sbuild (Debian sbuild) 0.91.10 (27 June 2026) on carme.larted.org.uk +==============================================================================+ | lammps 20260704+dfsg-2 (amd64) Sat, 26 Sep 2026 04:02:12 +0000 | +==============================================================================+ Package: lammps Version: 20260704+dfsg-2 Source Version: 20260704+dfsg-2 Distribution: perl-5.44-throwaway Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: full I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... +------------------------------------------------------------------------------+ | Chroot Setup Commands Sat, 26 Sep 2026 04:02:13 +0000 | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup lammps_20260704+dfsg-2 perl-5.44-throwaway amd64 ----------------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup lammps_20260704+dfsg-2 perl-5.44-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- I: Setting up apt archive... +------------------------------------------------------------------------------+ | Update chroot Sat, 26 Sep 2026 04:02:14 +0000 | +------------------------------------------------------------------------------+ Get:1 file:/srv/reprepro perl-5.44 InRelease [3042 B] Hit:2 http://deb.debian.org/debian unstable InRelease Hit:3 http://deb.debian.org/debian sid InRelease Get:1 file:/srv/reprepro perl-5.44 InRelease [3042 B] Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files Sat, 26 Sep 2026 04:02:16 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/debomatic/incoming/lammps_20260704+dfsg-2.dsc exists in /srv/debomatic/incoming; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Sat, 26 Sep 2026 04:02:16 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: dpkg-dev (>= 1.22.5), cmake, debhelper-compat (= 14), dh-python, pybuild-plugin-pyproject, python3-setuptools, gfortran-for-host | fortran-compiler, libavcodec-dev, libeigen3-dev, libfftw3-dev, libhdf5-mpi-dev, libjpeg-dev, libkim-api-dev, libnetcdf-dev, libpnetcdf-dev, libsymspg-dev, libvtk9-dev, libvtk9-qt-dev, mpi-default-bin, mpi-default-dev, ocl-icd-opencl-dev | opencl-dev, python3-all-dev, libpython3-all-dev, python3-ipython, voro++-dev, build-essential, dh-sequence-sphinxdoc, libjs-sphinxdoc, libjs-jquery, libjs-mathjax, libjs-underscore, texlive-latex-recommended, texlive-fonts-recommended, texlive-latex-extra, tex-gyre, doxygen, sphinx-rtd-theme-common, latexmk, htmldoc, python3-sphinx, python3-sphinx-tabs, python3-sphinxcontrib.jquery, python3-sphinxcontrib.spelling, python3-breathe, python3-sphinx-design, python3-venv, git Filtered Build-Depends: dpkg-dev (>= 1.22.5), cmake, debhelper-compat (= 14), dh-python, pybuild-plugin-pyproject, python3-setuptools, gfortran-for-host, libavcodec-dev, libeigen3-dev, libfftw3-dev, libhdf5-mpi-dev, libjpeg-dev, libkim-api-dev, libnetcdf-dev, libpnetcdf-dev, libsymspg-dev, libvtk9-dev, libvtk9-qt-dev, mpi-default-bin, mpi-default-dev, ocl-icd-opencl-dev, python3-all-dev, libpython3-all-dev, python3-ipython, voro++-dev, build-essential, dh-sequence-sphinxdoc, libjs-sphinxdoc, libjs-jquery, libjs-mathjax, libjs-underscore, texlive-latex-recommended, texlive-fonts-recommended, texlive-latex-extra, tex-gyre, doxygen, sphinx-rtd-theme-common, latexmk, htmldoc, python3-sphinx, python3-sphinx-tabs, python3-sphinxcontrib.jquery, python3-sphinxcontrib.spelling, python3-breathe, python3-sphinx-design, python3-venv, git dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/lammps-rlhK5n/resolver-0Mzb6i/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/build/lammps-rlhK5n/resolver-0Mzb6i/apt_archive ./ InRelease Get:2 copy:/build/lammps-rlhK5n/resolver-0Mzb6i/apt_archive ./ Release [615 B] Ign:3 copy:/build/lammps-rlhK5n/resolver-0Mzb6i/apt_archive ./ Release.gpg Get:4 copy:/build/lammps-rlhK5n/resolver-0Mzb6i/apt_archive ./ Sources [1499 B] Get:5 copy:/build/lammps-rlhK5n/resolver-0Mzb6i/apt_archive ./ Packages [1413 B] Fetched 3527 B in 0s (321 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following additional packages will be installed: adwaita-icon-theme at-spi2-common autoconf automake autopoint autotools-dev bsdextrautils bubblewrap ca-certificates ca-certificates-java cfortran cmake comerr-dev cpp-16-for-host cpp-for-host dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service debhelper default-jdk default-jdk-headless default-jre default-jre-headless dh-autoreconf dh-python dh-strip-nondeterminism dictionaries-common docutils-common doxygen dwz emacsen-common file fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome fonts-font-awesome-legacy fonts-lato fonts-lmodern fonts-mathjax fonts-roboto-slab gcc-16-for-host gcc-for-host gdal-data gdal-plugins gettext gettext-base gfortran-16 gfortran-16-for-host gfortran-16-x86-64-linux-gnu gfortran-for-host gfortran-x86-64-linux-gnu git git-man glycin-loaders glycin-thumbnailers graphviz groff-base gtk-update-icon-cache hdf5-helpers hicolor-icon-theme htmldoc htmldoc-common hunspell-en-us ibverbs-providers icu-devtools intltool-debian java-common krb5-multidev latexmk libabsl20260526 libacl1-dev libadios2-mpi-auxiliary-2.12 libadios2-mpi-c++-2.12 libadios2-mpi-c-2.12 libadios2-mpi-core-2.12 libadios2-mpi-plugins libaec-dev libaec0 libamd-comgr3 libamdhip64-6 libaom-dev libaom3 libapache-pom-java libapparmor1 libarchive-dev libarchive-zip-perl libarchive13t64 libarmadillo-dev libarmadillo15 libarpack2-dev libarpack2t64 libasound2-data libasound2t64 libaspell15 libassuan-dev libatk-bridge2.0-0t64 libatk1.0-0t64 libatspi2.0-0t64 libattr1-dev libavahi-client3 libavahi-common-data libavahi-common3 libavcodec-dev libavcodec63 libavformat-dev libavformat63 libavif-dev libavif16 libavutil-dev libavutil61 libb2-1 libblas-dev libblas3 libblosc-dev libblosc1 libblosc2-7 libbluray4 libboost1.90-dev libbrotli-dev libbrotli1 libbsd0 libbz2-dev libcairo-gobject2 libcairo2 libcap2 libcbor0.10 libcdt6 libcfitsio-dev libcfitsio10t64 libcgraph8 libchromaprint1 libcjson1 libclang-common-21-dev libclang-cpp21 libclang1-21 libcloudproviders0 libcodec2-1.2 libcolord2 libcom-err2 libcommons-logging-java libcommons-parent-java libcups2t64 libcurl3t64-gnutls libcurl4-gnutls libcurl4-gnutls-dev libcurl4t64 libdatrie1 libdav1d-dev libdav1d7 libdbus-1-3 libdconf1 libde265-0 libdebhelper-perl libdeflate-dev libdeflate0 libdouble-conversion3 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm2 libduktape207 libdvdnav4 libdvdread8t64 libedit2 libegl-mesa0 libegl1 libeigen3-dev libelf1t64 libenchant-2-2 libepoxy0 liberror-perl libesmtp6 libevdev2 libevent-2.1-7t64 libevent-core-2.1-7t64 libevent-dev libevent-extra-2.1-7t64 libevent-openssl-2.1-7t64 libevent-pthreads-2.1-7t64 libexpat1 libexpat1-dev libexprtk-dev libext2fs-dev libext2fs2t64 libfabric1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libfido2-1 libfile-stripnondeterminism-perl libfltk-images1.3t64 libfltk1.3t64 libfmt10 libfontbox-java libfontconfig-dev libfontconfig1 libfontenc1 libfreetype-dev libfreetype6 libfreexl-dev libfreexl1 libfribidi0 libfuse3-4 libfyba-dev libfyba0t64 libgav1-2 libgbm1 libgd3 libgdal-dev libgdal39 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgeos-c1t64 libgeos-dev libgeos3.15.0 libgeotiff-dev libgeotiff5 libgfortran-16-dev libgfortran5 libgif-dev libgif7 libgl-dev libgl1 libgl1-mesa-dri libgl2ps-dev libgl2ps1.4 libglew-common-dev libglew-dev libglew2.3 libglib2.0-0t64 libglu1-mesa libglu1-mesa-dev libglvnd0 libglx-dev libglx-mesa0 libglx0 libglycin-2-0 libgme0 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 libgnutls28-dev libgpg-error-dev libgpgme-dev libgpgme45 libgpgmepp-dev libgpgmepp7 libgraphite2-3 libgsm1 libgssapi-krb5-2 libgssrpc4t64 libgtk-3-0t64 libgtk-3-common libgudev-1.0-0 libgvc7 libgvplugin-gd8 libgvplugin-pango8 libgvpr2 libharfbuzz-subset0 libharfbuzz0b libhdf4-0 libhdf4-dev libhdf5-320 libhdf5-cpp-320 libhdf5-dev libhdf5-fortran-320 libhdf5-hl-320 libhdf5-hl-cpp-320 libhdf5-hl-fortran-320 libhdf5-mpi-dev libhdf5-openmpi-320 libhdf5-openmpi-cpp-320 libhdf5-openmpi-dev libhdf5-openmpi-fortran-320 libhdf5-openmpi-hl-320 libhdf5-openmpi-hl-cpp-320 libhdf5-openmpi-hl-fortran-320 libheif-dev libheif-plugin-dav1d libheif-plugin-libde265 libheif1 libhsa-runtime64-1 libhunspell-1.7-0 libhwloc-dev libhwloc-plugins libhwloc15 libhwy-dev libhwy1t64 libibmad5 libibumad3 libibverbs-dev libibverbs1 libice-dev libice6 libicu-dev libicu78 libidn2-dev libimagequant0 libinput-bin libinput10 libjbig-dev libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjs-jquery libjs-jquery-ui libjs-mathjax libjs-sphinxdoc libjs-underscore libjson-c-dev libjson-c5 libjson-perl libjsoncpp-dev libjsoncpp26 libjxl-dev libjxl0.11 libk5crypto3 libkadm5clnt-mit12 libkadm5srv-mit12 libkdb5-10t64 libkeyutils1 libkim-api-dev libkim-api2 libkpathsea6 libkrb5-3 libkrb5-dev libkrb5support0 liblapack-dev liblapack3 liblcms2-2 liblcms2-dev libldap-dev liblerc-dev liblerc4 libllvm21 libllvm22 libltdl-dev libltdl7 liblz4-dev liblzma-dev libmagic-mgc libmagic1t64 libmariadb-dev libmariadb-dev-compat libmariadb3 libmd4c0 libminizip-dev libminizip1t64 libmp3lame0 libmpfi0 libmpg123-0t64 libmtdev1t64 libmuparser-dev libmuparser2v5 libnetcdf-dev libnetcdf22 libnghttp2-14 libnghttp2-dev libnghttp3-9 libnghttp3-dev libngtcp2-16 libngtcp2-crypto-gnutls-dev libngtcp2-crypto-gnutls8 libngtcp2-crypto-ossl0 libngtcp2-dev libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnorm1t64 libnspr4 libnspr4-dev libnss3 libnss3-dev libnuma-dev libnuma1 libodbc2 libodbccr2 libodbcinst2 libogg-dev libogg0 libopengl-dev libopengl0 libopenjp2-7 libopenjp2-7-dev libopenmpi-dev libopenmpi40 libopenmpt0t64 libopus0 libp11-kit-dev libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpathplan4 libpciaccess0 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpcsclite1 libpdfbox-java libpgm-5.3-0t64 libpipeline1 libpixman-1-0 libpkgconf7 libpmix2t64 libpnetcdf-dev libpnetcdf8 libpng-dev libpng16-16t64 libpoppler-dev libpoppler-private-dev libpoppler162 libpotrace0 libpq-dev libpq5 libproc2-1 libproj-dev libproj25 libproxy1v5 libprrte-bin libprrte-dev libprrte4 libpsl-dev libpsl5t64 libpsm2-2 libptexenc1 libpugixml1v5 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.14 libpython3.14-dev libpython3.14-minimal libpython3.14-stdlib libqhull-dev libqhull-r8.0 libqhull8.0 libqhullcpp8.0 libqt6concurrent6 libqt6core6t64 libqt6dbus6 libqt6gui6 libqt6network6 libqt6opengl6 libqt6openglwidgets6 libqt6printsupport6 libqt6sql6 libqt6test6 libqt6waylandclient6 libqt6widgets6 libqt6wlshellintegration6 libqt6xml6 librabbitmq4 librav1e-dev librav1e0.8 librdmacm1t64 librhash1 librist4 librsvg2-2 librtmp-dev librtmp1 librttopo-dev librttopo1 libsensors-config libsensors5 libsharpyuv-dev libsharpyuv0 libshine3 libsm-dev libsm6 libsnappy1v5 libsodium26 libsoxr0 libspatialite-dev libspatialite8t64 libspdlog1.15 libspeex1 libsqlite3-dev libsrt1.5-gnutls libssh-4 libssh2-1-dev libssh2-1t64 libssl-dev libsuperlu-dev libsuperlu7 libsvtav1enc-dev libsvtav1enc4 libswresample-dev libswresample7 libswscale-dev libswscale10 libsymspg-dev libsymspg2 libsynctex2 libsystemd-shared libsz2 libtasn1-6-dev libtbb-dev libtbb12 libtbbbind-2-5 libtbbmalloc2 libteckit0 libtexlua53-5 libtext-charwidth-perl libtext-iconv-perl libtext-wrapi18n-perl libthai-data libthai0 libtheora-dev libtheora1 libtheoradec2 libtheoraenc2 libtiff-dev libtiff6 libtiffxx6 libtool libts0t64 libtwolame0 libucc1 libuchardet0 libucx0 libudfread3 libunbound8 libunistring-dev liburing2 liburiparser-dev liburiparser1 libutfcpp-dev libuv1t64 libva-drm2 libva-x11-2 libva2 libvdpau1 libvorbis0a libvorbisenc2 libvorbisfile3 libvoro++1 libvpl2 libvpx12 libvtk9-dev libvtk9-java libvtk9-qt-dev libvtk9.6 libvtk9.6-qt libvulkan-dev libvulkan1 libwacom-common libwacom9 libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebp-dev libwebp7 libwebpdecoder3 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libx11-dev libx11-xcb1 libx264-165 libx265-216 libxapian30 libxau-dev libxau6 libxaw7 libxcb-cursor0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxcomposite1 libxcursor-dev libxcursor1 libxdamage1 libxdmcp-dev libxdmcp6 libxdot4 libxerces-c-dev libxerces-c3.2t64 libxext-dev libxext6 libxfixes-dev libxfixes3 libxft-dev libxft2 libxi6 libxinerama1 libxkbcommon-x11-0 libxkbcommon0 libxml2-16 libxml2-dev libxmu6 libxnvctrl0 libxpm4 libxrandr2 libxrender-dev libxrender1 libxres1 libxshmfence1 libxss-dev libxss1 libxt-dev libxt6t64 libxtst6 libxvidcore4 libxxf86vm1 libxxhash-dev libyaml-cpp0.9 libyuv-dev libyuv0 libz3-4 libze1 libzfp1t64 libzmq5 libzstd-dev libzvbi-common libzvbi0t64 libzzip-0-13t64 m4 man-db mariadb-common media-types mesa-libgallium mpi-default-bin mpi-default-dev mysql-common netbase nettle-dev nlohmann-json3-dev ocl-icd-libopencl1 ocl-icd-opencl-dev opencl-c-headers opencl-clhpp-headers openjdk-25-jdk openjdk-25-jdk-headless openjdk-25-jre openjdk-25-jre-headless openmpi-bin openmpi-common openssh-client openssh-common openssl pci.ids pkgconf pkgconf-bin po-debconf preview-latex-style procps proj-data prrte-common pybuild-plugin-pyproject python-babel-localedata python3 python3-alabaster python3-all python3-all-dev python3-astroid python3-asttokens python3-autocommand python3-babel python3-breathe python3-build python3-certifi python3-chardet python3-charset-normalizer python3-decorator python3-defusedxml python3-dev python3-docutils python3-enchant python3-executing python3-idna python3-imagesize python3-installer python3-ipython python3-ipython-pygments-lexers python3-jaraco.context python3-jaraco.functools python3-jedi python3-jinja2 python3-markupsafe python3-matplotlib-inline python3-minimal python3-more-itertools python3-mpi4py python3-packaging python3-parso python3-pexpect python3-pip-whl python3-prompt-toolkit python3-ptyprocess python3-pure-eval python3-pygments python3-pyproject-hooks python3-requests python3-roman-numerals python3-setuptools python3-setuptools-whl python3-snowballstemmer python3-sphinx python3-sphinx-design python3-sphinx-tabs python3-sphinxcontrib.jquery python3-sphinxcontrib.spelling python3-stack-data python3-traitlets python3-typeshed python3-typing-extensions python3-urllib3 python3-venv python3-vtk9 python3-wcwidth python3-wheel python3-zipp python3.14 python3.14-dev python3.14-minimal python3.14-venv qmake6 qmake6-bin qt6-base-dev qt6-base-dev-tools qt6-qpa-plugins qtpaths6 qtpaths6-bin sensible-utils sgml-base shared-mime-info sphinx-common sphinx-rtd-theme-common systemd systemd-sysv t1utils tex-common tex-gyre texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures tzdata ucf unixodbc-common unixodbc-dev uuid-dev voro++-dev vtk9 x11-common x11proto-dev xdg-utils xfonts-encodings xfonts-utils xkb-data xml-core xorg-sgml-doctools xtrans-dev zlib1g-dev Suggested packages: adwaita-icon-theme-legacy autoconf-archive gnu-standards autoconf-doc cmake-doc cmake-format elpa-cmake-mode ninja-build doc-base dh-make flit ispell | aspell | hunspell wordlist doxygen-latex doxygen-doc doxygen-gui node-fortawesome-fontawesome-free fonts-roboto gettext-doc libasprintf-dev libgettextpo-dev gnulib-l10n gfortran-16-multilib gfortran-16-doc libcoarrays-dev gfortran-doc git-doc git-email git-gui gitk gitweb git-cvs git-svn libheif-plugin-x265 | libheif-plugin-kvazaar gsfonts graphviz-doc groff hunspell openoffice.org-hunspell | openoffice.org-core krb5-doc ghostscript lrzip libitpp-dev alsa-utils libasound2-plugins aspell libcuda1 libnvcuvid1 libnvidia-encode1 liblapack-doc libbluray-bdj libboost1.90-doc libboost-atomic1.90-dev libboost-chrono1.90-dev libboost-container1.90-dev libboost-context1.90-dev libboost-contract1.90-dev libboost-coroutine1.90-dev libboost-date-time1.90-dev libboost-exception1.90-dev libboost-fiber1.90-dev libboost-filesystem1.90-dev libboost-graph-parallel1.90-dev libboost-graph1.90-dev libboost-iostreams1.90-dev libboost-json1.90-dev libboost-locale1.90-dev libboost-log1.90-dev libboost-math1.90-dev libboost-mpi-python1.90-dev libboost-mpi1.90-dev libboost-nowide1.90-dev libboost-numpy1.90-dev libboost-program-options1.90-dev libboost-python1.90-dev libboost-random1.90-dev libboost-regex1.90-dev libboost-serialization1.90-dev libboost-stacktrace1.90-dev libboost-test1.90-dev libboost-thread1.90-dev libboost-timer1.90-dev libboost-type-erasure1.90-dev libboost-url1.90-dev libboost-wave1.90-dev libboost1.90-tools-dev libmpfrc++-dev libntl-dev colord libavalon-framework-java libexcalibur-logkit-java liblog4j1.2-java cups-common libcurl4-doc libidn-dev libdvdcss2 libeigen3-doc libenchant-2-voikko libfftw3-doc freetype2-doc fuse3 libgd-tools libgeos-doc geotiff-bin gdal-bin glew-utils low-memory-monitor gmp-doc libgmp10-doc libmpfr-dev dns-root-data gnutls-bin gnutls-doc krb5-user gvfs hdf4-tools libhdf5-doc libheif-plugin-ffmpegdec libheif-plugin-jpegdec libheif-plugin-jpegenc libheif-plugin-j2kdec libheif-plugin-j2kenc libheif-plugin-kvazaar libheif-plugin-rav1e libheif-plugin-svtenc libhwloc-contrib-plugins libice-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix libjs-mathjax-doc liblcms2-utils libtool-doc liblzma-doc libmpfi-doc netcdf-bin netcdf-doc libnghttp2-doc odbc-postgresql tdsodbc openmpi-doc opus-tools p11-kit-doc pcscd postgresql-doc-18 libpq-oauth proj-bin librsvg2-bin lm-sensors libsm-doc speex sqlite3-doc libssl-doc libsuperlu-doc libbpf1 libcryptsetup12 libdw1t64 libfdisk1 libkmod2 libmicrohttpd12t64 libpwquality1 libqrencode4 libtss2-esys-3.0.2-0t64 libtbb-doc vtk9-doc vtk9-examples java-virtual-machine libwacom-bin libx11-doc xapian-tools libxcb-doc libxerces-c-doc libxext-doc libxt-doc m4-doc apparmor less www-browser opencl-icd opencl-clhpp-headers-doc openjdk-25-demo openjdk-25-source visualvm libnss-mdns fonts-dejavu-extra fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic gfortran | fortran-compiler keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl python3-doc python3-tk breathe-doc python3-pip python-build-doc python-charset-normalizer-doc docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french python-installer-doc python-ipython-doc python-jinja2-doc python3-numpy python-pexpect-doc python-pygments-doc ttf-bitstream-vera python3-cryptography python3-openssl python3-socks python-requests-doc python-setuptools-doc python3-stemmer dvipng dvisvgm fonts-freefont-otf imagemagick node-mathjax-full python3-sphinx-rtd-theme sphinx-doc texlive-fonts-extra texlive-plain-generic python3-sphinx-tabs-doc python-traitlets-doc python-typing-extensions-doc python3-brotli mayavi2 python3.14-doc binfmt-support sgml-base-doc systemd-container systemd-homed systemd-imds systemd-userdbd systemd-boot systemd-report systemd-resolved systemd-repart polkitd gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec texlive-binaries-sse2 hintview texlive-fonts-recommended-doc texlive-latex-base-doc wp2latex icc-profiles libfile-which-perl texlive-latex-extra-doc texlive-science texlive-latex-recommended-doc texlive-luatex texlive-pstricks dot2tex prerex texlive-pictures-doc vprerex Recommended packages: librsvg2-common gfortran | fortran-compiler curl | wget | lynx less libheif-plugin-aomenc | libheif-plugin-rav1e | libheif-plugin-svtenc fonts-liberation xpdf | pdf-viewer gv | postscript-viewer alsa-ucm-conf alsa-topology-conf aspell-en | aspell-dictionary | aspell6a-dictionary at-spi2-core libaacs0 bzip2-doc libcfitsio-doc libclang-rt-21-dev enchant libarchive-cpio-perl proj-bin libglib2.0-data xdg-user-dirs gpg-wks-client libgpgmepp-doc ibus-gtk3 libgtk-3-bin libheif-plugin-x265 libheif-plugin-aomenc javascript-common libjson-xs-perl krb5-locales libcoarrays-openmpi-dev libpng-tools poppler-data libpmix-dev publicsuffix qt6-translations-l10n qt6-gtk-platformtheme qt6-svg-plugins qt6-wayland libqt6sql6-sqlite | libqt6sql6-mysql | libqt6sql6-odbc | libqt6sql6-psql | libqt6sql6-ibase libtasn1-doc mesa-vulkan-drivers | vulkan-icd libatk-wrapper-java-jni fonts-dejavu-extra xauth libmail-sendmail-perl psmisc linux-sysctl-defaults python3-pil python3-matplotlib login systemd-timesyncd | time-daemon systemd-tpm systemd-cryptsetup libbpf1 libcryptsetup12 libkmod2 libnss-systemd fonts-texgyre fonts-texgyre-math lmodern dvisvgm tipa libspreadsheet-parseexcel-perl texlive-plain-generic ruby tk libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: adwaita-icon-theme at-spi2-common autoconf automake autopoint autotools-dev bsdextrautils bubblewrap ca-certificates ca-certificates-java cfortran cmake comerr-dev cpp-16-for-host cpp-for-host dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service debhelper default-jdk default-jdk-headless default-jre default-jre-headless dh-autoreconf dh-python dh-strip-nondeterminism dictionaries-common docutils-common doxygen dwz emacsen-common file fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome fonts-font-awesome-legacy fonts-lato fonts-lmodern fonts-mathjax fonts-roboto-slab gcc-16-for-host gcc-for-host gdal-data gdal-plugins gettext gettext-base gfortran-16 gfortran-16-for-host gfortran-16-x86-64-linux-gnu gfortran-for-host gfortran-x86-64-linux-gnu git git-man glycin-loaders glycin-thumbnailers graphviz groff-base gtk-update-icon-cache hdf5-helpers hicolor-icon-theme htmldoc htmldoc-common hunspell-en-us ibverbs-providers icu-devtools intltool-debian java-common krb5-multidev latexmk libabsl20260526 libacl1-dev libadios2-mpi-auxiliary-2.12 libadios2-mpi-c++-2.12 libadios2-mpi-c-2.12 libadios2-mpi-core-2.12 libadios2-mpi-plugins libaec-dev libaec0 libamd-comgr3 libamdhip64-6 libaom-dev libaom3 libapache-pom-java libapparmor1 libarchive-dev libarchive-zip-perl libarchive13t64 libarmadillo-dev libarmadillo15 libarpack2-dev libarpack2t64 libasound2-data libasound2t64 libaspell15 libassuan-dev libatk-bridge2.0-0t64 libatk1.0-0t64 libatspi2.0-0t64 libattr1-dev libavahi-client3 libavahi-common-data libavahi-common3 libavcodec-dev libavcodec63 libavformat-dev libavformat63 libavif-dev libavif16 libavutil-dev libavutil61 libb2-1 libblas-dev libblas3 libblosc-dev libblosc1 libblosc2-7 libbluray4 libboost1.90-dev libbrotli-dev libbrotli1 libbsd0 libbz2-dev libcairo-gobject2 libcairo2 libcap2 libcbor0.10 libcdt6 libcfitsio-dev libcfitsio10t64 libcgraph8 libchromaprint1 libcjson1 libclang-common-21-dev libclang-cpp21 libclang1-21 libcloudproviders0 libcodec2-1.2 libcolord2 libcom-err2 libcommons-logging-java libcommons-parent-java libcups2t64 libcurl3t64-gnutls libcurl4-gnutls libcurl4-gnutls-dev libcurl4t64 libdatrie1 libdav1d-dev libdav1d7 libdbus-1-3 libdconf1 libde265-0 libdebhelper-perl libdeflate-dev libdeflate0 libdouble-conversion3 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm2 libduktape207 libdvdnav4 libdvdread8t64 libedit2 libegl-mesa0 libegl1 libeigen3-dev libelf1t64 libenchant-2-2 libepoxy0 liberror-perl libesmtp6 libevdev2 libevent-2.1-7t64 libevent-core-2.1-7t64 libevent-dev libevent-extra-2.1-7t64 libevent-openssl-2.1-7t64 libevent-pthreads-2.1-7t64 libexpat1 libexpat1-dev libexprtk-dev libext2fs-dev libext2fs2t64 libfabric1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libfido2-1 libfile-stripnondeterminism-perl libfltk-images1.3t64 libfltk1.3t64 libfmt10 libfontbox-java libfontconfig-dev libfontconfig1 libfontenc1 libfreetype-dev libfreetype6 libfreexl-dev libfreexl1 libfribidi0 libfuse3-4 libfyba-dev libfyba0t64 libgav1-2 libgbm1 libgd3 libgdal-dev libgdal39 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgeos-c1t64 libgeos-dev libgeos3.15.0 libgeotiff-dev libgeotiff5 libgfortran-16-dev libgfortran5 libgif-dev libgif7 libgl-dev libgl1 libgl1-mesa-dri libgl2ps-dev libgl2ps1.4 libglew-common-dev libglew-dev libglew2.3 libglib2.0-0t64 libglu1-mesa libglu1-mesa-dev libglvnd0 libglx-dev libglx-mesa0 libglx0 libglycin-2-0 libgme0 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 libgnutls28-dev libgpg-error-dev libgpgme-dev libgpgme45 libgpgmepp-dev libgpgmepp7 libgraphite2-3 libgsm1 libgssapi-krb5-2 libgssrpc4t64 libgtk-3-0t64 libgtk-3-common libgudev-1.0-0 libgvc7 libgvplugin-gd8 libgvplugin-pango8 libgvpr2 libharfbuzz-subset0 libharfbuzz0b libhdf4-0 libhdf4-dev libhdf5-320 libhdf5-cpp-320 libhdf5-dev libhdf5-fortran-320 libhdf5-hl-320 libhdf5-hl-cpp-320 libhdf5-hl-fortran-320 libhdf5-mpi-dev libhdf5-openmpi-320 libhdf5-openmpi-cpp-320 libhdf5-openmpi-dev libhdf5-openmpi-fortran-320 libhdf5-openmpi-hl-320 libhdf5-openmpi-hl-cpp-320 libhdf5-openmpi-hl-fortran-320 libheif-dev libheif-plugin-dav1d libheif-plugin-libde265 libheif1 libhsa-runtime64-1 libhunspell-1.7-0 libhwloc-dev libhwloc-plugins libhwloc15 libhwy-dev libhwy1t64 libibmad5 libibumad3 libibverbs-dev libibverbs1 libice-dev libice6 libicu-dev libicu78 libidn2-dev libimagequant0 libinput-bin libinput10 libjbig-dev libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjs-jquery libjs-jquery-ui libjs-mathjax libjs-sphinxdoc libjs-underscore libjson-c-dev libjson-c5 libjson-perl libjsoncpp-dev libjsoncpp26 libjxl-dev libjxl0.11 libk5crypto3 libkadm5clnt-mit12 libkadm5srv-mit12 libkdb5-10t64 libkeyutils1 libkim-api-dev libkim-api2 libkpathsea6 libkrb5-3 libkrb5-dev libkrb5support0 liblapack-dev liblapack3 liblcms2-2 liblcms2-dev libldap-dev liblerc-dev liblerc4 libllvm21 libllvm22 libltdl-dev libltdl7 liblz4-dev liblzma-dev libmagic-mgc libmagic1t64 libmariadb-dev libmariadb-dev-compat libmariadb3 libmd4c0 libminizip-dev libminizip1t64 libmp3lame0 libmpfi0 libmpg123-0t64 libmtdev1t64 libmuparser-dev libmuparser2v5 libnetcdf-dev libnetcdf22 libnghttp2-14 libnghttp2-dev libnghttp3-9 libnghttp3-dev libngtcp2-16 libngtcp2-crypto-gnutls-dev libngtcp2-crypto-gnutls8 libngtcp2-crypto-ossl0 libngtcp2-dev libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnorm1t64 libnspr4 libnspr4-dev libnss3 libnss3-dev libnuma-dev libnuma1 libodbc2 libodbccr2 libodbcinst2 libogg-dev libogg0 libopengl-dev libopengl0 libopenjp2-7 libopenjp2-7-dev libopenmpi-dev libopenmpi40 libopenmpt0t64 libopus0 libp11-kit-dev libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpathplan4 libpciaccess0 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpcsclite1 libpdfbox-java libpgm-5.3-0t64 libpipeline1 libpixman-1-0 libpkgconf7 libpmix2t64 libpnetcdf-dev libpnetcdf8 libpng-dev libpng16-16t64 libpoppler-dev libpoppler-private-dev libpoppler162 libpotrace0 libpq-dev libpq5 libproc2-1 libproj-dev libproj25 libproxy1v5 libprrte-bin libprrte-dev libprrte4 libpsl-dev libpsl5t64 libpsm2-2 libptexenc1 libpugixml1v5 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.14 libpython3.14-dev libpython3.14-minimal libpython3.14-stdlib libqhull-dev libqhull-r8.0 libqhull8.0 libqhullcpp8.0 libqt6concurrent6 libqt6core6t64 libqt6dbus6 libqt6gui6 libqt6network6 libqt6opengl6 libqt6openglwidgets6 libqt6printsupport6 libqt6sql6 libqt6test6 libqt6waylandclient6 libqt6widgets6 libqt6wlshellintegration6 libqt6xml6 librabbitmq4 librav1e-dev librav1e0.8 librdmacm1t64 librhash1 librist4 librsvg2-2 librtmp-dev librtmp1 librttopo-dev librttopo1 libsensors-config libsensors5 libsharpyuv-dev libsharpyuv0 libshine3 libsm-dev libsm6 libsnappy1v5 libsodium26 libsoxr0 libspatialite-dev libspatialite8t64 libspdlog1.15 libspeex1 libsqlite3-dev libsrt1.5-gnutls libssh-4 libssh2-1-dev libssh2-1t64 libssl-dev libsuperlu-dev libsuperlu7 libsvtav1enc-dev libsvtav1enc4 libswresample-dev libswresample7 libswscale-dev libswscale10 libsymspg-dev libsymspg2 libsynctex2 libsystemd-shared libsz2 libtasn1-6-dev libtbb-dev libtbb12 libtbbbind-2-5 libtbbmalloc2 libteckit0 libtexlua53-5 libtext-charwidth-perl libtext-iconv-perl libtext-wrapi18n-perl libthai-data libthai0 libtheora-dev libtheora1 libtheoradec2 libtheoraenc2 libtiff-dev libtiff6 libtiffxx6 libtool libts0t64 libtwolame0 libucc1 libuchardet0 libucx0 libudfread3 libunbound8 libunistring-dev liburing2 liburiparser-dev liburiparser1 libutfcpp-dev libuv1t64 libva-drm2 libva-x11-2 libva2 libvdpau1 libvorbis0a libvorbisenc2 libvorbisfile3 libvoro++1 libvpl2 libvpx12 libvtk9-dev libvtk9-java libvtk9-qt-dev libvtk9.6 libvtk9.6-qt libvulkan-dev libvulkan1 libwacom-common libwacom9 libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebp-dev libwebp7 libwebpdecoder3 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libx11-dev libx11-xcb1 libx264-165 libx265-216 libxapian30 libxau-dev libxau6 libxaw7 libxcb-cursor0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxcomposite1 libxcursor-dev libxcursor1 libxdamage1 libxdmcp-dev libxdmcp6 libxdot4 libxerces-c-dev libxerces-c3.2t64 libxext-dev libxext6 libxfixes-dev libxfixes3 libxft-dev libxft2 libxi6 libxinerama1 libxkbcommon-x11-0 libxkbcommon0 libxml2-16 libxml2-dev libxmu6 libxnvctrl0 libxpm4 libxrandr2 libxrender-dev libxrender1 libxres1 libxshmfence1 libxss-dev libxss1 libxt-dev libxt6t64 libxtst6 libxvidcore4 libxxf86vm1 libxxhash-dev libyaml-cpp0.9 libyuv-dev libyuv0 libz3-4 libze1 libzfp1t64 libzmq5 libzstd-dev libzvbi-common libzvbi0t64 libzzip-0-13t64 m4 man-db mariadb-common media-types mesa-libgallium mpi-default-bin mpi-default-dev mysql-common netbase nettle-dev nlohmann-json3-dev ocl-icd-libopencl1 ocl-icd-opencl-dev opencl-c-headers opencl-clhpp-headers openjdk-25-jdk openjdk-25-jdk-headless openjdk-25-jre openjdk-25-jre-headless openmpi-bin openmpi-common openssh-client openssh-common openssl pci.ids pkgconf pkgconf-bin po-debconf preview-latex-style procps proj-data prrte-common pybuild-plugin-pyproject python-babel-localedata python3 python3-alabaster python3-all python3-all-dev python3-astroid python3-asttokens python3-autocommand python3-babel python3-breathe python3-build python3-certifi python3-chardet python3-charset-normalizer python3-decorator python3-defusedxml python3-dev python3-docutils python3-enchant python3-executing python3-idna python3-imagesize python3-installer python3-ipython python3-ipython-pygments-lexers python3-jaraco.context python3-jaraco.functools python3-jedi python3-jinja2 python3-markupsafe python3-matplotlib-inline python3-minimal python3-more-itertools python3-mpi4py python3-packaging python3-parso python3-pexpect python3-pip-whl python3-prompt-toolkit python3-ptyprocess python3-pure-eval python3-pygments python3-pyproject-hooks python3-requests python3-roman-numerals python3-setuptools python3-setuptools-whl python3-snowballstemmer python3-sphinx python3-sphinx-design python3-sphinx-tabs python3-sphinxcontrib.jquery python3-sphinxcontrib.spelling python3-stack-data python3-traitlets python3-typeshed python3-typing-extensions python3-urllib3 python3-venv python3-vtk9 python3-wcwidth python3-wheel python3-zipp python3.14 python3.14-dev python3.14-minimal python3.14-venv qmake6 qmake6-bin qt6-base-dev qt6-base-dev-tools qt6-qpa-plugins qtpaths6 qtpaths6-bin sbuild-build-depends-main-dummy sensible-utils sgml-base shared-mime-info sphinx-common sphinx-rtd-theme-common systemd systemd-sysv t1utils tex-common tex-gyre texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures tzdata ucf unixodbc-common unixodbc-dev uuid-dev voro++-dev vtk9 x11-common x11proto-dev xdg-utils xfonts-encodings xfonts-utils xkb-data xml-core xorg-sgml-doctools xtrans-dev zlib1g-dev 0 upgraded, 790 newly installed, 0 to remove and 0 not upgraded. Need to get 1131 MB/1133 MB of archives. After this operation, 3927 MB of additional disk space will be used. Get:1 copy:/build/lammps-rlhK5n/resolver-0Mzb6i/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1184 B] Get:2 file:/srv/reprepro perl-5.44/main amd64 libtext-charwidth-perl amd64 0.04-12+b2 [9404 B] Get:3 file:/srv/reprepro perl-5.44/main amd64 libtext-iconv-perl amd64 1.7-9+b2 [14.4 kB] Get:4 file:/srv/reprepro perl-5.44/main amd64 libcdt6 amd64 14.1.2-1+b4 [19.0 kB] Get:5 file:/srv/reprepro perl-5.44/main amd64 libcgraph8 amd64 14.1.2-1+b4 [61.8 kB] Get:6 http://deb.debian.org/debian unstable/main amd64 libsystemd-shared amd64 262-1 [2789 kB] Get:7 file:/srv/reprepro perl-5.44/main amd64 libpathplan4 amd64 14.1.2-1+b4 [30.8 kB] Get:8 file:/srv/reprepro perl-5.44/main amd64 libxdot4 amd64 14.1.2-1+b4 [22.6 kB] Get:9 file:/srv/reprepro perl-5.44/main amd64 libgvc7 amd64 14.1.2-1+b4 [390 kB] Get:10 file:/srv/reprepro perl-5.44/main amd64 libgvpr2 amd64 14.1.2-1+b4 [134 kB] Get:11 file:/srv/reprepro perl-5.44/main amd64 libgvplugin-gd8 amd64 14.1.2-1+b4 [27.9 kB] Get:12 file:/srv/reprepro perl-5.44/main amd64 libgvplugin-pango8 amd64 14.1.2-1+b4 [32.8 kB] Get:13 file:/srv/reprepro perl-5.44/main amd64 graphviz amd64 14.1.2-1+b4 [60.2 kB] Get:14 file:/srv/reprepro perl-5.44/main amd64 libldap-dev amd64 2.6.14+dfsg-2+b1 [321 kB] Get:15 file:/srv/reprepro perl-5.44/main amd64 libpq5 amd64 18.6-3+b1 [272 kB] Get:16 file:/srv/reprepro perl-5.44/main amd64 libpq-dev amd64 18.6-3+b1 [180 kB] Get:17 http://deb.debian.org/debian unstable/main amd64 systemd amd64 262-1 [3477 kB] Get:18 http://deb.debian.org/debian unstable/main amd64 systemd-sysv amd64 262-1 [41.6 kB] Get:19 http://deb.debian.org/debian unstable/main amd64 fonts-lato all 2.015-1 [2780 kB] Get:20 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.8.4-2 [130 kB] Get:21 http://deb.debian.org/debian unstable/main amd64 libpython3.14-minimal amd64 3.14.7-4 [902 kB] Get:22 http://deb.debian.org/debian unstable/main amd64 python3.14-minimal amd64 3.14.7-4 [2713 kB] Get:23 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.14.7-3 [25.3 kB] Get:24 http://deb.debian.org/debian unstable/main amd64 media-types all 14.0.0 [30.8 kB] Get:25 http://deb.debian.org/debian unstable/main amd64 netbase all 6.6 [10.3 kB] Get:26 http://deb.debian.org/debian unstable/main amd64 tzdata all 2026c-1 [260 kB] Get:27 http://deb.debian.org/debian unstable/main amd64 libpython3.14-stdlib amd64 3.14.7-4 [2362 kB] Get:28 http://deb.debian.org/debian unstable/main amd64 python3.14 amd64 3.14.7-4 [861 kB] Get:29 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.14.7-3 [8252 B] Get:30 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.14.7-3 [26.0 kB] Get:31 http://deb.debian.org/debian unstable/main amd64 libproc2-1 amd64 2:4.0.7-1 [73.0 kB] Get:32 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.7-1 [989 kB] Get:33 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get:34 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.6.4-1 [1546 kB] Get:35 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20260816 [134 kB] Get:36 http://deb.debian.org/debian unstable/main amd64 libdbus-1-3 amd64 1.16.2-5+b1 [176 kB] Get:37 http://deb.debian.org/debian unstable/main amd64 dbus-bin amd64 1.16.2-5+b1 [76.7 kB] Get:38 http://deb.debian.org/debian unstable/main amd64 dbus-session-bus-common all 1.16.2-5 [48.7 kB] Get:39 http://deb.debian.org/debian unstable/main amd64 libapparmor1 amd64 4.1.8-2 [38.7 kB] Get:40 http://deb.debian.org/debian unstable/main amd64 dbus-daemon amd64 1.16.2-5+b1 [156 kB] Get:41 http://deb.debian.org/debian unstable/main amd64 dbus-system-bus-common all 1.16.2-5 [49.6 kB] Get:42 http://deb.debian.org/debian unstable/main amd64 dbus amd64 1.16.2-5+b1 [68.2 kB] Get:43 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.47-4 [345 kB] Get:44 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.47-4 [111 kB] Get:45 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.47-4 [43.0 kB] Get:46 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 1.0-5 [334 kB] Get:47 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-2+b2 [69.0 kB] Get:48 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.24.1-1 [1336 kB] Get:49 http://deb.debian.org/debian unstable/main amd64 libpam-systemd amd64 262-1 [346 kB] Get:50 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.42.4-1 [103 kB] Get:51 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-3 [49.2 kB] Get:52 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get:53 http://deb.debian.org/debian unstable/main amd64 libcbor0.10 amd64 0.10.2-2.2 [29.0 kB] Get:54 http://deb.debian.org/debian unstable/main amd64 libfido2-1 amd64 1.17.0-2 [80.5 kB] Get:55 http://deb.debian.org/debian unstable/main amd64 openssh-common amd64 1:10.5p1-1 [499 kB] Get:56 http://deb.debian.org/debian unstable/main amd64 libbsd0 amd64 0.12.2-3 [132 kB] Get:57 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20260512-1 [93.6 kB] Get:58 http://deb.debian.org/debian unstable/main amd64 openssh-client amd64 1:10.5p1-1 [734 kB] Get:59 http://deb.debian.org/debian unstable/main amd64 libtext-wrapi18n-perl all 0.06-11 [7788 B] Get:60 http://deb.debian.org/debian unstable/main amd64 ucf all 3.0056 [47.1 kB] Get:61 http://deb.debian.org/debian unstable/main amd64 libcap2 amd64 1:2.78-1+b1 [28.8 kB] Get:62 http://deb.debian.org/debian unstable/main amd64 bubblewrap amd64 0.13.0-1 [55.7 kB] Get:63 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.2.0-4+b1 [312 kB] Get:64 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.58-1 [289 kB] Get:65 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.14.3+dfsg-2 [492 kB] Get:66 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-9 [488 kB] Get:67 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-9 [840 kB] Get:68 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.17.1-5 [56.1 kB] Get:69 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.17.1-5 [132 kB] Get:70 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.46.4-1+b2 [259 kB] Get:71 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1+b2 [20.7 kB] Get:72 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-2+b1 [28.2 kB] Get:73 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b2 [144 kB] Get:74 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.13-1 [346 kB] Get:75 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.13-1 [829 kB] Get:76 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b2 [115 kB] Get:77 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b2 [105 kB] Get:78 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b4 [50.7 kB] Get:79 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.12-1+b2 [27.7 kB] Get:80 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.4-3+b1 [543 kB] Get:81 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.90.0-1 [1618 kB] Get:82 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.6.0-0.1 [116 kB] Get:83 http://deb.debian.org/debian unstable/main amd64 libde265-0 amd64 1.1.3-1+b1 [219 kB] Get:84 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-libde265 amd64 1.23.4-1+b1 [18.9 kB] Get:85 http://deb.debian.org/debian unstable/main amd64 libdav1d7 amd64 1.5.4-1 [583 kB] Get:86 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-dav1d amd64 1.23.4-1+b1 [21.4 kB] Get:87 http://deb.debian.org/debian unstable/main amd64 libheif1 amd64 1.23.4-1+b1 [867 kB] Get:88 http://deb.debian.org/debian unstable/main amd64 libhwy1t64 amd64 1.3.0-5.1 [694 kB] Get:89 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.19.1-1 [164 kB] Get:90 http://deb.debian.org/debian unstable/main amd64 libjxl0.11 amd64 0.11.2-5.1 [1273 kB] Get:91 http://deb.debian.org/debian unstable/main amd64 libcairo-gobject2 amd64 1.18.4-3+b1 [129 kB] Get:92 http://deb.debian.org/debian unstable/main amd64 fontconfig amd64 2.17.1-5 [191 kB] Get:93 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.16-5+b1 [26.2 kB] Get:94 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.15-2 [75.8 kB] Get:95 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 12.3.2-2+b2 [513 kB] Get:96 http://deb.debian.org/debian unstable/main amd64 libthai-data all 0.1.30-3 [172 kB] Get:97 http://deb.debian.org/debian unstable/main amd64 libdatrie1 amd64 0.2.14-2 [39.1 kB] Get:98 http://deb.debian.org/debian unstable/main amd64 libthai0 amd64 0.1.30-3 [51.7 kB] Get:99 http://deb.debian.org/debian unstable/main amd64 libpango-1.0-0 amd64 1.58.0-1 [225 kB] Get:100 http://deb.debian.org/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.58.0-1 [53.1 kB] Get:101 http://deb.debian.org/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.58.0-1 [34.2 kB] Get:102 http://deb.debian.org/debian unstable/main amd64 libxml2-16 amd64 2.15.4+dfsg-1 [683 kB] Get:103 http://deb.debian.org/debian unstable/main amd64 librsvg2-2 amd64 2.62.1+dfsg-1 [1828 kB] Get:104 http://deb.debian.org/debian unstable/main amd64 glycin-loaders amd64 2.2.1+ds-2 [2995 kB] Get:105 http://deb.debian.org/debian unstable/main amd64 libglycin-2-0 amd64 2.2.1+ds-2 [1615 kB] Get:106 http://deb.debian.org/debian unstable/main amd64 glycin-thumbnailers amd64 2.2.1+ds-2 [208 kB] Get:107 http://deb.debian.org/debian unstable/main amd64 libgdk-pixbuf2.0-common all 2.44.8+dfsg-1 [316 kB] Get:108 http://deb.debian.org/debian unstable/main amd64 shared-mime-info amd64 2.4-5+b3 [758 kB] Get:109 http://deb.debian.org/debian unstable/main amd64 libgdk-pixbuf-2.0-0 amd64 2.44.8+dfsg-1 [103 kB] Get:110 http://deb.debian.org/debian unstable/main amd64 gtk-update-icon-cache amd64 4.24.0+ds-2 [41.9 kB] Get:111 http://deb.debian.org/debian unstable/main amd64 hicolor-icon-theme all 0.18-2 [11.8 kB] Get:112 http://deb.debian.org/debian unstable/main amd64 adwaita-icon-theme all 51.0-1 [493 kB] Get:113 http://deb.debian.org/debian unstable/main amd64 at-spi2-common all 2.62.0-2 [171 kB] Get:114 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.21-1 [332 kB] Get:115 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.73-2 [516 kB] Get:116 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20240727.1+nmu1 [60.0 kB] Get:117 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.19-2 [891 kB] Get:118 http://deb.debian.org/debian unstable/main amd64 autopoint all 1.0-5 [820 kB] Get:119 http://deb.debian.org/debian unstable/main amd64 ca-certificates-java all 20260311 [11.2 kB] Get:120 http://deb.debian.org/debian unstable/main amd64 cfortran all 20210827-1.1 [64.6 kB] Get:121 http://deb.debian.org/debian unstable/main amd64 libarchive13t64 amd64 3.8.9-1 [364 kB] Get:122 http://deb.debian.org/debian unstable/main amd64 libnghttp3-9 amd64 1.17.0-1 [68.1 kB] Get:123 http://deb.debian.org/debian unstable/main amd64 libngtcp2-16 amd64 1.24.0-1 [145 kB] Get:124 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.22.1-3 [31.1 kB] Get:125 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.4-1+b1 [19.5 kB] Get:126 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.22.1-3 [79.0 kB] Get:127 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-6+b2 [9348 B] Get:128 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.22.1-3 [335 kB] Get:129 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.22.1-3 [137 kB] Get:130 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.70.0-1 [92.7 kB] Get:131 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-ossl0 amd64 1.24.0-1 [26.5 kB] Get:132 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.23.3-1 [61.7 kB] Get:133 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-6 [253 kB] Get:134 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.23.0~rc1-2 [466 kB] Get:135 http://deb.debian.org/debian unstable/main amd64 libjsoncpp26 amd64 1.9.8-2 [87.5 kB] Get:136 http://deb.debian.org/debian unstable/main amd64 librhash1 amd64 1.4.6-1.1+b1 [135 kB] Get:137 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.52.1-4 [158 kB] Get:138 http://deb.debian.org/debian unstable/main amd64 cmake amd64 4.3.4-1 [16.2 MB] Get:139 http://deb.debian.org/debian unstable/main amd64 comerr-dev amd64 2.1-1.47.4-1+b1 [51.2 kB] Get:140 http://deb.debian.org/debian unstable/main amd64 cpp-16-for-host amd64 16.2.0-3 [1136 B] Get:141 http://deb.debian.org/debian unstable/main amd64 cpp-for-host amd64 4:16.1.0-3 [4544 B] Get:142 http://deb.debian.org/debian unstable/main amd64 dbus-user-session amd64 1.16.2-5+b1 [48.8 kB] Get:143 http://deb.debian.org/debian unstable/main amd64 libdconf1 amd64 51.0-2 [45.3 kB] Get:144 http://deb.debian.org/debian unstable/main amd64 dconf-service amd64 51.0-2 [36.3 kB] Get:145 http://deb.debian.org/debian unstable/main amd64 dconf-gsettings-backend amd64 51.0-2 [31.3 kB] Get:146 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 14.5 [77.7 kB] Get:147 http://deb.debian.org/debian unstable/main amd64 libtool all 2.6.2-3 [552 kB] Get:148 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 23 [12.7 kB] Get:149 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:150 