbio-db-refseq-perl Binary: libbio-db-refseq-perl Architecture: source all Version: 1.7.4-2 Distribution: perl-5.44-throwaway Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Alexandre Detiste Description: libbio-db-refseq-perl - Database object interface for RefSeq retrieval Changes: libbio-db-refseq-perl (1.7.4-2) unstable; urgency=medium . * Team Upload * Bump Standards-version to 4.7.2 . [ Andreas Tille ] * Fix maintainer address Checksums-Sha1: 87fd6153b46cb3e5005f67a2bd678d01eaac9b8f 1359 libbio-db-refseq-perl_1.7.4-2.dsc d855539e662c0eae06348fa05eb61792513acf0b 2008 libbio-db-refseq-perl_1.7.4-2.debian.tar.xz 97ed9a3c0c57b85c77ded754f52cd46b770e1e05 7436 libbio-db-refseq-perl_1.7.4-2_all.deb 54f94be5ae50b4ecb0b91eef0eadc44398484ab2 6407 libbio-db-refseq-perl_1.7.4-2_amd64.buildinfo Checksums-Sha256: cec29783c1bd5b2e0b6ab60b09de48342844a5d84ebe1ab72db3aa44f0936cbc 1359 libbio-db-refseq-perl_1.7.4-2.dsc 1475c79869c94c2b8be504520d2dbfe5fdb20025a0205475aa4b1f7f6e694f7a 2008 libbio-db-refseq-perl_1.7.4-2.debian.tar.xz 2ca04b0cbf6c99500704f008d00be77b816e428ba83103194c2f2bb6c7ac1fdf 7436 libbio-db-refseq-perl_1.7.4-2_all.deb 4bc55df92debffb30d5cd8c1c9343a65f7216ab380efb49480ee1485f53a835b 6407 libbio-db-refseq-perl_1.7.4-2_amd64.buildinfo Files: 3051ece1815ad70adcd454a08626298e 1359 perl optional libbio-db-refseq-perl_1.7.4-2.dsc f7546bb18fbc98182c9cd9c628b3cf47 2008 perl optional libbio-db-refseq-perl_1.7.4-2.debian.tar.xz bd5fe026cc70b0f16d9646b5ff32012a 7436 perl optional libbio-db-refseq-perl_1.7.4-2_all.deb ff643151931849a6a8f9ca0773486709 6407 perl optional libbio-db-refseq-perl_1.7.4-2_amd64.buildinfo +------------------------------------------------------------------------------+ | Buildinfo Sun, 28 Jun 2026 15:19:36 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: libbio-db-refseq-perl Binary: libbio-db-refseq-perl Architecture: all source Version: 1.7.4-2 Checksums-Md5: 3051ece1815ad70adcd454a08626298e 1359 libbio-db-refseq-perl_1.7.4-2.dsc bd5fe026cc70b0f16d9646b5ff32012a 7436 libbio-db-refseq-perl_1.7.4-2_all.deb Checksums-Sha1: 87fd6153b46cb3e5005f67a2bd678d01eaac9b8f 1359 libbio-db-refseq-perl_1.7.4-2.dsc 97ed9a3c0c57b85c77ded754f52cd46b770e1e05 7436 libbio-db-refseq-perl_1.7.4-2_all.deb Checksums-Sha256: cec29783c1bd5b2e0b6ab60b09de48342844a5d84ebe1ab72db3aa44f0936cbc 1359 libbio-db-refseq-perl_1.7.4-2.dsc 2ca04b0cbf6c99500704f008d00be77b816e428ba83103194c2f2bb6c7ac1fdf 7436 libbio-db-refseq-perl_1.7.4-2_all.