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.15.1-1 [17.1 kB] Get:151 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.15.1-1 [6020 B] Get:152 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.196-1 [61.2 kB] Get:153 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.17-1 [109 kB] Get:154 http://deb.debian.org/debian unstable/main amd64 gettext amd64 1.0-5 [2704 kB] Get:155 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:156 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.22 [216 kB] Get:157 http://deb.debian.org/debian unstable/main amd64 debhelper all 14.5 [944 kB] Get:158 http://deb.debian.org/debian unstable/main amd64 java-common all 0.77 [6620 B] Get:159 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:3.1.3-4 [213 kB] Get:160 http://deb.debian.org/debian unstable/main amd64 libnspr4 amd64 2:4.40-1 [116 kB] Get:161 http://deb.debian.org/debian unstable/main amd64 libnss3 amd64 2:3.129-1 [1553 kB] Get:162 http://deb.debian.org/debian unstable/main amd64 libpcsclite1 amd64 2.5.2-1 [56.7 kB] Get:163 http://deb.debian.org/debian unstable/main amd64 openjdk-25-jre-headless amd64 25.0.5~7ea-1 [54.0 MB] Get:164 http://deb.debian.org/debian unstable/main amd64 default-jre-headless amd64 2:1.25-77 [3012 B] Get:165 http://deb.debian.org/debian unstable/main amd64 libatk1.0-0t64 amd64 2.62.0-2 [51.7 kB] Get:166 http://deb.debian.org/debian unstable/main amd64 libxi6 amd64 2:1.8.3-1 [86.4 kB] Get:167 http://deb.debian.org/debian unstable/main amd64 libxres1 amd64 2:1.2.1-2 [17.9 kB] Get:168 http://deb.debian.org/debian unstable/main amd64 libatspi2.0-0t64 amd64 2.62.0-2 [86.9 kB] Get:169 http://deb.debian.org/debian unstable/main amd64 libatk-bridge2.0-0t64 amd64 2.62.0-2 [69.3 kB] Get:170 http://deb.debian.org/debian unstable/main amd64 libcloudproviders0 amd64 0.4.1-1 [29.6 kB] Get:171 http://deb.debian.org/debian unstable/main amd64 libcolord2 amd64 1.4.8-3 [141 kB] Get:172 http://deb.debian.org/debian unstable/main amd64 libavahi-common-data amd64 0.8-18 [113 kB] Get:173 http://deb.debian.org/debian unstable/main amd64 libavahi-common3 amd64 0.8-18 [45.2 kB] Get:174 http://deb.debian.org/debian unstable/main amd64 libavahi-client3 amd64 0.8-18 [49.2 kB] Get:175 http://deb.debian.org/debian unstable/main amd64 libcups2t64 amd64 2.4.18-1 [252 kB] Get:176 http://deb.debian.org/debian unstable/main amd64 libepoxy0 amd64 1.5.10-2+b2 [199 kB] Get:177 http://deb.debian.org/debian unstable/main amd64 libwayland-client0 amd64 1.26.0-1 [29.4 kB] Get:178 http://deb.debian.org/debian unstable/main amd64 libwayland-cursor0 amd64 1.26.0-1 [11.8 kB] Get:179 http://deb.debian.org/debian unstable/main amd64 libwayland-egl1 amd64 1.26.0-1 [5688 B] Get:180 http://deb.debian.org/debian unstable/main amd64 libxcomposite1 amd64 1:0.4.6-1+b2 [16.6 kB] Get:181 http://deb.debian.org/debian unstable/main amd64 libxfixes3 amd64 1:6.0.0-2+b5 [20.3 kB] Get:182 http://deb.debian.org/debian unstable/main amd64 libxcursor1 amd64 1:1.2.3-1+b2 [40.3 kB] Get:183 http://deb.debian.org/debian unstable/main amd64 libxdamage1 amd64 1:1.1.7-1+b1 [16.3 kB] Get:184 http://deb.debian.org/debian unstable/main amd64 libxinerama1 amd64 2:1.1.4-3+b5 [16.0 kB] Get:185 http://deb.debian.org/debian unstable/main amd64 xkb-data all 2.48-1 [841 kB] Get:186 http://deb.debian.org/debian unstable/main amd64 libxkbcommon0 amd64 1.13.1-1 [148 kB] Get:187 http://deb.debian.org/debian unstable/main amd64 libxrandr2 amd64 2:1.5.4-1+b4 [36.5 kB] Get:188 http://deb.debian.org/debian unstable/main amd64 libgtk-3-common all 3.24.52-1 [4929 kB] Get:189 http://deb.debian.org/debian unstable/main amd64 libgtk-3-0t64 amd64 3.24.52-1 [2920 kB] Get:190 http://deb.debian.org/debian unstable/main amd64 libglvnd0 amd64 1.7.0-3+b1 [54.3 kB] Get:191 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.134-3 [7860 B] Get:192 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.134-3 [38.5 kB] Get:193 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.134-3 [23.3 kB] Get:194 http://deb.debian.org/debian unstable/main amd64 pci.ids all 0.0~2026.09.23-1 [287 kB] Get:195 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.19-2 [18.5 kB] Get:196 http://deb.debian.org/debian unstable/main amd64 libdrm-intel1 amd64 2.4.134-3 [64.2 kB] Get:197 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1.1 [8644 kB] Get:198 http://deb.debian.org/debian unstable/main amd64 libllvm22 amd64 1:22.1.8-1+b2 [29.4 MB] Get:199 http://deb.debian.org/debian unstable/main amd64 libsensors-config all 1:3.6.2-2 [16.2 kB] Get:200 http://deb.debian.org/debian unstable/main amd64 libsensors5 amd64 1:3.6.2-2+b2 [37.2 kB] Get:201 http://deb.debian.org/debian unstable/main amd64 libx11-xcb1 amd64 2:1.8.13-1 [250 kB] Get:202 http://deb.debian.org/debian unstable/main amd64 libxcb-dri3-0 amd64 1.17.0-2+b2 [107 kB] Get:203 http://deb.debian.org/debian unstable/main amd64 libxcb-present0 amd64 1.17.0-2+b2 [106 kB] Get:204 http://deb.debian.org/debian unstable/main amd64 libxcb-randr0 amd64 1.17.0-2+b2 [117 kB] Get:205 http://deb.debian.org/debian unstable/main amd64 libxcb-sync1 amd64 1.17.0-2+b2 [109 kB] Get:206 http://deb.debian.org/debian unstable/main amd64 libxcb-xfixes0 amd64 1.17.0-2+b2 [109 kB] Get:207 http://deb.debian.org/debian unstable/main amd64 libxshmfence1 amd64 1.3.3-1+b2 [11.2 kB] Get:208 http://deb.debian.org/debian unstable/main amd64 mesa-libgallium amd64 26.2.3-2 [11.8 MB] Get:209 http://deb.debian.org/debian unstable/main amd64 libgbm1 amd64 26.2.3-2 [57.0 kB] Get:210 http://deb.debian.org/debian unstable/main amd64 libvulkan1 amd64 1.4.357.0-1 [150 kB] Get:211 http://deb.debian.org/debian unstable/main amd64 libgl1-mesa-dri amd64 26.2.3-2 [37.8 kB] Get:212 http://deb.debian.org/debian unstable/main amd64 libxcb-glx0 amd64 1.17.0-2+b2 [122 kB] Get:213 http://deb.debian.org/debian unstable/main amd64 libxxf86vm1 amd64 1:1.1.4-2+b1 [20.2 kB] Get:214 http://deb.debian.org/debian unstable/main amd64 libglx-mesa0 amd64 26.2.3-2 [132 kB] Get:215 http://deb.debian.org/debian unstable/main amd64 libglx0 amd64 1.7.0-3+b1 [34.9 kB] Get:216 http://deb.debian.org/debian unstable/main amd64 libgl1 amd64 1.7.0-3+b1 [87.1 kB] Get:217 http://deb.debian.org/debian unstable/main amd64 libasound2-data all 1.2.16.1-1 [19.4 kB] Get:218 http://deb.debian.org/debian unstable/main amd64 libasound2t64 amd64 1.2.16.1-1 [397 kB] Get:219 http://deb.debian.org/debian unstable/main amd64 libgif7 amd64 6.1.3-1 [46.1 kB] Get:220 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+26 [217 kB] Get:221 http://deb.debian.org/debian unstable/main amd64 libxtst6 amd64 2:1.2.5-1+b2 [26.2 kB] Get:222 http://deb.debian.org/debian unstable/main amd64 openjdk-25-jre amd64 25.0.5~7ea-1 [210 kB] Get:223 http://deb.debian.org/debian unstable/main amd64 default-jre amd64 2:1.25-77 [1028 B] Get:224 http://deb.debian.org/debian unstable/main amd64 openjdk-25-jdk-headless amd64 25.0.5~7ea-1 [351 MB] Get:225 http://deb.debian.org/debian unstable/main amd64 default-jdk-headless amd64 2:1.25-77 [1080 B] Get:226 http://deb.debian.org/debian unstable/main amd64 openjdk-25-jdk amd64 25.0.5~7ea-1 [3770 kB] Get:227 http://deb.debian.org/debian unstable/main amd64 default-jdk amd64 2:1.25-77 [1040 B] Get:228 http://deb.debian.org/debian unstable/main amd64 dh-python all 7.20260623 [114 kB] Get:229 http://deb.debian.org/debian unstable/main amd64 emacsen-common all 3.0.8 [13.6 kB] Get:230 http://deb.debian.org/debian unstable/main amd64 dictionaries-common all 1.31.4 [172 kB] Get:231 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31+nmu1 [10.9 kB] Get:232 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.21 [19.0 kB] Get:233 http://deb.debian.org/debian unstable/main amd64 docutils-common all 0.23+dfsg-2 [124 kB] Get:234 http://deb.debian.org/debian unstable/main amd64 libllvm21 amd64 1:21.1.8-13 [28.3 MB] Get:235 http://deb.debian.org/debian unstable/main amd64 libclang-cpp21 amd64 1:21.1.8-13 [12.8 MB] Get:236 http://deb.debian.org/debian unstable/main amd64 libclang1-21 amd64 1:21.1.8-13 [7711 kB] Get:237 http://deb.debian.org/debian unstable/main amd64 libfmt10 amd64 10.1.1+ds1-4+b2 [126 kB] Get:238 http://deb.debian.org/debian unstable/main amd64 libspdlog1.15 amd64 1:1.15.3+ds-1+b2 [107 kB] Get:239 http://deb.debian.org/debian unstable/main amd64 libxapian30 amd64 1.4.32-1 [1417 kB] Get:240 http://deb.debian.org/debian unstable/main amd64 doxygen amd64 1.15.0+ds1-1.1 [5544 kB] Get:241 http://deb.debian.org/debian unstable/main amd64 fonts-font-awesome-legacy all 6-3 [1547 kB] Get:242 http://deb.debian.org/debian unstable/main amd64 fonts-font-awesome all 7.3.0+dfsg-1 [677 kB] Get:243 http://deb.debian.org/debian unstable/main amd64 fonts-lmodern all 2.005-2 [4533 kB] Get:244 http://deb.debian.org/debian unstable/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get:245 http://deb.debian.org/debian unstable/main amd64 fonts-roboto-slab all 2.002+20231012+ds-1 [1159 kB] Get:246 http://deb.debian.org/debian unstable/main amd64 gcc-16-for-host amd64 16.2.0-3 [1028 B] Get:247 http://deb.debian.org/debian unstable/main amd64 gcc-for-host amd64 4:16.1.0-3 [1060 B] Get:248 http://deb.debian.org/debian unstable/main amd64 gdal-data all 3.13.3+dfsg-1 [463 kB] Get:249 http://deb.debian.org/debian unstable/main amd64 gdal-plugins amd64 3.13.3+dfsg-1+b1 [233 kB] Get:250 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 16.2.0-3 [879 kB] Get:251 http://deb.debian.org/debian unstable/main amd64 libgfortran-16-dev amd64 16.2.0-3 [921 kB] Get:252 http://deb.debian.org/debian unstable/main amd64 gfortran-16-x86-64-linux-gnu amd64 16.2.0-3 [14.5 MB] Get:253 http://deb.debian.org/debian unstable/main amd64 gfortran-16 amd64 16.2.0-3 [16.5 kB] Get:254 http://deb.debian.org/debian unstable/main amd64 gfortran-16-for-host amd64 16.2.0-3 [1080 B] Get:255 http://deb.debian.org/debian unstable/main amd64 gfortran-x86-64-linux-gnu amd64 4:16.1.0-3 [1276 B] Get:256 http://deb.debian.org/debian unstable/main amd64 gfortran-for-host amd64 4:16.1.0-3 [1092 B] Get:257 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.24.0-1 [23.9 kB] Get:258 http://deb.debian.org/debian unstable/main amd64 libcurl4-gnutls amd64 8.23.0~rc1-2 [460 kB] Get:259 http://deb.debian.org/debian unstable/main amd64 liberror-perl all 0.17030-1 [26.9 kB] Get:260 http://deb.debian.org/debian unstable/main amd64 git-man all 1:2.55.0-1 [2381 kB] Get:261 http://deb.debian.org/debian unstable/main amd64 git amd64 1:2.55.0-1 [9658 kB] Get:262 http://deb.debian.org/debian unstable/main amd64 libltdl7 amd64 2.6.2-3 [427 kB] Get:263 http://deb.debian.org/debian unstable/main amd64 libaom3 amd64 3.14.1-1 [1923 kB] Get:264 http://deb.debian.org/debian unstable/main amd64 libabsl20260526 amd64 20260526.0-2+b1 [584 kB] Get:265 http://deb.debian.org/debian unstable/main amd64 libgav1-2 amd64 0.20.0-2+b2 [372 kB] Get:266 http://deb.debian.org/debian unstable/main amd64 librav1e0.8 amd64 0.8.1-11 [966 kB] Get:267 http://deb.debian.org/debian unstable/main amd64 libsvtav1enc4 amd64 4.1.0+dfsg-1 [2414 kB] Get:268 http://deb.debian.org/debian unstable/main amd64 libyuv0 amd64 0.0.1971.20260904-2 [187 kB] Get:269 http://deb.debian.org/debian unstable/main amd64 libavif16 amd64 1.4.2-1 [147 kB] Get:270 http://deb.debian.org/debian unstable/main amd64 libimagequant0 amd64 4.4.1-1+b2 [255 kB] Get:271 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.25-1 [48.0 kB] Get:272 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b3 [32.2 kB] Get:273 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.2.0+ds-1 [203 kB] Get:274 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.6.0-0.1 [349 kB] Get:275 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.7.2-1 [383 kB] Get:276 http://deb.debian.org/debian unstable/main amd64 libxpm4 amd64 1:3.5.19-1 [58.9 kB] Get:277 http://deb.debian.org/debian unstable/main amd64 libgd3 amd64 2.3.3-14 [126 kB] Get:278 http://deb.debian.org/debian unstable/main amd64 hdf5-helpers amd64 2.2.0+repack-5 [27.6 kB] Get:279 http://deb.debian.org/debian unstable/main amd64 htmldoc-common all 1.9.24-1 [1991 kB] Get:280 http://deb.debian.org/debian unstable/main amd64 libxft2 amd64 2.3.6-1+b5 [54.8 kB] Get:281 http://deb.debian.org/debian unstable/main amd64 libfltk1.3t64 amd64 1.3.11-3+b1 [561 kB] Get:282 http://deb.debian.org/debian unstable/main amd64 libfltk-images1.3t64 amd64 1.3.11-3+b1 [50.8 kB] Get:283 http://deb.debian.org/debian unstable/main amd64 htmldoc amd64 1.9.24-1 [195 kB] Get:284 http://deb.debian.org/debian unstable/main amd64 hunspell-en-us all 1:2020.12.07-4 [558 kB] Get:285 http://deb.debian.org/debian unstable/main amd64 libnl-3-200 amd64 3.12.0-2+b1 [62.2 kB] Get:286 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-200 amd64 3.12.0-2+b1 [200 kB] Get:287 http://deb.debian.org/debian unstable/main amd64 libibverbs1 amd64 65.0-1 [67.9 kB] Get:288 http://deb.debian.org/debian unstable/main amd64 ibverbs-providers amd64 65.0-1 [424 kB] Get:289 http://deb.debian.org/debian unstable/main amd64 libicu78 amd64 78.3-2 [10.0 MB] Get:290 http://deb.debian.org/debian unstable/main amd64 icu-devtools amd64 78.3-2 [212 kB] Get:291 http://deb.debian.org/debian unstable/main amd64 libgssrpc4t64 amd64 1.22.1-3 [58.3 kB] Get:292 http://deb.debian.org/debian unstable/main amd64 libkadm5clnt-mit12 amd64 1.22.1-3 [40.3 kB] Get:293 http://deb.debian.org/debian unstable/main amd64 libkdb5-10t64 amd64 1.22.1-3 [41.3 kB] Get:294 http://deb.debian.org/debian unstable/main amd64 libkadm5srv-mit12 amd64 1.22.1-3 [54.1 kB] Get:295 http://deb.debian.org/debian unstable/main amd64 krb5-multidev amd64 1.22.1-3 [125 kB] Get:296 http://deb.debian.org/debian unstable/main amd64 tex-common all 6.20 [29.7 kB] Get:297 http://deb.debian.org/debian unstable/main amd64 libpaper2 amd64 2.2.5-0.4 [16.6 kB] Get:298 http://deb.debian.org/debian unstable/main amd64 libpaper-utils amd64 2.2.5-0.4 [15.8 kB] Get:299 http://deb.debian.org/debian unstable/main amd64 libkpathsea6 amd64 2026.20260303.78225+ds-5 [160 kB] Get:300 http://deb.debian.org/debian unstable/main amd64 libptexenc1 amd64 2026.20260303.78225+ds-5 [51.9 kB] Get:301 http://deb.debian.org/debian unstable/main amd64 libsynctex2 amd64 2026.20260303.78225+ds-5 [65.4 kB] Get:302 http://deb.debian.org/debian unstable/main amd64 libtexlua53-5 amd64 2026.20260303.78225+ds-5 [116 kB] Get:303 http://deb.debian.org/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:304 http://deb.debian.org/debian unstable/main amd64 libharfbuzz-subset0 amd64 12.3.2-2+b2 [574 kB] Get:305 http://deb.debian.org/debian unstable/main amd64 libmpfi0 amd64 1.5.4+ds-5 [36.0 kB] Get:306 http://deb.debian.org/debian unstable/main amd64 libpotrace0 amd64 1.16-2+b3 [25.5 kB] Get:307 http://deb.debian.org/debian unstable/main amd64 libteckit0 amd64 2.5.13+ds-2 [370 kB] Get:308 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.1.1-1+b2 [66.8 kB] Get:309 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.6-1+b2 [37.9 kB] Get:310 http://deb.debian.org/debian unstable/main amd64 libxt6t64 amd64 1:1.2.1-1.3+b2 [191 kB] Get:311 http://deb.debian.org/debian unstable/main amd64 libxmu6 amd64 2:1.1.3-4+b1 [59.6 kB] Get:312 http://deb.debian.org/debian unstable/main amd64 libxaw7 amd64 2:1.0.16-1+b2 [214 kB] Get:313 http://deb.debian.org/debian unstable/main amd64 libzzip-0-13t64 amd64 0.13.78+dfsg.1-0.2+b1 [58.9 kB] Get:314 http://deb.debian.org/debian unstable/main amd64 texlive-binaries amd64 2026.20260303.78225+ds-5 [9309 kB] Get:315 http://deb.debian.org/debian unstable/main amd64 xdg-utils all 1.2.1-2 [75.8 kB] Get:316 http://deb.debian.org/debian unstable/main amd64 texlive-base all 2026.20260911-1 [24.6 MB] Get:317 http://deb.debian.org/debian unstable/main amd64 texlive-latex-base all 2026.20260911-1 [1455 kB] Get:318 http://deb.debian.org/debian unstable/main amd64 latexmk all 1:4.88~ds-1 [515 kB] Get:319 http://deb.debian.org/debian unstable/main amd64 libattr1-dev amd64 1:2.6.0-1 [38.3 kB] Get:320 http://deb.debian.org/debian unstable/main amd64 libacl1-dev amd64 2.4.0-1 [104 kB] Get:321 http://deb.debian.org/debian unstable/main amd64 libblosc2-7 amd64 2.23.1+ds-2 [201 kB] Get:322 http://deb.debian.org/debian unstable/main amd64 libnuma1 amd64 2.0.19-1+b2 [22.0 kB] Get:323 http://deb.debian.org/debian unstable/main amd64 libpsm2-2 amd64 11.2.185-2.1 [181 kB] Get:324 http://deb.debian.org/debian unstable/main amd64 librdmacm1t64 amd64 65.0-1 [79.0 kB] Get:325 http://deb.debian.org/debian unstable/main amd64 libfabric1 amd64 2.1.0-1.1+b2 [716 kB] Get:326 http://deb.debian.org/debian unstable/main amd64 libevent-core-2.1-7t64 amd64 2.1.13-stable-1 [133 kB] Get:327 http://deb.debian.org/debian unstable/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.13-stable-1 [53.8 kB] Get:328 http://deb.debian.org/debian unstable/main amd64 libhwloc15 amd64 2.15.0-2 [178 kB] Get:329 http://deb.debian.org/debian unstable/main amd64 libesmtp6 amd64 1.1.0-3.2+b2 [59.3 kB] Get:330 http://deb.debian.org/debian unstable/main amd64 libxnvctrl0 amd64 535.171.04-1+b3 [14.1 kB] Get:331 http://deb.debian.org/debian unstable/main amd64 libze1 amd64 1.32.0-1 [648 kB] Get:332 http://deb.debian.org/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.3.4-1+b1 [42.8 kB] Get:333 http://deb.debian.org/debian unstable/main amd64 libhwloc-plugins amd64 2.15.0-2 [22.4 kB] Get:334 http://deb.debian.org/debian unstable/main amd64 libpmix2t64 amd64 7.0.0~git.20260918-1 [832 kB] Get:335 http://deb.debian.org/debian unstable/main amd64 libclang-common-21-dev amd64 1:21.1.8-13 [769 kB] Get:336 http://deb.debian.org/debian unstable/main amd64 libamd-comgr3 amd64 7.0.2+dfsg-3 [13.9 MB] Get:337 http://deb.debian.org/debian unstable/main amd64 libhsa-runtime64-1 amd64 6.4.3+dfsg-5 [678 kB] Get:338 http://deb.debian.org/debian unstable/main amd64 libamdhip64-6 amd64 6.4.3-5 [9385 kB] Get:339 http://deb.debian.org/debian unstable/main amd64 libfuse3-4 amd64 3.18.3-1 [109 kB] Get:340 http://deb.debian.org/debian unstable/main amd64 libibumad3 amd64 65.0-1 [29.6 kB] Get:341 http://deb.debian.org/debian unstable/main amd64 libibmad5 amd64 65.0-1 [44.2 kB] Get:342 http://deb.debian.org/debian unstable/main amd64 libucx0 amd64 1.22.0-1 [1064 kB] Get:343 http://deb.debian.org/debian unstable/main amd64 libucc1 amd64 1.9.0-1 [379 kB] Get:344 http://deb.debian.org/debian unstable/main amd64 libopenmpi40 amd64 5.0.11-2 [2106 kB] Get:345 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.7-1 [18.7 kB] Get:346 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-320 amd64 2.2.0+repack-5 [2273 kB] Get:347 http://deb.debian.org/debian unstable/main amd64 libpugixml1v5 amd64 1.16-1 [93.0 kB] Get:348 http://deb.debian.org/debian unstable/main amd64 libyaml-cpp0.9 amd64 0.9.0+dfsg-9 [147 kB] Get:349 http://deb.debian.org/debian unstable/main amd64 libzfp1t64 amd64 1.0.1-5+b1 [68.0 kB] Get:350 http://deb.debian.org/debian unstable/main amd64 libnorm1t64 amd64 1.5.9+dfsg-4+b1 [225 kB] Get:351 http://deb.debian.org/debian unstable/main amd64 libpgm-5.3-0t64 amd64 5.3.128~dfsg-3 [163 kB] Get:352 http://deb.debian.org/debian unstable/main amd64 libsodium26 amd64 1.0.22-2 [210 kB] Get:353 http://deb.debian.org/debian unstable/main amd64 libzmq5 amd64 4.3.5-1+b7 [297 kB] Get:354 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-plugins amd64 2.12.1+dfsg1-3 [24.9 kB] Get:355 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-core-2.12 amd64 2.12.1+dfsg1-3 [2079 kB] Get:356 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-c-2.12 amd64 2.12.1+dfsg1-3 [79.4 kB] Get:357 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-auxiliary-2.12 amd64 2.12.1+dfsg1-3 [441 kB] Get:358 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-c++-2.12 amd64 2.12.1+dfsg1-3 [220 kB] Get:359 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.7-1 [22.3 kB] Get:360 http://deb.debian.org/debian unstable/main amd64 libaec-dev amd64 1.1.7-1 [25.2 kB] Get:361 http://deb.debian.org/debian unstable/main amd64 libaom-dev amd64 3.14.1-1 [2193 kB] Get:362 http://deb.debian.org/debian unstable/main amd64 libapache-pom-java all 33-2 [5852 B] Get:363 http://deb.debian.org/debian unstable/main amd64 libbz2-dev amd64 1.0.8-6+b2 [33.6 kB] Get:364 http://deb.debian.org/debian unstable/main amd64 libext2fs2t64 amd64 1.47.4-1+b1 [224 kB] Get:365 http://deb.debian.org/debian unstable/main amd64 libext2fs-dev amd64 1.47.4-1+b1 [312 kB] Get:366 http://deb.debian.org/debian unstable/main amd64 libxxhash-dev amd64 0.8.3-2+b2 [80.6 kB] Get:367 http://deb.debian.org/debian unstable/main amd64 liblz4-dev amd64 1.10.0-10 [94.9 kB] Get:368 http://deb.debian.org/debian unstable/main amd64 liblzma-dev amd64 5.8.4-1 [391 kB] Get:369 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.2-3 [918 kB] Get:370 http://deb.debian.org/debian unstable/main amd64 libxml2-dev amd64 2.15.4+dfsg-1 [794 kB] Get:371 http://deb.debian.org/debian unstable/main amd64 libzstd-dev amd64 1.5.7+dfsg-4 [371 kB] Get:372 http://deb.debian.org/debian unstable/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-5+b2 [328 kB] Get:373 http://deb.debian.org/debian unstable/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-5+b2 [641 kB] Get:374 http://deb.debian.org/debian unstable/main amd64 nettle-dev amd64 3.10.2-1+b1 [1321 kB] Get:375 http://deb.debian.org/debian unstable/main amd64 libarchive-dev amd64 3.8.9-1 [584 kB] Get:376 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.1-8 [206 kB] Get:377 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.1-8 [2548 kB] Get:378 http://deb.debian.org/debian unstable/main amd64 libarpack2t64 amd64 3.9.1-6+b2 [105 kB] Get:379 http://deb.debian.org/debian unstable/main amd64 libsuperlu7 amd64 7.0.1+dfsg1-2+b2 [174 kB] Get:380 http://deb.debian.org/debian unstable/main amd64 libarmadillo15 amd64 1:15.2.1+dfsg-2 [106 kB] Get:381 http://deb.debian.org/debian unstable/main amd64 libblas-dev amd64 3.12.1-8 [219 kB] Get:382 http://deb.debian.org/debian unstable/main amd64 liblapack-dev amd64 3.12.1-8 [5230 kB] Get:383 http://deb.debian.org/debian unstable/main amd64 libarpack2-dev amd64 3.9.1-6+b2 [119 kB] Get:384 http://deb.debian.org/debian unstable/main amd64 libhdf5-320 amd64 2.2.0+repack-5 [2177 kB] Get:385 http://deb.debian.org/debian unstable/main amd64 libhdf5-fortran-320 amd64 2.2.0+repack-5 [123 kB] Get:386 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-320 amd64 2.2.0+repack-5 [82.0 kB] Get:387 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-fortran-320 amd64 2.2.0+repack-5 [50.1 kB] Get:388 http://deb.debian.org/debian unstable/main amd64 libhdf5-cpp-320 amd64 2.2.0+repack-5 [144 kB] Get:389 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-cpp-320 amd64 2.2.0+repack-5 [27.4 kB] Get:390 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:3.1.3-4 [356 kB] Get:391 http://deb.debian.org/debian unstable/main amd64 libjpeg-dev amd64 1:3.1.3-4 [78.8 kB] Get:392 http://deb.debian.org/debian unstable/main amd64 libbrotli-dev amd64 1.2.0-4+b1 [324 kB] Get:393 http://deb.debian.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.13-stable-1 [183 kB] Get:394 http://deb.debian.org/debian unstable/main amd64 libunbound8 amd64 1.26.1-1 [664 kB] Get:395 http://deb.debian.org/debian unstable/main amd64 libgnutls-dane0t64 amd64 3.8.13-1 [496 kB] Get:396 http://deb.debian.org/debian unstable/main amd64 libidn2-dev amd64 2.3.8-5 [102 kB] Get:397 http://deb.debian.org/debian unstable/main amd64 libp11-kit-dev amd64 0.26.5-1 [226 kB] Get:398 http://deb.debian.org/debian unstable/main amd64 libtasn1-6-dev amd64 4.21.0-2+b1 [98.6 kB] Get:399 http://deb.debian.org/debian unstable/main amd64 libgnutls28-dev amd64 3.8.13-1 [1479 kB] Get:400 http://deb.debian.org/debian unstable/main amd64 libkrb5-dev amd64 1.22.1-3 [14.0 kB] Get:401 http://deb.debian.org/debian unstable/main amd64 libpkgconf7 amd64 2.5.1-4 [47.8 kB] Get:402 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 2.5.1-4 [35.9 kB] Get:403 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 2.5.1-4 [33.6 kB] Get:404 http://deb.debian.org/debian unstable/main amd64 libnghttp2-dev amd64 1.70.0-1 [131 kB] Get:405 http://deb.debian.org/debian unstable/main amd64 libnghttp3-dev amd64 1.17.0-1 [96.3 kB] Get:406 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls-dev amd64 1.24.0-1 [24.0 kB] Get:407 http://deb.debian.org/debian unstable/main amd64 libngtcp2-dev amd64 1.24.0-1 [204 kB] Get:408 http://deb.debian.org/debian unstable/main amd64 libunistring-dev amd64 1.4.2-1 [651 kB] Get:409 http://deb.debian.org/debian unstable/main amd64 libpsl-dev amd64 0.23.3-1 [30.1 kB] Get:410 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.6-1 [60.3 kB] Get:411 http://deb.debian.org/debian unstable/main amd64 librtmp-dev amd64 2.6-1 [69.7 kB] Get:412 http://deb.debian.org/debian unstable/main amd64 libssl-dev amd64 3.6.4-1 [3156 kB] Get:413 http://deb.debian.org/debian unstable/main amd64 libssh2-1-dev amd64 1.11.1-6 [402 kB] Get:414 http://deb.debian.org/debian unstable/main amd64 libcurl4-gnutls-dev amd64 8.23.0~rc1-2 [593 kB] Get:415 http://deb.debian.org/debian unstable/main amd64 libhdf5-dev amd64 2.2.0+repack-5 [4248 kB] Get:416 http://deb.debian.org/debian unstable/main amd64 libsuperlu-dev amd64 7.0.1+dfsg1-2+b2 [21.6 kB] Get:417 http://deb.debian.org/debian unstable/main amd64 libarmadillo-dev amd64 1:15.2.1+dfsg-2 [422 kB] Get:418 http://deb.debian.org/debian unstable/main amd64 libaspell15 amd64 0.60.8.2-3+b1 [339 kB] Get:419 http://deb.debian.org/debian unstable/main amd64 libgpg-error-dev amd64 1.61-5 [154 kB] Get:420 http://deb.debian.org/debian unstable/main amd64 libassuan-dev amd64 3.0.2-2+b2 [119 kB] Get:421 http://deb.debian.org/debian unstable/main amd64 libva2 amd64 2.24.1-2 [83.5 kB] Get:422 http://deb.debian.org/debian unstable/main amd64 libva-drm2 amd64 2.24.1-2 [18.0 kB] Get:423 http://deb.debian.org/debian unstable/main amd64 libva-x11-2 amd64 2.24.1-2 [22.9 kB] Get:424 http://deb.debian.org/debian unstable/main amd64 libvdpau1 amd64 1.5-4+b1 [26.1 kB] Get:425 http://deb.debian.org/debian unstable/main amd64 libvpl2 amd64 1:2.17.0-1 [145 kB] Get:426 http://deb.debian.org/debian unstable/main amd64 libavutil61 amd64 7:9.0.2-1 [463 kB] Get:427 http://deb.debian.org/debian unstable/main amd64 libcodec2-1.2 amd64 1.2.0-5 [8195 kB] Get:428 http://deb.debian.org/debian unstable/main amd64 libgsm1 amd64 1.0.24-1 [29.3 kB] Get:429 http://deb.debian.org/debian unstable/main amd64 libmpg123-0t64 amd64 1.33.7-1 [154 kB] Get:430 http://deb.debian.org/debian unstable/main amd64 libmp3lame0 amd64 4.0-1 [289 kB] Get:431 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7 amd64 2.5.4-1.1 [205 kB] Get:432 http://deb.debian.org/debian unstable/main amd64 libopus0 amd64 1.6.1-1+b1 [3484 kB] Get:433 http://deb.debian.org/debian unstable/main amd64 libshine3 amd64 3.1.1-4 [22.9 kB] Get:434 http://deb.debian.org/debian unstable/main amd64 libsnappy1v5 amd64 1.3.1-3 [32.1 kB] Get:435 http://deb.debian.org/debian unstable/main amd64 libspeex1 amd64 1.2.1-3+b2 [59.5 kB] Get:436 http://deb.debian.org/debian unstable/main amd64 libsoxr0 amd64 0.1.3-4.1+b1 [81.3 kB] Get:437 http://deb.debian.org/debian unstable/main amd64 libswresample7 amd64 7:9.0.2-1 [110 kB] Get:438 http://deb.debian.org/debian unstable/main amd64 libtheoradec2 amd64 1.2.0+dfsg-6+b2 [58.6 kB] Get:439 http://deb.debian.org/debian unstable/main amd64 libogg0 amd64 1.3.6-2+b1 [24.0 kB] Get:440 http://deb.debian.org/debian unstable/main amd64 libtheoraenc2 amd64 1.2.0+dfsg-6+b2 [117 kB] Get:441 http://deb.debian.org/debian unstable/main amd64 libtwolame0 amd64 0.4.0-3 [50.9 kB] Get:442 http://deb.debian.org/debian unstable/main amd64 libvorbis0a amd64 1.3.7-3+b2 [93.2 kB] Get:443 http://deb.debian.org/debian unstable/main amd64 libvorbisenc2 amd64 1.3.7-3+b2 [76.1 kB] Get:444 http://deb.debian.org/debian unstable/main amd64 libvpx12 amd64 1.17.0-1 [1154 kB] Get:445 http://deb.debian.org/debian unstable/main amd64 libwebpmux3 amd64 1.6.0-0.1 [127 kB] Get:446 http://deb.debian.org/debian unstable/main amd64 libx264-165 amd64 2:0.165.3223+git20250910.0480cb0-1+b1 [556 kB] Get:447 http://deb.debian.org/debian unstable/main amd64 libx265-216 amd64 4.2-3 [1241 kB] Get:448 http://deb.debian.org/debian unstable/main amd64 libxvidcore4 amd64 2:1.3.7-3+b2 [249 kB] Get:449 http://deb.debian.org/debian unstable/main amd64 libzvbi-common all 0.2.45-1 [70.8 kB] Get:450 http://deb.debian.org/debian unstable/main amd64 libzvbi0t64 amd64 0.2.45-1 [289 kB] Get:451 http://deb.debian.org/debian unstable/main amd64 libavcodec63 amd64 7:9.0.2-1 [7740 kB] Get:452 http://deb.debian.org/debian unstable/main amd64 libavutil-dev amd64 7:9.0.2-1 [630 kB] Get:453 http://deb.debian.org/debian unstable/main amd64 libswresample-dev amd64 7:9.0.2-1 [124 kB] Get:454 http://deb.debian.org/debian unstable/main amd64 libavcodec-dev amd64 7:9.0.2-1 [8463 kB] Get:455 http://deb.debian.org/debian unstable/main amd64 libudfread3 amd64 1.2.0-3 [16.7 kB] Get:456 http://deb.debian.org/debian unstable/main amd64 libbluray4 amd64 1:1.5.0-3 [139 kB] Get:457 http://deb.debian.org/debian unstable/main amd64 libchromaprint1 amd64 1.6.1-1+b1 [46.8 kB] Get:458 http://deb.debian.org/debian unstable/main amd64 libdvdread8t64 amd64 7.1.1-1 [66.4 kB] Get:459 http://deb.debian.org/debian unstable/main amd64 libdvdnav4 amd64 7.0.0-2+b1 [45.8 kB] Get:460 http://deb.debian.org/debian unstable/main amd64 libgme0 amd64 0.6.5-1 [148 kB] Get:461 http://deb.debian.org/debian unstable/main amd64 libvorbisfile3 amd64 1.3.7-3+b2 [21.0 kB] Get:462 http://deb.debian.org/debian unstable/main amd64 libopenmpt0t64 amd64 0.8.9-1 [1124 kB] Get:463 http://deb.debian.org/debian unstable/main amd64 librabbitmq4 amd64 0.18.0-1 [44.4 kB] Get:464 http://deb.debian.org/debian unstable/main amd64 libcjson1 amd64 1.7.19-2+b1 [30.4 kB] Get:465 http://deb.debian.org/debian unstable/main amd64 librist4 amd64 0.2.20+dfsg-1 [142 kB] Get:466 http://deb.debian.org/debian unstable/main amd64 libsrt1.5-gnutls amd64 1.5.7-1 [358 kB] Get:467 http://deb.debian.org/debian unstable/main amd64 libssh-4 amd64 0.12.2-1 [254 kB] Get:468 http://deb.debian.org/debian unstable/main amd64 libavformat63 amd64 7:9.0.2-1 [1372 kB] Get:469 http://deb.debian.org/debian unstable/main amd64 libavformat-dev amd64 7:9.0.2-1 [1598 kB] Get:470 http://deb.debian.org/debian unstable/main amd64 libdav1d-dev amd64 1.5.4-1 [25.9 kB] Get:471 http://deb.debian.org/debian unstable/main amd64 librav1e-dev amd64 0.8.1-11 [14.4 kB] Get:472 http://deb.debian.org/debian unstable/main amd64 libsvtav1enc-dev amd64 4.1.0+dfsg-1 [41.2 kB] Get:473 http://deb.debian.org/debian unstable/main amd64 libyuv-dev amd64 0.0.1971.20260904-2 [240 kB] Get:474 http://deb.debian.org/debian unstable/main amd64 libavif-dev amd64 1.4.2-1 [61.0 kB] Get:475 http://deb.debian.org/debian unstable/main amd64 libb2-1 amd64 0.98.1-1.1+b3 [42.0 kB] Get:476 http://deb.debian.org/debian unstable/main amd64 libblosc1 amd64 1.21.5+ds-2+b2 [48.0 kB] Get:477 http://deb.debian.org/debian unstable/main amd64 libblosc-dev amd64 1.21.5+ds-2+b2 [60.0 kB] Get:478 http://deb.debian.org/debian unstable/main amd64 libboost1.90-dev amd64 1.90.0-6.1+b1 [11.3 MB] Get:479 http://deb.debian.org/debian unstable/main amd64 libcfitsio10t64 amd64 4.7.0-2 [607 kB] Get:480 http://deb.debian.org/debian unstable/main amd64 libcfitsio-dev amd64 4.7.0-2 [675 kB] Get:481 http://deb.debian.org/debian unstable/main amd64 libcommons-parent-java all 56-1 [10.8 kB] Get:482 http://deb.debian.org/debian unstable/main amd64 libcommons-logging-java all 1.3.0-2 [68.6 kB] Get:483 http://deb.debian.org/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.23.0~rc1-2 [17.9 kB] Get:484 http://deb.debian.org/debian unstable/main amd64 libdeflate-dev amd64 1.25-1 [56.7 kB] Get:485 http://deb.debian.org/debian unstable/main amd64 libdouble-conversion3 amd64 3.4.0-1+b1 [40.7 kB] Get:486 http://deb.debian.org/debian unstable/main amd64 libduktape207 amd64 2.7.0-2+b3 [134 kB] Get:487 http://deb.debian.org/debian unstable/main amd64 libegl-mesa0 amd64 26.2.3-2 [140 kB] Get:488 http://deb.debian.org/debian unstable/main amd64 libeigen3-dev all 5.0.1-3 [1192 kB] Get:489 http://deb.debian.org/debian unstable/main amd64 libhunspell-1.7-0 amd64 1.7.3+really1.7.3-5 [229 kB] Get:490 http://deb.debian.org/debian unstable/main amd64 libenchant-2-2 amd64 2.8.16+dfsg-4 [67.4 kB] Get:491 http://deb.debian.org/debian unstable/main amd64 libevdev2 amd64 1.13.7+dfsg-1 [33.2 kB] Get:492 http://deb.debian.org/debian unstable/main amd64 libevent-extra-2.1-7t64 amd64 2.1.13-stable-1 [108 kB] Get:493 http://deb.debian.org/debian unstable/main amd64 libevent-openssl-2.1-7t64 amd64 2.1.13-stable-1 [60.9 kB] Get:494 http://deb.debian.org/debian unstable/main amd64 libevent-dev amd64 2.1.13-stable-1 [307 kB] Get:495 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.8.4-2 [186 kB] Get:496 http://deb.debian.org/debian unstable/main amd64 libexprtk-dev all 0.0.3-4 [121 kB] Get:497 http://deb.debian.org/debian unstable/main amd64 libfftw3-double3 amd64 3.3.11-1 [713 kB] Get:498 http://deb.debian.org/debian unstable/main amd64 libfftw3-long3 amd64 3.3.11-1 [313 kB] Get:499 http://deb.debian.org/debian unstable/main amd64 libfftw3-quad3 amd64 3.3.11-1 [554 kB] Get:500 http://deb.debian.org/debian unstable/main amd64 libfftw3-single3 amd64 3.3.11-1 [738 kB] Get:501 http://deb.debian.org/debian unstable/main amd64 libfftw3-bin amd64 3.3.11-1 [46.6 kB] Get:502 http://deb.debian.org/debian unstable/main amd64 libfftw3-dev amd64 3.3.11-1 [2063 kB] Get:503 http://deb.debian.org/debian unstable/main amd64 libfontbox-java all 1:1.8.16-5 [211 kB] Get:504 http://deb.debian.org/debian unstable/main amd64 libpng-dev amd64 1.6.58-1 [372 kB] Get:505 http://deb.debian.org/debian unstable/main amd64 libfreetype-dev amd64 2.14.3+dfsg-2 [663 kB] Get:506 http://deb.debian.org/debian unstable/main amd64 uuid-dev amd64 2.42.4-1 [46.0 kB] Get:507 http://deb.debian.org/debian unstable/main amd64 libfontconfig-dev amd64 2.17.1-5 [155 kB] Get:508 http://deb.debian.org/debian unstable/main amd64 libfontenc1 amd64 1:1.1.8-1+b3 [23.4 kB] Get:509 http://deb.debian.org/debian unstable/main amd64 libminizip1t64 amd64 1:1.3.dfsg+really1.3.2-3 [57.6 kB] Get:510 http://deb.debian.org/debian unstable/main amd64 libfreexl1 amd64 2.0.0-1+b4 [40.7 kB] Get:511 http://deb.debian.org/debian unstable/main amd64 libminizip-dev amd64 1:1.3.dfsg+really1.3.2-3 [66.2 kB] Get:512 http://deb.debian.org/debian unstable/main amd64 libfreexl-dev amd64 2.0.0-1+b4 [42.8 kB] Get:513 http://deb.debian.org/debian unstable/main amd64 libfyba0t64 amd64 4.1.1-11+b2 [114 kB] Get:514 http://deb.debian.org/debian unstable/main amd64 libfyba-dev amd64 4.1.1-11+b2 [170 kB] Get:515 http://deb.debian.org/debian unstable/main amd64 libgeos3.15.0 amd64 3.15.0-1 [1225 kB] Get:516 http://deb.debian.org/debian unstable/main amd64 libgeos-c1t64 amd64 3.15.0-1 [148 kB] Get:517 http://deb.debian.org/debian unstable/main amd64 proj-data all 9.8.1-1 [6352 kB] Get:518 http://deb.debian.org/debian unstable/main amd64 libproj25 amd64 9.8.1-1 [1533 kB] Get:519 http://deb.debian.org/debian unstable/main amd64 libgeotiff5 amd64 1.7.4-2 [68.3 kB] Get:520 http://deb.debian.org/debian unstable/main amd64 libhdf4-0 amd64 4.3.1-3 [299 kB] Get:521 http://deb.debian.org/debian unstable/main amd64 libjson-c5 amd64 0.19+ds-1 [46.7 kB] Get:522 http://deb.debian.org/debian unstable/main amd64 mysql-common all 5.8+1.1.1 [6784 B] Get:523 http://deb.debian.org/debian unstable/main amd64 mariadb-common all 1:11.8.9+ds-4 [24.5 kB] Get:524 http://deb.debian.org/debian unstable/main amd64 libmariadb3 amd64 1:11.8.9+ds-4 [185 kB] Get:525 http://deb.debian.org/debian unstable/main amd64 libmuparser2v5 amd64 2.3.4-2+b1 [152 kB] Get:526 http://deb.debian.org/debian unstable/main amd64 libnetcdf22 amd64 1:4.10.1-1+b1 [556 kB] Get:527 http://deb.debian.org/debian unstable/main amd64 libodbc2 amd64 2.3.14-2 [152 kB] Get:528 http://deb.debian.org/debian unstable/main amd64 unixodbc-common all 2.3.14-2 [6944 B] Get:529 http://deb.debian.org/debian unstable/main amd64 libodbcinst2 amd64 2.3.14-2 [34.2 kB] Get:530 http://deb.debian.org/debian unstable/main amd64 libgpgme45 amd64 2.2.0-2 [360 kB] Get:531 http://deb.debian.org/debian unstable/main amd64 libgpgmepp7 amd64 2.2.0-2 [180 kB] Get:532 http://deb.debian.org/debian unstable/main amd64 libpoppler162 amd64 26.07.0-2 [2266 kB] Get:533 http://deb.debian.org/debian unstable/main amd64 libqhull-r8.0 amd64 2020.2-9 [248 kB] Get:534 http://deb.debian.org/debian unstable/main amd64 librttopo1 amd64 1.1.0-4+b2 [180 kB] Get:535 http://deb.debian.org/debian unstable/main amd64 libspatialite8t64 amd64 5.1.0-4 [1816 kB] Get:536 http://deb.debian.org/debian unstable/main amd64 libxerces-c3.2t64 amd64 3.2.4+debian-1.3+b4 [908 kB] Get:537 http://deb.debian.org/debian unstable/main amd64 libgdal39 amd64 3.13.3+dfsg-1+b1 [12.5 MB] Get:538 http://deb.debian.org/debian unstable/main amd64 libgeos-dev amd64 3.15.0-1 [64.2 kB] Get:539 http://deb.debian.org/debian unstable/main amd64 libsqlite3-dev amd64 3.53.4-2 [1166 kB] Get:540 http://deb.debian.org/debian unstable/main amd64 libjbig-dev amd64 2.1-6.1+b3 [31.4 kB] Get:541 http://deb.debian.org/debian unstable/main amd64 libwebpdemux2 amd64 1.6.0-0.1 [114 kB] Get:542 http://deb.debian.org/debian unstable/main amd64 libwebpdecoder3 amd64 1.6.0-0.1 [232 kB] Get:543 http://deb.debian.org/debian unstable/main amd64 libsharpyuv-dev amd64 1.6.0-0.1 [120 kB] Get:544 http://deb.debian.org/debian unstable/main amd64 libwebp-dev amd64 1.6.0-0.1 [488 kB] Get:545 http://deb.debian.org/debian unstable/main amd64 libtiffxx6 amd64 4.7.2-1 [190 kB] Get:546 http://deb.debian.org/debian unstable/main amd64 liblerc-dev amd64 4.2.0+ds-1 [205 kB] Get:547 http://deb.debian.org/debian unstable/main amd64 libtiff-dev amd64 4.7.2-1 [532 kB] Get:548 http://deb.debian.org/debian unstable/main amd64 libproj-dev amd64 9.8.1-1 [140 kB] Get:549 http://deb.debian.org/debian unstable/main amd64 libgeotiff-dev amd64 1.7.4-2 [97.4 kB] Get:550 http://deb.debian.org/debian unstable/main amd64 libgif-dev amd64 6.1.3-1 [59.3 kB] Get:551 http://deb.debian.org/debian unstable/main amd64 libhdf4-dev amd64 4.3.1-3 [366 kB] Get:552 http://deb.debian.org/debian unstable/main amd64 libheif-dev amd64 1.23.4-1+b1 [76.7 kB] Get:553 http://deb.debian.org/debian unstable/main amd64 libjson-c-dev amd64 0.19+ds-1 [77.2 kB] Get:554 http://deb.debian.org/debian unstable/main amd64 libhwy-dev amd64 1.3.0-5.1 [451 kB] Get:555 http://deb.debian.org/debian unstable/main amd64 liblcms2-dev amd64 2.19.1-1 [2563 kB] Get:556 http://deb.debian.org/debian unstable/main amd64 libjxl-dev amd64 0.11.2-5.1 [191 kB] Get:557 http://deb.debian.org/debian unstable/main amd64 libltdl-dev amd64 2.6.2-3 [171 kB] Get:558 http://deb.debian.org/debian unstable/main amd64 libmariadb-dev amd64 1:11.8.9+ds-4 [273 kB] Get:559 http://deb.debian.org/debian unstable/main amd64 libmariadb-dev-compat amd64 1:11.8.9+ds-4 [23.1 kB] Get:560 http://deb.debian.org/debian unstable/main amd64 libmuparser-dev amd64 2.3.4-2+b1 [33.5 kB] Get:561 http://deb.debian.org/debian unstable/main amd64 libnetcdf-dev amd64 1:4.10.1-1+b1 [125 kB] Get:562 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7-dev amd64 2.5.4-1.1 [240 kB] Get:563 http://deb.debian.org/debian unstable/main amd64 libpcre2-16-0 amd64 10.48-3 [295 kB] Get:564 http://deb.debian.org/debian unstable/main amd64 libpcre2-32-0 amd64 10.48-3 [282 kB] Get:565 http://deb.debian.org/debian unstable/main amd64 libpcre2-posix3 amd64 10.48-3 [67.2 kB] Get:566 http://deb.debian.org/debian unstable/main amd64 libpcre2-dev amd64 10.48-3 [880 kB] Get:567 http://deb.debian.org/debian unstable/main amd64 libgpgme-dev amd64 2.2.0-2 [585 kB] Get:568 http://deb.debian.org/debian unstable/main amd64 libgpgmepp-dev amd64 2.2.0-2 [228 kB] Get:569 http://deb.debian.org/debian unstable/main amd64 libnspr4-dev amd64 2:4.40-1 [212 kB] Get:570 http://deb.debian.org/debian unstable/main amd64 libnss3-dev amd64 2:3.129-1 [211 kB] Get:571 http://deb.debian.org/debian unstable/main amd64 libpoppler-dev amd64 26.07.0-2 [8504 B] Get:572 http://deb.debian.org/debian unstable/main amd64 libpoppler-private-dev amd64 26.07.0-2 [184 kB] Get:573 http://deb.debian.org/debian unstable/main amd64 libqhull8.0 amd64 2020.2-9 [247 kB] Get:574 http://deb.debian.org/debian unstable/main amd64 libqhullcpp8.0 amd64 2020.2-9 [107 kB] Get:575 http://deb.debian.org/debian unstable/main amd64 libqhull-dev amd64 2020.2-9 [523 kB] Get:576 http://deb.debian.org/debian unstable/main amd64 librttopo-dev amd64 1.1.0-4+b2 [222 kB] Get:577 http://deb.debian.org/debian unstable/main amd64 libspatialite-dev amd64 5.1.0-4 [1972 kB] Get:578 http://deb.debian.org/debian unstable/main amd64 liburiparser1 amd64 1.0.1+dfsg-1 [57.3 kB] Get:579 http://deb.debian.org/debian unstable/main amd64 liburiparser-dev amd64 1.0.1+dfsg-1 [31.8 kB] Get:580 http://deb.debian.org/debian unstable/main amd64 libicu-dev amd64 78.3-2 [11.1 MB] Get:581 http://deb.debian.org/debian unstable/main amd64 libxerces-c-dev amd64 3.2.4+debian-1.3+b4 [1721 kB] Get:582 http://deb.debian.org/debian unstable/main amd64 libodbccr2 amd64 2.3.14-2 [16.6 kB] Get:583 http://deb.debian.org/debian unstable/main amd64 unixodbc-dev amd64 2.3.14-2 [233 kB] Get:584 http://deb.debian.org/debian unstable/main amd64 libgdal-dev amd64 3.13.3+dfsg-1+b1 [485 kB] Get:585 http://deb.debian.org/debian unstable/main amd64 xorg-sgml-doctools all 1:1.12.1-1 [23.9 kB] Get:586 http://deb.debian.org/debian unstable/main amd64 x11proto-dev all 2025.1-1 [605 kB] Get:587 http://deb.debian.org/debian unstable/main amd64 libxau-dev amd64 1:1.0.11-1+b2 [23.9 kB] Get:588 http://deb.debian.org/debian unstable/main amd64 libxdmcp-dev amd64 1:1.1.5-2+b1 [44.0 kB] Get:589 http://deb.debian.org/debian unstable/main amd64 xtrans-dev all 1.6.0-1 [93.5 kB] Get:590 http://deb.debian.org/debian unstable/main amd64 libxcb1-dev amd64 1.17.0-2+b2 [181 kB] Get:591 http://deb.debian.org/debian unstable/main amd64 libx11-dev amd64 2:1.8.13-1 [903 kB] Get:592 http://deb.debian.org/debian unstable/main amd64 libglx-dev amd64 1.7.0-3+b1 [15.0 kB] Get:593 http://deb.debian.org/debian unstable/main amd64 libgl-dev amd64 1.7.0-3+b1 [99.8 kB] Get:594 http://deb.debian.org/debian unstable/main amd64 libgl2ps1.4 amd64 1.4.2+dfsg1-4+b1 [43.0 kB] Get:595 http://deb.debian.org/debian unstable/main amd64 libgl2ps-dev amd64 1.4.2+dfsg1-4+b1 [64.1 kB] Get:596 http://deb.debian.org/debian unstable/main amd64 libglew-common-dev amd64 2.3.1+dfsg2-5 [144 kB] Get:597 http://deb.debian.org/debian unstable/main amd64 libglew2.3 amd64 2.3.1+dfsg2-5 [161 kB] Get:598 http://deb.debian.org/debian unstable/main amd64 libopengl0 amd64 1.7.0-3+b1 [30.4 kB] Get:599 http://deb.debian.org/debian unstable/main amd64 libglu1-mesa amd64 9.0.2-1.1+b4 [191 kB] Get:600 http://deb.debian.org/debian unstable/main amd64 libopengl-dev amd64 1.7.0-3+b1 [4580 B] Get:601 http://deb.debian.org/debian unstable/main amd64 libglu1-mesa-dev amd64 9.0.2-1.1+b4 [229 kB] Get:602 http://deb.debian.org/debian unstable/main amd64 libglew-dev amd64 2.3.1+dfsg2-5 [134 kB] Get:603 http://deb.debian.org/debian unstable/main amd64 libgudev-1.0-0 amd64 238-7+b2 [14.4 kB] Get:604 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-fortran-320 amd64 2.2.0+repack-5 [124 kB] Get:605 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-320 amd64 2.2.0+repack-5 [81.9 kB] Get:606 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-fortran-320 amd64 2.2.0+repack-5 [49.9 kB] Get:607 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-cpp-320 amd64 2.2.0+repack-5 [144 kB] Get:608 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-cpp-320 amd64 2.2.0+repack-5 [27.5 kB] Get:609 http://deb.debian.org/debian unstable/main amd64 openmpi-common all 5.0.11-2 [31.4 kB] Get:610 http://deb.debian.org/debian unstable/main amd64 libnl-3-dev amd64 3.12.0-2+b1 [105 kB] Get:611 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-dev amd64 