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sun, 28 Jun 2026 15:19:35 +0000 Build-Path: /build/libbio-db-refseq-perl-1kPYWj/libbio-db-refseq-perl-1.7.4 Build-Tainted-By: usr-local-has-programs Installed-Build-Depends: autoconf (= 2.73-2), automake (= 1:1.18.1-4), autopoint (= 1.0-1), autotools-dev (= 20240727.1+nmu1), base-files (= 14.2), base-passwd (= 3.6.8), bash (= 5.3-3), binutils (= 2.46.50.20260617-1), binutils-common (= 2.46.50.20260617-1), binutils-x86-64-linux-gnu (= 2.46.50.20260617-1), bsdextrautils (= 2.42.2-1), build-essential (= 12.12), bzip2 (= 1.0.8-6+b2), ca-certificates (= 20260601), coreutils (= 9.10-1), cpp (= 4:15.2.0-5+b1), cpp-15 (= 15.3.0-1), cpp-15-x86-64-linux-gnu (= 15.3.0-1), cpp-x86-64-linux-gnu (= 4:15.2.0-5+b1), dash (= 0.5.12-12), debconf (= 1.5.92), debhelper (= 14.2), debianutils (= 5.23.2), dh-autoreconf (= 22), dh-strip-nondeterminism (= 1.15.1-1), diffutils (= 1:3.12-1), dpkg (= 1.23.7), dpkg-dev (= 1.23.7), dwz (= 0.16-4), file (= 1:5.47-4), findutils (= 4.10.0-4), g++ (= 4:15.2.0-5+b1), g++-15 (= 15.3.0-1), g++-15-x86-64-linux-gnu (= 15.3.0-1), g++-x86-64-linux-gnu (= 4:15.2.0-5+b1), gcc (= 4:15.2.0-5+b1), gcc-15 (= 15.3.0-1), gcc-15-base (= 15.3.0-1), gcc-15-x86-64-linux-gnu (= 15.3.0-1), gcc-16-base (= 16.1.0-2), gcc-x86-64-linux-gnu (= 4:15.2.0-5+b1), gettext (= 1.0-1), gettext-base (= 1.0-1), grep (= 3.12-1), groff-base (= 1.24.1-1), gzip (= 1.13-1), hostname (= 3.25), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-3), libalgorithm-diff-perl (= 1.201-1), libarchive-zip-perl (= 1.68-1), libasan8 (= 16.1.0-2), libatomic1 (= 16.1.0-2), libattr1 (= 1:2.5.2-4), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1+b1), libbinutils (= 2.46.50.20260617-1), libbio-perl-perl (= 1.7.8-4), libblkid1 (= 2.42.2-1), libbz2-1.0 (= 1.0.8-6+b2), libc-bin (= 2.42-17), libc-dev-bin (= 2.42-17), libc-gconv-modules-extra (= 2.42-17), libc6 (= 2.42-17), libc6-dev (= 2.42-17), libcap-ng0 (= 0.9.3-1), libcapture-tiny-perl (= 0.50-1), libcc1-0 (= 16.1.0-2), libclass-data-inheritable-perl (= 0.10-1), libclone-perl (= 0.50-1+b1), libcrypt1 (= 1:4.5.1-1+b1), libctf-nobfd0 (= 2.46.50.20260617-1), libctf0 (= 2.46.50.20260617-1), libdata-stag-perl (= 0.14-4), libdb5.3t64 (= 5.3.28+dfsg2-11+b1), libdebconfclient0 (= 0.283), libdebhelper-perl (= 14.2), libdevel-stacktrace-perl (= 2.0500-1), libdpkg-perl (= 1.23.7), libelf1t64 (= 0.195-1), libencode-locale-perl (= 1.05-3), libexception-class-perl (= 1.45-1), libfile-listing-perl (= 6.16-1), libfile-stripnondeterminism-perl (= 1.15.1-1), libgcc-15-dev (= 15.3.0-1), libgcc-s1 (= 16.1.0-2), libgdbm-compat4t64 (= 1.26-1+b2), libgdbm6t64 (= 1.26-1+b2), libgmp10 (= 2:6.3.0+dfsg-5+b2), libgomp1 (= 16.1.0-2), libgprofng0 (= 2.46.50.20260617-1), libhtml-parser-perl (= 3.83-2+b1), libhtml-tagset-perl (= 3.24-1), libhtml-tree-perl (= 5.07-3), libhttp-cookies-perl (= 6.11-1), libhttp-date-perl (= 6.07-1), libhttp-message-perl (= 7.02-1), libhttp-negotiate-perl (= 6.01-2), libhwasan0 (= 16.1.0-2), libio-html-perl (= 1.004-3), libio-socket-ssl-perl (= 2.098-1), libio-string-perl (= 1.08-4), libisl23 (= 0.27-2), libitm1 (= 16.1.0-2), libjansson4 (= 2.15.0-1), liblsan0 (= 