3.12.0-2+b1 [220 kB] Get:612 http://deb.debian.org/debian unstable/main amd64 libibverbs-dev amd64 65.0-1 [759 kB] Get:613 http://deb.debian.org/debian unstable/main amd64 libprrte4 amd64 5.0.0~git.20260918.1-2 [711 kB] Get:614 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1 [319 kB] Get:615 http://deb.debian.org/debian unstable/main amd64 prrte-common all 5.0.0~git.20260918.1-2 [50.2 kB] Get:616 http://deb.debian.org/debian unstable/main amd64 libprrte-dev amd64 5.0.0~git.20260918.1-2 [4258 kB] Get:617 http://deb.debian.org/debian unstable/main amd64 libnuma-dev amd64 2.0.19-1+b2 [36.2 kB] Get:618 http://deb.debian.org/debian unstable/main amd64 libhwloc-dev amd64 2.15.0-2 [273 kB] Get:619 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-ui all 1.14.2+dfsg-1 [245 kB] Get:620 http://deb.debian.org/debian unstable/main amd64 libprrte-bin amd64 5.0.0~git.20260918.1-2 [42.4 kB] Get:621 http://deb.debian.org/debian unstable/main amd64 openmpi-bin amd64 5.0.11-2 [182 kB] Get:622 http://deb.debian.org/debian unstable/main amd64 libopenmpi-dev amd64 5.0.11-2 [1023 kB] Get:623 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-dev amd64 2.2.0+repack-5 [4395 kB] Get:624 http://deb.debian.org/debian unstable/main amd64 mpi-default-dev amd64 1.20 [3504 B] Get:625 http://deb.debian.org/debian unstable/main amd64 libhdf5-mpi-dev amd64 2.2.0+repack-5 [21.6 kB] Get:626 http://deb.debian.org/debian unstable/main amd64 libice-dev amd64 2:1.1.1-1+b2 [75.3 kB] Get:627 http://deb.debian.org/debian unstable/main amd64 libwacom-common all 2.20.0-1 [119 kB] Get:628 http://deb.debian.org/debian unstable/main amd64 libwacom9 amd64 2.20.0-1 [26.5 kB] Get:629 http://deb.debian.org/debian unstable/main amd64 libinput-bin amd64 1.31.3-1 [28.0 kB] Get:630 http://deb.debian.org/debian unstable/main amd64 libmtdev1t64 amd64 1.1.7-1+b2 [23.2 kB] Get:631 http://deb.debian.org/debian unstable/main amd64 libinput10 amd64 1.31.3-1 [160 kB] Get:632 http://deb.debian.org/debian unstable/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get:633 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 9.1.0-8 [46.1 kB] Get:634 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.8~dfsg+~1.13.0-1 [84.1 kB] Get:635 http://deb.debian.org/debian unstable/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Get:636 http://deb.debian.org/debian unstable/main amd64 libjsoncpp-dev amd64 1.9.8-2 [114 kB] Get:637 http://deb.debian.org/debian unstable/main amd64 libkim-api2 amd64 2.4.1-3+b2 [579 kB] Get:638 http://deb.debian.org/debian unstable/main amd64 libkim-api-dev amd64 2.4.1-3+b2 [106 kB] Get:639 http://deb.debian.org/debian unstable/main amd64 libmd4c0 amd64 0.5.3-1 [49.5 kB] Get:640 http://deb.debian.org/debian unstable/main amd64 libogg-dev amd64 1.3.6-2+b1 [209 kB] Get:641 http://deb.debian.org/debian unstable/main amd64 libpdfbox-java all 1:1.8.16-5 [5527 kB] Get:642 http://deb.debian.org/debian unstable/main amd64 libpnetcdf8 amd64 1.15.0-3 [947 kB] Get:643 http://deb.debian.org/debian unstable/main amd64 libpnetcdf-dev amd64 1.15.0-3 [1169 kB] Get:644 http://deb.debian.org/debian unstable/main amd64 libproxy1v5 amd64 0.5.12-3 [25.1 kB] Get:645 http://deb.debian.org/debian unstable/main amd64 libpython3.14 amd64 3.14.7-4 [2528 kB] Get:646 http://deb.debian.org/debian unstable/main amd64 libpython3.14-dev amd64 3.14.7-4 [5819 kB] Get:647 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.14.7-3 [8492 B] Get:648 http://deb.debian.org/debian unstable/main amd64 libpython3-all-dev amd64 3.14.7-3 [1012 B] Get:649 http://deb.debian.org/debian unstable/main amd64 liburing2 amd64 2.15-1 [29.5 kB] Get:650 http://deb.debian.org/debian unstable/main amd64 libqt6core6t64 amd64 6.11.2+dfsg-5 [2075 kB] Get:651 http://deb.debian.org/debian unstable/main amd64 libqt6concurrent6 amd64 6.11.2+dfsg-5 [38.4 kB] Get:652 http://deb.debian.org/debian unstable/main amd64 libqt6dbus6 amd64 6.11.2+dfsg-5 [294 kB] Get:653 http://deb.debian.org/debian unstable/main amd64 libegl1 amd64 1.7.0-3+b1 [35.0 kB] Get:654 http://deb.debian.org/debian unstable/main amd64 libts0t64 amd64 1.22-1.1+b2 [61.9 kB] Get:655 http://deb.debian.org/debian unstable/main amd64 libxcb-util1 amd64 0.4.1-1+b2 [23.8 kB] Get:656 http://deb.debian.org/debian unstable/main amd64 libxcb-image0 amd64 0.4.0-2+b3 [22.3 kB] Get:657 http://deb.debian.org/debian unstable/main amd64 libxcb-render-util0 amd64 0.3.10-1+b2 [18.7 kB] Get:658 http://deb.debian.org/debian unstable/main amd64 libxcb-cursor0 amd64 0.1.6-1 [17.8 kB] Get:659 http://deb.debian.org/debian unstable/main amd64 libxcb-icccm4 amd64 0.4.2-1+b2 [27.7 kB] Get:660 http://deb.debian.org/debian unstable/main amd64 libxcb-keysyms1 amd64 0.4.1-1+b2 [17.0 kB] Get:661 http://deb.debian.org/debian unstable/main amd64 libxcb-shape0 amd64 1.17.0-2+b2 [106 kB] Get:662 http://deb.debian.org/debian unstable/main amd64 libxcb-xinput0 amd64 1.17.0-2+b2 [130 kB] Get:663 http://deb.debian.org/debian unstable/main amd64 libxcb-xkb1 amd64 1.17.0-2+b2 [130 kB] Get:664 http://deb.debian.org/debian unstable/main amd64 libxkbcommon-x11-0 amd64 1.13.1-1 [21.0 kB] Get:665 http://deb.debian.org/debian unstable/main amd64 libqt6gui6 amd64 6.11.2+dfsg-5 [3516 kB] Get:666 http://deb.debian.org/debian unstable/main amd64 libqt6network6 amd64 6.11.2+dfsg-5 [880 kB] Get:667 http://deb.debian.org/debian unstable/main amd64 libqt6opengl6 amd64 6.11.2+dfsg-5 [462 kB] Get:668 http://deb.debian.org/debian unstable/main amd64 libqt6widgets6 amd64 6.11.2+dfsg-5 [2793 kB] Get:669 http://deb.debian.org/debian unstable/main amd64 libqt6openglwidgets6 amd64 6.11.2+dfsg-5 [47.9 kB] Get:670 http://deb.debian.org/debian unstable/main amd64 libqt6printsupport6 amd64 6.11.2+dfsg-5 [228 kB] Get:671 http://deb.debian.org/debian unstable/main amd64 libqt6sql6 amd64 6.11.2+dfsg-5 [157 kB] Get:672 http://deb.debian.org/debian unstable/main amd64 libqt6test6 amd64 6.11.2+dfsg-5 [201 kB] Get:673 http://deb.debian.org/debian unstable/main amd64 libqt6waylandclient6 amd64 6.11.2+dfsg-5 [387 kB] Get:674 http://deb.debian.org/debian unstable/main amd64 libqt6wlshellintegration6 amd64 6.11.2+dfsg-5 [98.7 kB] Get:675 http://deb.debian.org/debian unstable/main amd64 libqt6xml6 amd64 6.11.2+dfsg-5 [88.2 kB] Get:676 http://deb.debian.org/debian unstable/main amd64 libsm-dev amd64 2:1.2.6-1+b2 [40.3 kB] Get:677 http://deb.debian.org/debian unstable/main amd64 libswscale10 amd64 7:9.0.2-1 [564 kB] Get:678 http://deb.debian.org/debian unstable/main amd64 libswscale-dev amd64 7:9.0.2-1 [623 kB] Get:679 http://deb.debian.org/debian unstable/main amd64 libsymspg2 amd64 2.7.0-1+b2 [199 kB] Get:680 http://deb.debian.org/debian unstable/main amd64 libsymspg-dev amd64 2.7.0-1+b2 [37.3 kB] Get:681 http://deb.debian.org/debian unstable/main amd64 libtbbbind-2-5 amd64 2023.1.0-3 [13.2 kB] Get:682 http://deb.debian.org/debian unstable/main amd64 libtbbmalloc2 amd64 2023.1.0-3 [51.0 kB] Get:683 http://deb.debian.org/debian unstable/main amd64 libtbb12 amd64 2023.1.0-3 [101 kB] Get:684 http://deb.debian.org/debian unstable/main amd64 libtbb-dev amd64 2023.1.0-3 [209 kB] Get:685 http://deb.debian.org/debian unstable/main amd64 libtheora1 amd64 1.2.0+dfsg-6+b2 [143 kB] Get:686 http://deb.debian.org/debian unstable/main amd64 libtheora-dev amd64 1.2.0+dfsg-6+b2 [176 kB] Get:687 http://deb.debian.org/debian unstable/main amd64 libutfcpp-dev all 4.2.1-1 [13.4 kB] Get:688 http://deb.debian.org/debian unstable/main amd64 libvoro++1 amd64 0.5+revert-to-0.4.6+dfsg1-1 [127 kB] Get:689 http://deb.debian.org/debian unstable/main amd64 libvtk9.6 amd64 9.6.2+dfsg1-6+b1 [52.4 MB] Get:690 http://deb.debian.org/debian unstable/main amd64 libvtk9.6-qt amd64 9.6.2+dfsg1-6+b1 [248 kB] Get:691 http://deb.debian.org/debian unstable/main amd64 libvtk9-java amd64 9.6.2+dfsg1-6+b1 [6898 kB] Get:692 http://deb.debian.org/debian unstable/main amd64 libxrender-dev amd64 1:0.9.12-1+b2 [38.8 kB] Get:693 http://deb.debian.org/debian unstable/main amd64 libxfixes-dev amd64 1:6.0.0-2+b5 [22.4 kB] Get:694 http://deb.debian.org/debian unstable/main amd64 libxcursor-dev amd64 1:1.2.3-1+b2 [51.7 kB] Get:695 http://deb.debian.org/debian unstable/main amd64 libxft-dev amd64 2.3.6-1+b5 [73.6 kB] Get:696 http://deb.debian.org/debian unstable/main amd64 libxss1 amd64 1:1.2.3-1+b4 [17.0 kB] Get:697 http://deb.debian.org/debian unstable/main amd64 libxext-dev amd64 2:1.3.4-1+b4 [105 kB] Get:698 http://deb.debian.org/debian unstable/main amd64 libxss-dev amd64 1:1.2.3-1+b4 [22.8 kB] Get:699 http://deb.debian.org/debian unstable/main amd64 libxt-dev amd64 1:1.2.1-1.3+b2 [410 kB] Get:700 http://deb.debian.org/debian unstable/main amd64 nlohmann-json3-dev all 3.12.0.really.3.12.0.really.3.11.3-3 [263 kB] Get:701 http://deb.debian.org/debian unstable/main amd64 mpi-default-bin amd64 1.20 [2720 B] Get:702 http://deb.debian.org/debian unstable/main amd64 python3-mpi4py amd64 4.1.2-1+b1 [755 kB] Get:703 http://deb.debian.org/debian unstable/main amd64 python3-vtk9 amd64 9.6.2+dfsg1-6+b1 [10.3 MB] Get:704 http://deb.debian.org/debian unstable/main amd64 vtk9 amd64 9.6.2+dfsg1-6+b1 [56.3 kB] Get:705 http://deb.debian.org/debian unstable/main amd64 libvtk9-dev amd64 9.6.2+dfsg1-6+b1 [4711 kB] Get:706 http://deb.debian.org/debian unstable/main amd64 libvulkan-dev amd64 1.4.357.0-1 [1910 kB] Get:707 http://deb.debian.org/debian unstable/main amd64 qmake6-bin amd64 6.11.2+dfsg-5 [706 kB] Get:708 http://deb.debian.org/debian unstable/main amd64 qtpaths6-bin amd64 6.11.2+dfsg-5 [59.0 kB] Get:709 http://deb.debian.org/debian unstable/main amd64 qtpaths6 amd64 6.11.2+dfsg-5 [31.9 kB] Get:710 http://deb.debian.org/debian unstable/main amd64 qmake6 amd64 6.11.2+dfsg-5 [146 kB] Get:711 http://deb.debian.org/debian unstable/main amd64 qt6-base-dev-tools amd64 6.11.2+dfsg-5 [1158 kB] Get:712 http://deb.debian.org/debian unstable/main amd64 qt6-qpa-plugins amd64 6.11.2+dfsg-5 [94.5 kB] Get:713 http://deb.debian.org/debian unstable/main amd64 qt6-base-dev amd64 6.11.2+dfsg-5 [2040 kB] Get:714 http://deb.debian.org/debian unstable/main amd64 libvtk9-qt-dev amd64 9.6.2+dfsg1-6+b1 [39.8 kB] Get:715 http://deb.debian.org/debian unstable/main amd64 opencl-c-headers all 3.0~2025.07.22-2 [47.6 kB] Get:716 http://deb.debian.org/debian unstable/main amd64 opencl-clhpp-headers all 3.0~2025.07.22-1 [51.0 kB] Get:717 http://deb.debian.org/debian unstable/main amd64 ocl-icd-opencl-dev amd64 2.3.4-1+b1 [8648 B] Get:718 http://deb.debian.org/debian unstable/main amd64 preview-latex-style all 13.2-1.1 [350 kB] Get:719 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 26.2-3 [84.3 kB] Get:720 http://deb.debian.org/debian unstable/main amd64 python3-pyproject-hooks all 1.2.0-2 [11.7 kB] Get:721 http://deb.debian.org/debian unstable/main amd64 python3-wheel all 0.47.0-1 [26.9 kB] Get:722 http://deb.debian.org/debian unstable/main amd64 python3-build all 1.5.1-1 [85.5 kB] Get:723 http://deb.debian.org/debian unstable/main amd64 python3-installer all 1.0.1+dfsg1-3 [19.7 kB] Get:724 http://deb.debian.org/debian unstable/main amd64 pybuild-plugin-pyproject all 7.20260623 [6996 B] Get:725 http://deb.debian.org/debian unstable/main amd64 python-babel-localedata all 2.18.0+git2026-08-12-2 [6377 kB] Get:726 http://deb.debian.org/debian unstable/main amd64 python3-alabaster all 1.0.0-2 [20.4 kB] Get:727 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.14.7-3 [984 B] Get:728 http://deb.debian.org/debian unstable/main amd64 python3.14-dev amd64 3.14.7-4 [508 kB] Get:729 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.14.7-3 [26.7 kB] Get:730 http://deb.debian.org/debian unstable/main amd64 python3-all-dev amd64 3.14.7-3 [1008 B] Get:731 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.16.0-5 [95.2 kB] Get:732 http://deb.debian.org/debian unstable/main amd64 python3-astroid all 4.3.1-3 [224 kB] Get:733 http://deb.debian.org/debian unstable/main amd64 python3-asttokens all 3.0.1-3 [19.9 kB] Get:734 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-4 [13.7 kB] Get:735 http://deb.debian.org/debian unstable/main amd64 python3-babel all 2.18.0+git2026-08-12-2 [120 kB] Get:736 http://deb.debian.org/debian unstable/main amd64 python3-defusedxml all 0.7.1-3 [43.4 kB] Get:737 http://deb.debian.org/debian unstable/main amd64 sphinx-common all 9.1.0-8 [700 kB] Get:738 http://deb.debian.org/debian unstable/main amd64 python3-roman-numerals all 4.1.0-1 [9196 B] Get:739 http://deb.debian.org/debian unstable/main amd64 python3-docutils all 0.23+dfsg-2 [433 kB] Get:740 http://deb.debian.org/debian unstable/main amd64 python3-imagesize all 2.0.1-1 [14.9 kB] Get:741 http://deb.debian.org/debian unstable/main amd64 python3-markupsafe amd64 3.0.3-2+b1 [13.7 kB] Get:742 http://deb.debian.org/debian unstable/main amd64 python3-jinja2 all 3.1.6-4 [106 kB] Get:743 http://deb.debian.org/debian unstable/main amd64 python3-pygments all 2.20.0+dfsg-2 [850 kB] Get:744 http://deb.debian.org/debian unstable/main amd64 python3-certifi all 2026.7.22+ds-1 [9928 B] Get:745 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.7-2+b1 [190 kB] Get:746 http://deb.debian.org/debian unstable/main amd64 python3-idna all 3.19-1 [45.2 kB] Get:747 http://deb.debian.org/debian unstable/main amd64 python3-urllib3 all 2.8.0-1 [125 kB] Get:748 http://deb.debian.org/debian unstable/main amd64 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get:749 http://deb.debian.org/debian unstable/main amd64 python3-requests all 2.34.2-1 [77.6 kB] Get:750 http://deb.debian.org/debian unstable/main amd64 python3-snowballstemmer all 3.1.1-1 [61.9 kB] Get:751 http://deb.debian.org/debian unstable/main amd64 python3-sphinx all 9.1.0-8 [504 kB] Get:752 http://deb.debian.org/debian unstable/main amd64 python3-breathe all 4.36.0-2 [81.0 kB] Get:753 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.3.1-1 [33.3 kB] Get:754 http://deb.debian.org/debian unstable/main amd64 python3-enchant all 3.3.0-1 [38.8 kB] Get:755 http://deb.debian.org/debian unstable/main amd64 python3-executing all 2.2.1-0.1 [25.7 kB] Get:756 http://deb.debian.org/debian unstable/main amd64 python3-ipython-pygments-lexers all 1.1.1-3 [8600 B] Get:757 http://deb.debian.org/debian unstable/main amd64 python3-parso all 0.8.7-1 [68.2 kB] Get:758 http://deb.debian.org/debian unstable/main amd64 python3-typeshed all 0.0~git20260204.516eed0-2 [1789 kB] Get:759 http://deb.debian.org/debian unstable/main amd64 python3-jedi all 0.20.0+ds1-1 [2169 kB] Get:760 http://deb.debian.org/debian unstable/main amd64 python3-traitlets all 5.16.1-1 [71.4 kB] Get:761 http://deb.debian.org/debian unstable/main amd64 python3-matplotlib-inline all 0.2.1-1 [9324 B] Get:762 http://deb.debian.org/debian unstable/main amd64 python3-wcwidth all 0.8.3+dfsg1-1 [114 kB] Get:763 http://deb.debian.org/debian unstable/main amd64 python3-prompt-toolkit all 3.0.53-2 [280 kB] Get:764 http://deb.debian.org/debian unstable/main amd64 python3-pure-eval all 0.2.3-2 [11.5 kB] Get:765 http://deb.debian.org/debian unstable/main amd64 python3-stack-data all 0.6.3-4 [21.3 kB] Get:766 http://deb.debian.org/debian unstable/main amd64 python3-ptyprocess all 0.7.0-7 [14.0 kB] Get:767 http://deb.debian.org/debian unstable/main amd64 python3-pexpect all 4.9-5 [54.8 kB] Get:768 http://deb.debian.org/debian unstable/main amd64 python3-ipython all 9.11.0-3 [436 kB] Get:769 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.1-2 [8184 B] Get:770 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 11.1.0-3 [74.7 kB] Get:771 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get:772 http://deb.debian.org/debian unstable/main amd64 python3-pip-whl all 26.1.2+dfsg-1 [1463 kB] Get:773 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.23.0-2 [10.2 kB] Get:774 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 84.0.0-2 [560 kB] Get:775 http://deb.debian.org/debian unstable/main amd64 python3-setuptools-whl all 84.0.0-2 [859 kB] Get:776 http://deb.debian.org/debian unstable/main amd64 python3-sphinx-design all 0.7.0-5 [886 kB] Get:777 http://deb.debian.org/debian unstable/main amd64 python3-sphinx-tabs all 3.4.7-3 [14.9 kB] Get:778 http://deb.debian.org/debian unstable/main amd64 python3-sphinxcontrib.jquery all 4.1-7 [7652 B] Get:779 http://deb.debian.org/debian unstable/main amd64 python3-sphinxcontrib.spelling all 8.0.2-1 [12.4 kB] Get:780 http://deb.debian.org/debian unstable/main amd64 python3.14-venv amd64 3.14.7-4 [5460 B] Get:781 http://deb.debian.org/debian unstable/main amd64 python3-venv amd64 3.14.7-3 [1180 B] Get:782 http://deb.debian.org/debian unstable/main amd64 sphinx-rtd-theme-common all 3.1.0+dfsg-3 [916 kB] Get:783 http://deb.debian.org/debian unstable/main amd64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get:784 http://deb.debian.org/debian unstable/main amd64 xfonts-utils amd64 1:7.7+7 [93.3 kB] Get:785 http://deb.debian.org/debian unstable/main amd64 tex-gyre all 20180621-8 [6208 kB] Get:786 http://deb.debian.org/debian unstable/main amd64 texlive-fonts-recommended all 2026.20260911-1 [4992 kB] Get:787 http://deb.debian.org/debian unstable/main amd64 texlive-latex-recommended all 2026.20260911-1 [8458 kB] Get:788 http://deb.debian.org/debian unstable/main amd64 texlive-pictures all 2026.20260911-1 [23.9 MB] Get:789 http://deb.debian.org/debian unstable/main amd64 texlive-latex-extra all 2026.20260911-1 [33.0 MB] Get:790 http://deb.debian.org/debian unstable/main amd64 voro++-dev amd64 0.5+revert-to-0.4.6+dfsg1-1 [155 kB] Preconfiguring packages ... 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Adding 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' Unpacking libext2fs2t64:amd64 (1.47.4-1+b1) ... Selecting previously unselected package libext2fs-dev:amd64. Preparing to unpack .../346-libext2fs-dev_1.47.4-1+b1_amd64.deb ... Unpacking libext2fs-dev:amd64 (1.47.4-1+b1) ... Selecting previously unselected package libxxhash-dev:amd64. Preparing to unpack .../347-libxxhash-dev_0.8.3-2+b2_amd64.deb ... Unpacking libxxhash-dev:amd64 (0.8.3-2+b2) ... Selecting previously unselected package liblz4-dev:amd64. 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Setting up libopengl0:amd64 (1.7.0-3+b1) ... Setting up libelf1t64:amd64 (0.196-1) ... Setting up python-babel-localedata (2.18.0+git2026-08-12-2) ... Setting up libxcb-util1:amd64 (0.4.1-1+b2) ... Setting up libtheoraenc2:amd64 (1.2.0+dfsg-6+b2) ... Setting up libsnappy1v5:amd64 (1.3.1-3) ... Setting up libxcb-xkb1:amd64 (1.17.0-2+b2) ... Setting up libxcb-image0:amd64 (0.4.0-2+b3) ... Setting up libkrb5support0:amd64 (1.22.1-3) ... Setting up libaom-dev:amd64 (3.14.1-1) ... Setting up librav1e0.8:amd64 (0.8.1-11) ... Setting up librist4:amd64 (0.2.20+dfsg-1) ... Setting up tzdata (2026c-1) ... Current default time zone: 'Etc/UTC' Local time is now: Sat Sep 26 04:03:45 UTC 2026. Universal Time is now: Sat Sep 26 04:03:45 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libicu78:amd64 (78.3-2) ... Setting up libxcb-present0:amd64 (1.17.0-2+b2) ... Setting up liberror-perl (0.17030-1) ... Setting up mariadb-common (1:11.8.9+ds-4) ... update-alternatives: using /etc/mysql/mariadb.cnf to provide /etc/mysql/my.cnf (my.cnf) in auto mode Setting up libsymspg2:amd64 (2.7.0-1+b2) ... Setting up libasound2-data (1.2.16.1-1) ... Setting up libvpx12:amd64 (1.17.0-1) ... Setting up libpgm-5.3-0t64:amd64 (5.3.128~dfsg-3) ... Setting up xtrans-dev (1.6.0-1) ... Setting up libfontenc1:amd64 (1:1.1.8-1+b3) ... Setting up autotools-dev (20240727.1+nmu1) ... Setting up libz3-4:amd64 (4.13.3-1.1) ... Setting up libpcre2-32-0:amd64 (10.48-3) ... Setting up libglib2.0-0t64:amd64 (2.90.0-1) ... Setting up libblas3:amd64 (3.12.1-8) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libunbound8:amd64 (1.26.1-1) ... Setting up libutfcpp-dev (4.2.1-1) ... Setting up libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-5+b2) ... Setting up libasound2t64:amd64 (1.2.16.1-1) ... Setting up libexpat1-dev:amd64 (2.8.4-2) ... Setting up libabsl20260526:amd64 (20260526.0-2+b1) ... Setting up libjpeg62-turbo:amd64 (1:3.1.3-4) ... Setting up emacsen-common (3.0.8) ... Setting up libzzip-0-13t64:amd64 (0.13.78+dfsg.1-0.2+b1) ... Setting up libgnutls-dane0t64:amd64 (3.8.13-1) ... Setting up libva2:amd64 (2.24.1-2) ... Setting up libsqlite3-dev:amd64 (3.53.4-2) ... Setting up libproc2-1:amd64 (2:4.0.7-1) ... Setting up libzfp1t64:amd64 (1.0.1-5+b1) ... Setting up libx11-data (2:1.8.13-1) ... Setting up libgpg-error-dev:amd64 (1.61-5) ... Setting up libjpeg62-turbo-dev:amd64 (1:3.1.3-4) ... Setting up libepoxy0:amd64 (1.5.10-2+b2) ... Setting up libnspr4:amd64 (2:4.40-1) ... Setting up libxcb-sync1:amd64 (1.17.0-2+b2) ... Setting up librtmp1:amd64 (2.6-1) ... Setting up libteckit0:amd64 (2.5.13+ds-2) ... Setting up libjsoncpp26:amd64 (1.9.8-2) ... Setting up htmldoc-common (1.9.24-1) ... Setting up libldap-dev:amd64 (2.6.14+dfsg-2+b1) ... Setting up uuid-dev:amd64 (2.42.4-1) ... Setting up libpathplan4:amd64 (14.1.2-1+b4) ... Setting up libxcb-cursor0:amd64 (0.1.6-1) ... Setting up libapache-pom-java (33-2) ... Setting up libavahi-common-data:amd64 (0.8-18) ... Setting up libdbus-1-3:amd64 (1.16.2-5+b1) ... Setting up xfonts-encodings (1:1.0.4-2.2) ... Setting up libfftw3-quad3:amd64 (3.3.11-1) ... Setting up libfribidi0:amd64 (1.0.16-5+b1) ... Setting up libopus0:amd64 (1.6.1-1+b1) ... Setting up t1utils (1.41-4) ... Setting up shared-mime-info (2.4-5+b3) ... Setting up libtexlua53-5:amd64 (2026.20260303.78225+ds-5) ... Setting up libimagequant0:amd64 (4.4.1-1+b2) ... Setting up comerr-dev:amd64 (2.1-1.47.4-1+b1) ... Setting up fonts-dejavu-mono (2.37-9) ... Setting up libssl-dev:amd64 (3.6.4-1) ... Setting up libpng16-16t64:amd64 (1.6.58-1) ... Setting up libhwloc15:amd64 (2.15.0-2) ... Setting up libvorbis0a:amd64 (1.3.7-3+b2) ... Setting up autopoint (1.0-5) ... Setting up libmpfi0:amd64 (1.5.4+ds-5) ... Setting up icu-devtools (78.3-2) ... Setting up libmariadb3:amd64 (1:11.8.9+ds-4) ... Setting up fonts-dejavu-core (2.37-9) ... Setting up unixodbc-common (2.3.14-2) ... Setting up libassuan-dev (3.0.2-2+b2) ... Setting up libqhullcpp8.0:amd64 (2020.2-9) ... Setting up libpcsclite1:amd64 (2.5.2-1) ... Setting up pkgconf-bin (2.5.1-4) ... Setting up libsensors5:amd64 (1:3.6.2-2+b2) ... Setting up liblerc-dev:amd64 (4.2.0+ds-1) ... Setting up libk5crypto3:amd64 (1.22.1-3) ... Setting up libltdl7:amd64 (2.6.2-3) ... Setting up libsvtav1enc4:amd64 (4.1.0+dfsg-1) ... Setting up opencl-c-headers (3.0~2025.07.22-2) ... Setting up libidn2-dev:amd64 (2.3.8-5) ... Setting up libfftw3-double3:amd64 (3.3.11-1) ... Setting up libjs-sphinxdoc (9.1.0-8) ... Setting up libqhull-dev:amd64 (2020.2-9) ... Setting up libkpathsea6:amd64 (2026.20260303.78225+ds-5) ... Setting up libblosc2-7:amd64 (2.23.1+ds-2) ... Setting up libgfortran5:amd64 (16.2.0-3) ... Setting up libvulkan1:amd64 (1.4.357.0-1) ... Setting up autoconf (2.73-2) ... Setting up libnghttp3-9:amd64 (1.17.0-1) ... Setting up libxxhash-dev:amd64 (0.8.3-2+b2) ... Setting up libcgraph8:amd64 (14.1.2-1+b4) ... Setting up libwebp7:amd64 (1.6.0-0.1) ... Setting up libnghttp3-dev:amd64 (1.17.0-1) ... Setting up liblcms2-dev:amd64 (2.19.1-1) ... Setting up liblzma-dev:amd64 (5.8.4-1) ... Setting up libhwy-dev:amd64 (1.3.0-5.1) ... Setting up libgif7:amd64 (6.1.3-1) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.2-3) ... Setting up libodbc2:amd64 (2.3.14-2) ... Setting up libgav1-2:amd64 (0.20.0-2+b2) ... Setting up liburiparser1:amd64 (1.0.1+dfsg-1) ... Setting up libgeos3.15.0:amd64 (3.15.0-1) ... Setting up libnuma1:amd64 (2.0.19-1+b2) ... Setting up libgvpr2:amd64 (14.1.2-1+b4) ... Setting up libpcre2-posix3:amd64 (10.48-3) ... Setting up libfyba0t64:amd64 (4.1.1-11+b2) ... Setting up dwz (0.17-1) ... Setting up libsrt1.5-gnutls:amd64 (1.5.7-1) ... Setting up librav1e-dev:amd64 (0.8.1-11) ... Setting up libdav1d7:amd64 (1.5.4-1) ... Setting up libmtdev1t64:amd64 (1.1.7-1+b2) ... Setting up sensible-utils (0.0.26) ... Setting up libminizip1t64:amd64 (1:1.3.dfsg+really1.3.2-3) ... Setting up ocl-icd-libopencl1:amd64 (2.3.4-1+b1) ... Setting up libgif-dev:amd64 (6.1.3-1) ... Setting up libduktape207:amd64 (2.7.0-2+b3) ... Setting up libxshmfence1:amd64 (1.3.3-1+b2) ... Setting up at-spi2-common (2.62.0-2) ... Setting up cfortran (20210827-1.1) ... Setting up libtiff6:amd64 (4.7.2-1) ... Setting up libxcb-randr0:amd64 (1.17.0-2+b2) ... Setting up dbus-session-bus-common (1.16.2-5) ... Setting up libuchardet0:amd64 (0.0.8-2+b2) ... Setting up procps (2:4.0.7-1) ... Setting up libjson-perl (4.10000-1) ... Setting up libblosc1:amd64 (1.21.5+ds-2+b2) ... Setting up libnl-3-200:amd64 (3.12.0-2+b1) ... Setting up libpsm2-2 (11.2.185-2.1) ... Setting up openmpi-common (5.0.11-2) ... Setting up cpp-16-for-host:amd64 (16.2.0-3) ... Setting up libmd4c0:amd64 (0.5.3-1) ... Setting up libext2fs2t64:amd64 (1.47.4-1+b1) ... Setting up libboost1.90-dev:amd64 (1.90.0-6.1+b1) ... Setting up fonts-lmodern (2.005-2) ... Setting up libopenjp2-7:amd64 (2.5.4-1.1) ... Setting up git-man (1:2.55.0-1) ... Setting up libx11-6:amd64 (2:1.8.13-1) ... Setting up libthai-data (0.1.30-3) ... Setting up xorg-sgml-doctools (1:1.12.1-1) ... Setting up netbase (6.6) ... Configuration file '/etc/services' ==> Modified locally since installation. ==> Package distributor has shipped an updated version. ==> Using current old file as requested. Setting up libngtcp2-16:amd64 (1.24.0-1) ... Setting up sgml-base (1.31+nmu1) ... Setting up libx265-216:amd64 (4.2-3) ... Setting up librhash1:amd64 (1.4.6-1.1+b1) ... Setting up libkrb5-3:amd64 (1.22.1-3) ... Setting up libevent-core-2.1-7t64:amd64 (2.1.13-stable-1) ... Setting up libglu1-mesa:amd64 (9.0.2-1.1+b4) ... Setting up libwayland-egl1:amd64 (1.26.0-1) ... Setting up libexprtk-dev (0.0.3-4) ... Setting up libclang-common-21-dev:amd64 (1:21.1.8-13) ... Setting up libpaper2:amd64 (2.2.5-0.4) ... Setting up libssh2-1t64:amd64 (1.11.1-6) ... Setting up nlohmann-json3-dev (3.12.0.really.3.12.0.really.3.11.3-3) ... Setting up libmuparser2v5:amd64 (2.3.4-2+b1) ... Setting up libopengl-dev:amd64 (1.7.0-3+b1) ... Setting up libjs-jquery (3.7.1+dfsg+~3.5.33-1) ... Setting up libhunspell-1.7-0:amd64 (1.7.3+really1.7.3-5) ... Setting up libfuse3-4:amd64 (3.18.3-1) ... Setting up liburing2:amd64 (2.15-1) ... Setting up dbus-system-bus-common (1.16.2-5) ... Setting up libfido2-1:amd64 (1.17.0-2) ... Setting up libde265-0:amd64 (1.1.3-1+b1) ... Setting up libsharpyuv-dev:amd64 (1.6.0-0.1) ... Setting up libext2fs-dev:amd64 (1.47.4-1+b1) ... Setting up libvoro++1 (0.5+revert-to-0.4.6+dfsg1-1) ... Setting up libgpgme45:amd64 (2.2.0-2) ... Setting up libtasn1-6-dev:amd64 (4.21.0-2+b1) ... Setting up openssl (3.6.4-1) ... Setting up libwebpmux3:amd64 (1.6.0-0.1) ... Setting up libsodium26:amd64 (1.0.22-2) ... Setting up libbsd0:amd64 (0.12.2-3) ... Setting up libtiffxx6:amd64 (4.7.2-1) ... Setting up libdeflate-dev:amd64 (1.25-1) ... Setting up libdrm-common (2.4.134-3) ... Setting up libyuv0:amd64 (0.0.1971.20260904-2) ... Setting up libxcomposite1:amd64 (1:0.4.6-1+b2) ... Setting up libarchive13t64:amd64 (3.8.9-1) ... Setting up libjxl0.11:amd64 (0.11.2-5.1) ... Setting up libjson-c5:amd64 (0.19+ds-1) ... Setting up libevdev2:amd64 (1.13.7+dfsg-1) ... Setting up libicu-dev:amd64 (78.3-2) ... Setting up fonts-font-awesome (7.3.0+dfsg-1) ... Setting up sphinx-rtd-theme-common (3.1.0+dfsg-3) ... Setting up xdg-utils (1.2.1-2) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up dbus-bin (1.16.2-5+b1) ... Setting up libbrotli-dev:amd64 (1.2.0-4+b1) ... Setting up libgudev-1.0-0:amd64 (238-7+b2) ... Setting up libfmt10:amd64 (10.1.1+ds1-4+b2) ... Setting up libzvbi-common (0.2.45-1) ... Setting up libngtcp2-crypto-gnutls8:amd64 (1.24.0-1) ... Setting up libp11-kit-dev:amd64 (0.26.5-1) ... Setting up libmp3lame0:amd64 (4.0-1) ... Setting up libblas-dev:amd64 (3.12.1-8) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up libsz2:amd64 (1.1.7-1) ... Setting up libvorbisenc2:amd64 (1.3.7-3+b2) ... Setting up libsynctex2:amd64 (2026.20260303.78225+ds-5) ... Setting up libdvdnav4:amd64 (7.0.0-2+b1) ... Setting up libjs-underscore (1.13.8~dfsg+~1.13.0-1) ... Setting up libodbccr2:amd64 (2.3.14-2) ... Setting up libacl1-dev:amd64 (2.4.0-1) ... Setting up gdal-plugins:amd64 (3.13.3+dfsg-1+b1) ... Setting up libwacom-common (2.20.0-1) ... Setting up libbz2-dev:amd64 (1.0.8-6+b2) ... Setting up cpp-for-host:amd64 (4:16.1.0-3) ... Setting up libxkbcommon0:amd64 (1.13.1-1) ... Setting up prrte-common (5.0.0~git.20260918.1-2) ... Setting up libpotrace0:amd64 (1.16-2+b3) ... Setting up libwayland-client0:amd64 (1.26.0-1) ... Setting up automake (1:1.19-2) ... update-alternatives: using /usr/bin/automake-1.19 to provide /usr/bin/automake (automake) in auto mode Setting up x11proto-dev (2025.1-1) ... Setting up libfile-stripnondeterminism-perl (1.15.1-1) ... Setting up bubblewrap (0.13.0-1) ... Setting up libnspr4-dev (2:4.40-1) ... Setting up libxcb-dri3-0:amd64 (1.17.0-2+b2) ... Setting up libmuparser-dev:amd64 (2.3.4-2+b1) ... Setting up libx11-xcb1:amd64 (2:1.8.13-1) ... Setting up libice6:amd64 (2:1.1.1-1+b2) ... Setting up libjsoncpp-dev:amd64 (1.9.8-2) ... Setting up libqt6core6t64:amd64 (6.11.2+dfsg-5) ... Setting up libpciaccess0:amd64 (0.19-2) ... Setting up libodbcinst2:amd64 (2.3.14-2) ... Setting up libavif16:amd64 (1.4.2-1) ... Setting up liblapack3:amd64 (3.12.1-8) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gettext (1.0-5) ... Setting up libqt6test6:amd64 (6.11.2+dfsg-5) ... Setting up libarpack2t64:amd64 (3.9.1-6+b2) ... Setting up libxdamage1:amd64 (1:1.1.7-1+b1) ... Setting up libgmp-dev:amd64 (2:6.3.0+dfsg-5+b2) ... Setting up libatk1.0-0t64:amd64 (2.62.0-2) ... Setting up libpdfbox-java (1:1.8.16-5) ... Setting up libxau-dev:amd64 (1:1.0.11-1+b2) ... Setting up libxpm4:amd64 (1:3.5.19-1) ... Setting up libsymspg-dev:amd64 (2.7.0-1+b2) ... Setting up libpcre2-dev:amd64 (10.48-3) ... Setting up libzvbi0t64:amd64 (0.2.45-1) ... Setting up nettle-dev:amd64 (3.10.2-1+b1) ... Setting up libxrender1:amd64 (1:0.9.12-1+b2) ... Setting up libice-dev:amd64 (2:1.1.1-1+b2) ... Setting up dictionaries-common (1.31.4) ... Setting up voro++-dev (0.5+revert-to-0.4.6+dfsg1-1) ... Setting up libtool (2.6.2-3) ... Setting up libpython3.14-stdlib:amd64 (3.14.7-4) ... Setting up libblosc-dev:amd64 (1.21.5+ds-2+b2) ... Setting up libfftw3-bin (3.3.11-1) ... Setting up libwacom9:amd64 (2.20.0-1) ... Setting up openssh-common (1:10.5p1-1) ... Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.13-stable-1) ... Setting up fontconfig-config (2.17.1-5) ... Setting up libgpgmepp7:amd64 (2.2.0-2) ... Setting up libjson-c-dev:amd64 (0.19+ds-1) ... Setting up libgeos-c1t64:amd64 (3.15.0-1) ... Setting up libfyba-dev:amd64 (4.1.1-11+b2) ... Setting up libwebpdemux2:amd64 (1.6.0-0.1) ... Setting up libedit2:amd64 (3.1-20260512-1) ... Setting up libevent-openssl-2.1-7t64:amd64 (2.1.13-stable-1) ... Setting up libgfortran-16-dev:amd64 (16.2.0-3) ... Setting up libpng-dev:amd64 (1.6.58-1) ... Setting up libcommons-parent-java (56-1) ... Setting up libaec-dev:amd64 (1.1.7-1) ... Setting up libavahi-common3:amd64 (0.8-18) ... Setting up libjpeg-dev:amd64 (1:3.1.3-4) ... Setting up libjbig-dev:amd64 (2.1-6.1+b3) ... Setting up libcloudproviders0:amd64 (0.4.1-1) ... Setting up libcommons-logging-java (1.3.0-2) ... Setting up libxext6:amd64 (2:1.3.4-1+b4) ... Setting up libnss3:amd64 (2:3.129-1) ... Setting up libngtcp2-crypto-gnutls-dev:amd64 (1.24.0-1) ... Setting up dbus-daemon (1.16.2-5+b1) ... Setting up libpaper-utils (2.2.5-0.4) ... Setting up libkim-api2:amd64 (2.4.1-3+b2) ... Setting up libngtcp2-dev:amd64 (1.24.0-1) ... Setting up libhdf4-0:amd64 (4.3.1-3) ... Setting up libsvtav1enc-dev:amd64 (4.1.0+dfsg-1) ... Setting up libkim-api-dev (2.4.1-3+b2) ... Setting up libcolord2:amd64 (1.4.8-3) ... Setting up libsuperlu7:amd64 (7.0.1+dfsg1-2+b2) ... Setting up pkgconf:amd64 (2.5.1-4) ... Setting up libpsl-dev:amd64 (0.23.3-1) ... Setting up libxxf86vm1:amd64 (1:1.1.4-2+b1) ... Setting up libinput-bin (1.31.3-1) ... Setting up libtbbbind-2-5:amd64 (2023.1.0-3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up liburiparser-dev (1.0.1+dfsg-1) ... Setting up libnuma-dev:amd64 (2.0.19-1+b2) ... Setting up libnl-route-3-200:amd64 (3.12.0-2+b1) ... Setting up libxnvctrl0:amd64 (535.171.04-1+b3) ... Setting up gcc-16-for-host:amd64 (16.2.0-3) ... Setting up libdconf1:amd64 (51.0-2) ... Setting up dh-autoreconf (23) ... Setting up libminizip-dev:amd64 (1:1.3.dfsg+really1.3.2-3) ... Setting up libltdl-dev:amd64 (2.6.2-3) ... Setting up libthai0:amd64 (0.1.30-3) ... Setting up ca-certificates (20260816) ... Updating certificates in /etc/ssl/certs... 121 added, 0 removed; done. Setting up libvorbisfile3:amd64 (1.3.7-3+b2) ... Setting up libxdmcp-dev:amd64 (1:1.1.5-2+b1) ... Setting up libxml2-dev:amd64 (2.15.4+dfsg-1) ... Setting up libwebp-dev:amd64 (1.6.0-0.1) ... Setting up libjs-jquery-ui (1.14.2+dfsg-1) ... Setting up libptexenc1:amd64 (2026.20260303.78225+ds-5) ... Setting up libqt6xml6:amd64 (6.11.2+dfsg-5) ... Setting up libfreetype6:amd64 (2.14.3+dfsg-2) ... Setting up libtiff-dev:amd64 (4.7.2-1) ... Setting up libqt6sql6:amd64 (6.11.2+dfsg-5) ... Setting up libopenjp2-7-dev:amd64 (2.5.4-1.1) ... Setting up libxfixes3:amd64 (1:6.0.0-2+b5) ... Setting up libadios2-mpi-plugins:amd64 (2.12.1+dfsg1-3) ... Setting up libllvm21:amd64 (1:21.1.8-13) ... Setting up libgeos-dev (3.15.0-1) ... Setting up dbus (1.16.2-5+b1) ... invoke-rc.d: could not determine current runlevel Setting up libdav1d-dev:amd64 (1.5.4-1) ... Setting up sphinx-common (9.1.0-8) ... Setting up libxinerama1:amd64 (2:1.1.4-3+b5) ... Setting up opencl-clhpp-headers (3.0~2025.07.22-1) ... Setting up libxkbcommon-x11-0:amd64 (1.13.1-1) ... Setting up liblapack-dev:amd64 (3.12.1-8) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libeigen3-dev (5.0.1-3) ... Setting up libgssapi-krb5-2:amd64 (1.22.1-3) ... Setting up libxrandr2:amd64 (2:1.5.4-1+b4) ... Setting up liblz4-dev:amd64 (1.10.0-10) ... Setting up libjxl-dev:amd64 (0.11.2-5.1) ... Setting up ucf (3.0056) ... Setting up libspdlog1.15:amd64 (1:1.15.3+ds-1+b2) ... Setting up libssh2-1-dev:amd64 (1.11.1-6) ... Setting up gfortran-16-x86-64-linux-gnu (16.2.0-3) ... Setting up libngtcp2-crypto-ossl0:amd64 (1.24.0-1) ... Setting up libhdf4-dev (4.3.1-3) ... Setting up ocl-icd-opencl-dev:amd64 (2.3.4-1+b1) ... Setting up libgpgme-dev (2.2.0-2) ... Setting up libgvc7:amd64 (14.1.2-1+b4) ... Setting up libssh-4:amd64 (0.12.2-1) ... Setting up libevent-extra-2.1-7t64:amd64 (2.1.13-stable-1) ... Setting up qtpaths6-bin (6.11.2+dfsg-5) ... Setting up libmariadb-dev:amd64 (1:11.8.9+ds-4) ... Setting up qmake6-bin (6.11.2+dfsg-5) ... Setting up dh-strip-nondeterminism (1.15.1-1) ... Setting up libdrm2:amd64 (2.4.134-3) ... Setting up librttopo1:amd64 (1.1.0-4+b2) ... Setting up libyuv-dev:amd64 (0.0.1971.20260904-2) ... Setting up libnl-3-dev:amd64 (3.12.0-2+b1) ... Setting up libfreexl1:amd64 (2.0.0-1+b4) ... Setting up libnss3-dev:amd64 (2:3.129-1) ... Setting up libva-drm2:amd64 (2.24.1-2) ... Setting up groff-base (1.24.1-1) ... Setting up gfortran-16 (16.2.0-3) ... Setting up libvdpau1:amd64 (1.5-4+b1) ... Setting up libwayland-cursor0:amd64 (1.26.0-1) ... Setting up libarchive-dev:amd64 (3.8.9-1) ... Setting up libllvm22:amd64 (1:22.1.8-1+b2) ... Setting up libamd-comgr3:amd64 (7.0.2+dfsg-3) ... Setting up xml-core (0.21) ... Setting up hunspell-en-us (1:2020.12.07-4) ... Setting up libpam-systemd:amd64 (262-1) ... Setting up libpython3.14:amd64 (3.14.7-4) ... Setting up libharfbuzz0b:amd64 (12.3.2-2+b2) ... Setting up libpython3.14-dev:amd64 (3.14.7-4) ... Setting up libhwloc-dev:amd64 (2.15.0-2) ... Setting up libxss1:amd64 (1:1.2.3-1+b4) ... Setting up libfontconfig1:amd64 (2.17.1-5) ... Setting up libhdf5-320:amd64 (2.2.0+repack-5) ... Setting up python3.14 (3.14.7-4) ... Setting up ca-certificates-java (20260311) ... No JRE found. Skipping Java certificates setup. Setting up libclang1-21 (1:21.1.8-13) ... Setting up qtpaths6:amd64 (6.11.2+dfsg-5) ... Setting up libarmadillo15 (1:15.2.1+dfsg-2) ... Setting up libsuperlu-dev:amd64 (7.0.1+dfsg1-2+b2) ... Setting up libva-x11-2:amd64 (2.24.1-2) ... Setting up libgpgmepp-dev:amd64 (2.2.0-2) ... Setting up libsm6:amd64 (2:1.2.6-1+b2) ... Setting up libfftw3-dev:amd64 (3.3.11-1) ... Setting up unixodbc-dev:amd64 (2.3.14-2) ... Setting up libopenmpt0t64:amd64 (0.8.9-1) ... Setting up libavahi-client3:amd64 (0.8-18) ... Setting up libpython3-stdlib:amd64 (3.14.7-3) ... Setting up libqt6dbus6:amd64 (6.11.2+dfsg-5) ... Setting up libxres1:amd64 (2:1.2.1-2) ... Setting up libdrm-amdgpu1:amd64 (2.4.134-3) ... Setting up libqt6concurrent6:amd64 (6.11.2+dfsg-5) ... Setting up libgnutls28-dev:amd64 (3.8.13-1) ... Setting up libmariadb-dev-compat:amd64 (1:11.8.9+ds-4) ... Setting up libcurl4-gnutls:amd64 (8.23.0~rc1-2) ... Setting up libinput10:amd64 (1.31.3-1) ... Setting up librttopo-dev:amd64 (1.1.0-4+b2) ... Setting up libnghttp2-dev:amd64 (1.70.0-1) ... Setting up libibverbs1:amd64 (65.0-1) ... Creating group 'rdma' with GID 993. Setting up fontconfig (2.17.1-5) ... Regenerating fonts cache... done. Setting up libxft2:amd64 (2.3.6-1+b5) ... Setting up libproxy1v5:amd64 (0.5.12-3) ... Setting up libarpack2-dev:amd64 (3.9.1-6+b2) ... Setting up libpython3-dev:amd64 (3.14.7-3) ... Setting up libhdf5-cpp-320:amd64 (2.2.0+repack-5) ... Setting up libxcb1-dev:amd64 (1.17.0-2+b2) ... Setting up libavutil61:amd64 (7:9.0.2-1) ... Setting up libzmq5:amd64 (4.3.5-1+b7) ... Setting up gfortran-16-for-host:amd64 (16.2.0-3) ... Setting up libxi6:amd64 (2:1.8.3-1) ... Setting up libcurl4t64:amd64 (8.23.0~rc1-2) ... Setting up python3.14-dev (3.14.7-4) ... Setting up ibverbs-providers:amd64 (65.0-1) ... Setting up libenchant-2-2:amd64 (2.8.16+dfsg-4) ... Setting up python3-pip-whl (26.1.2+dfsg-1) ... Setting up libpoppler162:amd64 (26.07.0-2) ... Setting up libsm-dev:amd64 (2:1.2.6-1+b2) ... Setting up openssh-client (1:10.5p1-1) ... Created symlink '/etc/systemd/user/sockets.target.wants/ssh-agent.socket' → '/usr/lib/systemd/user/ssh-agent.socket'. Setting up libfreexl-dev:amd64 (2.0.0-1+b4) ... Setting up libxtst6:amd64 (2:1.2.5-1+b2) ... Setting up po-debconf (1.0.22) ... Setting up libxcursor1:amd64 (1:1.2.3-1+b2) ... Setting up openjdk-25-jre-headless:amd64 (25.0.5~7ea-1) ... update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up libpango-1.0-0:amd64 (1.58.0-1) ... Setting up libdrm-intel1:amd64 (2.4.134-3) ... Setting up libpq5:amd64 (18.6-3+b1) ... Setting up libx11-dev:amd64 (2:1.8.13-1) ... Setting up libcurl3t64-gnutls:amd64 (8.23.0~rc1-2) ... Setting up gcc-for-host:amd64 (4:16.1.0-3) ... Setting up libpq-dev (18.6-3+b1) ... Setting up python3 (3.14.7-3) ... Setting up libtbb12:amd64 (2023.1.0-3) ... Setting up python3-zipp (3.23.0-2) ... Setting up libxerces-c3.2t64:amd64 (3.2.4+debian-1.3+b4) ... Setting up xfonts-utils (1:7.7+7) ... Setting up python3-autocommand (2.2.2-4) ... Setting up libhwloc-plugins:amd64 (2.15.0-2) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink '/etc/systemd/system/timers.target.wants/man-db.timer' → '/usr/lib/systemd/system/man-db.timer'. Setting up python3-markupsafe (3.0.3-2+b1) ... Setting up gfortran-x86-64-linux-gnu (4:16.1.0-3) ... Setting up libcairo2:amd64 (1.18.4-3+b1) ... Setting up gfortran-for-host:amd64 (4:16.1.0-3) ... Setting up qmake6:amd64 (6.11.2+dfsg-5) ... Setting up python3.14-venv (3.14.7-4) ... Setting up libfreetype-dev:amd64 (2.14.3+dfsg-2) ... Setting up libxfixes-dev:amd64 (1:6.0.0-2+b5) ... Setting up libtheoradec2:amd64 (1.2.0+dfsg-6+b2) ... Setting up tex-common (6.20) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libnl-route-3-dev:amd64 (3.12.0-2+b1) ... Setting up dbus-user-session (1.16.2-5+b1) ... Setting up python3-decorator (5.3.1-1) ... Setting up python3-jinja2 (3.1.6-4) ... Setting up python3-pygments (2.20.0+dfsg-2) ... Setting up python3-packaging (26.2-3) ... Setting up libclang-cpp21 (1:21.1.8-13) ... Setting up python3-chardet (5.2.0+dfsg-2) ... Setting up libcfitsio10t64:amd64 (4.7.0-2) ... Setting up python3-venv (3.14.7-3) ... Setting up python3-wcwidth (0.8.3+dfsg1-1) ... Setting up python3-pyproject-hooks (1.2.0-2) ... Setting up python3-enchant (3.3.0-1) ... Setting up python3-certifi (2026.7.22+ds-1) ... Setting up python3-typeshed (0.0~git20260204.516eed0-2) ... Setting up python3-snowballstemmer (3.1.1-1) ... Setting up libxerces-c-dev:amd64 (3.2.4+debian-1.3+b4) ... Setting up libpython3-all-dev:amd64 (3.14.7-3) ... Setting up libgssrpc4t64:amd64 (1.22.1-3) ... Setting up libatspi2.0-0t64:amd64 (2.62.0-2) ... Setting up python3-dev (3.14.7-3) ... Setting up libxt6t64:amd64 (1:1.2.1-1.3+b2) ... Setting up librtmp-dev:amd64 (2.6-1) ... Setting up libavif-dev:amd64 (1.4.2-1) ... Setting up libevent-dev (2.1.13-stable-1) ... Setting up libswresample7:amd64 (7:9.0.2-1) ... Setting up python3-idna (3.19-1) ... Setting up python3-typing-extensions (4.16.0-5) ... Setting up libpmix2t64:amd64 (7.0.0~git.20260918-1) ... Setting up git (1:2.55.0-1) ... Setting up libhdf5-hl-320:amd64 (2.2.0+repack-5) ... Setting up python3-installer (1.0.1+dfsg1-3) ... Setting up python3-urllib3 (2.8.0-1) ... Setting up libxext-dev:amd64 (2:1.3.4-1+b4) ... Setting up libtheora1:amd64 (1.2.0+dfsg-6+b2) ... Setting up python3-astroid (4.3.1-3) ... Setting up libbluray4:amd64 (1:1.5.0-3) ... Setting up libhsa-runtime64-1:amd64 (6.4.3+dfsg-5) ... Setting up libqt6network6:amd64 (6.11.2+dfsg-5) ... Setting up python3-traitlets (5.16.1-1) ... Setting up libhdf5-fortran-320:amd64 (2.2.0+repack-5) ... Setting up libharfbuzz-subset0:amd64 (12.3.2-2+b2) ... Setting up cmake (4.3.4-1) ... Setting up librdmacm1t64:amd64 (65.0-1) ... Setting up python3-roman-numerals (4.1.0-1) ... Setting up libcairo-gobject2:amd64 (1.18.4-3+b1) ... Setting up libtbb-dev:amd64 (2023.1.0-3) ... Setting up libpangoft2-1.0-0:amd64 (1.58.0-1) ... Setting up libswscale10:amd64 (7:9.0.2-1) ... Setting up libxrender-dev:amd64 (1:0.9.12-1+b2) ... Setting up libfltk1.3t64:amd64 (1.3.11-3+b1) ... Setting up libcups2t64:amd64 (2.4.18-1) ... Setting up tex-gyre (20180621-8) ... Setting up libpangocairo-1.0-0:amd64 (1.58.0-1) ... Setting up libkadm5clnt-mit12:amd64 (1.22.1-3) ... Setting up python3-imagesize (2.0.1-1) ... Setting up python3-ptyprocess (0.7.0-7) ... Setting up python3-prompt-toolkit (3.0.53-2) ... Setting up dh-python (7.20260623) ... Setting up libavutil-dev:amd64 (7:9.0.2-1) ... Setting up libatk-bridge2.0-0t64:amd64 (2.62.0-2) ... Setting up python3-more-itertools (11.1.0-3) ... Setting up libfabric1:amd64 (2.1.0-1.1+b2) ... Setting up libfltk-images1.3t64:amd64 (1.3.11-3+b1) ... Setting up mesa-libgallium:amd64 (26.2.3-2) ... Setting up python3-pure-eval (0.2.3-2) ... Setting up libxmu6:amd64 (2:1.1.3-4+b1) ... Setting up libvulkan-dev:amd64 (1.4.357.0-1) ... Setting up libcfitsio-dev:amd64 (4.7.0-2) ... Setting up libprrte4:amd64 (5.0.0~git.20260918.1-2) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-ipython-pygments-lexers (1.1.1-3) ... Setting up qt6-base-dev-tools (6.11.2+dfsg-5) ... Setting up python3-jaraco.context (6.0.1-2) ... Setting up libproj25:amd64 (9.8.1-1) ... Setting up libkdb5-10t64:amd64 (1.22.1-3) ... Setting up python3-parso (0.8.7-1) ... Setting up libgbm1:amd64 (26.2.3-2) ... Setting up python3-babel (2.18.0+git2026-08-12-2) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up libswresample-dev:amd64 (7:9.0.2-1) ... Setting up libfontconfig-dev:amd64 (2.17.1-5) ... Setting up python3-defusedxml (0.7.1-3) ... Setting up python3-asttokens (3.0.1-3) ... Setting up python3-charset-normalizer (3.4.7-2+b1) ... Setting up libxcursor-dev:amd64 (1:1.2.3-1+b2) ... Setting up python3-alabaster (1.0.0-2) ... Setting up preview-latex-style (13.2-1.1) ... Setting up libgl1-mesa-dri:amd64 (26.2.3-2) ... Setting up libgvplugin-pango8:amd64 (14.1.2-1+b4) ... Setting up libnetcdf22:amd64 (1:4.10.1-1+b1) ... Setting up python3-all (3.14.7-3) ... Setting up debhelper (14.5) ... Setting up dconf-service (51.0-2) ... Setting up libxaw7:amd64 (2:1.0.16-1+b2) ... Setting up libibverbs-dev:amd64 (65.0-1) ... Setting up libxss-dev:amd64 (1:1.2.3-1+b4) ... Setting up python3-wheel (0.47.0-1) ... Setting up libhdf5-hl-fortran-320:amd64 (2.2.0+repack-5) ... Setting up libgeotiff5:amd64 (1.7.4-2) ... Setting up python3-matplotlib-inline (0.2.1-1) ... Setting up libegl-mesa0:amd64 (26.2.3-2) ... Setting up doxygen (1.15.0+ds1-1.1) ... Setting up libtheora-dev:amd64 (1.2.0+dfsg-6+b2) ... Setting up python3-executing (2.2.1-0.1) ... Setting up libxt-dev:amd64 (1:1.2.1-1.3+b2) ... Setting up python3-pexpect (4.9-5) ... Setting up libswscale-dev:amd64 (7:9.0.2-1) ... Setting up libamdhip64-6:amd64 (6.4.3-5) ... Setting up python3-requests (2.34.2-1) ... Setting up libhdf5-hl-cpp-320:amd64 (2.2.0+repack-5) ... Setting up texlive-binaries (2026.20260303.78225+ds-5) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up libkadm5srv-mit12:amd64 (1.22.1-3) ... Setting up libegl1:amd64 (1.7.0-3+b1) ... Setting up htmldoc (1.9.24-1) ... Setting up python3-build (1.5.1-1) ... Setting up texlive-base (2026.20260911-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex Setting up python3-stack-data (0.6.3-4) ... Setting up libxft-dev:amd64 (2.3.6-1+b5) ... Setting up libspatialite8t64:amd64 (5.1.0-4) ... Setting up krb5-multidev:amd64 (1.22.1-3) ... Setting up python3-all-dev (3.14.7-3) ... Setting up libprrte-dev:amd64 (5.0.0~git.20260918.1-2) ... Setting up libprrte-bin (5.0.0~git.20260918.1-2) ... Setting up libucx0:amd64 (1.22.0-1) ... Setting up libglx-mesa0:amd64 (26.2.3-2) ... Setting up python3-setuptools (84.0.0-2) ... Setting up libglx0:amd64 (1.7.0-3+b1) ... Setting up dconf-gsettings-backend:amd64 (51.0-2) ... Setting up python3-jedi (0.20.0+ds1-1) ... Setting up pybuild-plugin-pyproject (7.20260623) ... Setting up libkrb5-dev:amd64 (1.22.1-3) ... Setting up libgl1:amd64 (1.7.0-3+b1) ... Setting up libqt6gui6:amd64 (6.11.2+dfsg-5) ... Setting up texlive-latex-base (2026.20260911-1) ... Setting up python3-ipython (9.11.0-3) ... Setting up texlive-latex-recommended (2026.20260911-1) ... Setting up libglew2.3:amd64 (2.3.1+dfsg2-5) ... Setting up libucc1:amd64 (1.9.0-1) ... Setting up texlive-pictures (2026.20260911-1) ... Setting up texlive-fonts-recommended (2026.20260911-1) ... Setting up libglx-dev:amd64 (1.7.0-3+b1) ... Setting up libgl-dev:amd64 (1.7.0-3+b1) ... Setting up libgtk-3-common (3.24.52-1) ... Setting up libopenmpi40:amd64 (5.0.11-2) ... Setting up qt6-qpa-plugins:amd64 (6.11.2+dfsg-5) ... Setting up libglew-common-dev:amd64 (2.3.1+dfsg2-5) ... Setting up libqt6opengl6:amd64 (6.11.2+dfsg-5) ... Setting up latexmk (1:4.88~ds-1) ... Setting up texlive-latex-extra (2026.20260911-1) ... Setting up libcurl4-gnutls-dev:amd64 (8.23.0~rc1-2) ... Setting up libgl2ps1.4:amd64 (1.4.2+dfsg1-4+b1) ... Setting up libqt6widgets6:amd64 (6.11.2+dfsg-5) ... Setting up libqt6waylandclient6:amd64 (6.11.2+dfsg-5) ... Setting up libpnetcdf8:amd64 (1.15.0-3) ... Setting up libhdf5-dev (2.2.0+repack-5) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5_serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/cmake/hdf5_serial to provide /usr/lib/x86_64-linux-gnu/cmake/hdf5 (hdf5.cmake) in auto mode Setting up libproj-dev:amd64 (9.8.1-1) ... Setting up libglu1-mesa-dev:amd64 (9.0.2-1.1+b4) ... Setting up libnetcdf-dev (1:4.10.1-1+b1) ... Setting up libspatialite-dev (5.1.0-4) ... Setting up libpnetcdf-dev:amd64 (1.15.0-3) ... Setting up libqt6openglwidgets6:amd64 (6.11.2+dfsg-5) ... Setting up libqt6wlshellintegration6:amd64 (6.11.2+dfsg-5) ... Setting up openmpi-bin (5.0.11-2) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libpoppler-dev:amd64 (26.07.0-2) ... Setting up libhdf5-openmpi-320:amd64 (2.2.0+repack-5) ... Setting up libqt6printsupport6:amd64 (6.11.2+dfsg-5) ... Setting up libhdf5-openmpi-cpp-320:amd64 (2.2.0+repack-5) ... Setting up libgeotiff-dev:amd64 (1.7.4-2) ... Setting up libpoppler-private-dev:amd64 (26.07.0-2) ... Setting up mpi-default-bin (1.20) ... Setting up python3-mpi4py (4.1.2-1+b1) ... Setting up libgl2ps-dev:amd64 (1.4.2+dfsg1-4+b1) ... Setting up qt6-base-dev:amd64 (6.11.2+dfsg-5) ... Setting up libhdf5-openmpi-hl-320:amd64 (2.2.0+repack-5) ... Setting up libarmadillo-dev (1:15.2.1+dfsg-2) ... Setting up libglew-dev:amd64 (2.3.1+dfsg2-5) ... Setting up libhdf5-openmpi-hl-cpp-320:amd64 (2.2.0+repack-5) ... Setting up libhdf5-openmpi-fortran-320:amd64 (2.2.0+repack-5) ... Setting up libopenmpi-dev (5.0.11-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up libhdf5-openmpi-hl-fortran-320:amd64 (2.2.0+repack-5) ... Setting up mpi-default-dev (1.20) ... Setting up libhdf5-openmpi-dev (2.2.0+repack-5) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5_openmpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/cmake/hdf5_openmpi to provide /usr/lib/x86_64-linux-gnu/cmake/hdf5 (hdf5.cmake) in auto mode Setting up libhdf5-mpi-dev (2.2.0+repack-5) ... Setting up libadios2-mpi-auxiliary-2.12:amd64 (2.12.1+dfsg1-3) ... Setting up libheif-plugin-dav1d:amd64 (1.23.4-1+b1) ... Setting up libheif-plugin-libde265:amd64 (1.23.4-1+b1) ... Setting up libadios2-mpi-core-2.12:amd64 (2.12.1+dfsg1-3) ... Setting up libheif1:amd64 (1.23.4-1+b1) ... Setting up libheif-dev:amd64 (1.23.4-1+b1) ... Setting up libgd3:amd64 (2.3.3-14) ... Setting up libadios2-mpi-c-2.12:amd64 (2.12.1+dfsg1-3) ... Setting up libadios2-mpi-c++-2.12:amd64 (2.12.1+dfsg1-3) ... Setting up glycin-loaders (2.2.1+ds-2) ... Setting up libglycin-2-0:amd64 (2.2.1+ds-2) ... Setting up libgdal39:amd64 (3.13.3+dfsg-1+b1) ... Setting up libgvplugin-gd8:amd64 (14.1.2-1+b4) ... Setting up glycin-thumbnailers (2.2.1+ds-2) ... Setting up libgdal-dev (3.13.3+dfsg-1+b1) ... Setting up libgdk-pixbuf-2.0-0:amd64 (2.44.8+dfsg-1) ... Setting up graphviz (14.1.2-1+b4) ... Setting up gtk-update-icon-cache (4.24.0+ds-2) ... Setting up librsvg2-2:amd64 (2.62.1+dfsg-1) ... Setting up libavcodec63:amd64 (7:9.0.2-1) ... Setting up adwaita-icon-theme (51.0-1) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libgtk-3-0t64:amd64 (3.24.52-1) ... Setting up libavcodec-dev:amd64 (7:9.0.2-1) ... Setting up libavformat63:amd64 (7:9.0.2-1) ... Setting up libavformat-dev:amd64 (7:9.0.2-1) ... Setting up libvtk9.6:amd64 (9.6.2+dfsg1-6+b1) ... Setting up vtk9 (9.6.2+dfsg1-6+b1) ... Setting up libvtk9.6-qt:amd64 (9.6.2+dfsg1-6+b1) ... Setting up python3-vtk9 (9.6.2+dfsg1-6+b1) ... /usr/lib/python3/dist-packages/vtkmodules/web/testing.py:687: SyntaxWarning: "\." is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\."