16.1.0-2), liblwp-mediatypes-perl (= 6.04-2), liblwp-protocol-https-perl (= 6.15-1), liblzma5 (= 5.8.3-1), libmagic-mgc (= 1:5.47-4), libmagic1t64 (= 1:5.47-4), libmd0 (= 1.2.0-2), libmount1 (= 2.42.2-1), libmpc3 (= 1.3.1-3), libmpfr6 (= 4.2.2-3), libnet-http-perl (= 6.24-1), libnet-ssleay-perl (= 1.96-1+b1), libpam-modules (= 1.7.0-6), libpam-modules-bin (= 1.7.0-6), libpam-runtime (= 1.7.0-6), libpam0g (= 1.7.0-6), libpcre2-8-0 (= 10.46-1+b2), libperl5.44 (= 5.44.0~rc1-1), libpipeline1 (= 1.5.8-3), libquadmath0 (= 16.1.0-2), libseccomp2 (= 2.6.0-2+b1), libselinux1 (= 3.10-1), libsframe3 (= 2.46.50.20260617-1), libsmartcols1 (= 2.42.2-1), libssl3t64 (= 3.6.3-1), libstdc++-15-dev (= 15.3.0-1), libstdc++6 (= 16.1.0-2), libsub-uplevel-perl (= 0.2800-3), libsystemd0 (= 261.1-2), libtest-deep-perl (= 1.205-1), libtest-differences-perl (= 0.72-1), libtest-exception-perl (= 0.43-3), libtest-most-perl (= 0.42-1), libtest-needs-perl (= 0.002010-1), libtest-requiresinternet-perl (= 0.05-4), libtest-warn-perl (= 0.37-2), libtext-diff-perl (= 1.45-2), libtimedate-perl (= 2.3500-1), libtinfo6 (= 6.6+20251231-1+b1), libtool (= 2.5.4-11), libtry-tiny-perl (= 0.32-1), libtsan2 (= 16.1.0-2), libubsan1 (= 16.1.0-2), libuchardet0 (= 0.0.8-2+b2), libudev1 (= 261.1-2), libunistring5 (= 1.4.2-1), liburi-perl (= 5.35-1), libuuid1 (= 2.42.2-1), libwww-perl (= 6.83-1), libwww-robotrules-perl (= 6.03-1), libxml2-16 (= 2.15.3+dfsg-1), libzstd1 (= 1.5.7+dfsg-3+b2), linux-libc-dev (= 7.0.13-1), m4 (= 1.4.21-1), make (= 4.4.1-3), man-db (= 2.13.1-1), mawk (= 1.3.4.20260302-1), ncurses-base (= 6.6+20251231-1), ncurses-bin (= 6.6+20251231-1+b1), netbase (= 6.5), openssl (= 3.6.3-1), openssl-provider-legacy (= 3.6.3-1), patch (= 2.8-2), perl (= 5.44.0~rc1-1), perl-base (= 5.44.0~rc1-1), perl-modules-5.44 (= 5.44.0~rc1-1), perl-openssl-defaults (= 7+b2), po-debconf (= 1.0.22), rpcsvc-proto (= 1.4.4-1), sed (= 4.9-3), sensible-utils (= 0.0.26), sysvinit-utils (= 3.18-1), tar (= 1.35+dfsg-4), util-linux (= 2.42.2-1), xz-utils (= 5.8.3-1), zlib1g (= 1:1.3.dfsg+really1.3.2-3) Environment: DEB_BUILD_OPTIONS="parallel=2" LANG="C.UTF-8" LANGUAGE="en_GB:en" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" LD_LIBRARY_PATH="/usr/lib/libeatmydata" LD_PRELOAD="libeatmydata.so" SOURCE_DATE_EPOCH="1745145944" +------------------------------------------------------------------------------+ | Package contents Sun, 28 Jun 2026 15:19:36 +0000 | +------------------------------------------------------------------------------+ libbio-db-refseq-perl_1.7.4-2_all.deb ------------------------------------- new Debian package, version 2.0. size 7436 bytes: control archive=1040 bytes. 