? A raw string is also an option. fnamePattern = re.compile("([^\.\/\\\]+)\.py") Setting up libvtk9-java (9.6.2+dfsg1-6+b1) ... Processing triggers for libc-bin (2.43-6) ... Processing triggers for systemd (262-1) ... Processing triggers for ca-certificates-java (20260311) ... Adding debian:ACCVRAIZ1.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:BJCA_Global_Root_CA1.pem Adding debian:BJCA_Global_Root_CA2.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:Certainly_Root_E1.pem Adding debian:Certainly_Root_R1.pem Adding debian:Certigna_Root_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:D-TRUST_BR_Root_CA_1_2020.pem Adding debian:D-TRUST_BR_Root_CA_2_2023.pem Adding debian:D-TRUST_EV_Root_CA_1_2020.pem Adding debian:D-TRUST_EV_Root_CA_2_2023.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GTS_Root_R1.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:HiPKI_Root_CA_-_G1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:ISRG_Root_X1.pem Adding debian:ISRG_Root_X2.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:Izenpe.com.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:OISTE_Server_Root_ECC_G1.pem Adding debian:OISTE_Server_Root_RSA_G1.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:SECOM_TLS_ECC_Root_CA_2024.pem Adding debian:SECOM_TLS_RSA_Root_CA_2024.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem Adding debian:SecureSign_Root_CA14.pem Adding debian:SecureSign_Root_CA15.pem Adding debian:Security_Communication_ECC_RootCA1.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:SwissSign_RSA_TLS_Root_CA_2022_-_1.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:TWCA_CYBER_Root_CA.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:Telekom_Security_TLS_ECC_Root_2020.pem Adding debian:Telekom_Security_TLS_RSA_Root_2023.pem Adding debian:Telia_EC_TLS_Root_CA_v3.pem Adding debian:Telia_RSA_TLS_Root_CA_v3.pem Adding debian:Telia_Root_CA_v2.pem Adding debian:TrustAsia_Global_Root_CA_G3.pem Adding debian:TrustAsia_Global_Root_CA_G4.pem Adding debian:TrustAsia_TLS_ECC_Root_CA.pem Adding debian:TrustAsia_TLS_RSA_Root_CA.pem Adding debian:TunTrust_Root_CA.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:e-Szigno_TLS_Root_CA_2023.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:vTrus_ECC_Root_CA.pem Adding debian:vTrus_Root_CA.pem done. Setting up openjdk-25-jdk-headless:amd64 (25.0.5~7ea-1) ... update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jnativescan to provide /usr/bin/jnativescan (jnativescan) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode Setting up openjdk-25-jre:amd64 (25.0.5~7ea-1) ... Setting up default-jre-headless (2:1.25-77) ... Setting up default-jre (2:1.25-77) ... Setting up default-jdk-headless (2:1.25-77) ... Setting up openjdk-25-jdk:amd64 (25.0.5~7ea-1) ... update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode Setting up default-jdk (2:1.25-77) ... Setting up libvtk9-dev (9.6.2+dfsg1-6+b1) ... Setting up libvtk9-qt-dev (9.6.2+dfsg1-6+b1) ... Processing triggers for sgml-base (1.31+nmu1) ... Setting up docutils-common (0.23+dfsg-2) ... Processing triggers for sgml-base (1.31+nmu1) ... Setting up python3-docutils (0.23+dfsg-2) ... Setting up python3-sphinx (9.1.0-8) ... Setting up python3-sphinxcontrib.spelling (8.0.2-1) ... Setting up python3-sphinx-design (0.7.0-5) ... Setting up python3-breathe (4.36.0-2) ... Setting up python3-sphinxcontrib.jquery (4.1-7) ... Setting up python3-sphinx-tabs (3.4.7-3) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for dictionaries-common (1.31.4) ... Processing triggers for ca-certificates (20260816) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for tex-common (6.20) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. Processing triggers for ca-certificates-java (20260311) ... done. +------------------------------------------------------------------------------+ | Check architectures Sat, 26 Sep 2026 04:04:54 +0000 | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Build environment Sat, 26 Sep 2026 04:04:54 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 7.0.10+deb14-amd64 #1 SMP PREEMPT_DYNAMIC Debian 7.0.10-1 (2026-05-27) amd64 (x86_64) Toolchain package versions: binutils_2.47-6 dpkg-dev_1.23.11 g++-15_15.3.0-4 g++-16_16.2.0-3 gcc-15_15.3.0-4 gcc-16_16.2.0-3 libc6-dev_2.43-6 libstdc++-15-dev_15.3.0-4 libstdc++-16-dev_16.2.0-3 libstdc++6_16.2.0-3 linux-libc-dev_7.2.7-1 Package versions: adwaita-icon-theme_51.0-1 apt_3.3.3 at-spi2-common_2.62.0-2 autoconf_2.73-2 automake_1:1.19-2 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texlive-latex-base_2026.20260911-1 texlive-latex-extra_2026.20260911-1 texlive-latex-recommended_2026.20260911-1 texlive-pictures_2026.20260911-1 tzdata_2026c-1 ucf_3.0056 unixodbc-common_2.3.14-2 unixodbc-dev_2.3.14-2 util-linux_2.42.4-1 uuid-dev_2.42.4-1 voro++-dev_0.5+revert-to-0.4.6+dfsg1-1 vtk9_9.6.2+dfsg1-6+b1 x11-common_1:7.7+26 x11proto-dev_2025.1-1 xdg-utils_1.2.1-2 xfonts-encodings_1:1.0.4-2.2 xfonts-utils_1:7.7+7 xkb-data_2.48-1 xml-core_0.21 xorg-sgml-doctools_1:1.12.1-1 xtrans-dev_1.6.0-1 xz-utils_5.8.4-1 zlib1g_1:1.3.dfsg+really1.3.2-3 zlib1g-dev_1:1.3.dfsg+really1.3.2-3 +------------------------------------------------------------------------------+ | Build Sat, 26 Sep 2026 04:04:54 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: lammps Binary: lammps, liblammps-dev, liblammps0t64, python3-lammps, lammps-doc, lammps-data, lammps-examples Architecture: any all Version: 20260704+dfsg-2 Maintainer: Debian Science Maintainers Uploaders: Anton Gladky Homepage: https://lammps.sandia.gov/ Standards-Version: 4.7.4 Vcs-Browser: https://salsa.debian.org/science-team/lammps Vcs-Git: https://salsa.debian.org/science-team/lammps.git Testsuite: autopkgtest Testsuite-Triggers: python3 Build-Depends: dpkg-dev (>= 1.22.5), cmake, debhelper-compat (= 14), dh-python, pybuild-plugin-pyproject, python3-setuptools, gfortran-for-host | fortran-compiler, libavcodec-dev, libeigen3-dev, libfftw3-dev, libhdf5-mpi-dev, libjpeg-dev, libkim-api-dev, libnetcdf-dev, libpnetcdf-dev [amd64 arm64 mips64el ppc64el riscv64 s390x ia64 ppc64 sparc64], libsymspg-dev, libvtk9-dev, libvtk9-qt-dev, mpi-default-bin, mpi-default-dev, ocl-icd-opencl-dev | opencl-dev, python3-all-dev:native, libpython3-all-dev, python3-ipython, voro++-dev Build-Depends-Indep: dh-sequence-sphinxdoc, libjs-sphinxdoc, libjs-jquery, libjs-mathjax, libjs-underscore, texlive-latex-recommended, texlive-fonts-recommended, texlive-latex-extra, tex-gyre, doxygen, sphinx-rtd-theme-common, latexmk, htmldoc, python3-sphinx, python3-sphinx-tabs, python3-sphinxcontrib.jquery, python3-sphinxcontrib.spelling, python3-breathe, python3-sphinx-design, python3-venv, git Package-List: lammps deb science optional arch=any lammps-data deb doc optional arch=all lammps-doc deb doc optional arch=all lammps-examples deb doc optional arch=all liblammps-dev deb science optional arch=any liblammps0t64 deb science optional arch=any python3-lammps deb python optional arch=any Checksums-Sha1: 78e61fe03d63d6f2db3c0cf8065f6f1a8bd6add9 213748522 lammps_20260704+dfsg.orig.tar.gz a86acff3b25f1db57bb57dbce61799d8c59e7453 22168 lammps_20260704+dfsg-2.debian.tar.xz Checksums-Sha256: cddbc45a047416bd48a4a0b87f24a5b61b3446982b74d18cafe619c22b17eb62 213748522 lammps_20260704+dfsg.orig.tar.gz 84a2f53c35bf7ca9d50811b1804f474c149c2cd75a5ca524a48a1b8c100527cd 22168 lammps_20260704+dfsg-2.debian.tar.xz Files: b635f5a814b3f8db20d39bf4494b79a2 213748522 lammps_20260704+dfsg.orig.tar.gz b084ddfc47b22004373c3971c002f3cf 22168 lammps_20260704+dfsg-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEE+JIdOnQEyG4RNSIVxxl2mbKbIyoFAmq24ZIACgkQxxl2mbKb IyorgBAAwaFHkfhZ8bV8hYgILlA8UOATe3zAsbQv1szu+k0yr1EXYZP68QVOkJbC nQay7mheEybNym7auioTQ5WgeHYGyLvwn2/rvCCgh6GDR7kgpcO92fuHkpsP3Yk4 cJz5W7g2aXU84sbtOUuN/sVW3R8b0yn8muP2ov/FXQi2zWBBFsnybZi2EeKTot4J xGzfD4wN5cCX5D0A8wnpQHe0YZiEJJmpXD19ANfpQ+2sp9AZ00cR9NBToUnvNK72 jcQTMV6uUGTvODGhgWj7N/UXJMBcz/KGCjvizJRXXermL0KOb5kTsc3jBW7iPyW9 H+bf8qh2kJB7uFtIAIDA6csFA4PQi1lz83AG0h5bBiG5dyEELu80kEF/oxdh+uGu LhJgq5EqQ3d/YGIqGm5RGnl/VMHbk/VEwZ4qwggfPUlcrmc3+Arw3+xAtNYyRUaN /s/+GCQX9p0yCOUFo/u+FszX3YflpOhlEV3L4FFY/GDVXhUzc8np+zamnehsjYYs i46g26+yTorF885jYBtKRZqtlSEbnopmV6ZroXTds+FNgP4bXgFld6zF2S4WL6yF OuIvEyWXwbOsnsaCPLd/eOrZrFSfksfDcuh3Bcf7DwqhgutC0NqyWzlz2NhSO0/n OEvCFf4J4P0dh2fX1i0aiFqCzue79HvbGN1b6v/gbxoavUkqaBc= =G4sA -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./lammps_20260704+dfsg-2.dsc: missing OpenPGP keyrings dpkg-source: info: verifying ./lammps_20260704+dfsg-2.dsc dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-keyring.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-tag2upload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-nonupload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting lammps in /build/lammps-rlhK5n/lammps-20260704+dfsg dpkg-source: info: unpacking lammps_20260704+dfsg.orig.tar.gz dpkg-source: info: unpacking lammps_20260704+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 20_set_potentials_path.patch dpkg-source: info: applying 30_build_docs.patch dpkg-source: info: applying do-not-install-potentials.patch dpkg-source: info: applying fix-eval-py-shebang.patch clean up apt cache ------------------ Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Time Build Commands Sat, 26 Sep 2026 04:05:00 +0000 | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/starting-build-commands/no-network lammps_20260704+dfsg-2 perl-5.44-throwaway amd64 ----------------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/starting-build-commands/no-network lammps_20260704+dfsg-2 perl-5.44-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANGUAGE=en_GB:en LC_ALL=C.UTF-8 LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so LOGNAME=debomatic PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/build/lammps-rlhK5n/lammps-20260704+dfsg SCHROOT_ALIAS_NAME=perl-5.44-throwaway-amd64-debomatic SCHROOT_CHROOT_NAME=perl-5.44-amd64-debomatic SCHROOT_COMMAND=env SCHROOT_GID=110 SCHROOT_GROUP=sbuild SCHROOT_SESSION_ID=perl-5.44-amd64-debomatic-282485c5-7e3f-4a85-a44f-7054f41e2be3 SCHROOT_UID=1002 SCHROOT_USER=debomatic SHELL=/bin/sh USER=debomatic dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -Zxz dpkg-buildpackage: info: source package lammps dpkg-buildpackage: info: source version 20260704+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Maximiliano Curia dpkg-source -Zxz --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3 --sourcedirectory=cmake --builddirectory=/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build dh_auto_clean -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build debian/rules execute_after_dh_auto_clean make[1]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' rm -rf /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build rm -rf .pybuild rm -rf python/build rm -rf python/lammps.egg-info rm -f python/examples/log.lammps if [ -d doc/html.orig ]; then \ rm -rf doc/html; \ mv doc/html.orig doc/html; \ fi rm -rf doc/docenv doc/doctrees doc/utils/sphinx-config/conf.py rm -rf doc/doxygen/xml doc/doxygen-warn.log doc/doxygen/Doxyfile rm -f doc/src/angles.rst doc/src/bonds.rst doc/src/computes.rst \ doc/src/dihedrals.rst doc/src/fixes.rst doc/src/impropers.rst \ doc/src/pairs.rst rm -f doc/utils/sphinx-config/_themes/lammps_theme/search.html rm -rf doc/html make[1]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' dh_autoreconf_clean -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dh_clean -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dpkg-source -Zxz -b . dpkg-source: info: using source format '3.0 (quilt)' dpkg-source: info: building lammps using existing ../lammps_20260704+dfsg.orig.tar.gz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: building lammps in ../lammps_20260704+dfsg-2.debian.tar.xz dpkg-source: info: building lammps in ../lammps_20260704+dfsg-2.dsc debian/rules binary dh binary --with python3 --sourcedirectory=cmake --builddirectory=/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build dh_update_autotools_config -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dh_autoreconf -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build debian/rules override_dh_auto_configure make[1]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' dh_auto_configure -- \ -DBUILD_SHARED_LIBS=ON \ -DCMAKE_SKIP_INSTALL_RPATH=TRUE \ -DPKG_ASPHERE=ON \ -DPKG_ATC=ON \ -DPKG_AWPMD=ON \ -DPKG_BOCS=ON \ -DPKG_BODY=ON \ -DPKG_CG-DNA=ON \ -DPKG_CG-SPICA=ON \ -DPKG_CLASS2=ON \ -DPKG_COLLOID=ON \ -DPKG_COMPRESS=ON \ -DPKG_CORESHELL=ON \ -DPKG_EXTRA-COMPUTE=ON \ -DPKG_EXTRA-PAIR=ON \ -DPKG_DIELECTRIC=ON \ -DPKG_DIFFRACTION=ON \ -DPKG_DIPOLE=ON \ -DPKG_DPD-BASIC=ON \ -DPKG_DRUDE=ON \ -DPKG_EFF=ON \ -DPKG_ELECTRODE=ON \ -DUSE_INTERNAL_LINALG=no \ -DPKG_FEP=ON \ -DPKG_GPU=OFF \ -DPKG_GRANULAR=ON \ -DPKG_H5MD=ON \ -DPKG_KIM=ON \ -DPKG_KSPACE=ON \ -DPKG_LATBOLTZ=ON \ -DPKG_MANIFOLD=ON \ -DPKG_MANYBODY=ON \ -DPKG_MC=ON \ -DPKG_MEAM=ON \ -DPKG_MGPT=ON \ -DPKG_MISC=ON \ -DPKG_MOFFF=ON \ -DPKG_MOLFILE=ON \ -DPKG_MPIIO=ON \ -DPKG_MOLECULE=ON \ -DPKG_NETCDF=ON \ -DPKG_OPENMP==ON \ -DPKG_OPT=ON \ -DPKG_ORIENT=ON \ -DPKG_PERI=ON \ -DPKG_PHONON=ON \ -DPKG_POEMS=ON \ -DPKG_PYTHON=ON \ -DPKG_QEQ=ON \ -DPKG_QTB=ON \ -DPKG_REAXFF=OFF \ -DPKG_REPLICA=ON \ -DPKG_RIGID=ON \ -DPKG_SHOCK=ON \ -DPKG_SMTBQ=ON \ -DPKG_SNAP=ON \ -DPKG_SPH=ON \ -DPKG_SRD=ON \ -DPKG_TALLY=ON \ -DPKG_UEF=ON \ -DPKG_VTK=ON \ -DPKG_VORONOI=ON dh_auto_configure: warning: Environment variable QMAKE points to non-existent tool x86_64-linux-gnu-qmake. Ignoring. cd debian/build && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=x86_64-linux-gnu-pkgconf cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON -DCMAKE_BUILD_RPATH_USE_ORIGIN=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_C_COMPILER=/usr/bin/x86_64-linux-gnu-gcc -DCMAKE_CXX_COMPILER=/usr/bin/x86_64-linux-gnu-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/x86_64-linux-gnu-pkgconf -DPKGCONFIG_EXECUTABLE=/usr/bin/x86_64-linux-gnu-pkgconf -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DBUILD_SHARED_LIBS=ON -DCMAKE_SKIP_INSTALL_RPATH=TRUE -DPKG_ASPHERE=ON -DPKG_ATC=ON -DPKG_AWPMD=ON -DPKG_BOCS=ON -DPKG_BODY=ON -DPKG_CG-DNA=ON -DPKG_CG-SPICA=ON -DPKG_CLASS2=ON -DPKG_COLLOID=ON -DPKG_COMPRESS=ON -DPKG_CORESHELL=ON -DPKG_EXTRA-COMPUTE=ON -DPKG_EXTRA-PAIR=ON -DPKG_DIELECTRIC=ON -DPKG_DIFFRACTION=ON -DPKG_DIPOLE=ON -DPKG_DPD-BASIC=ON -DPKG_DRUDE=ON -DPKG_EFF=ON -DPKG_ELECTRODE=ON -DUSE_INTERNAL_LINALG=no -DPKG_FEP=ON -DPKG_GPU=OFF -DPKG_GRANULAR=ON -DPKG_H5MD=ON -DPKG_KIM=ON -DPKG_KSPACE=ON -DPKG_LATBOLTZ=ON -DPKG_MANIFOLD=ON -DPKG_MANYBODY=ON -DPKG_MC=ON -DPKG_MEAM=ON -DPKG_MGPT=ON -DPKG_MISC=ON -DPKG_MOFFF=ON -DPKG_MOLFILE=ON -DPKG_MPIIO=ON -DPKG_MOLECULE=ON -DPKG_NETCDF=ON -DPKG_OPENMP==ON -DPKG_OPT=ON -DPKG_ORIENT=ON -DPKG_PERI=ON -DPKG_PHONON=ON -DPKG_POEMS=ON -DPKG_PYTHON=ON -DPKG_QEQ=ON -DPKG_QTB=ON -DPKG_REAXFF=OFF -DPKG_REPLICA=ON -DPKG_RIGID=ON -DPKG_SHOCK=ON -DPKG_SMTBQ=ON -DPKG_SNAP=ON -DPKG_SPH=ON -DPKG_SRD=ON -DPKG_TALLY=ON -DPKG_UEF=ON -DPKG_VTK=ON -DPKG_VORONOI=ON ../../cmake CMake Deprecation Warning at CMakeLists.txt:22 (cmake_policy): The OLD behavior for policy CMP0109 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. CMake Deprecation Warning at CMakeLists.txt:26 (cmake_policy): The OLD behavior for policy CMP0135 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. -- The CXX compiler identification is GNU 16.2.0 -- The C compiler identification is GNU 16.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/x86_64-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/x86_64-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Found Git: /usr/bin/git (found version "2.55.0") -- Running check for auto-generated files from make-based build system -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") found components: CXX -- Looking for C++ include omp.h -- Looking for C++ include omp.h - found -- Found OpenMP_CXX: -fopenmp (found version "5.2") -- Found OpenMP: TRUE (found version "5.2") found components: CXX -- Looking for sgemm_ -- Looking for sgemm_ - not found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for sgemm_ -- Looking for sgemm_ - found -- Found BLAS: /usr/lib/x86_64-linux-gnu/libblas.so -- Looking for cheev_ -- Looking for cheev_ - not found -- Looking for cheev_ -- Looking for cheev_ - found -- Found LAPACK: /usr/lib/x86_64-linux-gnu/liblapack.so;/usr/lib/x86_64-linux-gnu/libblas.so -- Found GZIP: /usr/bin/gzip -- Found PkgConfig: /usr/bin/x86_64-linux-gnu-pkgconf (found version "2.5.1") -- Checking for module 'fftw3' -- Found fftw3, version 3.3.11 -- Found FFTW3: /usr/lib/x86_64-linux-gnu/libfftw3.so -- Found Python: /usr/bin/python3 (found version "3.14.7") found components: Interpreter Development Development.Module Development.Embed -- Found VORO: /usr/lib/x86_64-linux-gnu/libvoro++.so -- Found NetCDF: /usr/lib/x86_64-linux-gnu/libnetcdf.so -- Found PNetCDF: /usr/lib/x86_64-linux-gnu/libpnetcdf.so -- Found Python3: /usr/bin/python3 (found suitable version "3.14.7", minimum required is "3.14") found components: Interpreter Development.Module Development.Embed -- Found nlohmann_json: /usr/share/cmake/nlohmann_json/nlohmann_jsonConfig.cmake (found version "3.11.3") -- Performing Test HAVE_STDATOMIC -- Performing Test HAVE_STDATOMIC - Success -- Found WrapAtomic: TRUE -- Found OpenGL: /usr/lib/x86_64-linux-gnu/libOpenGL.so -- Found WrapOpenGL: TRUE -- Found WrapVulkanHeaders: /usr/include -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") found components: C -- Found LibXml2: /usr/lib/x86_64-linux-gnu/libxml2.so (found version "2.15.4") -- Found HDF5: hdf5-shared (found version "2.2.0") found components: C HL CMake Warning (dev) at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.6/VTK-vtk-module-find-packages.cmake:450 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): /usr/lib/x86_64-linux-gnu/cmake/vtk-9.6/vtk-config.cmake:171 (include) Modules/Packages/VTK.cmake:3 (find_package) CMakeLists.txt:600 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.90.0/BoostConfig.cmake (found suitable exact version "1.90.0") -- Found NetCDF: /usr/include (found version "4.10.1") -- Found THEORA: /usr/lib/x86_64-linux-gnu/libtheora.so -- Found OGG: /usr/lib/x86_64-linux-gnu/libogg.so -- Found JsonCpp: /usr/lib/x86_64-linux-gnu/libjsoncpp.so (found suitable version "1.9.8", minimum required is "0.7.0") -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.3.2") -- Found PNG: /usr/lib/x86_64-linux-gnu/libpng.so (found version "1.6.58") -- Found GL2PS: /usr/lib/x86_64-linux-gnu/libgl2ps.so (found suitable version "1.4.2", minimum required is "1.4.2") -- Found LibPROJ: /usr/lib/x86_64-linux-gnu/libproj.so (found version "9.8.1") -- Found SQLite3: /usr/lib/x86_64-linux-gnu/libsqlite3.so (found version "3.53.4") -- Found Eigen3: /usr/include/eigen3 (found version "..") -- Found X11: /usr/include -- Looking for XOpenDisplay in /usr/lib/x86_64-linux-gnu/libX11.so;/usr/lib/x86_64-linux-gnu/libXext.so -- Looking for XOpenDisplay in /usr/lib/x86_64-linux-gnu/libX11.so;/usr/lib/x86_64-linux-gnu/libXext.so - found -- Looking for gethostbyname -- Looking for gethostbyname - found -- Looking for connect -- Looking for connect - found -- Looking for remove -- Looking for remove - found -- Looking for shmat -- Looking for shmat - found -- Looking for IceConnectionNumber in ICE -- Looking for IceConnectionNumber in ICE - found -- Found EXPAT: /usr/lib/x86_64-linux-gnu/libexpat.so (found suitable version "2.8.4", minimum required is "2.2.1") -- Found JPEG: /usr/lib/x86_64-linux-gnu/libjpeg.so (found version "62") -- Found TIFF: /usr/lib/x86_64-linux-gnu/libtiff.so (found version "4.7.2") -- Found LZ4: /usr/lib/x86_64-linux-gnu/liblz4.so (found version "1.10.0") -- Found LZMA: /usr/lib/x86_64-linux-gnu/liblzma.so (found version "5.8.4") -- Could NOT find freetype (missing: freetype_DIR) -- Found Freetype: /usr/lib/x86_64-linux-gnu/libfreetype.so (found version "2.14.3") -- Found utf8cpp: /usr/include/utf8cpp -- Found ExprTk: /usr/include (found suitable version "2.718281828459045235360287471352662497757247093699959574966967627724076630353547594571382178525166427427466391932003059921817413596629043572900334295260595630738132", minimum required is "0.0.3") -- Found CURL: /usr/lib/x86_64-linux-gnu/libcurl.so (found version "8.23.0-rc1") -- Found KIM-API: /usr/lib/x86_64-linux-gnu/libkim-api.so.2.4.1 -- Checking for module 'libzstd>=1.4' -- Found libzstd, version 1.5.7 -- Found HDF5: hdf5-shared (found version "2.2.0") found components: C -- Generating style headers... -- Generating package headers... -- Generating lmpinstalledpkgs.h... -- Found Python: /usr/bin/python3 (found version "3.14.7") found components: Interpreter -- Found Python3: /usr/bin/python3 (found version "3.14.7") found components: Interpreter -- The following tools and libraries have been found and configured: * Git * OpenMP * LAPACK * BLAS * FFTW3 * VORO * PNetCDF * Viskores * nlohmann_json * Qt6WidgetsTools (required version >= 6.11.2) * OpenGL * Qt6GuiTools (required version >= 6.11.2) * Qt6CoreTools (required version >= 6.11.2) * Qt6DBusTools (required version >= 6.11.2) * Qt6Widgets (required version >= 6.10) * MPI * LibXml2 * boost_headers (required version == 1.90.0) * Boost (required version == 1.90.0) * NetCDF * THEORA * OGG * JsonCpp (required version >= 0.7.0) * PNG * GL2PS (required version >= 1.4.2) * LibPROJ * Qt6Sql (required version >= 6.10) * SQLite3 * WrapVulkanHeaders * Qt6OpenGL (required version >= 6.10) * Qt6OpenGLWidgets (required version >= 6.10) * Qt6 (required version >= 6.10) * Eigen3 * X11 * EXPAT (required version >= 2.2.1) * JPEG * TIFF * LZ4 * LZMA * freetype * Freetype * utf8cpp * ExprTk (required version >= 0.0.3) * TBB * Threads * VTK * CURL * KIM-API (required version >= 2.2.0) * ZLIB * HDF5 * Python * Python3 -- <<< Build configuration >>> LAMMPS Version: 2026.7.4.0 Operating System: Linux Debian CMake Version: 4.3.4 Build type: None Install path: /usr Generator: Unix Makefiles using /usr/bin/gmake -- Enabled packages: ASPHERE;BOCS;BODY;CG-DNA;CG-SPICA;CLASS2;COLLOID;COMPRESS;CORESHELL;DIELECTRIC;DIFFRACTION;DIPOLE;DPD-BASIC;DRUDE;EFF;ELECTRODE;EXTRA-COMPUTE;EXTRA-PAIR;FEP;GRANULAR;H5MD;KIM;KSPACE;LATBOLTZ;MANIFOLD;MANYBODY;MC;MEAM;MGPT;MISC;MOFFF;MOLECULE;MOLFILE;NETCDF;OPENMP;OPT;ORIENT;PERI;PHONON;PYTHON;QEQ;QTB;REPLICA;RIGID;SHOCK;SMTBQ;SPH;SRD;TALLY;UEF;VORONOI;VTK -- <<< Compilers and Flags: >>> -- C++ Compiler: /usr/bin/x86_64-linux-gnu-g++ Type: GNU Version: 16.2.0 C++ Standard: 17 C++ Flags: -g -O2 -ffile-prefix-map=/build/lammps-rlhK5n/lammps-20260704+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 Defines: LAMMPS_SMALLBIG;LAMMPS_MEMALIGN=64;LAMMPS_OMP_COMPAT=4;LAMMPS_GZIP;FFT_FFTW3;FFT_FFTW_THREADS;LMP_PYTHON;LMP_HAS_NETCDF;LMP_HAS_PNETCDF;NC_64BIT_DATA=0x0020;LAMMPS_VTK;LMP_KIM_CURL;LAMMPS_ZSTD;LMP_OPENMP -- C compiler: /usr/bin/x86_64-linux-gnu-gcc Type: GNU Version: 16.2.0 C Flags: -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/lammps-rlhK5n/lammps-20260704+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -- <<< Linker flags: >>> -- Executable name: lmp -- Executable linker flags: -Wl,-z,relro -- Shared library flags: -Wl,-z,relro -- <<< MPI flags >>> -- MPI_defines: MPICH_SKIP_MPICXX;OMPI_SKIP_MPICXX;_MPICC_H -- MPI includes: /usr/lib/x86_64-linux-gnu/openmpi/include;/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -- MPI libraries: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so; -- <<< FFT settings >>> -- Primary FFT lib: FFTW3 -- Using double precision FFTs -- Using threaded FFTs -- Using builtin distributed FFT algorithms -- Configuring done (7.5s) -- Generating done (0.3s) -- Build files have been written to: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build make[1]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' dh_auto_build -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build cd debian/build && make -j2 INSTALL="install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' /usr/bin/cmake -P /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/VerifyGlobs.cmake /usr/bin/cmake -S/build/lammps-rlhK5n/lammps-20260704+dfsg/cmake -B/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/json_json.hpp.dir/build.make CMakeFiles/json_json.hpp.dir/depend make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/json_json.hpp.dir/DependInfo.cmake "--color=" json_json.hpp make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/h5md.dir/DependInfo.cmake "--color=" h5md make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/json_json.hpp.dir/build.make CMakeFiles/json_json.hpp.dir/build make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 0%] Generating includes/lammps/nlohmann/json.hpp /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/nlohmann/json.hpp /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/nlohmann/json.hpp [ 0%] Building C object CMakeFiles/h5md.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/lib/h5md/src/ch5md.c.o /usr/bin/x86_64-linux-gnu-gcc -DH5_BUILT_AS_DYNAMIC_LIB -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -D_LARGEFILE_SOURCE -D_POSIX_C_SOURCE=200809L -I/build/lammps-rlhK5n/lammps-20260704+dfsg/lib/h5md/include -isystem /usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/lammps-rlhK5n/lammps-20260704+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/h5md.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/lib/h5md/src/ch5md.c.o -MF CMakeFiles/h5md.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/lib/h5md/src/ch5md.c.o.d -o CMakeFiles/h5md.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/lib/h5md/src/ch5md.c.o -c /build/lammps-rlhK5n/lammps-20260704+dfsg/lib/h5md/src/ch5md.c make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 0%] Built target json_json.hpp make -f CMakeFiles/gitversion.dir/build.make CMakeFiles/gitversion.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/gitversion.dir/DependInfo.cmake "--color=" gitversion make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/gitversion.dir/build.make CMakeFiles/gitversion.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' /usr/bin/cmake -DLAMMPS_DIR="/build/lammps-rlhK5n/lammps-20260704+dfsg" -DGIT_EXECUTABLE="/usr/bin/git" -DGIT_FOUND="TRUE" -DLAMMPS_STYLE_HEADERS_DIR="/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/styles" -P /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake/Modules/generate_lmpgitversion.cmake -- Git Directory: /build/lammps-rlhK5n/lammps-20260704+dfsg/.git -- Generating lmpgitversion.h... make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 0%] Built target gitversion make -f CMakeFiles/angle.h.dir/build.make CMakeFiles/angle.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/angle.h.dir/DependInfo.cmake "--color=" angle.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/angle.h.dir/build.make CMakeFiles/angle.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 0%] Generating includes/lammps/angle.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/angle.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/angle.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 0%] Built target angle.h make -f CMakeFiles/atom.h.dir/build.make CMakeFiles/atom.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/atom.h.dir/DependInfo.cmake "--color=" atom.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/atom.h.dir/build.make CMakeFiles/atom.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 0%] Generating includes/lammps/atom.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/atom.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/atom.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 0%] Built target atom.h make -f CMakeFiles/bond.h.dir/build.make CMakeFiles/bond.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/bond.h.dir/DependInfo.cmake "--color=" bond.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/bond.h.dir/build.make CMakeFiles/bond.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 0%] Generating includes/lammps/bond.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/bond.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/bond.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 0%] Built target bond.h make -f CMakeFiles/citeme.h.dir/build.make CMakeFiles/citeme.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/citeme.h.dir/DependInfo.cmake "--color=" citeme.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/citeme.h.dir/build.make CMakeFiles/citeme.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 0%] Generating includes/lammps/citeme.h /usr/bin/cmake -E copy_if_different 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"--color=" comm.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/comm.h.dir/build.make CMakeFiles/comm.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' /usr/bin/x86_64-linux-gnu-ar qc liblammps_h5md.a "CMakeFiles/h5md.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/lib/h5md/src/ch5md.c.o" /usr/bin/x86_64-linux-gnu-ranlib liblammps_h5md.a make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 0%] Generating includes/lammps/comm.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/comm.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/comm.h [ 0%] Built target h5md make -f CMakeFiles/command.h.dir/build.make CMakeFiles/command.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/command.h.dir/DependInfo.cmake "--color=" command.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/command.h.dir/build.make CMakeFiles/command.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 0%] Built target comm.h make -f CMakeFiles/compute.h.dir/build.make CMakeFiles/compute.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/compute.h.dir/DependInfo.cmake "--color=" compute.h [ 0%] Generating includes/lammps/command.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/command.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/command.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/compute.h.dir/build.make CMakeFiles/compute.h.dir/build make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 0%] Generating includes/lammps/compute.h [ 0%] Built target command.h make -f CMakeFiles/dihedral.h.dir/build.make CMakeFiles/dihedral.h.dir/depend /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/compute.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/compute.h make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/dihedral.h.dir/DependInfo.cmake "--color=" dihedral.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/dihedral.h.dir/build.make CMakeFiles/dihedral.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 0%] Built target compute.h make -f CMakeFiles/domain.h.dir/build.make CMakeFiles/domain.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/domain.h.dir/DependInfo.cmake "--color=" domain.h [ 0%] Generating includes/lammps/dihedral.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/dihedral.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/dihedral.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/domain.h.dir/build.make CMakeFiles/domain.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 0%] Built target dihedral.h make -f CMakeFiles/error.h.dir/build.make CMakeFiles/error.h.dir/depend [ 0%] Generating includes/lammps/domain.h make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/error.h.dir/DependInfo.cmake "--color=" error.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/domain.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/domain.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/error.h.dir/build.make CMakeFiles/error.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 0%] Built target domain.h make -f CMakeFiles/exceptions.h.dir/build.make CMakeFiles/exceptions.h.dir/depend [ 0%] Generating includes/lammps/error.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/error.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/error.h make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/exceptions.h.dir/DependInfo.cmake "--color=" exceptions.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/exceptions.h.dir/build.make CMakeFiles/exceptions.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 0%] Built target error.h make -f CMakeFiles/fix.h.dir/build.make CMakeFiles/fix.h.dir/depend [ 1%] Generating includes/lammps/exceptions.h make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/fix.h.dir/DependInfo.cmake "--color=" fix.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/exceptions.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/exceptions.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/fix.h.dir/build.make CMakeFiles/fix.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 1%] Built target exceptions.h make -f CMakeFiles/force.h.dir/build.make CMakeFiles/force.h.dir/depend [ 1%] Generating includes/lammps/fix.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/fix.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/fix.h make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/force.h.dir/DependInfo.cmake "--color=" force.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/force.h.dir/build.make CMakeFiles/force.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 1%] Built target fix.h make -f CMakeFiles/group.h.dir/build.make CMakeFiles/group.h.dir/depend [ 1%] Generating includes/lammps/force.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/force.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/force.h make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/group.h.dir/DependInfo.cmake "--color=" group.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/group.h.dir/build.make CMakeFiles/group.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 1%] Built target force.h [ 1%] Generating includes/lammps/group.h make -f CMakeFiles/improper.h.dir/build.make CMakeFiles/improper.h.dir/depend /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/group.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/group.h make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/improper.h.dir/DependInfo.cmake "--color=" improper.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/improper.h.dir/build.make CMakeFiles/improper.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 1%] Built target group.h make -f CMakeFiles/input.h.dir/build.make CMakeFiles/input.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/input.h.dir/DependInfo.cmake "--color=" input.h [ 1%] Generating includes/lammps/improper.h /usr/bin/cmake -E copy_if_different 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/build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/info.h.dir/DependInfo.cmake "--color=" info.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/info.h.dir/build.make CMakeFiles/info.h.dir/build [ 2%] Built target input.h make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/json.h.dir/build.make CMakeFiles/json.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/json.h.dir/DependInfo.cmake "--color=" json.h [ 2%] Generating includes/lammps/info.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/info.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/info.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/json.h.dir/build.make CMakeFiles/json.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 2%] Generating includes/lammps/json.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/json.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/json.h [ 2%] Built target info.h make -f CMakeFiles/json_fwd.h.dir/build.make CMakeFiles/json_fwd.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/json_fwd.h.dir/DependInfo.cmake "--color=" json_fwd.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/json_fwd.h.dir/build.make CMakeFiles/json_fwd.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 2%] Built target json.h make -f CMakeFiles/kspace.h.dir/build.make CMakeFiles/kspace.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/kspace.h.dir/DependInfo.cmake "--color=" kspace.h [ 2%] Generating includes/lammps/json_fwd.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/json_fwd.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/json_fwd.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/kspace.h.dir/build.make CMakeFiles/kspace.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 2%] Generating includes/lammps/kspace.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/kspace.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/kspace.h [ 2%] Built target json_fwd.h make -f CMakeFiles/lammps.h.dir/build.make CMakeFiles/lammps.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/lammps.h.dir/DependInfo.cmake "--color=" lammps.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/lammps.h.dir/build.make CMakeFiles/lammps.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 2%] Built target kspace.h make -f CMakeFiles/lattice.h.dir/build.make CMakeFiles/lattice.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/lattice.h.dir/DependInfo.cmake "--color=" lattice.h [ 2%] Generating includes/lammps/lammps.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/lammps.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/lammps.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/lattice.h.dir/build.make CMakeFiles/lattice.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 2%] Generating includes/lammps/lattice.