1031 bytes, 25 lines control 396 bytes, 5 lines md5sums Package: libbio-db-refseq-perl Version: 1.7.4-2 Architecture: all Maintainer: Debian Med Packaging Team Installed-Size: 23 Depends: perl:any, libhttp-message-perl, libwww-perl, libbio-perl-perl Breaks: libbio-perl-perl (<< 1.7.3) Replaces: libbio-perl-perl (<< 1.7.3) Section: perl Priority: optional Homepage: https://metacpan.org/release/Bio-DB-RefSeq Description: Database object interface for RefSeq retrieval Allows the dynamic retrieval of sequence objects Bio::Seq from the RefSeq nucleotide database using the dbfetch script at EBI: . http://www.ebi.ac.uk/Tools/dbfetch/dbfetch . At this time the module specifically retrieves nucleotide sequences only. . In order to make changes transparent host type (currently only ebi) and location (defaults to ebi) were separated out. This allows later additions of more servers in different geographical locations. . The functionality of this module is inherited from Bio::DB::DBFetch which implements Bio::DB::WebDBSeqI. drwxr-xr-x root/root 0 2025-04-20 10:45 ./ drwxr-xr-x root/root 0 2025-04-20 10:45 ./usr/ drwxr-xr-x root/root 0 2025-04-20 10:45 ./usr/share/ drwxr-xr-x root/root 0 2025-04-20 10:45 ./usr/share/doc/ drwxr-xr-x root/root 0 2025-04-20 10:45 ./usr/share/doc/libbio-db-refseq-perl/ -rw-r--r-- root/root 384 2025-04-20 10:45 ./usr/share/doc/libbio-db-refseq-perl/changelog.Debian.gz -rw-r--r-- root/root 282 2019-12-07 22:09 ./usr/share/doc/libbio-db-refseq-perl/changelog.gz -rw-r--r-- root/root 1156 2024-11-17 18:05 ./usr/share/doc/libbio-db-refseq-perl/copyright drwxr-xr-x root/root 0 2025-04-20 10:45 ./usr/share/man/ drwxr-xr-x root/root 0 2025-04-20 10:45 ./usr/share/man/man3/ -rw-r--r-- root/root 2434 2025-04-20 10:45 ./usr/share/man/man3/Bio::DB::RefSeq.3pm.gz drwxr-xr-x root/root 0 2025-04-20 10:45 ./usr/share/perl5/ drwxr-xr-x root/root 0 2025-04-20 10:45 ./usr/share/perl5/Bio/ drwxr-xr-x root/root 0 2025-04-20 10:45 ./usr/share/perl5/Bio/DB/ -rw-r--r-- root/root 4747 2019-12-07 22:09 ./usr/share/perl5/Bio/DB/RefSeq.pm +------------------------------------------------------------------------------+ | Post Build Sun, 28 Jun 2026 15:19:36 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Sun, 28 Jun 2026 15:19:36 +0000 | +------------------------------------------------------------------------------+ Purging /build/libbio-db-refseq-perl-1kPYWj Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Sun, 28 Jun 2026 15:19:37 +0000 | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: full Build-Space: 428 Build-Time: 4 Distribution: perl-5.44-throwaway Host Architecture: amd64 Install-Time: 8 Job: /srv/debomatic/incoming/libbio-db-refseq-perl_1.7.4-2.dsc Machine Architecture: amd64 Package: libbio-db-refseq-perl Package-Time: 18 Source-Version: 1.7.4-2 Space: 428 Status: successful Version: 1.7.4-2 -------------------------------------------------------------------------------- Finished at 2026-06-28T15:19:36Z Build needed 00:00:18, 428k disk space