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/lattice.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/lattice.h [ 2%] Built target lammps.h make -f CMakeFiles/library.h.dir/build.make CMakeFiles/library.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/library.h.dir/DependInfo.cmake "--color=" library.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/library.h.dir/build.make CMakeFiles/library.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 2%] Built target lattice.h make -f CMakeFiles/lmppython.h.dir/build.make CMakeFiles/lmppython.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/lmppython.h.dir/DependInfo.cmake "--color=" lmppython.h [ 2%] Generating includes/lammps/library.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/library.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/library.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/lmppython.h.dir/build.make CMakeFiles/lmppython.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 2%] Generating includes/lammps/lmppython.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/lmppython.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/lmppython.h [ 2%] Built target library.h make -f CMakeFiles/lmptype.h.dir/build.make CMakeFiles/lmptype.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/lmptype.h.dir/DependInfo.cmake "--color=" lmptype.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/lmptype.h.dir/build.make CMakeFiles/lmptype.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 2%] Built target lmppython.h make -f CMakeFiles/memory.h.dir/build.make CMakeFiles/memory.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/memory.h.dir/DependInfo.cmake "--color=" memory.h [ 2%] Generating includes/lammps/lmptype.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/lmptype.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/lmptype.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/memory.h.dir/build.make CMakeFiles/memory.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 3%] Generating includes/lammps/memory.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/memory.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/memory.h [ 3%] Built target lmptype.h make -f CMakeFiles/modify.h.dir/build.make CMakeFiles/modify.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/modify.h.dir/DependInfo.cmake "--color=" modify.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/modify.h.dir/build.make CMakeFiles/modify.h.dir/build [ 3%] Built target memory.h make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/neighbor.h.dir/build.make CMakeFiles/neighbor.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/neighbor.h.dir/DependInfo.cmake "--color=" neighbor.h [ 3%] Generating includes/lammps/modify.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/modify.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/modify.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/neighbor.h.dir/build.make CMakeFiles/neighbor.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 3%] Generating includes/lammps/neighbor.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/neighbor.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/neighbor.h [ 3%] Built target modify.h make -f CMakeFiles/neigh_list.h.dir/build.make CMakeFiles/neigh_list.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/neigh_list.h.dir/DependInfo.cmake "--color=" neigh_list.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/neigh_list.h.dir/build.make CMakeFiles/neigh_list.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 3%] Built target neighbor.h make -f CMakeFiles/output.h.dir/build.make CMakeFiles/output.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/output.h.dir/DependInfo.cmake "--color=" output.h [ 3%] Generating includes/lammps/neigh_list.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/neigh_list.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/neigh_list.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/output.h.dir/build.make CMakeFiles/output.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 3%] Generating includes/lammps/output.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/output.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/output.h [ 3%] Built target neigh_list.h make -f CMakeFiles/pair.h.dir/build.make CMakeFiles/pair.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/pair.h.dir/DependInfo.cmake "--color=" pair.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/pair.h.dir/build.make CMakeFiles/pair.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 3%] Built target output.h make -f CMakeFiles/platform.h.dir/build.make CMakeFiles/platform.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/platform.h.dir/DependInfo.cmake "--color=" platform.h [ 3%] Generating includes/lammps/pair.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/pair.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/pair.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/platform.h.dir/build.make CMakeFiles/platform.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 3%] Generating includes/lammps/platform.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/platform.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/platform.h [ 3%] Built target pair.h make -f CMakeFiles/pointers.h.dir/build.make CMakeFiles/pointers.h.dir/depend make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/pointers.h.dir/DependInfo.cmake "--color=" pointers.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/pointers.h.dir/build.make CMakeFiles/pointers.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 3%] Built target platform.h make -f CMakeFiles/region.h.dir/build.make CMakeFiles/region.h.dir/depend [ 3%] Generating includes/lammps/pointers.h make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/region.h.dir/DependInfo.cmake "--color=" region.h /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/pointers.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/pointers.h make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/region.h.dir/build.make CMakeFiles/region.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 3%] Built target pointers.h make -f CMakeFiles/timer.h.dir/build.make CMakeFiles/timer.h.dir/depend make[3]: Entering directory 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'/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/fmt_format.h.dir/build.make CMakeFiles/fmt_format.h.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 4%] Built target fmt_core.h [ 4%] Generating includes/lammps/fmt/format.h make -f CMakeFiles/json_json_fwd.hpp.dir/build.make CMakeFiles/json_json_fwd.hpp.dir/depend /usr/bin/cmake -E copy_if_different /build/lammps-rlhK5n/lammps-20260704+dfsg/src/fmt/format.h /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes/lammps/fmt/format.h make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build 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'/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' cd /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/cmake /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/CMakeFiles/lammps.dir/DependInfo.cmake "--color=" lammps make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/build make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build' [ 4%] Building CXX object CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/angle_deprecated.cpp.o [ 4%] Building CXX object CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/angle.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DFMT_SHARED -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLAMMPS_ZSTD -DLMP_HAS_NETCDF -DLMP_HAS_PNETCDF -DLMP_KIM_CURL -DLMP_OPENMP -DLMP_PYTHON -DMPICH_SKIP_MPICXX -DNC_64BIT_DATA=0x0020 -DOMPI_SKIP_MPICXX -DSCN_DISABLE_FAST_FLOAT=0 -DSCN_DISABLE_REGEX=0 -DSCN_REGEX_BACKEND=0 -D_MPICC_H -Dkiss_fft_scalar=double -Dlammps_EXPORTS -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src -I/build/lammps-rlhK5n/lammps-20260704+dfsg/third_party -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src/ASPHERE -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src/BOCS -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src/BODY -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src/CG-DNA -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src/CG-SPICA -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src/CLASS2 -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src/COLLOID -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src/COMPRESS -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src/DIELECTRIC 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CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_linalg.cpp.o -MF CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_linalg.cpp.o.d -o CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_linalg.cpp.o -c /build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_linalg.cpp [ 64%] Building CXX object CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DFMT_SHARED -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLAMMPS_ZSTD -DLMP_HAS_NETCDF -DLMP_HAS_PNETCDF -DLMP_KIM_CURL -DLMP_OPENMP -DLMP_PYTHON -DMPICH_SKIP_MPICXX -DNC_64BIT_DATA=0x0020 -DOMPI_SKIP_MPICXX -DSCN_DISABLE_FAST_FLOAT=0 -DSCN_DISABLE_REGEX=0 -DSCN_REGEX_BACKEND=0 -D_MPICC_H -Dkiss_fft_scalar=double -Dlammps_EXPORTS -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src 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CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp.o -MF CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp.o.d -o CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp.o -c /build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp /build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp: In member function ‘void potdata::readpot(const char*, const char*, double)’: /build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp:188:17: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 188 | (void) fgets(line,sizeof(line),in); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp:204:17: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 204 | (void) fgets(line,sizeof(line),in); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp:247:19: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 247 | (void) fgets(line,sizeof(line),in); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp:307:17: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 307 | (void) fgets(line,sizeof(line),in); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp:330:17: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 330 | (void) fgets(line,sizeof(line),in); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp:332:17: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 332 | (void) fgets(line,sizeof(line),in); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp:335:17: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 335 | (void) fgets(line,sizeof(line),in); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp:344:17: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 344 | (void) fgets(line,sizeof(line),in); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp:346:17: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 346 | (void) fgets(line,sizeof(line),in); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp:359:19: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 359 | (void) fgets(line,sizeof(line),in); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp: In function ‘void getparmindata(const char*, int*, double*, double*, double*)’: /build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp:110:17: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 110 | (void) fgets(line,sizeof(line),in); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp:120:19: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 120 | (void) fgets(line,sizeof(line),in); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_readpot.cpp:124:19: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 124 | (void) fgets(line,sizeof(line),in); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ [ 64%] Building CXX object CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/MGPT/mgpt_splinetab.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DFMT_SHARED -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLAMMPS_ZSTD -DLMP_HAS_NETCDF -DLMP_HAS_PNETCDF -DLMP_KIM_CURL -DLMP_OPENMP -DLMP_PYTHON -DMPICH_SKIP_MPICXX -DNC_64BIT_DATA=0x0020 -DOMPI_SKIP_MPICXX -DSCN_DISABLE_FAST_FLOAT=0 -DSCN_DISABLE_REGEX=0 -DSCN_REGEX_BACKEND=0 -D_MPICC_H -Dkiss_fft_scalar=double -Dlammps_EXPORTS -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src -I/build/lammps-rlhK5n/lammps-20260704+dfsg/third_party 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CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/fix_neigh_history_omp.cpp.o -MF CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/fix_neigh_history_omp.cpp.o.d -o CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/fix_neigh_history_omp.cpp.o -c /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/fix_neigh_history_omp.cpp /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/fix_gravity_omp.cpp: In member function ‘virtual void LAMMPS_NS::FixGravityOMP::post_force(int)’: /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/fix_gravity_omp.cpp:75:53: warning: ‘-’ operator for reductions deprecated in OpenMP 5.2 [-Wdeprecated-openmp] 75 | #pragma omp parallel for LMP_DEFAULT_NONE reduction(-:grav) | ^ | + /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/fix_gravity_omp.cpp:87:53: warning: ‘-’ operator for reductions deprecated in OpenMP 5.2 [-Wdeprecated-openmp] 87 | #pragma omp parallel for LMP_DEFAULT_NONE 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/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/fix_neigh_history_omp.cpp: In member function ‘virtual void LAMMPS_NS::FixNeighHistoryOMP::pre_exchange_newton()’: /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/fix_neigh_history_omp.cpp:268:19: warning: ‘master’ construct deprecated since OpenMP 5.1, use ‘masked’ [-Wdeprecated-openmp] 268 | #pragma omp master | ^ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/fix_neigh_history_omp.cpp:289:19: warning: ‘master’ construct deprecated since OpenMP 5.1, use ‘masked’ [-Wdeprecated-openmp] 289 | #pragma omp master | ^ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/fix_neigh_history_omp.cpp:345:19: warning: ‘master’ construct deprecated since OpenMP 5.1, use ‘masked’ [-Wdeprecated-openmp] 345 | #pragma omp master | ^ [ 82%] Building CXX object CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/fix_nph_sphere_omp.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DFMT_SHARED 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/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/python3.14 -isystem /usr/include/voro++ -isystem /usr/include/vtk-9.6 -isystem /usr/include/vtk-9.6/vtkfmt -isystem /usr/include/vtk-9.6/vtkscn/include -isystem /usr/include/vtk-9.6/vtkscn -isystem /usr/include/vtk-9.6/token -isystem /usr/include/vtk-9.6/vtkkissfft -isystem /usr/lib/x86_64-linux-gnu/kim-api/mod -isystem /usr/include/kim-api -g -O2 -ffile-prefix-map=/build/lammps-rlhK5n/lammps-20260704+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -fPIC -fopenmp -MD -MT CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_lubricate_omp.cpp.o -MF CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_lubricate_omp.cpp.o.d -o CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_lubricate_omp.cpp.o -c /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_lubricate_omp.cpp /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_lubricate_omp.cpp: In member function ‘void LAMMPS_NS::PairLubricateOMP::eval(int, int, LAMMPS_NS::ThrData*)’: /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_lubricate_omp.cpp:214:19: warning: ‘master’ construct deprecated since OpenMP 5.1, use ‘masked’ [-Wdeprecated-openmp] 214 | #pragma omp master | ^ [ 88%] Building CXX object CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_lubricate_poly_omp.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DFMT_SHARED -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLAMMPS_ZSTD -DLMP_HAS_NETCDF -DLMP_HAS_PNETCDF -DLMP_KIM_CURL -DLMP_OPENMP -DLMP_PYTHON -DMPICH_SKIP_MPICXX -DNC_64BIT_DATA=0x0020 -DOMPI_SKIP_MPICXX -DSCN_DISABLE_FAST_FLOAT=0 -DSCN_DISABLE_REGEX=0 -DSCN_REGEX_BACKEND=0 -D_MPICC_H 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-I/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPT -I/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/styles -I/build/lammps-rlhK5n/lammps-20260704+dfsg/lib/molfile -I/build/lammps-rlhK5n/lammps-20260704+dfsg/lib/h5md/include -I/usr/include/hdf5/serial -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/python3.14 -isystem /usr/include/voro++ -isystem /usr/include/vtk-9.6 -isystem /usr/include/vtk-9.6/vtkfmt -isystem /usr/include/vtk-9.6/vtkscn/include -isystem /usr/include/vtk-9.6/vtkscn -isystem /usr/include/vtk-9.6/token -isystem /usr/include/vtk-9.6/vtkkissfft -isystem /usr/lib/x86_64-linux-gnu/kim-api/mod -isystem /usr/include/kim-api -g -O2 -ffile-prefix-map=/build/lammps-rlhK5n/lammps-20260704+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -fPIC -fopenmp -MD -MT CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_lubricate_poly_omp.cpp.o -MF CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_lubricate_poly_omp.cpp.o.d -o CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_lubricate_poly_omp.cpp.o -c /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_lubricate_poly_omp.cpp /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_lubricate_poly_omp.cpp: In member function ‘void LAMMPS_NS::PairLubricatePolyOMP::eval(int, int, LAMMPS_NS::ThrData*)’: /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_lubricate_poly_omp.cpp:214:19: warning: ‘master’ construct deprecated since OpenMP 5.1, use ‘masked’ [-Wdeprecated-openmp] 214 | #pragma omp master | ^ [ 89%] Building CXX object CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_yukawa_colloid_omp.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DFMT_SHARED 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CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_adp_omp.cpp.o -MF CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_adp_omp.cpp.o.d -o CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_adp_omp.cpp.o -c /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_adp_omp.cpp /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_adp_omp.cpp: In member function ‘void LAMMPS_NS::PairADPOMP::eval(int, int, LAMMPS_NS::ThrData*)’: /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_adp_omp.cpp:214:19: warning: ‘master’ construct deprecated since OpenMP 5.1, use ‘masked’ [-Wdeprecated-openmp] 214 | #pragma omp master | ^ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_adp_omp.cpp:263:19: warning: ‘master’ construct deprecated since OpenMP 5.1, use ‘masked’ [-Wdeprecated-openmp] 263 | #pragma omp master | ^ [ 95%] Building CXX object 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-isystem /usr/include/vtk-9.6/vtkkissfft -isystem /usr/lib/x86_64-linux-gnu/kim-api/mod -isystem /usr/include/kim-api -g -O2 -ffile-prefix-map=/build/lammps-rlhK5n/lammps-20260704+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -fPIC -fopenmp -MD -MT CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_eam_omp.cpp.o -MF CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_eam_omp.cpp.o.d -o CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_eam_omp.cpp.o -c /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_eam_omp.cpp /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_eam_omp.cpp: In member function ‘void LAMMPS_NS::PairEAMOMP::eval(int, int, int*, LAMMPS_NS::ThrData*)’: /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_eam_omp.cpp:187:19: warning: ‘master’ construct deprecated since OpenMP 5.1, use ‘masked’ [-Wdeprecated-openmp] 187 | #pragma omp master | ^ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_eam_omp.cpp:232:19: warning: ‘master’ construct deprecated since OpenMP 5.1, use ‘masked’ [-Wdeprecated-openmp] 232 | #pragma omp master | ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_eam_alloy_omp.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DFMT_SHARED -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLAMMPS_ZSTD -DLMP_HAS_NETCDF -DLMP_HAS_PNETCDF -DLMP_KIM_CURL -DLMP_OPENMP -DLMP_PYTHON -DMPICH_SKIP_MPICXX -DNC_64BIT_DATA=0x0020 -DOMPI_SKIP_MPICXX -DSCN_DISABLE_FAST_FLOAT=0 -DSCN_DISABLE_REGEX=0 -DSCN_REGEX_BACKEND=0 -D_MPICC_H -Dkiss_fft_scalar=double -Dlammps_EXPORTS -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src -I/build/lammps-rlhK5n/lammps-20260704+dfsg/third_party -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src/ASPHERE 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-I/build/lammps-rlhK5n/lammps-20260704+dfsg/lib/h5md/include -I/usr/include/hdf5/serial -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/python3.14 -isystem /usr/include/voro++ -isystem /usr/include/vtk-9.6 -isystem /usr/include/vtk-9.6/vtkfmt -isystem /usr/include/vtk-9.6/vtkscn/include -isystem /usr/include/vtk-9.6/vtkscn -isystem /usr/include/vtk-9.6/token -isystem /usr/include/vtk-9.6/vtkkissfft -isystem /usr/lib/x86_64-linux-gnu/kim-api/mod -isystem /usr/include/kim-api -g -O2 -ffile-prefix-map=/build/lammps-rlhK5n/lammps-20260704+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -fPIC -fopenmp -MD -MT CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_eam_alloy_omp.cpp.o -MF CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_eam_alloy_omp.cpp.o.d 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/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/python3.14 -isystem /usr/include/voro++ -isystem /usr/include/vtk-9.6 -isystem /usr/include/vtk-9.6/vtkfmt -isystem /usr/include/vtk-9.6/vtkscn/include -isystem /usr/include/vtk-9.6/vtkscn -isystem /usr/include/vtk-9.6/token -isystem /usr/include/vtk-9.6/vtkkissfft -isystem /usr/lib/x86_64-linux-gnu/kim-api/mod -isystem /usr/include/kim-api -g -O2 -ffile-prefix-map=/build/lammps-rlhK5n/lammps-20260704+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -fPIC -fopenmp -MD -MT CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_eim_omp.cpp.o -MF CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_eim_omp.cpp.o.d -o CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_eim_omp.cpp.o -c /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_eim_omp.cpp /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_eim_omp.cpp: In member function ‘void LAMMPS_NS::PairEIMOMP::eval(int, int, LAMMPS_NS::ThrData*)’: /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_eim_omp.cpp:173:19: warning: ‘master’ construct deprecated since OpenMP 5.1, use ‘masked’ [-Wdeprecated-openmp] 173 | #pragma omp master | ^ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_eim_omp.cpp:189:19: warning: ‘master’ construct deprecated since OpenMP 5.1, use ‘masked’ [-Wdeprecated-openmp] 189 | #pragma omp master | ^ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_eim_omp.cpp:247:19: warning: ‘master’ construct deprecated since OpenMP 5.1, use ‘masked’ [-Wdeprecated-openmp] 247 | #pragma omp master | ^ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_eim_omp.cpp:263:19: warning: ‘master’ construct deprecated since OpenMP 5.1, use ‘masked’ [-Wdeprecated-openmp] 263 | #pragma omp master | ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_extep_omp.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DFMT_SHARED -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLAMMPS_ZSTD -DLMP_HAS_NETCDF -DLMP_HAS_PNETCDF -DLMP_KIM_CURL -DLMP_OPENMP -DLMP_PYTHON -DMPICH_SKIP_MPICXX -DNC_64BIT_DATA=0x0020 -DOMPI_SKIP_MPICXX -DSCN_DISABLE_FAST_FLOAT=0 -DSCN_DISABLE_REGEX=0 -DSCN_REGEX_BACKEND=0 -D_MPICC_H -Dkiss_fft_scalar=double -Dlammps_EXPORTS -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src -I/build/lammps-rlhK5n/lammps-20260704+dfsg/third_party -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src/ASPHERE -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src/BOCS -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src/BODY -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src/CG-DNA -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src/CG-SPICA 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[-Wdeprecated-openmp] 138 | #pragma omp master | ^ /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_local_density_omp.cpp:192:19: warning: ‘master’ construct deprecated since OpenMP 5.1, use ‘masked’ [-Wdeprecated-openmp] 192 | #pragma omp master | ^ [ 96%] Building CXX object CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPENMP/pair_meam_spline_omp.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DFMT_SHARED -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLAMMPS_ZSTD -DLMP_HAS_NETCDF -DLMP_HAS_PNETCDF -DLMP_KIM_CURL -DLMP_OPENMP -DLMP_PYTHON -DMPICH_SKIP_MPICXX -DNC_64BIT_DATA=0x0020 -DOMPI_SKIP_MPICXX -DSCN_DISABLE_FAST_FLOAT=0 -DSCN_DISABLE_REGEX=0 -DSCN_REGEX_BACKEND=0 -D_MPICC_H -Dkiss_fft_scalar=double -Dlammps_EXPORTS -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src -I/build/lammps-rlhK5n/lammps-20260704+dfsg/third_party -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src/ASPHERE 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CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPT/pair_eam_alloy_opt.cpp.o -MF CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPT/pair_eam_alloy_opt.cpp.o.d -o CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPT/pair_eam_alloy_opt.cpp.o -c /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPT/pair_eam_alloy_opt.cpp [100%] Building CXX object CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPT/pair_eam_fs_opt.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DFMT_SHARED -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLAMMPS_ZSTD -DLMP_HAS_NETCDF -DLMP_HAS_PNETCDF -DLMP_KIM_CURL -DLMP_OPENMP -DLMP_PYTHON -DMPICH_SKIP_MPICXX -DNC_64BIT_DATA=0x0020 -DOMPI_SKIP_MPICXX -DSCN_DISABLE_FAST_FLOAT=0 -DSCN_DISABLE_REGEX=0 -DSCN_REGEX_BACKEND=0 -D_MPICC_H -Dkiss_fft_scalar=double -Dlammps_EXPORTS -I/build/lammps-rlhK5n/lammps-20260704+dfsg/src 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CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPT/pair_eam_fs_opt.cpp.o -MF CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPT/pair_eam_fs_opt.cpp.o.d -o CMakeFiles/lammps.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPT/pair_eam_fs_opt.cpp.o -c /build/lammps-rlhK5n/lammps-20260704+dfsg/src/OPT/pair_eam_fs_opt.cpp [100%] Linking CXX shared library liblammps.so /usr/bin/cmake -E cmake_link_script CMakeFiles/lammps.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/lammps-rlhK5n/lammps-20260704+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -shared -Wl,-z,relro -Wl,--dependency-file=CMakeFiles/lammps.dir/link.d -Wl,-soname,liblammps.so.0 -o liblammps.so.0 @CMakeFiles/lammps.dir/objects1.rsp -Wl,-rpath,/usr/lib/x86_64-linux-gnu/openmpi/lib: /usr/lib/x86_64-linux-gnu/libfftw3.so 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-I/build/lammps-rlhK5n/lammps-20260704+dfsg/src -I/build/lammps-rlhK5n/lammps-20260704+dfsg/third_party -I/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/includes -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/lammps-rlhK5n/lammps-20260704+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -fPIE -fopenmp -MD -MT CMakeFiles/lmp.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/main.cpp.o -MF CMakeFiles/lmp.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/main.cpp.o.d -o CMakeFiles/lmp.dir/build/lammps-rlhK5n/lammps-20260704+dfsg/src/main.cpp.o -c /build/lammps-rlhK5n/lammps-20260704+dfsg/src/main.cpp [100%] Linking CXX executable lmp /usr/bin/cmake -E cmake_link_script CMakeFiles/lmp.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-g++ -g -O2 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directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' # debian/patches/30_build_docs.patch drops the sphinxfortran Sphinx # extension (not packaged in Debian), so every :f: role/directive # in the Fortran API docs now triggers an "unknown role/directive" # docutils warning; there are hundreds of them, each with several # lines of context, which used to flood the build log. Send Sphinx's # warnings to a file instead of stderr; a real failure still fails # the build (only the warning text moves), and the file remains # available for inspection. /usr/bin/make -C doc html SPHINXEXTRA="-j 2 -q -w /build/lammps-rlhK5n/lammps-20260704+dfsg/doc-sphinx-warnings.log" make[2]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/doc' WARNING: The directory '/sbuild-nonexistent/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag. Requirement already satisfied: pip in ./docenv/lib/python3.14/site-packages (26.1.2) WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError("HTTPSConnection(host='127.0.0.1', port=9): Failed to establish a new connection: [Errno 111] Connection refused")': /simple/pip/ WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError("HTTPSConnection(host='127.0.0.1', port=9): Failed to establish a new connection: [Errno 111] Connection refused")': /simple/pip/ WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError("HTTPSConnection(host='127.0.0.1', port=9): Failed to establish a new connection: [Errno 111] Connection refused")': /simple/pip/ WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError("HTTPSConnection(host='127.0.0.1', port=9): Failed to establish a new connection: [Errno 111] Connection refused")': /simple/pip/ WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError("HTTPSConnection(host='127.0.0.1', port=9): Failed to establish a new connection: [Errno 111] Connection refused")': /simple/pip/ WARNING: The directory '/sbuild-nonexistent/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag. WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError("HTTPSConnection(host='127.0.0.1', port=9): Failed to establish a new connection: [Errno 111] Connection refused")': /simple/wheel/ WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError("HTTPSConnection(host='127.0.0.1', port=9): Failed to establish a new connection: [Errno 111] Connection refused")': /simple/wheel/ WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError("HTTPSConnection(host='127.0.0.1', port=9): Failed to establish a new connection: [Errno 111] Connection refused")': /simple/wheel/ WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError("HTTPSConnection(host='127.0.0.1', port=9): Failed to establish a new connection: [Errno 111] Connection refused")': /simple/wheel/ WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError("HTTPSConnection(host='127.0.0.1', port=9): Failed to establish a new connection: [Errno 111] Connection refused")': /simple/wheel/ ERROR: Could not find a version that satisfies the requirement wheel (from versions: none) ERROR: No matching distribution found for wheel WARNING: The directory '/sbuild-nonexistent/.cache/pip' or its parent directory is not owned or is not writable by the current user. The cache has been disabled. Check the permissions and owner of that directory. If executing pip with sudo, you should use sudo's -H flag. Collecting git+https://github.com/akohlmey/sphinx-fortran@parallel-read (from -r /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/utils/requirements.txt (line 6)) Cloning https://github.com/akohlmey/sphinx-fortran (to revision parallel-read) to /tmp/pip-req-build-8w7zkel_ Running command git clone --filter=blob:none --quiet https://github.com/akohlmey/sphinx-fortran /tmp/pip-req-build-8w7zkel_ fatal: unable to access 'https://github.com/akohlmey/sphinx-fortran/': Failed to connect to github.com:443 over proxy 127.0.0.1 after 0 ms: Could not connect to server error: subprocess-exited-with-error × git clone --filter=blob:none --quiet https://github.com/akohlmey/sphinx-fortran /tmp/pip-req-build-8w7zkel_ did not run successfully. │ exit code: 128 ╰─> No available output. note: This error originates from a subprocess, and is likely not a problem with pip. ERROR: Failed to build 'git+https://github.com/akohlmey/sphinx-fortran@parallel-read' when git clone --filter=blob:none --quiet https://github.com/akohlmey/sphinx-fortran /tmp/pip-req-build-8w7zkel_ sed -e 's/@LAMMPS_SOURCE_DIR@/..\/..\/src/g' doxygen/Doxyfile.in > doxygen/Doxyfile Doxygen version used: 1.15.0 Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for plantuml files... Searching for files to exclude Searching INPUT for files to process... Reading and parsing tag files Parsing files Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/utils.cpp... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/utils.cpp... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/utils.h... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/utils.h... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/library.cpp... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/library.cpp... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/library.h... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/library.h... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/lammps.cpp... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/lammps.cpp... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/lammps.h... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/lammps.h... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/pointers.h... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/pointers.h... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/lmptype.h... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/lmptype.h... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/atom.cpp... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/atom.cpp... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/atom.h... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/atom.h... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/citeme.cpp... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/citeme.cpp... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/citeme.h... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/citeme.h... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/input.cpp... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/input.cpp... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/input.h... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/input.h... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/tokenizer.cpp... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/tokenizer.cpp... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/tokenizer.h... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/tokenizer.h... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/arg_info.cpp... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/arg_info.cpp... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/arg_info.h... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/arg_info.h... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/text_file_reader.cpp... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/text_file_reader.cpp... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/text_file_reader.h... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/text_file_reader.h... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/potential_file_reader.cpp... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/potential_file_reader.cpp... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/potential_file_reader.h... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/potential_file_reader.h... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/label_map.cpp... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/label_map.cpp... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/label_map.h... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/label_map.h... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/my_page.cpp... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/my_page.cpp... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/my_page.h... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/my_page.h... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/my_pool_chunk.cpp... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/my_pool_chunk.cpp... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/my_pool_chunk.h... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/my_pool_chunk.h... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/math_eigen.h... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/math_eigen.h... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/platform.h... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/platform.h... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/platform.cpp... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/platform.cpp... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/math_special.h... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/math_special.h... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/math_special.cpp... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/math_special.cpp... Reading /build/lammps-rlhK5n/lammps-20260704+dfsg/src/safe_pointers.h... Parsing file /build/lammps-rlhK5n/lammps-20260704+dfsg/src/safe_pointers.h... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Warn for undocumented namespaces... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file arg_info.h... Generating code for file atom.h... Generating code for file citeme.h... Generating code for file input.h... Generating code for file label_map.h... Generating code for file lammps.h... Generating code for file library.h... Generating code for file lmptype.h... Generating code for file math_eigen.h... Generating code for file math_special.h... Generating code for file my_page.h... Generating code for file my_pool_chunk.h... Generating code for file platform.h... Generating code for file pointers.h... Generating code for file potential_file_reader.h... Generating code for file safe_pointers.h... Generating code for file text_file_reader.h... Generating code for file tokenizer.h... Generating code for file utils.h... Generating file documentation... Generating page documentation... Generating group documentation... Generating class documentation... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating docs for namespace anonymous_namespace{citeme.cpp} Generating docs for namespace anonymous_namespace{label_map.cpp} Generating docs for namespace anonymous_namespace{library.cpp} Generating docs for namespace anonymous_namespace{platform.cpp} Generating docs for compound compress_info... Generating docs for namespace anonymous_namespace{utils.cpp} Generating docs for compound LAMMPS... Generating docs for compound MyPoolChunk< T >... Generating docs for compound MyPage< T >... Generating docs for compound Pointers... Generating docs for compound ubuf... Generating docs for compound multitype... Generating docs for compound Atom... Generating docs for compound CiteMe... Generating docs for compound Input... Generating docs for compound TokenizerException... Generating docs for compound InvalidIntegerException... Generating docs for compound InvalidFloatException... Generating docs for compound LabelMap... Generating docs for nested compound LabelMap::Lmap2Lmap... Generating docs for compound SafeFilePtr... Generating graph info page... Generating directory documentation... finalizing index lists... writing tag file... Generating XML output... Generating XML output for class LAMMPS_NS::ArgInfo Generating XML output for class LAMMPS_NS::Atom Generating XML output for class LAMMPS_NS::CiteMe Generating XML output for class anonymous_namespace{platform.cpp}::compress_info Generating XML output for class LAMMPS_NS::EOFException Generating XML output for class LAMMPS_NS::FileReaderException Generating XML output for class LAMMPS_NS::Atom::HashElem Generating XML output for class LAMMPS_NS::HyperOneCoeff Generating XML output for class LAMMPS_NS::Input Generating XML output for class LAMMPS_NS::InvalidFloatException Generating XML output for class LAMMPS_NS::InvalidIntegerException Generating XML output for class LAMMPS_NS::LabelMap Generating XML output for class LAMMPS_NS::LAMMPS Generating XML output for class LAMMPS_NS::LabelMap::Lmap2Lmap Generating XML output for class LAMMPS_NS::multitype Generating XML output for class LAMMPS_NS::MyPage Generating XML output for class LAMMPS_NS::MyPoolChunk Generating XML output for class anonymous_namespace{library.cpp}::NeighProxy Generating XML output for class LAMMPS_NS::package_styles_lists Generating XML output for class LAMMPS_NS::Atom::PerAtom Generating XML output for class LAMMPS_NS::Pointers Generating XML output for class LAMMPS_NS::PotentialFileReader Generating XML output for class anonymous_namespace{utils.cpp}::regex_context_t Generating XML output for class anonymous_namespace{utils.cpp}::regex_t Generating XML output for class LAMMPS_NS::SafeFilePtr Generating XML output for class LAMMPS_NS::TextFileReader Generating XML output for class LAMMPS_NS::Tokenizer Generating XML output for class LAMMPS_NS::TokenizerException Generating XML output for class LAMMPS_NS::ubuf Generating XML output for class udi_t Generating XML output for class LAMMPS_NS::ValueTokenizer Generating XML output for namespace anonymous_namespace{citeme.cpp} Generating XML output for namespace anonymous_namespace{label_map.cpp} Generating XML output for namespace anonymous_namespace{library.cpp} Generating XML output for namespace anonymous_namespace{platform.cpp} Generating XML output for namespace anonymous_namespace{utils.cpp} Generating XML output for namespace LAMMPS_NS Generating XML output for namespace LAMMPS_NS::MathSpecial Generating XML output for namespace LAMMPS_NS::platform Generating XML output for namespace LAMMPS_NS::utils Generating XML output for namespace MathConst Generating XML output for namespace MathEigen Generating XML output for namespace std Generating XML output for file arg_info.cpp Generating XML output for file arg_info.h Generating XML output for file atom.cpp Generating XML output for file atom.h Generating XML output for file citeme.cpp Generating XML output for file citeme.h Generating XML output for file input.cpp Generating XML output for file input.h Generating XML output for file label_map.cpp Generating XML output for file label_map.h Generating XML output for file lammps.cpp Generating XML output for file lammps.h Generating XML output for file library.cpp Generating XML output for file library.h Generating XML output for file lmptype.h Generating XML output for file math_eigen.h Generating XML output for file math_special.cpp Generating XML output for file math_special.h Generating XML output for file my_page.cpp Generating XML output for file my_page.h Generating XML output for file my_pool_chunk.cpp Generating XML output for file my_pool_chunk.h Generating XML output for file platform.cpp Generating XML output for file platform.h Generating XML output for file pointers.h Generating XML output for file potential_file_reader.cpp Generating XML output for file potential_file_reader.h Generating XML output for file safe_pointers.h Generating XML output for file text_file_reader.cpp Generating XML output for file text_file_reader.h Generating XML output for file tokenizer.cpp Generating XML output for file tokenizer.h Generating XML output for file utils.cpp Generating XML output for file utils.h Generate XML output for dir /build/lammps-rlhK5n/lammps-20260704+dfsg/src/ Running plantuml with JAVA... Running dot... type lookup cache used 713/262144 hits=6420 misses=991 symbol lookup cache used 7149/262144 hits=48881 misses=7149 finished... /usr/bin/python3 /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/utils/make-globbed-tocs.py -d /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src Overwriting file pairs.rst with new version Overwriting file bonds.rst with new version Overwriting file angles.rst with new version Overwriting file dihedrals.rst with new version Overwriting file impropers.rst with new version Overwriting file computes.rst with new version Overwriting file fixes.rst with new version sed -e 's,@DOXYGEN_XML_DIR@,/build/lammps-rlhK5n/lammps-20260704+dfsg/doc/doxygen/xml,g' \ -e 's,@LAMMPS_SOURCE_DIR@,/build/lammps-rlhK5n/lammps-20260704+dfsg/doc/../src,g' \ -e 's,@LAMMPS_PYTHON_DIR@,/build/lammps-rlhK5n/lammps-20260704+dfsg/doc/../python,g' \ -e 's,@LAMMPS_DOC_DIR@,/build/lammps-rlhK5n/lammps-20260704+dfsg/doc,g' /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/utils/sphinx-config/conf.py.in > /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/utils/sphinx-config/conf.py 'utils/sphinx-config/_themes/lammps_theme/local_search.html' -> 'utils/sphinx-config/_themes/lammps_theme/search.html' make[3]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/doc/graphviz' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/doc/graphviz' WARNING: unknown role name: f:func /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Classes_lammps.rst:4: ERROR: Unknown interpreted text role "f:func". [docutils] WARNING: unknown role name: f:mod /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1: ERROR: Unknown interpreted text role "f:mod". [docutils] WARNING: unknown role name: f:mod /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:4: ERROR: Unknown interpreted text role "f:mod". [docutils] WARNING: unknown role name: f:mod /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:43: ERROR: Unknown interpreted text role "f:mod". [docutils] WARNING: unknown role name: f:func /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:64: ERROR: Unknown interpreted text role "f:func". [docutils] WARNING: unknown role name: f:func /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:64: ERROR: Unknown interpreted text role "f:func". [docutils] WARNING: unknown role name: f:func /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:134: ERROR: Unknown interpreted text role "f:func". [docutils] WARNING: unknown role name: f:func /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:134: ERROR: Unknown interpreted text role "f:func". [docutils] WARNING: unknown role name: f:func /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:134: ERROR: Unknown interpreted text role "f:func". [docutils] WARNING: unknown role name: f:func /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:134: ERROR: Unknown interpreted text role "f:func". [docutils] WARNING: unknown role name: f:mod /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:255: ERROR: Unknown interpreted text role "f:mod". [docutils] WARNING: unknown directive name: f:module /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:258: ERROR: Unknown directive type "f:module". .. f:module:: LIBLAMMPS [docutils] WARNING: unknown role name: f:mod /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:260: ERROR: Unknown interpreted text role "f:mod". [docutils] WARNING: unknown directive name: f:currentmodule /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:263: ERROR: Unknown directive type "f:currentmodule". .. f:currentmodule:: None [docutils] WARNING: unknown directive name: f:type /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:265: ERROR: Unknown directive type "f:type". .. f:type:: lammps Derived type that is the general class of the Fortran interface. It holds a reference to the :cpp:class:`LAMMPS ` class instance to which any of the included calls are forwarded. :f handle: reference to the LAMMPS class :ftype handle: c_ptr :f style: derived type to access lammps style constants :ftype style: type(lammps_style) :f type: derived type to access lammps type constants :ftype type: type(lammps_type) :f dtype: derived type to access lammps data type constants :ftype dtype: type(lammps_dtype) :f close: :f:subr:`close` :ftype close: subroutine :f subroutine error: :f:subr:`error` :ftype error: subroutine :f file: :f:subr:`file` :ftype file: subroutine :f command: :f:subr:`command` :ftype command: subroutine :f commands_list: :f:subr:`commands_list` :ftype commands_list: subroutine :f commands_string: :f:subr:`commands_string` :ftype commands_string: subroutine :f get_natoms: :f:func:`get_natoms` :ftype get_natoms: function :f get_thermo: :f:func:`get_thermo` :ftype get_thermo: function :f last_thermo: :f:func:`last_thermo` :ftype last_thermo: function :f extract_box: :f:subr:`extract_box` :ftype extract_box: subroutine :f reset_box: :f:subr:`reset_box` :ftype reset_box: subroutine :f memory_usage: :f:subr:`memory_usage` :ftype memory_usage: subroutine :f get_mpi_comm: :f:func:`get_mpi_comm` :ftype get_mpi_comm: function :f extract_setting: :f:func:`extract_setting` :ftype extract_setting: function :f extract_global: :f:func:`extract_global` :ftype extract_global: function :f map_atom: :f:func:`map_atom` :ftype map_atom: function :f extract_atom: :f:func:`extract_atom` :ftype extract_atom: function :f extract_compute: :f:func:`extract_compute` :ftype extract_compute: function :f extract_fix: :f:func:`extract_fix` :ftype extract_fix: function :f extract_variable: :f:func:`extract_variable` :ftype extract_variable: function :f set_variable: :f:subr:`set_variable` :ftype set_variable: subroutine :f set_string_variable: :f:subr:`set_set_string_variable` :ftype set_string_variable: subroutine :f set_internal_variable: :f:subr:`set_internal_variable` :ftype set_internal_variable: subroutine :f eval: :f:func:`eval` :ftype eval: function :f clearstep_compute: :f:subr:`clearstep_compute` :ftype clearstep_compute: subroutine :f addstep_compute: :f:subr:`addstep_compute` :ftype addstep_compute: subroutine :f addstep_compute_all: :f:subr:`addstep_compute_all` :ftype addstep_compute_all: subroutine :f gather_atoms: :f:subr:`gather_atoms` :ftype gather_atoms: subroutine :f gather_atoms_concat: :f:subr:`gather_atoms_concat` :ftype gather_atoms_concat: subroutine :f gather_atoms_subset: :f:subr:`gather_atoms_subset` :ftype gather_atoms_subset: subroutine :f scatter_atoms: :f:subr:`scatter_atoms` :ftype scatter_atoms: subroutine :f scatter_atoms_subset: :f:subr:`scatter_atoms_subset` :ftype scatter_atoms_subset: subroutine :f gather_bonds: :f:subr:`gather_bonds` :ftype gather_bonds: subroutine :f gather_angles: :f:subr:`gather_angles` :ftype gather_angles: subroutine :f gather_dihedrals: :f:subr:`gather_dihedrals` :ftype gather_dihedrals: subroutine :f gather_impropers: :f:subr:`gather_impropers` :ftype gather_impropers: subroutine :f gather: :f:subr:`gather` :ftype gather: subroutine :f gather_concat: :f:subr:`gather_concat` :ftype gather_concat: subroutine :f gather_subset: :f:subr:`gather_subset` :ftype gather_subset: subroutine :f scatter: :f:subr:`scatter` :ftype scatter: subroutine :f scatter_subset: :f:subr:`scatter_subset` :ftype scatter_subset: subroutine :f create_atoms: :f:subr:`create_atoms` :ftype create_atoms: subroutine :f find_pair_neighlist: :f:func:`find_pair_neighlist` :ftype find_pair_neighlist: function :f find_fix_neighlist: :f:func:`find_fix_neighlist` :ftype find_fix_neighlist: function :f find_compute_neighlist: :f:func:`find_compute_neighlist` :ftype find_compute_neighlist: function :f neighlist_num_elements: :f:func:`neighlist_num_elements` :ftype neighlist_num_elements: function :f neighlist_element_neighbors: :f:subr:`neighlist_element_neighbors` :ftype neighlist_element_neighbors: subroutine :f version: :f:func:`version` :ftype version: function :f get_os_info: :f:subr:`get_os_info` :ftype get_os_info: subroutine :f config_has_mpi_support: :f:func:`config_has_mpi_support` :ftype config_has_mpi_support: function :f config_has_omp_support: :f:func:`config_has_omp_support` :ftype config_has_omp_support: function :f config_has_gzip_support: :f:func:`config_has_gzip_support` :ftype config_has_gzip_support: function :f config_has_png_support: :f:func:`config_has_png_support` :ftype config_has_png_support: function :f config_has_jpeg_support: :f:func:`config_has_jpeg_support` :ftype config_has_jpeg_support: function :f config_has_ffmpeg_support: :f:func:`config_has_ffmpeg_support` :ftype config_has_ffmpeg_support: function :f config_has_exceptions: :f:func:`config_has_exceptions` :ftype config_has_exceptions: function :f config_has_package: :f:func:`config_has_package` :ftype config_has_package: function :f config_package_count: :f:func:`config_package_count` :ftype config_package_count: function :f config_package_name: :f:func:`config_package_name` :ftype config_package_name: function :f installed_packages: :f:subr:`installed_packages` :ftype installed_packages: subroutine :f config_accelerator: :f:func:`config_accelerator` :ftype config_accelerator: function :f has_gpu_device: :f:func:`has_gpu_device` :ftype has_gpu_device: function :f get_gpu_device_info: :f:subr:`get_gpu_device_info` :ftype get_gpu_device_info: subroutine :f has_style: :f:func:`has_style` :ftype has_style: function :f style_count: :f:func:`style_count` :ftype style_count: function :f style_name: :f:func:`style_name` :ftype style_name: function :f has_id: :f:func:`has_id` :ftype has_id: function :f id_count: :f:func:`id_count` :ftype id_count: function :f id_name: :f:subr:`id_name` :ftype id_name: subroutine :f plugin_count: :f:func:`plugin_count` :ftype plugin_count: function :f plugin_name: :f:subr:`plugin_name` :ftype plugin_count: subroutine :f encode_image_flags: :f:func:`encode_image_flags` :ftype encode_image_flags: function :f decode_image_flags: :f:subr:`decode_image_flags` :ftype decode_image_flags: subroutine :f set_fix_external_callback: :f:subr:`set_fix_external_callback` :ftype set_fix_external_callback: subroutine :f fix_external_get_force: :f:func:`fix_external_get_force` :ftype fix_external_get_force: function :f fix_external_set_energy_global: :f:subr:`fix_external_set_energy_global` :ftype fix_external_set_energy_global: subroutine :f fix_external_set_virial_global: :f:subr:`fix_external_set_virial_global` :ftype fix_external_set_virial_global: subroutine :f fix_external_set_energy_peratom: :f:subr:`fix_external_set_energy_peratom` :ftype fix_external_set_energy_peratom: subroutine :f fix_external_set_virial_peratom: :f:subr:`fix_external_set_virial_peratom` :ftype fix_external_set_virial_peratom: subroutine :f fix_external_set_vector_length: :f:subr:`fix_external_set_vector_length` :ftype fix_external_set_vector_length: subroutine :f fix_external_set_vector: :f:subr:`fix_external_set_vector` :ftype fix_external_set_vector: subroutine :f flush_buffers: :f:subr:`flush_buffers` :ftype flush_buffers: subroutine :f is_running: :f:func:`is_running` :ftype is_running: function :f force_timeout: :f:subr:`force_timeout` :ftype force_timeout: subroutine :f has_error: :f:func:`has_error` :ftype has_error: function :f get_last_error_message: :f:subr:`get_last_error_message` :ftype get_last_error_message: subroutine [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:454: ERROR: Unknown directive type "f:function". .. f:function:: lammps([args][,comm]) This is the constructor for the Fortran class and will forward the arguments to a call to either :cpp:func:`lammps_open_fortran` or :cpp:func:`lammps_open_no_mpi`. If the LAMMPS library has been compiled with MPI support, it will also initialize MPI, if it has not already been initialized before. The *args* argument with the list of command-line parameters is optional and so it the *comm* argument with the MPI communicator. If *comm* is not provided, ``MPI_COMM_WORLD`` is assumed. For more details please see the documentation of :cpp:func:`lammps_open`. :o args: arguments as list of strings :otype args: character(len=\*),dimension(:),optional :o comm: MPI communicator :otype comm: integer,optional :to: :cpp:func:`lammps_open_fortran` :to: :cpp:func:`lammps_open_no_mpi` :r lammps: an instance of the :f:type:`lammps` derived type .. note:: The :f:mod:`MPI_F08` module, which defines Fortran 2008 bindings for MPI, is not directly supported by this interface due to the complexities of supporting both the :f:mod:`MPI_F08` and :f:mod:`MPI` modules at the same time. However, you should be able to use the ``MPI_VAL`` member of the ``MPI_comm`` derived type to access the integer value of the communicator, such as in .. code-block:: fortran PROGRAM testmpi USE LIBLAMMPS USE MPI_F08 TYPE(lammps) :: lmp lmp = lammps(comm=MPI_COMM_SELF%MPI_VAL) END PROGRAM testmpi [docutils] WARNING: unknown directive name: f:type /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:493: ERROR: Unknown directive type "f:type". .. f:type:: lammps_style This derived type is there to provide a convenient interface for the style constants used with :f:func:`extract_compute`, :f:func:`extract_fix`, and :f:func:`extract_variable`. Assuming your LAMMPS instance is called ``lmp``, these constants will be ``lmp%style%global``, ``lmp%style%atom``, and ``lmp%style%local``. These values are identical to the values described in :cpp:enum:`_LMP_STYLE_CONST` for the C library interface. :f integer(c_int) global: used to request global data :f integer(c_int) atom: used to request per-atom data :f integer(c_int) local: used to request local data [docutils] WARNING: unknown directive name: f:type /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:506: ERROR: Unknown directive type "f:type". .. f:type:: lammps_type This derived type is there to provide a convenient interface for the type constants used with :f:func:`extract_compute`, :f:func:`extract_fix`, and :f:func:`extract_variable`. Assuming your LAMMPS instance is called ``lmp``, these constants will be ``lmp%type%scalar``, ``lmp%type%vector``, and ``lmp%type%array``. These values are identical to the values described in :cpp:enum:`_LMP_TYPE_CONST` for the C library interface. :f integer(c_int) scalar: used to request scalars :f integer(c_int) vector: used to request vectors :f integer(c_int) array: used to request arrays (matrices) [docutils] WARNING: unknown role name: f:type /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:519: ERROR: Unknown interpreted text role "f:type". [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:522: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: close([finalize]) This method will close down the LAMMPS instance through calling :cpp:func:`lammps_close`. If the *finalize* argument is present and has a value of ``.TRUE.``, then this subroutine also calls :cpp:func:`lammps_kokkos_finalize`, :cpp:func:`lammps_mpi_finalize`, :cpp:func:`lammps_python_finalize`, and :cpp:func:`lammps_plugin_finalize`. :o finalize: shut down the MPI environment of the LAMMPS library if ``.TRUE.``. :otype finalize: logical,optional :to: :cpp:func:`lammps_close` :to: :cpp:func:`lammps_mpi_finalize` :to: :cpp:func:`lammps_kokkos_finalize` :to: :cpp:func:`lammps_python_finalize` :to: :cpp:func:`lammps_plugin_finalize` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:541: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: error(error_type, error_text) This method is a wrapper around the :cpp:func:`lammps_error` function and will dispatch an error through the LAMMPS Error class. .. versionadded:: 3Nov2022 :p error_type: constant to select which Error class function to call :ptype error_type: integer(c_int) :p character(len=\*) error_text: error message :to: :cpp:func:`lammps_error` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:555: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: file(filename) This method will call :cpp:func:`lammps_file` to have LAMMPS read and process commands from a file. :p character(len=\*) filename: name of file with LAMMPS commands :to: :cpp:func:`lammps_file` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:565: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: command(cmd) This method will call :cpp:func:`lammps_command` to have LAMMPS execute a single command. :p character(len=\*) cmd: single LAMMPS command :to: :cpp:func:`lammps_command` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:575: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: commands_list(cmds) This method will call :cpp:func:`lammps_commands_list` to have LAMMPS execute a list of input lines. :p character(len=\*) cmd [dimension(:)]: list of LAMMPS input lines :to: :cpp:func:`lammps_commands_list` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:585: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: commands_string(str) This method will call :cpp:func:`lammps_commands_string` to have LAMMPS execute a block of commands from a string. :p character(len=\*) str: LAMMPS input in string :to: :cpp:func:`lammps_commands_string` [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:595: ERROR: Unknown directive type "f:function". .. f:function:: get_natoms() This function will call :cpp:func:`lammps_get_natoms` and return the number of atoms in the system. :to: :cpp:func:`lammps_get_natoms` :r real(c_double) natoms: number of atoms .. note:: If you would prefer to get the number of atoms in its native format (i.e., as a 32- or 64-bit integer, depending on how LAMMPS was compiled), this can be extracted with :f:func:`extract_global`. [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:611: ERROR: Unknown directive type "f:function". .. f:function:: get_thermo(name) This function will call :cpp:func:`lammps_get_thermo` and return the value of the corresponding thermodynamic keyword. .. versionadded:: 3Nov2022 :p character(len=\*) name: string with the name of the thermo keyword :to: :cpp:func:`lammps_get_thermo` :r value [real(c_double)]: value of the requested thermo property or `0.0_c_double` [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:624: ERROR: Unknown directive type "f:function". .. f:function:: last_thermo(what, index) This function will call :cpp:func:`lammps_last_thermo` and returns either a string or a pointer to a cached copy of LAMMPS last thermodynamic output, depending on the data requested through *what*. Note that *index* uses 1-based indexing to access thermo output columns. .. versionadded:: 15Jun2023 Note that this function actually does not return a value, but rather associates the pointer on the left side of the assignment to point to internal LAMMPS data (with the exception of string data, which are copied and returned as ordinary Fortran strings). Pointers must be of the correct data type to point to said data (typically ``INTEGER(c_int)``, ``INTEGER(c_int64_t)``, or ``REAL(c_double)``). The pointer being associated with LAMMPS data is type-checked at run-time via an overloaded assignment operator. The pointers returned by this function point to temporary, read-only data that may be overwritten at any time, so their target values need to be copied to local storage if they are supposed to persist. For example, .. code-block:: fortran PROGRAM thermo USE LIBLAMMPS USE, INTRINSIC :: ISO_C_BINDING, ONLY : c_double, c_int64_t, c_int TYPE(lammps) :: lmp INTEGER(KIND=c_int64_t), POINTER :: ntimestep, bval REAL(KIND=c_double), POINTER :: dval INTEGER(KIND=c_int), POINTER :: nfield, typ, ival INTEGER(KIND=c_int) :: i CHARACTER(LEN=11) :: key lmp = lammps() CALL lmp%file('in.sysinit') ntimestep = lmp%last_thermo('step', 0) nfield = lmp%last_thermo('num', 0) PRINT*, 'Last thermo output on step: ', ntimestep, ' Number of fields: ', nfield DO i=1, nfield key = lmp%last_thermo('keyword',i) typ = lmp%last_thermo('type',i) IF (typ == lmp%dtype%i32) THEN ival = lmp%last_thermo('data',i) PRINT*, key, ':', ival ELSE IF (typ == lmp%dtype%i64) THEN bval = lmp%last_thermo('data',i) PRINT*, key, ':', bval ELSE IF (typ == lmp%dtype%r64) THEN dval = lmp%last_thermo('data',i) PRINT*, key, ':', dval END IF END DO CALL lmp%close(.TRUE.) END PROGRAM thermo would extract the last timestep where thermo output was done and the number of columns it printed. Then it loops over the columns to print out column header keywords and the corresponding data. .. note:: If :f:func:`last_thermo` returns a string, the string must have a length greater than or equal to the length of the string (not including the terminal ``NULL`` character) that LAMMPS returns. If the variable's length is too short, the string will be truncated. As usual in Fortran, strings are padded with spaces at the end. If you use an allocatable string, the string **must be allocated** prior to calling this function. :p character(len=\*) what: string with the name of the thermo keyword :p integer(c_int) index: 1-based column index :to: :cpp:func:`lammps_last_thermo` :r pointer [polymorphic]: pointer to LAMMPS data. The left-hand side of the assignment should be either a string (if expecting string data) or a C-compatible pointer (e.g., ``INTEGER(c_int), POINTER :: nlocal``) to the extracted property. .. warning:: Modifying the data in the location pointed to by the returned pointer may lead to inconsistent internal data and thus may cause failures, crashes, or bogus simulations. In general, it is much better to use a LAMMPS input command that sets or changes these parameters. Using an input command will take care of all side effects and necessary updates of settings derived from such settings. [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:714: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: extract_box([boxlo][, boxhi][, xy][, yz][, xz][, pflags][, boxflag]) This subroutine will call :cpp:func:`lammps_extract_box`. All parameters are optional, though obviously at least one should be present. The parameters *pflags* and *boxflag* are stored in LAMMPS as integers, but should be declared as ``LOGICAL`` variables when calling from Fortran. .. versionadded:: 3Nov2022 :o real(c_double) boxlo [dimension(3),optional]: vector in which to store lower-bounds of simulation box :o real(c_double) boxhi [dimension(3),optional]: vector in which to store upper-bounds of simulation box :o real(c_double) xy [optional]: variable in which to store *xy* tilt factor :o real(c_double) yz [optional]: variable in which to store *yz* tilt factor :o real(c_double) xz [optional]: variable in which to store *xz* tilt factor :o pflags: vector in which to store periodicity flags (``.TRUE.`` means periodic in that dimension) :otype pflags: logical,dimension(3),optional :o boxflag: variable in which to store boolean denoting whether the box will change during a simulation (``.TRUE.`` means box will change) :otype boxflag: logical,optional :to: :cpp:func:`lammps_extract_box` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:756: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: reset_box(boxlo, boxhi, xy, yz, xz) This subroutine will call :cpp:func:`lammps_reset_box`. All parameters are required. .. versionadded:: 3Nov2022 :p real(c_double) boxlo [dimension(3)]: vector of three doubles containing the lower box boundary :p real(c_double) boxhi [dimension(3)]: vector of three doubles containing the upper box boundary :p real(c_double) xy: *x--y* tilt factor :p real(c_double) yz: *y--z* tilt factor :p real(c_double) xz: *x--z* tilt factor :to: :cpp:func:`lammps_reset_box` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:774: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: memory_usage(meminfo) This subroutine will call :cpp:func:`lammps_memory_usage` and store the result in the three-element array *meminfo*. .. versionadded:: 3Nov2022 :p real(c_double) meminfo [dimension(3)]: vector of three doubles in which to store memory usage data :to: :cpp:func:`lammps_memory_usage` [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:787: ERROR: Unknown directive type "f:function". .. f:function:: get_mpi_comm() This function returns a Fortran representation of the LAMMPS "world" communicator. .. versionadded:: 3Nov2022 :to: :cpp:func:`lammps_get_mpi_comm` :r comm: Fortran integer equivalent to the MPI communicator LAMMPS is using :rtype comm: integer .. note:: The C library interface currently returns type ``int`` instead of type ``MPI_Fint``, which is the C type corresponding to Fortran ``INTEGER`` types of the default kind. On most compilers, these are the same anyway, but this interface exchanges values this way to avoid warning messages. .. note:: The :f:mod:`MPI_F08` module, which defines Fortran 2008 bindings for MPI, is not directly supported by this function. However, you should be able to convert between the two using the `MPI_VAL` member of the communicator. For example, .. code-block:: fortran USE MPI_F08 USE LIBLAMMPS TYPE(lammps) :: lmp TYPE(MPI_Comm) :: comm ! ... [commands to set up LAMMPS/etc.] comm%MPI_VAL = lmp%get_mpi_comm() should assign an :f:mod:`MPI_F08` communicator properly. [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:827: ERROR: Unknown directive type "f:function". .. f:function:: extract_setting(keyword) Query LAMMPS about global settings. See the documentation for the :cpp:func:`lammps_extract_setting` function from the C library. .. versionadded:: 3Nov2022 :p character(len=\*) keyword: string containing the name of the thermo keyword :to: :cpp:func:`lammps_extract_setting` :r integer(c_int) setting: value of the queried setting or :math:`-1` if unknown [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:841: ERROR: Unknown directive type "f:function". .. f:function:: extract_global(name) This function calls :cpp:func:`lammps_extract_global` and returns either a string or a pointer to internal global LAMMPS data, depending on the data requested through *name*. .. versionadded:: 3Nov2022 Note that this function actually does not return a value, but rather associates the pointer on the left side of the assignment to point to internal LAMMPS data (with the exception of string data, which are copied and returned as ordinary Fortran strings). Pointers must be of the correct data type to point to said data (typically ``INTEGER(c_int)``, ``INTEGER(c_int64_t)``, or ``REAL(c_double)``) and have compatible kind and rank. The pointer being associated with LAMMPS data is type-, kind-, and rank-checked at run-time via an overloaded assignment operator. The pointers returned by this function are generally persistent; therefore it is not necessary to call the function again unless a :doc:`clear` command has been issued, which wipes out and recreates the contents of the :cpp:class:`LAMMPS ` class. For example, .. code-block:: fortran PROGRAM demo USE, INTRINSIC :: ISO_C_BINDING, ONLY : c_int64_t, c_int, c_double USE LIBLAMMPS TYPE(lammps) :: lmp INTEGER(c_int), POINTER :: nlocal => NULL() INTEGER(c_int64_t), POINTER :: ntimestep => NULL() REAL(c_double), POINTER :: dt => NULL() CHARACTER(LEN=10) :: units lmp = lammps() ! other commands nlocal = lmp%extract_global('nlocal') ntimestep = lmp%extract_global('ntimestep') dt = lmp%extract_global('dt') units = lmp%extract_global('units') ! more commands lmp.close(.TRUE.) END PROGRAM demo would extract the number of atoms on this processor, the current time step, the size of the current time step, and the units being used into the variables *nlocal*, *ntimestep*, *dt*, and *units*, respectively. .. note:: If :f:func:`extract_global` returns a string, the string must have a length greater than or equal to the length of the string (not including the terminal ``NULL`` character) that LAMMPS returns. If the variable's length is too short, the string will be truncated. As usual in Fortran, strings are padded with spaces at the end. If you use an allocatable string, the string **must be allocated** prior to calling this function, but you can automatically reallocate it to the correct length after the function returns, viz., .. code-block :: fortran PROGRAM test USE LIBLAMMPS TYPE(lammps) :: lmp CHARACTER(LEN=:), ALLOCATABLE :: str lmp = lammps() CALL lmp%command('units metal') ALLOCATE(CHARACTER(LEN=80) :: str) str = lmp%extract_global('units') str = TRIM(str) ! re-allocates to length len_trim(str) here PRINT*, LEN(str), LEN_TRIM(str) END PROGRAM test will print the number 5 (the length of the word "metal") twice. :p character(len=\*) name: string with the name of the property to extract :to: :cpp:func:`lammps_extract_global` :r pointer [polymorphic]: pointer to LAMMPS data. The left-hand side of the assignment should be either a string (if expecting string data) or a C-compatible pointer (e.g., ``INTEGER(c_int), POINTER :: nlocal``) to the extracted property. If expecting vector data, the pointer should have dimension ":". .. warning:: Modifying the data in the location pointed to by the returned pointer may lead to inconsistent internal data and thus may cause failures, crashes, or bogus simulations. In general, it is much better to use a LAMMPS input command that sets or changes these parameters. Using an input command will take care of all side effects and necessary updates of settings derived from such settings. [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:936: ERROR: Unknown directive type "f:function". .. f:function:: extract_atom(name) This function calls :cpp:func:`lammps_extract_atom` and returns a pointer to LAMMPS data tied to the :cpp:class:`Atom` class, depending on the data requested through *name*. .. versionadded:: 3Nov2022 Note that this function actually does not return a pointer, but rather associates the pointer on the left side of the assignment to point to internal LAMMPS data. Pointers must be of the correct type, kind, and rank (e.g., ``INTEGER(c_int), DIMENSION(:)`` for "type", "mask", or "id"; ``INTEGER(c_int64_t), DIMENSION(:)`` for "id" if LAMMPS was compiled with the ``-DLAMMPS_BIGBIG`` flag; ``REAL(c_double), DIMENSION(:,:)`` for "x", "v", or "f"; and so forth). The pointer being associated with LAMMPS data is type-, kind-, and rank-checked at run-time. :p character(len=\*) name: string with the name of the property to extract :to: :cpp:func:`lammps_extract_atom` :r pointer: pointer to LAMMPS data. The left-hand side of the assignment should be a C-interoperable pointer of appropriate kind and rank (e.g., ``INTEGER(c_int), POINTER :: mask(:)``) to the extracted property. If expecting vector data, the pointer should have dimension ":"; if expecting matrix data, the pointer should have dimension ":,:". :rtype pointer: polymorphic .. warning:: Pointers returned by this function are generally not persistent, as per-atom data may be redistributed, reallocated, and reordered at every re-neighboring operation. It is advisable to re-bind pointers using :f:func:`extract_atom` between runs. .. admonition:: Array index order :class: tip Two-dimensional arrays returned from :f:func:`extract_atom` will be **transposed** from equivalent arrays in C, and they will be indexed from 1 instead of 0. For example, in C, .. code-block:: c void *lmp; double **x; /* more code to setup, etc. */ x = lammps_extract_atom(lmp, "x"); printf("%f\n", x[5][1]); will print the *y*-coordinate of the sixth atom on this processor. Conversely, .. code-block:: fortran TYPE(lammps) :: lmp REAL(c_double), DIMENSION(:,:), POINTER :: x => NULL() ! more code to setup, etc. x = lmp%extract_atom("x") PRINT '(f0.6)', x(2,6) will print the *y*-coordinate of the sixth atom on this processor (note the transposition of the two indices). This is not a choice, but rather a consequence of the different conventions adopted by the Fortran and C standards decades ago: in C, the block of data .. parsed-literal:: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 interpreted as a :math:`4\times4` matrix would be .. math:: \begin{bmatrix} 1 & 2 & 3 & 4 \\ 5 & 6 & 7 & 8 \\ 9 & 10 & 11 & 12 \\ 13 & 14 & 15 & 16 \end{bmatrix}, that is, in row-major order. In Fortran, the same block of data is interpreted in column-major order, namely, .. math:: \begin{bmatrix} 1 & 5 & 9 & 13 \\ 2 & 6 & 10 & 14 \\ 3 & 7 & 11 & 15 \\ 4 & 8 & 12 & 16 \end{bmatrix}. This difference in interpretation of the same block of data by the two languages means, in effect, that matrices from C or C++ will be transposed when interpreted in Fortran. .. note:: If you would like the indices to start at 0 instead of 1 (which follows typical notation in C and C++, but not Fortran), you can create another pointer and associate it thus: .. code-block:: fortran REAL(c_double), DIMENSION(:,:), POINTER :: x, x0 x = lmp%extract_atom("x") x0(0:,0:) => x The above would cause the dimensions of *x* to be (1:3, 1:nmax) and those of *x0* to be (0:2, 0:nmax\ :math:`-`\ 1). [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1048: ERROR: Unknown directive type "f:function". .. f:function:: extract_compute(id, style, type) This function calls :cpp:func:`lammps_extract_compute` and returns a pointer to LAMMPS data tied to the :cpp:class:`Compute` class, specifically data provided by the compute identified by *id*. Computes may provide global, per-atom, or local data, and those data may be a scalar, a vector, or an array. Since computes may provide multiple kinds of data, the user is required to specify which set of data is to be returned through the *style* and *type* variables. .. versionadded:: 3Nov2022 Note that this function actually does not return a value, but rather associates the pointer on the left side of the assignment to point to internal LAMMPS data. Pointers must be of the correct data type to point to said data (i.e., ``REAL(c_double)``) and have compatible rank. The pointer being associated with LAMMPS data is type-, kind-, and rank-checked at run-time via an overloaded assignment operator. For example, .. code-block:: fortran TYPE(lammps) :: lmp REAL(c_double), DIMENSION(:), POINTER :: COM ! code to setup, create atoms, etc. CALL lmp%command('compute COM all com') COM = lmp%extract_compute('COM', lmp%style%global, lmp%style%type) will bind the variable *COM* to the center of mass of the atoms created in your simulation. The vector in this case has length 3; the length (or, in the case of array data, the number of rows and columns) is determined for you based on data from the :cpp:class:`Compute` class. .. admonition:: Array index order :class: tip Two-dimensional arrays returned from :f:func:`extract_compute` will be **transposed** from equivalent arrays in C, and they will be indexed from 1 instead of 0. See the note at :f:func:`extract_atom` for further details. The following combinations are possible (assuming ``lmp`` is the name of your LAMMPS instance): .. list-table:: :header-rows: 1 :widths: 21 20 40 19 * - Style - Type - Type to assign to - Returned data * - ``lmp%style%global`` - ``lmp%type%scalar`` - ``REAL(c_double), POINTER`` - Global scalar * - ``lmp%style%global`` - ``lmp%type%vector`` - ``REAL(c_double), DIMENSION(:), POINTER`` - Global vector * - ``lmp%style%global`` - ``lmp%type%array`` - ``REAL(c_double), DIMENSION(:,:), POINTER`` - Global array * - ``lmp%style%atom`` - ``lmp%type%vector`` - ``REAL(c_double), DIMENSION(:), POINTER`` - Per-atom vector * - ``lmp%style%atom`` - ``lmp%type%array`` - ``REAL(c_double), DIMENSION(:,:), POINTER`` - Per-atom array * - ``lmp%style%local`` - ``lmp%type%vector`` - ``REAL(c_double), DIMENSION(:), POINTER`` - Local vector * - ``lmp%style%local`` - ``lmp%type%array`` - ``REAL(c_double), DIMENSION(:,:), POINTER`` - Local array :p character(len=\*) id: compute ID from which to extract data :p integer(c_int) style: value indicating the style of data to extract (global, per-atom, or local) :p integer(c_int) type: value indicating the type of data to extract (scalar, vector, or array) :to: :cpp:func:`lammps_extract_compute` :r pointer: pointer to LAMMPS data. The left-hand side of the assignment should be a C-compatible pointer (e.g., ``REAL(c_double), POINTER :: x``) to the extracted property. If expecting vector data, the pointer should have dimension ":"; if expecting array (matrix) data, the pointer should have dimension ":,:". :rtype pointer: polymorphic .. note:: If the compute's data are not already computed for the current step, the compute will be invoked. LAMMPS cannot easily check at that time if it is valid to invoke a compute, so it may fail with an error. The caller has to check to avoid such an error. .. warning:: The pointers returned by this function are generally not persistent, since the computed data may be re-distributed, re-allocated, and re-ordered at every invocation. It is advisable to re-invoke this function before the data are accessed or make a copy if the data are to be used after other LAMMPS commands have been issued. Do **not** modify the data returned by this function. [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1161: ERROR: Unknown directive type "f:function". .. f:function:: extract_fix(id, style, type[, nrow][, ncol]) This function calls :cpp:func:`lammps_extract_fix` and returns a pointer to LAMMPS data tied to the :cpp:class:`Fix` class, specifically data provided by the fix identified by *id*. Fixes may provide global, per-atom, or local data, and those data may be a scalar, a vector, or an array. Since many fixes provide multiple kinds of data, the user is required to specify which set of data is to be returned through the *style* and *type* variables. .. versionadded:: 3Nov2022 Global data are calculated at the time they are requested and are only available element-by-element. As such, the user is expected to provide the *nrow* variable to specify which element of a global vector or the *nrow* and *ncol* variables to specify which element of a global array the user wishes LAMMPS to return. The *ncol* variable is optional for global scalar or vector data, and both *nrow* and *ncol* are optional when a global scalar is requested, as well as when per-atom or local data are requested. The following combinations are possible (assuming ``lmp`` is the name of your LAMMPS instance): .. list-table:: :header-rows: 1 :widths: 20 19 11 11 21 18 * - Style - Type - nrow - ncol - Type to assign to - Returned data * - ``lmp%style%global`` - ``lmp%type%scalar`` - Ignored - Ignored - ``REAL(c_double)`` - Global scalar * - ``lmp%style%global`` - ``lmp%type%vector`` - Required - Ignored - ``REAL(c_double)`` - Element of global vector * - ``lmp%style%global`` - ``lmp%type%array`` - Required - Required - ``REAL(c_double)`` - Element of global array * - ``lmp%style%atom`` - ``lmp%type%scalar`` - - - - (not allowed) * - ``lmp%style%atom`` - ``lmp%type%vector`` - Ignored - Ignored - ``REAL(c_double), DIMENSION(:), POINTER`` - Per-atom vector * - ``lmp%style%atom`` - ``lmp%type%array`` - Ignored - Ignored - ``REAL(c_double), DIMENSION(:,:), POINTER`` - Per-atom array * - ``lmp%style%local`` - ``lmp%type%scalar`` - - - - (not allowed) * - ``lmp%style%local`` - ``lmp%type%vector`` - Ignored - Ignored - ``REAL(c_double), DIMENSION(:), POINTER`` - Per-atom vector * - ``lmp%style%local`` - ``lmp%type%array`` - Ignored - Ignored - ``REAL(c_double), DIMENSION(:,:), POINTER`` - Per-atom array In the case of global data, this function returns a value of type ``REAL(c_double)``. For per-atom or local data, this function does not return a value but instead associates the pointer on the left side of the assignment to point to internal LAMMPS data. Pointers must be of the correct type and kind to point to said data (i.e., ``REAL(c_double)``) and have compatible rank. The pointer being associated with LAMMPS data is type-, kind-, and rank-checked at run-time via an overloaded assignment operator. For example, .. code-block:: fortran TYPE(lammps) :: lmp REAL(c_double) :: dr, dx, dy, dz ! more code to set up, etc. lmp%command('fix george all recenter 2 2 2') ! more code dr = lmp%extract_fix("george", lmp%style%global, lmp%style%scalar) dx = lmp%extract_fix("george", lmp%style%global, lmp%style%vector, 1) dy = lmp%extract_fix("george", lmp%style%global, lmp%style%vector, 2) dz = lmp%extract_fix("george", lmp%style%global, lmp%style%vector, 3) will extract the global scalar calculated by :doc:`fix recenter ` into the variable *dr* and the three elements of the global vector calculated by fix recenter into the variables *dx*, *dy*, and *dz*, respectively. If asked for per-atom or local data, :f:func:`extract_fix` returns a pointer to actual LAMMPS data. The pointer returned will have the appropriate size to match the internal data, and will be type/kind/rank-checked at the time of the assignment. For example, .. code-block:: fortran TYPE(lammps) :: lmp REAL(c_double), DIMENSION(:), POINTER :: r ! more code to set up, etc. lmp%command('fix state all store/state 0 x y z') ! more code r = lmp%extract_fix('state', lmp%style%atom, lmp%type%array) will bind the pointer *r* to internal LAMMPS data representing the per-atom array computed by :doc:`fix store/state ` when three inputs are specified. Similarly, .. code-block:: fortran TYPE(lammps) :: lmp REAL(c_double), DIMENSION(:), POINTER :: x ! more code to set up, etc. lmp%command('fix state all store/state 0 x') ! more code x = lmp%extract_fix('state', lmp%style%atom, lmp%type%vector) will associate the pointer *x* with internal LAMMPS data corresponding to the per-atom vector computed by :doc:`fix store/state ` when only one input is specified. Similar examples with ``lmp%style%atom`` replaced by ``lmp%style%local`` will extract local data from fixes that define local vectors and/or arrays. .. warning:: The pointers returned by this function for per-atom or local data are generally not persistent, since the computed data may be redistributed, reallocated, and reordered at every invocation of the fix. It is thus advisable to re-invoke this function before the data are accessed or to make a copy if the data are to be used after other LAMMPS commands have been issued. .. note:: LAMMPS cannot easily check if it is valid to access the data, so it may fail with an error. The caller has to avoid such an error. :p character(len=\*) id: string with the name of the fix from which to extract data :p integer(c_int) style: value indicating the style of data to extract (global, per-atom, or local) :p integer(c_int) type: value indicating the type of data to extract (scalar, vector, or array) :p integer(c_int) nrow: row index (used only for global vectors and arrays) :p integer(c_int) ncol: column index (only used for global arrays) :to: :cpp:func:`lammps_extract_fix` :r data: LAMMPS data (for global data) or a pointer to LAMMPS data (for per-atom or local data). The left-hand side of the assignment should be of type ``REAL(c_double)`` and have appropriate rank (i.e., ``DIMENSION(:)`` if expecting per-atom or local vector data and ``DIMENSION(:,:)`` if expecting per-atom or local array data). If expecting local or per-atom data, it should have the ``POINTER`` attribute, but if expecting global data, it should be an ordinary (non-``POINTER``) variable. :rtype data: polymorphic .. admonition:: Array index order :class: tip Two-dimensional global, per-atom, or local array data from :f:func:`extract_fix` will be **transposed** from equivalent arrays in C (or in the ordinary LAMMPS interface accessed through thermodynamic output), and they will be indexed from 1, not 0. This is true even for global data, which are returned as scalars---this is done primarily so the interface is consistent, as there is no choice but to transpose the indices for per-atom or local array data. See the similar note under :f:func:`extract_atom` for further details. [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1355: ERROR: Unknown directive type "f:function". .. f:function:: extract_variable(name[,group]) This function calls :cpp:func:`lammps_extract_variable` and returns a scalar, vector, or string containing the value of the variable identified by *name*. When the variable is an *equal*-style variable (or one compatible with that style such as *internal*), the variable is evaluated and the corresponding value returned. When the variable is an *atom*-style variable, the variable is evaluated and a vector of values is returned. With all other variables, a string is returned. The *group* argument is only used for *atom* style variables and is ignored otherwise. If *group* is absent for *atom*-style variables, the group is assumed to be "all". .. versionadded:: 3Nov2022 This function returns the values of the variables, not pointers to them. Vectors pointing to *atom*-style variables should be of type ``REAL(c_double)``, be of rank 1 (i.e., ``DIMENSION(:)``), and have the ``ALLOCATABLE`` attribute. .. note:: Unlike the C library interface, the Fortran interface does not require you to deallocate memory when you are through; this is done for you, behind the scenes. For example, .. code-block:: fortran TYPE(lammps) :: lmp REAL(c_double) :: area ! more code to set up, etc. lmp%command('variable A equal lx*ly') ! more code area = lmp%extract_variable("A") will extract the *x*\ --*y* cross-sectional area of the simulation into the variable *area*. :p character(len=\*) name: variable name to evaluate :o character(len=\*) group [optional]: group for which to extract per-atom data (if absent, use "all") :to: :cpp:func:`lammps_extract_variable` :r data: scalar of type ``REAL(c_double)`` (for *equal*-style variables and others that are *equal*-compatible), vector of type ``REAL(c_double), DIMENSION(:), ALLOCATABLE`` for *atom*- or *vector*-style variables, or ``CHARACTER(LEN=*)`` for *string*-style and compatible variables. Strings whose length is too short to hold the result will be truncated. Allocatable strings must be allocated before this function is called; see note at :f:func:`extract_global` regarding allocatable strings. Allocatable arrays (for *atom*- and *vector*-style data) will be reallocated on assignment. :rtype data: polymorphic [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1419: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: set_variable(name, str) Set the value of a string-style variable. .. deprecated:: 7Feb2024 This function assigns a new value from the string *str* to the string-style variable *name*\ . If *name* does not exist or is not a string-style variable, an error is generated. .. warning:: This subroutine is deprecated and :f:subr:`set_string_variable` should be used instead. :p character(len=*) name: name of the variable :p character(len=*) str: new value to assign to the variable :to: :cpp:func:`lammps_set_variable` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1440: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: set_string_variable(name, str) Set the value of a string-style variable. .. versionadded:: 7Feb2024 This function assigns a new value from the string *str* to the string-style variable *name*\ . If *name* does not exist or is not a string-style variable, an error is generated. :p character(len=*) name: name of the variable :p character(len=*) str: new value to assign to the variable :to: :cpp:func:`lammps_set_string_variable` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1456: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: set_internal_variable(name, val) Set the value of a internal-style variable. .. versionadded:: 7Feb2024 This function assigns a new value from the floating-point number *val* to the internal-style variable *name*\ . If *name* does not exist or is not an internal-style variable, an error is generated. :p character(len=*) name: name of the variable :p real(c_double) val: new value to assign to the variable :to: :cpp:func:`lammps_set_internal_variable` [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1472: ERROR: Unknown directive type "f:function". .. f:function:: eval(expr) This function is a wrapper around :cpp:func:`lammps_eval` that takes a LAMMPS equal style variable string, evaluates it and returns the resulting scalar value as a floating-point number. .. versionadded:: 4Feb2025 :p character(len=\*) expr: string to be evaluated :to: :cpp:func:`lammps_eval` :r value [real(c_double)]: result of the evaluated string [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1486: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: clearstep_compute() Clear whether a compute has been invoked .. versionadded:: 4Feb2025 :to: :cpp:func:`lammps_clearstep_compute` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1496: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: addstep_compute(nextstep) Add timestep to list of future compute invocations if the compute has been invoked on the current timestep .. versionadded:: 4Feb2025 overloaded for 32-bit and 64-bit integer arguments :p integer(kind=8 or kind=4) nextstep: next timestep :to: :cpp:func:`lammps_addstep_compute` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1510: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: addstep_compute_all(nextstep) Add timestep to list of future compute invocations .. versionadded:: 4Feb2025 overloaded for 32-bit and 64-bit integer arguments :p integer(kind=8 or kind=4) nextstep: next timestep :to: :cpp:func:`lammps_addstep_compute_all` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1523: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: gather_atoms(name, count, data) This function calls :cpp:func:`lammps_gather_atoms` to gather the named atom-based entity for all atoms on all processors and return it in the vector *data*. The vector *data* will be ordered by atom ID, which requires consecutive atom IDs (1 to *natoms*). .. versionadded:: 3Nov2022 If you need a similar array but have non-consecutive atom IDs, see :f:func:`gather_atoms_concat`; for a similar array but for a subset of atoms, see :f:func:`gather_atoms_subset`. The *data* array will be ordered in groups of *count* values, sorted by atom ID (e.g., if *name* is *x* and *count* = 3, then *data* = [*x*\ (1,1), *x*\ (2,1), *x*\ (3,1), *x*\ (1,2), *x*\ (2,2), *x*\ (3,2), *x*\ (1,3), :math:`\dots`]); *data* must be ``ALLOCATABLE`` and will be allocated to length (*count* :math:`\times` *natoms*), as queried by :f:func:`get_natoms`. This function is not compatible with ``-DLAMMPS_BIGBIG``. :p character(len=\*) name: desired quantity (e.g., *x* or *mask*) :p integer(c_int) count: number of per-atom values you expect per atom (e.g., 1 for *type*, *mask*, or *charge*; 3 for *x*, *v*, or *f*). Use *count* = 3 with *image* if you want a single image flag unpacked into *x*/*y*/*z* components. :p data: array into which to store the data. Array *must* have the ``ALLOCATABLE`` attribute and be of rank 1 (i.e., ``DIMENSION(:)``). If this array is already allocated, it will be reallocated to fit the length of the incoming data. It should have type ``INTEGER(c_int)`` if expecting integer data and ``REAL(c_double)`` if expecting floating-point data. :ptype data: polymorphic,dimension(:),allocatable :to: :cpp:func:`lammps_gather_atoms` .. note:: If you want data from this function to be accessible as a two-dimensional array, you can declare a rank-2 pointer and reassign it, like so: .. code-block:: fortran USE, INTRINSIC :: ISO_C_BINDING USE LIBLAMMPS TYPE(lammps) :: lmp REAL(c_double), DIMENSION(:), ALLOCATABLE, TARGET :: xdata REAL(c_double), DIMENSION(:,:), POINTER :: x ! other code to set up, etc. CALL lmp%gather_atoms('x',3,xdata) x(1:3,1:size(xdata)/3) => xdata You can then access the *y*\ -component of atom 3 with ``x(2,3)``. See the note about array index order at :f:func:`extract_atom`. [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1580: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: gather_atoms_concat(name, count, data) This function calls :cpp:func:`lammps_gather_atoms_concat` to gather the named atom-based entity for all atoms on all processors and return it in the vector *data*. .. versionadded:: 3Nov2022 The vector *data* will not be ordered by atom ID, and there is no restriction on the IDs being consecutive. If you need the IDs, you can do another :f:func:`gather_atoms_concat` with *name* set to ``id``. If you need a similar array but have consecutive atom IDs, see :f:func:`gather_atoms`; for a similar array but for a subset of atoms, see :f:func:`gather_atoms_subset`. This function is not compatible with ``-DLAMMPS_BIGBIG``. :p character(len=\*) name: desired quantity (e.g., *x* or *mask*) :p integer(c_int) count: number of per-atom values you expect per atom (e.g., 1 for *type*, *mask*, or *charge*; 3 for *x*, *v*, or *f*). Use *count* = 3 with *image* if you want a single image flag unpacked into *x*/*y*/*z* components. :p data: array into which to store the data. Array *must* have the ``ALLOCATABLE`` attribute and be of rank 1 (i.e., ``DIMENSION(:)``). If this array is already allocated, it will be reallocated to fit the length of the incoming data. It should have type ``INTEGER(c_int)`` if expecting integer data and ``REAL(c_double)`` if expecting floating-point data. :ptype data: polymorphic,dimension(:),allocatable :to: :cpp:func:`lammps_gather_atoms_concat` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1614: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: gather_atoms_subset(name, count, ids, data) This function calls :cpp:func:`lammps_gather_atoms_subset` to gather the named atom-based entity for the atoms in the array *ids* from all processors and return it in the vector *data*. .. versionadded:: 3Nov2022 This subroutine gathers data for the requested atom IDs and stores them in a one-dimensional allocatable array. The data will be ordered by atom ID, but there is no requirement that the IDs be consecutive. If you wish to return a similar array for *all* the atoms, use :f:func:`gather_atoms` or :f:func:`gather_atoms_concat`. The *data* array will be in groups of *count* values, sorted by atom ID in the same order as the array *ids* (e.g., if *name* is *x*, *count* = 3, and *ids* is [100, 57, 210], then *data* might look like [*x*\ (1,100), *x*\ (2,100), *x*\ (3,100), *x*\ (1,57), *x*\ (2,57), *x*\ (3,57), *x*\ (1,210), :math:`\dots`]; *ids* must be provided by the user, and *data* must be of rank 1 (i.e., ``DIMENSION(:)``) and have the ``ALLOCATABLE`` attribute. This function is not compatible with ``-DLAMMPS_BIGBIG``. :p character(len=\*) name: desired quantity (e.g., *x* or *mask*) :p integer(c_int) count: number of per-atom values you expect per atom (e.g., 1 for *type*, *mask*, or *charge*; 3 for *x*, *v*, or *f*). Use *count* = 3 with *image* if you want a single image flag unpacked into *x*/*y*/*z* components. :p integer(c_int) ids [dimension(:)]: atom IDs corresponding to the atoms to be gathered :p data: array into which to store the data. Array *must* have the ``ALLOCATABLE`` attribute and be of rank 1 (i.e., ``DIMENSION(:)``). If this array is already allocated, it will be reallocated to fit the length of the incoming data. It should have type ``INTEGER(c_int)`` if expecting integer data and ``REAL(c_double)`` if expecting floating-point data. :ptype data: polymorphic,dimension(:),allocatable :to: :cpp:func:`lammps_gather_atoms_subset` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1656: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: scatter_atoms(name, data) This function calls :cpp:func:`lammps_scatter_atoms` to scatter the named atom-based entities in *data* to all processors. .. versionadded:: 3Nov2022 This subroutine takes data stored in a one-dimensional array supplied by the user and scatters them to all atoms on all processors. The data must be ordered by atom ID, with the requirement that the IDs be consecutive. Use :f:func:`scatter_atoms_subset` to scatter data for some (or all) atoms, in any order. The *data* array needs to be ordered in groups of *count* values, sorted by atom ID (e.g., if *name* is *x* and *count* = 3, then *data* = [*x*\ (1,1), *x*\ (2,1), *x*\ (3,1), *x*\ (1,2), *x*\ (2,2), *x*\ (3,2), *x*\ (1,3), :math:`\dots`]); *data* must be of length *natoms* or 3\*\ *natoms*. :p character(len=\*) name: quantity to be scattered (e.g., *x* or *charge*) :p data: per-atom values packed in a one-dimensional array containing the data to be scattered. This array must have length *natoms* (e.g., for *type* or *charge*) or length *natoms*\ :math:`{}\times 3` (e.g., for *x* or *f*). The array *data* must be rank 1 (i.e., ``DIMENSION(:)``) and be of type ``INTEGER(c_int)`` (e.g., for *mask* or *type*) or of type ``REAL(c_double)`` (e.g., for *x* or *charge* or *f*). :ptype data: polymorphic,dimension(:) :to: :cpp:func:`lammps_scatter_atoms` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1687: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: scatter_atoms_subset(name, ids, data) This function calls :cpp:func:`lammps_scatter_atoms_subset` to scatter the named atom-based entities in *data* to all processors. .. versionadded:: 3Nov2022 This subroutine takes data stored in a one-dimensional array supplied by the user and scatters them to a subset of atoms on all processors. The array *data* contains data associated with atom IDs, but there is no requirement that the IDs be consecutive, as they are provided in a separate array, *ids*. Use :f:func:`scatter_atoms` to scatter data for all atoms, in order. The *data* array needs to be organized in groups of 1 or 3 values, depending on which quantity is being scattered, with the groups in the same order as the array *ids*. For example, if you want *data* to be the array [*x*\ (1,1), *x*\ (2,1), *x*\ (3,1), *x*\ (1,100), *x*\ (2,100), *x*\ (3,100), *x*\ (1,57), *x*\ (2,57), *x*\ (3,57)], then *ids* would be [1, 100, 57] and *name* would be *x*. :p character(len=\*) name: quantity to be scattered (e.g., *x* or *charge*) :p integer(c_int) ids [dimension(:)]: atom IDs corresponding to the atoms being scattered :p data: per-atom values packed into a one-dimensional array containing the data to be scattered. This array must have either the same length as *ids* (for *mask*, *type*, etc.) or three times its length (for *x*, *f*, etc.); the array must be rank 1 and be of type ``INTEGER(c_int)`` (e.g., for *mask* or *type*) or of type ``REAL(c_double)`` (e.g., for *charge*, *x*, or *f*). :ptype data: polymorphic,dimension(:) :to: :cpp:func:`lammps_scatter_atoms_subset` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1721: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: gather_bonds(data) Gather type and constituent atom information for all bonds. .. versionadded:: 3Nov2022 This function copies the list of all bonds into an allocatable array. The array will be filled with (bond type, bond atom 1, bond atom 2) for each bond. The array is allocated to the right length (i.e., three times the number of bonds). The array *data* must be of the same type as the LAMMPS ``tagint`` type, which is equivalent to either ``INTEGER(c_int)`` or ``INTEGER(c_int64_t)``, depending on whether ``-DLAMMPS_BIGBIG`` was used when LAMMPS was built. If the supplied array does not match, an error will result at run-time. An example of how to use this routine is below: .. code-block:: fortran PROGRAM bonds USE, INTRINSIC :: ISO_C_BINDING, ONLY : c_int USE, INTRINSIC :: ISO_FORTRAN_ENV, ONLY : OUTPUT_UNIT USE LIBLAMMPS IMPLICIT NONE INTEGER(c_int), DIMENSION(:), ALLOCATABLE, TARGET :: bonds INTEGER(c_int), DIMENSION(:,:), POINTER :: bonds_array TYPE(lammps) :: lmp INTEGER :: i ! other commands to initialize LAMMPS, create bonds, etc. CALL lmp%gather_bonds(bonds) bonds_array(1:3, 1:SIZE(bonds)/3) => bonds DO i = 1, SIZE(bonds)/3 WRITE(OUTPUT_UNIT,'(A,1X,I4,A,I4,1X,I4)') 'bond', bonds_array(1,i), & '; type = ', bonds_array(2,i), bonds_array(3,i) END DO END PROGRAM bonds :p data: array into which to copy the result. \*The ``KIND`` parameter is either ``c_int`` or, if LAMMPS was compiled with ``-DLAMMPS_BIGBIG``, kind ``c_int64_t``. :ptype data: integer(kind=\*),allocatable :to: :cpp:func:`lammps_gather_bonds` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1766: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: gather_angles(data) Gather type and constituent atom information for all angles. .. versionadded:: 8Feb2023 This function copies the list of all angles into an allocatable array. The array will be filled with (angle type, angle atom 1, angle atom 2, angle atom 3) for each angle. The array is allocated to the right length (i.e., four times the number of angles). The array *data* must be of the same type as the LAMMPS ``tagint`` type, which is equivalent to either ``INTEGER(c_int)`` or ``INTEGER(c_int64_t)``, depending on whether ``-DLAMMPS_BIGBIG`` was used when LAMMPS was built. If the supplied array does not match, an error will result at run-time. An example of how to use this routine is below: .. code-block:: fortran PROGRAM angles USE, INTRINSIC :: ISO_C_BINDING, ONLY : c_int USE, INTRINSIC :: ISO_FORTRAN_ENV, ONLY : OUTPUT_UNIT USE LIBLAMMPS IMPLICIT NONE INTEGER(c_int), DIMENSION(:), ALLOCATABLE, TARGET :: angles INTEGER(c_int), DIMENSION(:,:), POINTER :: angles_array TYPE(lammps) :: lmp INTEGER :: i ! other commands to initialize LAMMPS, create angles, etc. CALL lmp%gather_angles(angles) angles_array(1:4, 1:SIZE(angles)/4) => angles DO i = 1, SIZE(angles)/4 WRITE(OUTPUT_UNIT,'(A,1X,I4,A,I4,1X,I4,1X,I4)') 'angle', angles_array(1,i), & '; type = ', angles_array(2,i), angles_array(3,i), angles_array(4,i) END DO END PROGRAM angles :p data: array into which to copy the result. \*The ``KIND`` parameter is either ``c_int`` or, if LAMMPS was compiled with ``-DLAMMPS_BIGBIG``, kind ``c_int64_t``. :ptype data: integer(kind=\*),allocatable :to: :cpp:func:`lammps_gather_angles` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1811: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: gather(self, name, count, data) Gather the named per-atom, per-atom fix, per-atom compute, or fix property/atom-based entities from all processes, in order by atom ID. .. versionadded:: 22Dec2022 This subroutine gathers data from all processes and stores them in a one-dimensional allocatable array. The array *data* will be ordered by atom ID, which requires consecutive IDs (1 to *natoms*\ ). If you need a similar array but for non-consecutive atom IDs, see :cpp:func:`lammps_gather_concat`; for a similar array but for a subset of atoms, see :cpp:func:`lammps_gather_subset`. The *data* array will be ordered in groups of *count* values, sorted by atom ID (e.g., if *name* is *x*, then *data* is [x(1,1), x(2,1), x(3,1), x(1,2), x(2,2), x(3,2), x(1,3), :math:`\dots`]); *data* must be ``ALLOCATABLE`` and will be allocated to length (*count*\ :math:`{}\times{}`\ *natoms*), as queried by :f:func:`get_natoms`. This function will return an error if fix or compute data are requested and the fix or compute ID given does not have per-atom data. See the note about re-interpreting the vector as a matrix at :f:subr:`gather_atoms`. This function is not compatible with ``-DLAMMPS_BIGBIG``. :p character(len=\*) name: desired quantity (e.g., "x" or "mask" for atom properties, "f_id" for per-atom fix data, "c_id" for per-atom compute data, "d_name" or "i_name" for fix property/atom vectors with *count* = 1, "d2_name" or "i2_name" for fix property/atom vectors with *count*\ :math:`{}> 1`) :p integer(c_int) count: number of per-atom values (e.g., 1 for *type* or *charge*, 3 for *x* or *f*); use *count* = 3 with *image* if you want the image flags unpacked into (*x*,\ *y*,\ *z*) components. :p real(c_double) data [dimension(:),allocatable]: array into which to store the data. Array *must* have the ``ALLOCATABLE`` attribute and be of rank 1 (i.e., ``DIMENSION(:)``). If this array is already allocated, it will be reallocated to fit the length of the incoming data. :to: :cpp:func:`lammps_gather` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1853: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: gather_dihedrals(data) Gather type and constituent atom information for all dihedrals. .. versionadded:: 8Feb2023 This function copies the list of all dihedrals into an allocatable array. The array will be filled with (dihedral type, dihedral atom 1, dihedral atom 2, dihedral atom 3, dihedral atom 4) for each dihedral. The array is allocated to the right length (i.e., five times the number of dihedrals). The array *data* must be of the same type as the LAMMPS ``tagint`` type, which is equivalent to either ``INTEGER(c_int)`` or ``INTEGER(c_int64_t)``, depending on whether ``-DLAMMPS_BIGBIG`` was used when LAMMPS was built. If the supplied array does not match, an error will result at run-time. An example of how to use this routine is below: .. code-block:: fortran PROGRAM dihedrals USE, INTRINSIC :: ISO_C_BINDING, ONLY : c_int USE, INTRINSIC :: ISO_FORTRAN_ENV, ONLY : OUTPUT_UNIT USE LIBLAMMPS IMPLICIT NONE INTEGER(c_int), DIMENSION(:), ALLOCATABLE, TARGET :: dihedrals INTEGER(c_int), DIMENSION(:,:), POINTER :: dihedrals_array TYPE(lammps) :: lmp INTEGER :: i ! other commands to initialize LAMMPS, create dihedrals, etc. CALL lmp%gather_dihedrals(dihedrals) dihedrals_array(1:5, 1:SIZE(dihedrals)/5) => dihedrals DO i = 1, SIZE(dihedrals)/5 WRITE(OUTPUT_UNIT,'(A,1X,I4,A,I4,1X,I4,1X,I4,1X,I4)') 'dihedral', dihedrals_array(1,i), & '; type = ', dihedrals_array(2,i), dihedrals_array(3,i), dihedrals_array(4,i), dihedrals_array(5,i) END DO END PROGRAM dihedrals :p data: array into which to copy the result. \*The ``KIND`` parameter is either ``c_int`` or, if LAMMPS was compiled with ``-DLAMMPS_BIGBIG``, kind ``c_int64_t``. :ptype data: integer(kind=\*),allocatable :to: :cpp:func:`lammps_gather_dihedrals` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1899: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: gather_impropers(data) Gather type and constituent atom information for all impropers. .. versionadded:: 8Feb2023 This function copies the list of all impropers into an allocatable array. The array will be filled with (improper type, improper atom 1, improper atom 2, improper atom 3, improper atom 4) for each improper. The array is allocated to the right length (i.e., five times the number of impropers). The array *data* must be of the same type as the LAMMPS ``tagint`` type, which is equivalent to either ``INTEGER(c_int)`` or ``INTEGER(c_int64_t)``, depending on whether ``-DLAMMPS_BIGBIG`` was used when LAMMPS was built. If the supplied array does not match, an error will result at run-time. An example of how to use this routine is below: .. code-block:: fortran PROGRAM impropers USE, INTRINSIC :: ISO_C_BINDING, ONLY : c_int USE, INTRINSIC :: ISO_FORTRAN_ENV, ONLY : OUTPUT_UNIT USE LIBLAMMPS IMPLICIT NONE INTEGER(c_int), DIMENSION(:), ALLOCATABLE, TARGET :: impropers INTEGER(c_int), DIMENSION(:,:), POINTER :: impropers_array TYPE(lammps) :: lmp INTEGER :: i ! other commands to initialize LAMMPS, create impropers, etc. CALL lmp%gather_impropers(impropers) impropers_array(1:5, 1:SIZE(impropers)/5) => impropers DO i = 1, SIZE(impropers)/5 WRITE(OUTPUT_UNIT,'(A,1X,I4,A,I4,1X,I4,1X,I4,1X,I4)') 'improper', impropers_array(1,i), & '; type = ', impropers_array(2,i), impropers_array(3,i), impropers_array(4,i), impropers_array(5,i) END DO END PROGRAM impropers :p data: array into which to copy the result. \*The ``KIND`` parameter is either ``c_int`` or, if LAMMPS was compiled with ``-DLAMMPS_BIGBIG``, kind ``c_int64_t``. :ptype data: integer(kind=\*),allocatable :to: :cpp:func:`lammps_gather_impropers` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1945: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: gather_concat(self, name, count, data) Gather the named per-atom, per-atom fix, per-atom compute, or fix property/atom-based entities from all processes, unordered. .. versionadded:: 22Dec2022 This subroutine gathers data for all atoms and stores them in a one-dimensional allocatable array. The data will be a concatenation of chunks from each processor's owned atoms, in whatever order the atoms are in on each processor. This process has no requirement that the atom IDs be consecutive. If you need the ID of each atom, you can do another call to either :f:subr:`gather_atoms_concat` or :f:subr:`gather_concat` with *name* set to ``id``. If you have consecutive IDs and want the data to be in order, use :f:subr:`gather`; for a similar array but for a subset of atoms, use :f:subr:`gather_subset`. The *data* array will be in groups of *count* values, with *natoms* groups total, but not in order by atom ID (e.g., if *name* is *x* and *count* is 3, then *data* might be something like [x(1,11), x(2,11), x(3,11), x(1,3), x(2,3), x(3,3), x(1,5), :math:`\dots`]); *data* must be ``ALLOCATABLE`` and will be allocated to length (*count* :math:`\times` *natoms*), as queried by :f:func:`get_natoms`. This function is not compatible with ``-DLAMMPS_BIGBIG``. :p character(len=\*) name: desired quantity (e.g., "x" or "mask" for atom properties, "f_id" for per-atom fix data, "c_id" for per-atom compute data, "d_name" or "i_name" for fix property/atom vectors with *count* = 1, "d2_name" or "i2_name" for fix property/atom vectors with *count*\ :math:`{}> 1`) :p integer(c_int) count: number of per-atom values you expect per atom (e.g., 1 for *type*, *mask*, or *charge*; 3 for *x*, *v*, or *f*). Use *count* = 3 with *image* if you want a single image flag unpacked into *x*/*y*/*z* components. :p data: array into which to store the data. Array *must* have the ``ALLOCATABLE`` attribute and be of rank 1 (i.e., ``DIMENSION(:)``). If this array is already allocated, it will be reallocated to fit the length of the incoming data. It should have type ``INTEGER(c_int)`` if expecting integer data and ``REAL(c_double)`` if expecting floating-point data. :ptype data: polymorphic,dimension(:),allocatable :to: :cpp:func:`lammps_gather_concat` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:1991: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: gather_subset(name, count, ids, data) Gather the named per-atom, per-atom fix, per-atom compute, or fix property/atom-based entities from all processes for a subset of atoms. .. versionadded:: 22Dec2022 This subroutine gathers data for the requested atom IDs and stores them in a one-dimensional allocatable array. The data will be ordered by atom ID, but there is no requirement that the IDs be consecutive. If you wish to return a similar array for *all* the atoms, use :f:subr:`gather` or :f:subr:`gather_concat`. The *data* array will be in groups of *count* values, sorted by atom ID in the same order as the array *ids* (e.g., if *name* is *x*, *count* = 3, and *ids* is [100, 57, 210], then *data* might look like [*x*\ (1,100), *x*\ (2,100), *x*\ (3,100), *x*\ (1,57), *x*\ (2,57), *x*\ (3,57), *x*\ (1,210), :math:`\dots`]); *ids* must be provided by the user, and *data* must have the ``ALLOCATABLE`` attribute and be of rank 1 (i.e., ``DIMENSION(:)``). If *data* is already allocated, it will be reallocated to fit the length of the incoming data. This function is not compatible with ``-DLAMMPS_BIGBIG``. :p character(len=\*) name: quantity to be scattered :p integer(c_int) ids [dimension(:)]: atom IDs corresponding to the atoms being scattered (e.g., "x" or "f" for atom properties, "f_id" for per-atom fix data, "c_id" for per-atom compute data, "d_name" or "i_name" for fix property/atom vectors with *count* = 1, "d2_name" or "i2_name" for fix property/atom vectors with *count*\ :math:`{} > 1`) :p integer(c_int) count: number of per-atom values you expect per atom (e.g., 1 for *type*, *mask*, or *charge*; 3 for *x*, *v*, or *f*). Use *count* = 3 with *image* if you want a single image flag unpacked into *x*/*y*/*z* components. :p data: per-atom values packed into a one-dimensional array containing the data to be scattered. This array must have the ``ALLOCATABLE`` attribute and will be allocated either to the same length as *ids* (for *mask*, *type*, etc.) or to three times its length (for *x*, *f*, etc.); the array must be rank 1 and be of type ``INTEGER(c_int)`` (e.g., for *mask* or *type*) or of type ``REAL(c_double)`` (e.g., for *charge*, *x*, or *f*). :ptype data: polymorphic,dimension(:),allocatable :to: :cpp:func:`lammps_gather_subset` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2038: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: scatter(name, data) This function calls :cpp:func:`lammps_scatter` to scatter the named per-atom, per-atom fix, per-atom compute, or fix property/atom-based entity in *data* to all processes. .. versionadded:: 22Dec2022 This subroutine takes data stored in a one-dimensional array supplied by the user and scatters them to all atoms on all processes. The data must be ordered by atom ID, with the requirement that the IDs be consecutive. Use :f:subr:`scatter_subset` to scatter data for some (or all) atoms, unordered. The *data* array needs to be ordered in groups of *count* values, sorted by atom ID (e.g., if *name* is *x* and *count* = 3, then *data* = [*x*\ (1,1), *x*\ (2,1), *x*\ (3,1), *x*\ (1,2), *x*\ (2,2), *x*\ (3,2), *x*\ (1,3), :math:`\dots`]); *data* must be of length (*count* :math:`\times` *natoms*). This function is not compatible with ``-DLAMMPS_BIGBIG``. :p character(len=*) name: desired quantity (e.g., "x" or "f" for atom properties, "f_id" for per-atom fix data, "c_id" for per-atom compute data, "d_name" or "i_name" for fix property/atom vectors with *count* = 1, "d2_name" or "i2_name" for fix property/atom vectors with *count*\ :math:`{} > 1`) :p data: per-atom values packed in a one-dimensional array; *data* should be of type ``INTEGER(c_int)`` or ``REAL(c_double)``, depending on the type of data being scattered, and be of rank 1 (i.e., ``DIMENSION(:)``). :ptype data: polymorphic,dimension(:) :to: :cpp:func:`lammps_scatter` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2071: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: scatter_subset(name, ids, data) This function calls :cpp:func:`lammps_scatter_subset` to scatter the named per-atom, per-atom fix, per-atom compute, or fix property/atom-based entities in *data* from a subset of atoms to all processes. .. versionadded:: 22Dec2022 This subroutine takes data stored in a one-dimensional array supplied by the user and scatters them to a subset of atoms on all processes. The array *data* contains data associated with atom IDs, but there is no requirement that the IDs be consecutive, as they are provided in a separate array. Use :f:subr:`scatter` to scatter data for all atoms, in order. The *data* array needs to be organized in groups of *count* values, with the groups in the same order as the array *ids*. For example, if you want *data* to be the array [x(1,1), x(2,1), x(3,1), x(1,100), x(2,100), x(3,100), x(1,57), x(2,57), x(3,57)], then *count* = 3 and *ids* = [1, 100, 57]. This function is not compatible with ``-DLAMMPS_BIGBIG``. :p character(len=\*) name: desired quantity (e.g., "x" or "mask" for atom properties, "f_id" for per-atom fix data, "c_id" for per-atom compute data, "d_name" or "i_name" for fix property/atom vectors with *count* = 1, "d2_name" or "i2_name" for fix property/atom vectors with *count*\ :math:`{}> 1`) :p integer(c_int) ids: list of atom IDs to scatter data for :p polymorphic data [dimension(:)]: per-atom values packed in a one-dimensional array of length *size(ids)* \* *count*. :to: :cpp:func:`lammps_scatter_subset` [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2104: ERROR: Unknown directive type "f:function". .. f:function:: create_atoms([id,] type, x, [v,] [image,] [bexpand]) This method calls :cpp:func:`lammps_create_atoms` to create additional atoms from a given list of coordinates and a list of atom types. Additionally, the atom IDs, velocities, and image flags may be provided. .. versionadded:: 3Nov2022 :p integer(c_int) type [dimension(N)]: vector of :math:`N` atom types (required/see note below) :p real(c_double) x [dimension(3N)]: vector of :math:`3N\ x/y/z` positions of the new atoms, arranged as :math:`[x_1,y_1,z_1,x_2,y_2,\dotsc]` (required/see note below) :o integer(kind=\*) id [dimension(N),optional]: vector of :math:`N` atom IDs; if absent, LAMMPS will generate them for you. \*The ``KIND`` parameter should be ``c_int`` unless LAMMPS was compiled with ``-DLAMMPS_BIGBIG``, in which case it should be ``c_int64_t``. :o real(c_double) v [dimension(3N),optional]: vector of :math:`3N` *x*\ /*y*\ /*z* velocities of the new atoms, arranged as :math:`[v_{1,x},v_{1,y},v_{1,z},v_{2,x}, \dotsc]`; if absent, they will be set to zero :o integer(kind=\*) image [dimension(N),optional]: vector of :math:`N` image flags; if absent, they are set to zero. \*The ``KIND`` parameter should be ``c_int`` unless LAMMPS was compiled with ``-DLAMMPS_BIGBIG``, in which case it should be ``c_int64_t``. See note below. :o bexpand: if ``.TRUE.``, atoms outside of shrink-wrap boundaries will be created, not dropped, and the box dimensions will be extended. Default is ``.FALSE.`` :otype bexpand: logical,optional :r atoms: number of created atoms :rtype atoms: integer(c_int) :to: :cpp:func:`lammps_create_atoms` .. note:: The *type* and *x* arguments are required, but they are declared ``OPTIONAL`` in the module because making them mandatory would require *id* to be present as well. To have LAMMPS generate the ids for you, use a call something like .. code-block:: fortran lmp%create_atoms(type=new_types, x=new_xs) .. note:: When LAMMPS has been compiled with ``-DLAMMPS_BIGBIG``, it is not possible to include the *image* parameter but omit the *id* parameter. Either *id* must be present, or both *id* and *image* must be absent. This is required because having all arguments be optional in both generic functions creates an ambiguous interface. This limitation does not exist if LAMMPS was not compiled with ``-DLAMMPS_BIGBIG``. [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2159: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: create_molecule(id, jsonstr) Add molecule template from string with JSON data .. versionadded:: 22Jul2025 :p character(len=\*) id: desired molecule-ID :p character(len=\*) jsonstr: string with JSON data defining the molecule template :to: :cpp:func:`lammps_create_molecule` [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2171: ERROR: Unknown directive type "f:function". .. f:function:: find_pair_neighlist(style[, exact][, nsub][, reqid]) Find index of a neighbor list requested by a pair style. .. versionadded:: 3Nov2022 This function determines which of the available neighbor lists for pair styles matches the given conditions. It first matches the style name. If *exact* is ``.TRUE.``, the name must match exactly; if ``.FALSE.``, a regular expression or sub-string match is done. If the pair style is *hybrid* or *hybrid/overlay*, the style is matched against the sub-styles instead. If the same pair style is used multiple times as a sub-style, the *nsub* argument must be :math:`> 0`; this argument represents the *n*\ th instance of the sub-style (same as for the :doc:`pair_coeff ` command, for example). In that case, *nsub*\ :math:`{} = 0` will not produce a match, and the function will return :math:`-1`. The final condition to be checked is the request ID (\ *reqid*\ ). This will usually be zero, but some pair styles request multiple neighbor lists and set the request ID to a value greater than zero. :p character(len=\*) style: String used to search for pair style instance. :o exact: Flag to control whether style should match exactly or only a regular expression/sub-string match is applied. Default: ``.TRUE.``. :otype exact: logical,optional :o integer(c_int) nsub [optional]: Match *nsub*\ th hybrid sub-style instance of the same style. Default: 0. :o integer(c_int) reqid [optional]: Request ID to identify the neighbor list in case there are multiple requests from the same pair style instance. Default: 0. :to: :cpp:func:`lammps_find_pair_neighlist` :r integer(c_int) index: Neighbor list index if found, otherwise :math:`-1`. [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2207: ERROR: Unknown directive type "f:function". .. f:function:: find_fix_neighlist(id[, reqid]) Find index of a neighbor list requested by a fix. .. versionadded:: 3Nov2022 The neighbor list request from a fix is identified by the fix ID and the request ID. The request ID is typically zero, but will be :math:`>0` for fixes with multiple neighbor list requests. :p character(len=\*) id: Identifier of fix instance :o integer(c_int) reqid [optional]: request ID to identify the neighbor list in cases in which there are multiple requests from the same fix. Default: 0. :to: :cpp:func:`lammps_find_fix_neighlist` :r index: neighbor list index if found, otherwise :math:`-1` :rtype index: integer(c_int) [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2227: ERROR: Unknown directive type "f:function". .. f:function:: find_compute_neighlist(id[, reqid]) Find index of a neighbor list requested by a compute. .. versionadded:: 3Nov2022 The neighbor list request from a compute is identified by the compute ID and the request ID. The request ID is typically zero, but will be :math:`> 0` in case a compute has multiple neighbor list requests. :p character(len=\*) id: Identifier of compute instance. :o integer(c_int) reqid [optional]: request ID to identify the neighbor list in cases in which there are multiple requests from the same compute. Default: 0. :to: :cpp:func:`lammps_find_compute_neighlist` :r index: neighbor list index if found, otherwise :math:`-1`. :rtype index: integer(c_int) [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2247: ERROR: Unknown directive type "f:function". .. f:function:: neighlist_num_elements(idx) Return the number of entries in the neighbor list with the given index. .. versionadded:: 3Nov2022 :p integer(c_int) idx: neighbor list index :to: :cpp:func:`lammps_neighlist_num_elements` :r inum: number of entries in neighbor list, or :math:`-1` if *idx* is not a valid index. :rtype inum: integer(c_int) :to: :cpp:func:`lammps_neighlist_num_elements` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2262: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: neighlist_element_neighbors(idx, element, iatom, neighbors) Return atom local index, number of neighbors, and array of neighbor local atom indices of a neighbor list entry. .. versionadded:: 3Nov2022 :p integer(c_int) idx: index of this neighbor list in the list of all neighbor lists :p integer(c_int) element: index of this neighbor list entry :p integer(c_int) iatom: local atom index (i.e., in the range [1,nlocal+nghost]; -1 if invalid or element value :p integer(c_int) neighbors [dimension(:),pointer]: pointer to an array of neighboring atom local indices :to: :cpp:func:`lammps_neighlist_element_neighbors` [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2280: ERROR: Unknown directive type "f:function". .. f:function:: version() This method returns the numeric LAMMPS version like :cpp:func:`lammps_version` does. :to: :cpp:func:`lammps_version` :r version: LAMMPS version :rtype version: integer [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2291: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: get_os_info(buffer) This function can be used to retrieve detailed information about the hosting operating system and compiler/runtime environment. .. versionadded:: 3Nov2022 A suitable buffer has to be provided. The assembled text will be truncated so as not to overflow this buffer. The string is typically a few hundred bytes long. :p character(len=\*) buffer: string that will house the information. :to: :cpp:func:`lammps_get_os_info` [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2308: ERROR: Unknown directive type "f:function". .. f:function:: config_has_mpi_support() This function is used to query whether LAMMPS was compiled with a real MPI library or in serial. .. versionadded:: 3Nov2022 :to: :cpp:func:`lammps_config_has_mpi_support` :r has_mpi: ``.FALSE.`` when compiled with STUBS, ``.TRUE.`` if complied with MPI. :rtype has_mpi: logical [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2322: ERROR: Unknown directive type "f:function". .. f:function:: config_has_omp_support() This function is used to query whether LAMMPS was compiled with OpenMP enabled. .. versionadded:: 10Sep2025 :to: :cpp:func:`lammps_config_has_omp_support` :r has_omp: ``.TRUE.`` when compiled with OpenMP enabled, ``.FALSE.`` if not. :rtype has_omp: logical [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2334: ERROR: Unknown directive type "f:function". .. f:function:: config_has_gzip_support() Check if the LAMMPS library supports reading or writing compressed files via a pipe to gzip or similar compression programs. .. versionadded:: 3Nov2022 Several LAMMPS commands (e.g., :doc:`read_data`, :doc:`write_data`, :doc:`dump styles atom, custom, and xyz `) support reading and writing compressed files via creating a pipe to the ``gzip`` program. This function checks whether this feature was :ref:`enabled at compile time `. It does **not** check whether ``gzip`` or any other supported compression programs themselves are installed and usable. :to: :cpp:func:`lammps_config_has_gzip_support` :r has_gzip: :rtype has_gzip: logical [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2354: ERROR: Unknown directive type "f:function". .. f:function:: config_has_png_support() Check if the LAMMPS library supports writing PNG format images. .. versionadded:: 3Nov2022 The LAMMPS :doc:`dump style image ` supports writing multiple image file formats. Most of them, however, need support from an external library, and using that has to be :ref:`enabled at compile time `. This function checks whether support for the `PNG image file format `_ is available in the current LAMMPS library. :to: :cpp:func:`lammps_config_has_png_support` :r has_png: :rtype has_png: logical [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2373: ERROR: Unknown directive type "f:function". .. f:function:: config_has_jpeg_support() Check if the LAMMPS library supports writing JPEG format images. .. versionadded:: 3Nov2022 The LAMMPS :doc:`dump style image ` supports writing multiple image file formats. Most of them, however, need support from an external library, and using that has to be :ref:`enabled at compile time `. This function checks whether support for the `JPEG image file format `_ is available in the current LAMMPS library. :to: :cpp:func:`lammps_config_has_jpeg_support` :r has_jpeg: :rtype has_jpeg: logical [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2391: ERROR: Unknown directive type "f:function". .. f:function:: config_has_ffmpeg_support() Check if the LAMMPS library supports creating movie files via a pipe to ffmpeg. .. versionadded:: 3Nov2022 The LAMMPS :doc:`dump style movie ` supports generating movies from images on-the-fly via creating a pipe to the `ffmpeg `_ program. This function checks whether this feature was :ref:`enabled at compile time `. It does **not** check whether the ``ffmpeg`` itself is installed and usable. :to: :cpp:func:`lammps_config_has_ffmpeg_support` :r has_ffmpeg: :rtype has_ffmpeg: logical [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2411: ERROR: Unknown directive type "f:function". .. f:function:: config_has_exceptions() Check whether LAMMPS errors will throw C++ exceptions. .. versionadded:: 3Nov2022 When using the library interface, the library interface functions will "catch" exceptions, and then the error status can be checked by calling :f:func:`has_error`. The most recent error message can be retrieved via :f:func:`get_last_error_message`. This allows to restart a calculation or delete and recreate the LAMMPS instance when a C++ exception occurs. One application of using exceptions this way is `LAMMPS-GUI `_ :to: :cpp:func:`lammps_config_has_exceptions` :r has_exceptions: :rtype has_exceptions: logical [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2431: ERROR: Unknown directive type "f:function". .. f:function:: config_has_package(name) Check whether a specific package has been included in LAMMPS .. versionadded:: 3Nov2022 This function checks whether the LAMMPS library in use includes the specific :doc:`LAMMPS package ` provided as argument. :to: :cpp:func:`lammps_config_has_package` :r has_package: :rtype has_package: logical [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2446: ERROR: Unknown directive type "f:function". .. f:function:: config_package_count() Count the number of installed packages in the LAMMPS library. .. versionadded:: 3Nov2022 This function counts how many :doc:`LAMMPS packages ` are included in the LAMMPS library in use. It directly calls the C library function :cpp:func:`lammps_config_package_count`. :to: :cpp:func:`lammps_config_package_count` :r integer(c_int) npackages: number of packages installed [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2461: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: config_package_name(idx, buffer) Get the name of a package in the list of installed packages in the LAMMPS library. .. versionadded:: 3Nov2022 This subroutine copies the name of the package with the index *idx* into the provided string *buffer*. If the name of the package exceeds the length of the buffer, it will be truncated accordingly. If the index is out of range, *buffer* is set to an empty string. :p integer(c_int) idx: index of the package in the list of included packages :math:`(0 \le idx < \text{package count})` :p character(len=\*) buffer: string to hold the name of the package :to: :cpp:func:`lammps_config_package_name` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2480: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: installed_packages(package[, length]) Obtain a list of the names of enabled packages in the LAMMPS shared library and store it in *package*. .. versionadded:: 3Nov2022 This function is analogous to the :py:meth:`installed_packages ` function in the Python API. The optional argument *length* sets the length of each string in the vector *package* (default: 31). :p character(len=:) package [dimension(:),allocatable]: list of packages; *must* have the ``ALLOCATABLE`` attribute and be of rank 1 (i.e., ``DIMENSION(:)``) with allocatable length. :o length: length of each string in the list. Default: 31. :otype length: integer,optional :to: :cpp:func:`lammps_config_package_count` :to: :cpp:func:`lammps_config_package_name` [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2502: ERROR: Unknown directive type "f:function". .. f:function:: config_accelerator(package, category, setting) This function calls :cpp:func:`lammps_config_accelerator` to check the availability of compile time settings of included :doc:`accelerator packages ` in LAMMPS. .. versionadded:: 3Nov2022 Supported packages names are "GPU", "KOKKOS", "INTEL", and "OPENMP". Supported categories are "api" with possible settings "cuda", "hip", "phi", "pthreads", "opencl", "openmp", and "serial"; and "precision" with possible settings "double", "mixed", and "single". :p character(len=\*) package: string with the name of the accelerator package :p character(len=\*) category: string with the name of the setting :p character(len=\*) setting: string with the name of the specific setting :to: :cpp:func:`lammps_config_accelerator` :r available: ``.TRUE.`` if the combination of package, category, and setting is available, otherwise ``.FALSE.``. :rtype available: logical [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2527: ERROR: Unknown directive type "f:function". .. f:function:: has_gpu_device() Checks for the presence of a viable GPU package device. .. versionadded:: 3Nov2022 This function calls :cpp:func:`lammps_has_gpu_device`, which checks at runtime whether an accelerator device is present that can be used with the :doc:`GPU package `. More detailed information about the available device or devices can be obtained by calling the :f:subr:`get_gpu_device_info` subroutine. :to: :cpp:func:`lammps_has_gpu_device` :r available: ``.TRUE.`` if a viable device is available, ``.FALSE.`` if not. :rtype available: logical [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2547: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: get_gpu_device_info(buffer) Get GPU package device information. .. versionadded:: 3Nov2022 Calls :cpp:func:`lammps_get_gpu_device_info` to retrieve detailed information about any accelerator devices that are viable for use with the :doc:`GPU package `. It will fill *buffer* with a string that is equivalent to the output of the ``nvc_get_device`` or ``ocl_get_device`` or ``hip_get_device`` tools that are compiled alongside LAMMPS if the GPU package is enabled. A suitable-length Fortran string has to be provided. The assembled text will be truncated so as not to overflow this buffer. This string can be several kilobytes long if multiple devices are present. :p character(len=\*) buffer: string into which to copy the information. :to: :cpp:func:`lammps_get_gpu_device_info` [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2569: ERROR: Unknown directive type "f:function". .. f:function:: has_style(category, name) Check whether a specific style has been included in LAMMPS. .. versionadded:: 3Nov2022 This function calls :cpp:func:`lammps_has_style` to check whether the LAMMPS library in use includes the specific style *name* associated with a specific *category* provided as arguments. Please see :cpp:func:`lammps_has_style` for a list of valid categories. :p character(len=\*) category: category of the style :p character(len=\*) name: name of the style :to: :cpp:func:`lammps_has_style` :r has_style: ``.TRUE.`` if included, ``.FALSE.`` if not. :rtype has_style: logical [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2588: ERROR: Unknown directive type "f:function". .. f:function:: style_count(category) Count the number of styles of *category* in the LAMMPS library. .. versionadded:: 3Nov2022 This function counts how many styles in the provided *category* are included in the LAMMPS library currently in use. Please see :cpp:func:`lammps_has_style` for a list of valid categories. :p character(len=\*) category: category of styles to count :to: :cpp:func:`lammps_style_count` :r integer(c_int) count: number of styles in *category* [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2604: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: style_name(category, idx, buffer) Look up the name of a style by index in the list of styles of a given category in the LAMMPS library. .. versionadded:: 3Nov2022 This function calls :cpp:func:`lammps_style_name` and copies the name of the *category* style with index *idx* into the provided string *buffer*. The length of *buffer* must be long enough to contain the name of the style; if it is too short, the name will be truncated accordingly. If *idx* is out of range, *buffer* will be the empty string and a warning will be issued. :p character(len=\*) category: category of styles :p integer(c_int) idx: index of the style in the list of *category* styles :math:`(1 \leq idx \leq \text{style count})` :p character(len\*) buffer: string buffer to copy the name of the style into :to: :cpp:func:`lammps_style_name` [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2627: ERROR: Unknown directive type "f:function". .. f:function:: has_id(category, name) This function checks if the current LAMMPS instance a *category* ID of the given *name* exists. Valid categories are: *compute*\ , *dump*\ , *fix*\ , *group*\ , *molecule*\ , *region*\ , and *variable*\ . .. versionadded:: 3Nov2022 :p character(len=\*) category: category of the ID :p character(len=\*) name: name of the ID :to: :cpp:func:`lammps_has_id` :r has_id: ``.TRUE.`` if *category* style *name* exists, ``.FALSE.`` if not. :rtype has_id: logical [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2643: ERROR: Unknown directive type "f:function". .. f:function:: id_count(category) This function counts how many IDs in the provided *category* are defined in the current LAMMPS instance. Please see :f:func:`has_id` for a list of valid categories. .. versionadded:: 3Nov2022 :p character(len=\*) category: category of the ID :to: :cpp:func:`lammps_id_count` :r count: number of IDs in *category* :rtype count: integer(c_int) [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2658: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: id_name(category, idx, buffer) Look up the name of an ID by index in the list of IDs of a given category. .. versionadded:: 3Nov2022 This function copies the name of the *category* ID with the index *idx* into the provided string *buffer*\ . The length of the buffer must be long enough to hold the string; if the name of the style exceeds the length of the buffer, it will be truncated accordingly. If *buffer* is ``ALLOCATABLE``, it must be allocated *before* the function is called. If *idx* is out of range, *buffer* is set to an empty string and a warning is issued. :p character(len=\*) category: category of IDs :p integer(c_int) idx: index of the ID in the list of *category* styles (:math:`0 \leq idx < count`) :p character(len=\*) buffer: string into which to copy the name of the style :to: :cpp:func:`lammps_id_name` [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2681: ERROR: Unknown directive type "f:function". .. f:function:: plugin_count() This function counts the number of loaded plugins. .. versionadded:: 3Nov2022 :to: :cpp:func:`lammps_plugin_count` :r n: number of loaded plugins :rtype n: integer(c_int) [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2693: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: plugin_name(idx, stylebuf, namebuf) Look up the style and name of a plugin by its index in the list of plugins. .. versionadded:: 3Nov2022 This function copies the name of the *style* plugin with the index *idx* into the provided C-style string buffer. The length of the buffer must be provided as *buf_size* argument. If the name of the style exceeds the length of the buffer, it will be truncated accordingly. If the index is out of range, both strings are set to the empty string and a warning is printed. :p integer(c_int) idx: index of the plugin in the list all or *style* plugins :p character(len=\*) stylebuf: string into which to copy the style of the plugin :p character(len=\*) namebuf: string into which to copy the style of the plugin :to: :cpp:func:`lammps_plugin_name` [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2716: ERROR: Unknown directive type "f:function". .. f:function:: encode_image_flags(ix, iy, iz) Encodes three integer image flags into a single imageint. .. versionadded:: 3Nov2022 This function performs the bit-shift, addition, and bit-wise OR operations necessary to combine the values of three integers representing the image flags in the :math:`x`-, :math:`y`-, and :math:`z`-directions. Unless LAMMPS is compiled with ``-DLAMMPS_BIGBIG``, those integers are limited to 10-bit signed integers :math:`[-512,512)`. If ``-DLAMMPS_BIGBIG`` was used when compiling, then the return value is of kind ``c_int64_t`` instead of kind ``c_int``, and the valid range for the individual image flags becomes :math:`[-1048576,1048575)` (i.e., the range of a 21-bit signed integer). There is no check on whether the arguments conform to these requirements; values out of range will simply be wrapped back into the interval. :p integer(c_int) ix: image flag in :math:`x`-direction :p integer(c_int) iy: image flag in :math:`y`-direction :p integer(c_int) iz: image flag in :math:`z`-direction :r integer(kind=\*) imageint: encoded image flag. \*The ``KIND`` parameter is ``c_int`` unless LAMMPS was built with ``-DLAMMPS_BIGBIG``, in which case it is ``c_int64_t``. .. note:: The fact that the programmer does not know the ``KIND`` parameter of the return value until compile time means that it is impossible to define an interface that works for both sizes of ``imageint``. One side effect of this is that you must assign the return value of this function to a variable; it cannot be used as the argument to another function or as part of an array constructor. For example, .. code-block:: fortran my_images = [lmp%encode_image_flags(0,0,0), lmp%encode_image_flags(1,0,0)] will *not* work; instead, do something like .. code-block:: fortran my_images(1) = lmp%encode_image_flags(0,0,0) my_images(2) = lmp%encode_image_flags(1,0,0) [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2762: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: decode_image_flags(image, flags) This function does the reverse operation of :f:func:`encode_image_flags`: it takes the image flag and performs the bit-shift and bit-masking operations to decode it and stores the resulting three integers into the array *flags*. .. versionadded:: 3Nov2022 :p integer(kind=\*) image: encoded image flag. \*The ``KIND`` parameter is either ``c_int`` or, if LAMMPS was compiled with ``-DLAMMPS_BIGBIG``, ``c_int64_t``. Kind compatibility is checked at run-time. :p integer(c_int) flags [dimension(3)]: three-element vector where the decoded image flags will be stored. [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2779: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: set_fix_external_callback(id, callback, caller) Set the callback function for a :doc:`fix external ` instance with the given ID. .. versionadded:: 22Dec2022 Fix :doc:`external ` allows programs that are running LAMMPS through its library interface to modify certain LAMMPS properties on specific time steps, similar to the way other fixes do. This subroutine sets the callback function for use with the "pf/callback" mode. The function should have Fortran language bindings with the following interface, which depends on how LAMMPS was compiled: .. code-block:: fortran ABSTRACT INTERFACE SUBROUTINE external_callback(caller, timestep, ids, x, fexternal) USE, INTRINSIC :: ISO_C_BINDING, ONLY : c_int, c_double, c_int64_t CLASS(*), INTENT(INOUT) :: caller INTEGER(c_bigint), INTENT(IN) :: timestep INTEGER(c_tagint), DIMENSION(:), INTENT(IN) :: ids REAL(c_double), DIMENSION(:,:), INTENT(IN) :: x REAL(c_double), DIMENSION(:,:), INTENT(OUT) :: fexternal END SUBROUTINE external_callback END INTERFACE where ``c_bigint`` is ``c_int64_t`` and ``c_tagint`` is ``c_int64_t`` if ``-DLAMMPS_BIGBIG`` was used and ``c_int`` otherwise. The argument *caller* to :f:subr:`set_fix_external_callback` is unlimited polymorphic (i.e., it can be any Fortran object you want to pass to the calling function) and will be available as the first argument to the callback function. It can be your LAMMPS instance, which you might need if the callback function needs access to the library interface. The argument must be a scalar; to pass non-scalar data, wrap those data in a derived type and pass an instance of the derived type to *caller*. The array *ids* is an array of length *nlocal* (as accessed from the :cpp:class:`Atom` class or through :f:func:`extract_global`). The arrays *x* and *fexternal* are :math:`3 \times {}`\ *nlocal* arrays; these are transposed from what they would look like in C (see note about array index order at :f:func:`extract_atom`). The callback mechanism is one of two ways that forces can be applied to a simulation with the help of :doc:`fix external `. The alternative is *array* mode, where one calls :f:func:`fix_external_get_force`. Please see the documentation for :doc:`fix external ` for more information about how to use the fix and couple it with external programs. :p character(len=*) id: ID of :doc:`fix external ` instance :p callback: subroutine :doc:`fix external ` should call :ptype callback: external :p class(*) caller [optional]: object you wish to pass to the callback procedure (must be a scalar; see note) :to: :cpp:func:`lammps_set_fix_external_callback` .. note:: The interface for your callback function must match types precisely with the abstract interface block given above. **The compiler probably will not be able to check this for you.** In particular, the first argument ("caller") must be of type ``CLASS(*)`` or you will probably get a segmentation fault or at least a misinterpretation of whatever is in memory there. You can resolve the object using the ``SELECT TYPE`` construct. An example callback function (assuming LAMMPS was compiled with ``-DLAMMPS_SMALLBIG``) that applies something akin to Hooke's Law (with each atom having a different *k* value) is shown below. .. code-block:: fortran MODULE stuff USE, INTRINSIC :: ISO_C_BINDING, ONLY : c_int, c_double, c_int64_t USE, INTRINSIC :: ISO_FORTRAN_ENV, ONLY : error_unit IMPLICIT NONE TYPE shield REAL(c_double), DIMENSION(:,:), ALLOCATABLE :: k ! assume k gets allocated to dimension(3,nlocal) at some point ! and assigned values END TYPE shield SUBROUTINE my_callback(caller, timestep, ids, x, fexternal) CLASS(*), INTENT(INOUT) :: caller INTEGER(c_int), INTENT(IN) :: timestep INTEGER(c_int64_t), INTENT(IN) :: ids REAL(c_double), INTENT(IN) :: x(:,:) REAL(c_double), INTENT(OUT) :: fexternal(:,:) SELECT TYPE (caller) TYPE IS (shield) fexternal = - caller%k * x CLASS DEFAULT WRITE(error_unit,*) 'UH OH...' END SELECT END SUBROUTINE my_callback END MODULE stuff ! then, when assigning the callback function, do this: PROGRAM example USE LIBLAMMPS USE stuff TYPE(lammps) :: lmp TYPE(shield) :: my_shield lmp = lammps() CALL lmp%command('fix ext all external pf/callback 1 1') CALL lmp%set_fix_external_callback('ext', my_callback, my_shield) END PROGRAM example [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2894: ERROR: Unknown directive type "f:function". .. f:function:: fix_external_get_force(id) Get pointer to the force array storage in a fix external instance with the given ID. .. versionadded:: 22Dec2022 Fix :doc:`external ` allows programs that are running LAMMPS through its library interfaces to add or modify certain LAMMPS properties on specific time steps, similar to the way other fixes do. This function provides access to the per-atom force storage in a fix external instance with the given fix-ID to be added to the individual atoms when using the "pf/array" mode. The *fexternal* array can be accessed like other "native" per-atom arrays accessible via the :f:func:`extract_atom` function. Please note that the array stores the forces for *local* atoms for each MPI rank, in the order determined by the neighbor list build. Because the underlying data structures can change as well as the order of atom as they migrate between MPI processes because of the domain decomposition parallelization, this function should be always called immediately before the forces are going to be set to get an up-to-date pointer. You can use, for example, :f:func:`extract_setting` to obtain the number of local atoms `nlocal` and then assume the dimensions of the returned force array as ``REAL(c_double) :: force(3,nlocal)``. This function is an alternative to the callback mechanism in fix external set up by :f:subr:`set_fix_external_callback`. The main difference is that this mechanism can be used when forces are to be pre-computed and the control alternates between LAMMPS and the external driver, while the callback mechanism can call an external subroutine to compute the force when the fix is triggered and needs them. Please see the documentation for :doc:`fix external ` for more information about how to use the fix and how to couple it with an external program. :p character(len=*) id: ID of :doc:`fix external ` instance :to: :cpp:func:`lammps_fix_external_get_force` :r fexternal: pointer to the per-atom force array allocated by the fix :rtype fexternal: real(c_double),dimension(3,nlocal) [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2938: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: fix_external_set_energy_global(id, eng) Set the global energy contribution for a :doc:`fix external ` instance with the given ID. .. versionadded:: 22Dec2022 This is a companion function to :f:func:`set_fix_external_callback` and :f:func:`fix_external_get_force` that also sets the contribution to the global energy from the external program. The value of the *eng* argument will be stored in the fix and applied on the current and all following time steps until changed by another call to this function. The energy is in energy units as determined by the current :doc:`units ` settings and is the **total** energy of the contribution. Thus, when running in parallel, all MPI processes have to call this function with the **same** value, and this will be returned as a scalar property of the fix external instance when accessed in LAMMPS input commands or from variables. Please see the documentation for :doc:`fix external ` for more information about how to use the fix and how to couple it with an external program. :p character(len=*) id: fix ID of fix external instance :p real(c_double) eng: total energy to be added to the global energy :to: :cpp:func:`lammps_fix_external_set_energy_global` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2966: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: fix_external_set_virial_global(id, virial) Set the global virial contribution for a fix external instance with the given ID. .. versionadded:: 22Dec2022 This is a companion function to :f:subr:`set_fix_external_callback` and :f:func:`fix_external_get_force` to set the contribution to the global virial from an external program. The six values of the *virial* array will be stored in the fix and applied on the current and all following time steps until changed by another call to this function. The components of the virial need to be stored in the following order: *xx*, *yy*, *zz*, *xy*, *xz*, *yz*. In LAMMPS, the virial is stored internally as `stress*volume` in units of `pressure*volume` as determined by the current :doc:`units ` settings and is the **total** contribution. Thus, when running in parallel, all MPI processes have to call this function with the **same** value, and this will then be added by fix external. Please see the documentation for :doc:`fix external ` for more information about how to use the fix and how to couple it with an external code. :p character(len=*) id: fix ID of fix external instance :p real(c_double) virial [dimension(6)]: the six global stress tensor components to be added to the global virial :to: :cpp:func:`lammps_fix_external_set_virial_global` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:2998: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: fix_external_set_energy_peratom(id, eng) Set the per-atom energy contribution for a fix external instance with the given ID. .. versionadded:: 22Dec2022 This is a companion function to :f:subr:`set_fix_external_callback` to set the per-atom energy contribution due to the fix from the external program as part of the callback function. For this to work, the LAMMPS object must be passed as part of the *caller* argument when registering the callback function, or the callback function must otherwise have access to the LAMMPS object, such as through a module-based pointer. .. note:: This function is fully independent from :f:subr:`fix_external_set_energy_global` and will **NOT** add any contributions to the global energy tally and will **NOT** check whether the sum of the contributions added here are consistent with the global added energy. Please see the documentation for :doc:`fix external ` for more information about how to use the fix and how to couple it with an external code. :p character(len=*) id: fix ID of the fix external instance :p real(c_double) eng [dimension(:)]: array of length *nlocal* containing the energy to add to the per-atom energy :to: :cpp:func:`lammps_fix_external_set_energy_peratom` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:3031: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: set_fix_external_set_virial_peratom(id, virial) This is a companion function to :f:subr:`set_fix_external_callback` to set the per-atom virial contribution due to the fix from the external program as part of the callback function. For this to work, the LAMMPS object must be passed as the *caller* argument when registering the callback function. .. versionadded:: 22Dec2022 .. note:: This function is fully independent from :f:subr:`fix_external_set_virial_global` and will **NOT** add any contributions to the global virial tally and **NOT** check whether the sum of the contributions added here are consistent with the global added virial. The order and units of the per-atom stress tensor elements are the same as for the global virial. The type and dimensions of the per-atom virial array must be ``REAL(c_double), DIMENSION(6,nlocal)``. Please see the documentation for :doc:`fix external ` for more information about how to use the fix and how to couple it with an external program. :p character(len=*) id: fix ID of fix external instance :p real(c_double) virial [dimension(:,:)]: an array of :math:`6 \times{}`\ *nlocal* components to be added to the per-atom virial :to: :cpp:func:`lammps_set_virial_peratom` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:3063: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: fix_external_set_vector_length(id, length) Set the vector length for a global vector stored with fix external for analysis. .. versionadded:: 22Dec2022 This is a companion function to :f:subr:`set_fix_external_callback` and :f:func:`fix_external_get_force` to set the length of a global vector of properties that will be stored with the fix via :f:subr:`fix_external_set_vector`. This function needs to be called **before** a call to :f:subr:`fix_external_set_vector` and **before** a run or minimize command. When running in parallel, it must be called from **all** MPI processes with the same length argument. Please see the documentation for :doc:`fix external ` for more information about how to use the fix and how to couple it with an external program. :p character(len=*) id: fix ID of fix external instance :p integer(c_int) length: length of the global vector to be stored with the fix :to: :cpp:func:`lammps_fix_external_set_vector_length` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:3091: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: fix_external_set_vector(id, idx, val) Store a global vector value for a fix external instance with the given ID. .. versionadded:: 22Dec2022 This is a companion function to :f:subr:`set_fix_external_callback` and :f:func:`fix_external_get_force` to set the values of a global vector of properties that will be stored with the fix and can be accessed from within LAMMPS input commands (e.g., fix ave/time or variables) when used in a vector context. This function needs to be called **after** a call to :f:subr:`fix_external_set_vector_length` and **before** a run or minimize command. When running in parallel, it must be called from **all** MPI processes with the **same** *idx* and *val* parameters. The variable *val* is assumed to be extensive. .. note:: The index in the *idx* parameter is 1-based (i.e., the first element is set with *idx*\ :math:`{} = 1`, and the last element of the vector with *idx*\ :math:`{} = N`, where :math:`N` is the value of the *length* parameter of the call to :f:subr:`fix_external_set_vector_length`). Please see the documentation for :doc:`fix external ` for more information about how to use the fix and how to couple it with an external code. :p character(len=*) id: ID of fix external instance :p integer(c_int) idx: 1-based index in global vector :p integer(c_int) val: value to be stored in global vector at index *idx* :to: :cpp:func:`lammps_fix_external_set_vector` [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:3127: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: flush_buffers() This function calls :cpp:func:`lammps_flush_buffers`, which flushes buffered output to be written to screen and logfile. This can simplify capturing output from LAMMPS library calls. .. versionadded:: 3Nov2022 :to: :cpp:func:`lammps_flush_buffers` [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:3139: ERROR: Unknown directive type "f:function". .. f:function:: is_running() Check if LAMMPS is currently inside a run or minimization. .. versionadded:: 3Nov2022 This function can be used from signal handlers or multi-threaded applications to determine if the LAMMPS instance is currently active. :to: :cpp:func:`lammps_is_running` :r is_running: ``.FALSE.`` if idle or ``.TRUE.`` if active :rtype is_running: logical [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:3154: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: force_timeout() Force a timeout to stop an ongoing run cleanly. .. versionadded:: 3Nov2022 This function can be used from signal handlers or multi-threaded applications to terminate an ongoing run cleanly. :to: :cpp:func:`lammps_force_timeout` [docutils] WARNING: unknown directive name: f:function /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:3167: ERROR: Unknown directive type "f:function". .. f:function:: has_error() Check if there is a (new) error message available. .. versionadded:: 3Nov2022 This function can be used to query if an error inside of LAMMPS has thrown a :ref:`C++ exception `. :to: :cpp:func:`lammps_has_error` :r has_error: ``.TRUE.`` if there is an error. :rtype has_error: logical [docutils] WARNING: unknown directive name: f:subroutine /build/lammps-rlhK5n/lammps-20260704+dfsg/doc/src/Fortran.rst:3182: ERROR: Unknown directive type "f:subroutine". .. f:subroutine:: get_last_error_message(buffer[,status]) Copy the last error message into the provided buffer. .. versionadded:: 3Nov2022 This function can be used to retrieve the error message that was set in the event of an error inside of LAMMPS that resulted in a :ref:`C++ exception `. A suitable buffer for a string has to be provided. If the internally-stored error message is longer than the string, it will be truncated accordingly. The optional argument *status* indicates the kind of error: a "1" indicates an error that occurred on all MPI ranks and is often recoverable, while a "2" indicates an abort that would happen only in a single MPI rank and thus may not be recoverable, as other MPI ranks may be waiting on the failing MPI rank(s) to send messages. :p character(len=\*) buffer: string buffer to copy the error message into :o integer(c_int) status [optional]: 1 when all ranks had the error, 2 on a single-rank error. :to: :cpp:func:`lammps_get_last_error_message` [docutils] WARNING: unknown role name: f:func :4: ERROR: Unknown interpreted text role "f:func". [docutils] WARNING: autodoc: failed to import 'numpy_wrapper.numpy_wrapper' from module 'lammps'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path module = _import_module(module_name, try_reload=True) File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 221, in _import_module module = importlib.import_module(modname) File "/usr/lib/python3.14/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "", line 1406, in _gcd_import File "", line 1371, in _find_and_load File "", line 1342, in _find_and_load_unlocked File "", line 938, in _load_unlocked File "", line 763, in exec_module File "", line 491, in _call_with_frames_removed File "/build/lammps-rlhK5n/lammps-20260704+dfsg/doc/../python/lammps/numpy_wrapper.py", line 20, in import numpy as np ModuleNotFoundError: No module named 'numpy' [autodoc.import_object] WARNING: autodoc: failed to import 'numpy_wrapper.NumPyNeighList' from module 'lammps'; the following exception was raised: Traceback (most recent call last): File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 131, in _import_from_module_and_path module = _import_module(module_name, try_reload=True) File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/_dynamic/_importer.py", line 221, in _import_module module = importlib.import_module(modname) File "/usr/lib/python3.14/importlib/__init__.py", line 88, in import_module return _bootstrap._gcd_import(name[level:], package, level) ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "", line 1406, in _gcd_import File "", line 1371, in _find_and_load File "", line 1342, in _find_and_load_unlocked File "", line 938, in _load_unlocked File "", line 763, in exec_module File "", line 491, in _call_with_frames_removed File "/build/lammps-rlhK5n/lammps-20260704+dfsg/doc/../python/lammps/numpy_wrapper.py", line 20, in import numpy as np ModuleNotFoundError: No module named 'numpy' [autodoc.import_object] ############################################ env: ‘rst_anchor_check’: No such file or directory Found 94 packages Parsed style names w/o suffixes from C++ tree in ../src: Angle styles: 29 Atom styles: 30 Body styles: 3 Bond styles: 29 Command styles: 54 Compute styles: 177 Dihedral styles: 19 Dump styles: 35 Fix styles: 309 Improper styles: 14 Integrate styles: 5 Kspace styles: 24 Minimize styles: 9 Pair styles: 326 Reader styles: 4 Region styles: 9 ---------------------------------------------------- Total number of styles (including suffixes): 2421 Total number of style index entries: 1610 ############################################ Build finished. The HTML pages are in doc/html. make[2]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg/doc' doc build: 2994 warning line(s) logged to doc-sphinx-warnings.log (sphinxfortran extension unavailable, see debian/patches/30_build_docs.patch) make[1]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' debian/rules override_dh_auto_test-arch make[1]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' mkdir test; cp examples/crack/* test/ cd test; timeout --verbose 300 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/lmp -in in.crack LAMMPS (4 Jul 2026) OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. using 1 OpenMP thread(s) per MPI task Lattice spacing in x,y,z = 1.1142771 1.9299846 1.1142771 Created orthogonal box = (0 0 -0.27856928) to (111.42771 77.199383 0.27856928) 1 by 1 by 1 MPI processor grid Created 8141 atoms using lattice units in orthogonal box = (-0.011142771 -0.0077199383 -0.27856928) to (111.43885 77.207103 0.27856928) create_atoms CPU = 0.004 seconds 302 atoms in group lower 302 atoms in group upper 604 atoms in group boundary 7537 atoms in group mobile 841 atoms in group leftupper 841 atoms in group leftlower Setting atom values ... 841 settings made for type Setting atom values ... 841 settings made for type Setting atom values ... 302 settings made for type Setting atom values ... 302 settings made for type WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:570) Generated 0 of 10 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update: every = 1 steps, delay = 5 steps, check = yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 2.8 ghost atom cutoff = 2.8 binsize = 1.4, bins = 80 56 1 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair lj/cut, perpetual attributes: half, newton on pair build: half/bin/atomonly/newton stencil: half/bin/2d bin: standard Setting up Verlet run ... Unit style : lj Current step : 0 Time step : 0.003 Per MPI rank memory allocation (min/avg/max) = 3.112 | 3.112 | 3.112 Mbytes Step Temp E_pair E_mol TotEng Press Volume 0 0.065651733 -3.2595015 0 -3.1987287 -0.036239172 8605.5917 200 0.060086376 -3.2531936 0 -3.1975725 -0.23125026 8638.8101 400 0.060533553 -3.2509973 0 -3.1949623 -0.4305406 8679.2464 600 0.06082965 -3.2466949 0 -3.1903858 -0.6028531 8716.7569 800 0.061677224 -3.2413215 0 -3.1842278 -0.7482749 8756.226 1000 0.062383731 -3.2349273 0 -3.1771796 -0.87425132 8793.1116 1200 0.063709246 -3.2276094 0 -3.1686347 -0.98020161 8828.8863 1400 0.065404552 -3.2196608 0 -3.1591168 -1.0695384 8866.4893 1600 0.067579602 -3.2110378 0 -3.1484804 -1.1456387 8900.6772 1800 0.069324241 -3.2018536 0 -3.1376812 -1.2020999 8933.017 2000 0.071014927 -3.1921108 0 -3.1263733 -1.2430105 8963.9853 2200 0.072992881 -3.1818701 0 -3.1143017 -1.2701297 9004.4136 2400 0.075000723 -3.1712313 0 -3.1018043 -1.2830866 9034.9991 2600 0.076843477 -3.1601004 0 -3.0889675 -1.27924 9072.1325 2800 0.078671706 -3.1487747 0 -3.0759495 -1.2659604 9103.9526 3000 0.080713586 -3.1373277 0 -3.0626123 -1.2440673 9134.552 3200 0.08309469 -3.1260242 0 -3.0491047 -1.214547 9169.0003 3400 0.085424766 -3.1146623 0 -3.0355859 -1.1839326 9206.909 3600 0.087396485 -3.1029493 0 -3.0220477 -1.143412 9233.783 3800 0.089007987 -3.090822 0 -3.0084286 -1.1000791 9259.0348 4000 0.089813071 -3.0794078 0 -2.9962692 -1.062847 9281.82 4200 0.08584753 -3.0668559 0 -2.9873882 -1.037972 9308.8113 4400 0.086197517 -3.0559678 0 -2.9761761 -1.028843 9328.9666 4600 0.086766447 -3.0437627 0 -2.9634443 -1.0208785 9361.9925 4800 0.088195149 -3.0328502 0 -2.9512093 -1.0272063 9395.6122 5000 0.089415266 -3.0228825 0 -2.9401122 -1.0215336 9436.1637 Loop time of 3.8147 on 1 procs for 5000 steps with 8141 atoms Performance: 339738.711 tau/day, 1310.720 timesteps/s, 10.671 Matom-step/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 3.2063 | 3.2063 | 3.2063 | 0.0 | 84.05 Neigh | 0.18137 | 0.18137 | 0.18137 | 0.0 | 4.75 Comm | 0.002997 | 0.002997 | 0.002997 | 0.0 | 0.08 Output | 0.0012869 | 0.0012869 | 0.0012869 | 0.0 | 0.03 Modify | 0.31754 | 0.31754 | 0.31754 | 0.0 | 8.32 Other | | 0.1052 | | | 2.76 Nlocal: 8141 ave 8141 max 8141 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 71389 ave 71389 max 71389 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 71389 Ave neighs/atom = 8.7690701 Neighbor list builds = 100 Dangerous builds = 0 Total wall time: 0:00:03 rm -rf test mkdir test; cp examples/crack/* test/ cd test; timeout --verbose 300 mpirun -np 2 --allow-run-as-root /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/build/lmp -in in.crack -------------------------------------------------------------------------- A deprecated MCA variable value was specified in the environment or on the command line. Deprecated MCA variables should be avoided; they may disappear in future releases. Deprecated variable: schizo_proxy New variable: personality -------------------------------------------------------------------------- -------------------------------------------------------------------------- A deprecated MCA variable value was specified in the environment or on the command line. Deprecated MCA variables should be avoided; they may disappear in future releases. Deprecated variable: rmaps_default_mapping_policy New variable: mapby -------------------------------------------------------------------------- LAMMPS (4 Jul 2026) OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. using 1 OpenMP thread(s) per MPI task Lattice spacing in x,y,z = 1.1142771 1.9299846 1.1142771 Created orthogonal box = (0 0 -0.27856928) to (111.42771 77.199383 0.27856928) 2 by 1 by 1 MPI processor grid Created 8141 atoms using lattice units in orthogonal box = (-0.011142771 -0.0077199383 -0.27856928) to (111.43885 77.207103 0.27856928) create_atoms CPU = 0.003 seconds 302 atoms in group lower 302 atoms in group upper 604 atoms in group boundary 7537 atoms in group mobile 841 atoms in group leftupper 841 atoms in group leftlower Setting atom values ... 841 settings made for type Setting atom values ... 841 settings made for type Setting atom values ... 302 settings made for type Setting atom values ... 302 settings made for type WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:570) Generated 0 of 10 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update: every = 1 steps, delay = 5 steps, check = yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 2.8 ghost atom cutoff = 2.8 binsize = 1.4, bins = 80 56 1 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair lj/cut, perpetual attributes: half, newton on pair build: half/bin/atomonly/newton stencil: half/bin/2d bin: standard Setting up Verlet run ... Unit style : lj Current step : 0 Time step : 0.003 Per MPI rank memory allocation (min/avg/max) = 3.097 | 3.097 | 3.097 Mbytes Step Temp E_pair E_mol TotEng Press Volume 0 0.065993465 -3.2595015 0 -3.1984123 -0.035939913 8605.5917 200 0.060035253 -3.2531886 0 -3.1976149 -0.22757684 8638.5331 400 0.06054278 -3.2510706 0 -3.1950271 -0.42811733 8677.8288 600 0.060576995 -3.246816 0 -3.1907408 -0.60017647 8717.6131 800 0.060802753 -3.2413477 0 -3.1850635 -0.74499308 8756.4512 1000 0.061812114 -3.2349942 0 -3.1777756 -0.87130079 8796.9575 1200 0.06317147 -3.2277552 0 -3.1692783 -0.98010628 8823.1488 1400 0.065125405 -3.2198031 0 -3.1595175 -1.0690179 8858.8358 1600 0.06725411 -3.2111272 0 -3.148871 -1.1440993 8892.6607 1800 0.069389572 -3.2019689 0 -3.137736 -1.199078 8933.7591 2000 0.071276448 -3.1921621 0 -3.1261826 -1.239553 8969.0463 2200 0.073243486 -3.1818809 0 -3.1140805 -1.264839 8997.6559 2400 0.075063494 -3.1711703 0 -3.1016851 -1.2772278 9038.4932 2600 0.076789207 -3.1600658 0 -3.0889832 -1.2754953 9073.4997 2800 0.07875979 -3.1487143 0 -3.0758075 -1.2637926 9106.2245 3000 0.080591853 -3.1372361 0 -3.0626334 -1.2388824 9142.7862 3200 0.08227693 -3.125423 0 -3.0492605 -1.2055283 9169.4322 3400 0.084289444 -3.1136554 0 -3.03563 -1.1672422 9204.8205 3600 0.086720297 -3.1021183 0 -3.0218427 -1.126381 9233.2656 3800 0.089264018 -3.0909262 0 -3.0082959 -1.0899774 9265.4143 4000 0.091377688 -3.0795096 0 -2.9949227 -1.0580229 9297.6799 4200 0.092665135 -3.0678736 0 -2.9820949 -1.0390124 9331.6135 4400 0.09055434 -3.0560482 0 -2.9722234 -1.0323741 9362.2075 4600 0.088763719 -3.0446018 0 -2.9624346 -1.027693 9391.6949 4800 0.089467982 -3.0337452 0 -2.950926 -1.0232092 9427.4155 5000 0.089910902 -3.0237571 0 -2.9405279 -1.0174796 9452.031 Loop time of 2.09635 on 2 procs for 5000 steps with 8141 atoms Performance: 618216.662 tau/day, 2385.095 timesteps/s, 19.417 Matom-step/s 98.4% CPU use with 2 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1.6341 | 1.6379 | 1.6417 | 0.3 | 78.13 Neigh | 0.095846 | 0.10223 | 0.10861 | 2.0 | 4.88 Comm | 0.11727 | 0.12916 | 0.14105 | 3.3 | 6.16 Output | 0.0008292 | 0.0013658 | 0.0019023 | 1.5 | 0.07 Modify | 0.16306 | 0.16325 | 0.16345 | 0.0 | 7.79 Other | | 0.06241 | | | 2.98 Nlocal: 4070.5 ave 4085 max 4056 min Histogram: 1 0 0 0 0 0 0 0 0 1 Nghost: 207 ave 208 max 206 min Histogram: 1 0 0 0 0 0 0 0 0 1 Neighs: 35700 ave 35927 max 35473 min Histogram: 1 0 0 0 0 0 0 0 0 1 Total # of neighbors = 71400 Ave neighs/atom = 8.7704213 Neighbor list builds = 106 Dangerous builds = 0 Total wall time: 0:00:02 rm -rf test make[1]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' dh_auto_test -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build -Nlammps -Nliblammps-dev -Nliblammps0t64 -Npython3-lammps create-stamp debian/debhelper-build-stamp dh_testroot -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dh_prep -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dh_auto_install -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build -Nlammps-doc -Nlammps-data -Nlammps-examples DEB_PYTHON_INSTALL_LAYOUT=deb DESTDIR=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/tmp LC_ALL=C.UTF-8 PKG_CONFIG=x86_64-linux-gnu-pkgconf cmake --install debian/build -- Install configuration: "None" -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/bin/lmp -- Set non-toolchain portion of runtime path of "/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/bin/lmp" to "" -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/angle.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/atom.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/bond.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/citeme.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/comm.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/command.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/compute.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/dihedral.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/domain.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/error.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/exceptions.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/fix.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/force.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/group.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/improper.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/input.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/info.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/json.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/json_fwd.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/kspace.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/lammps.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/lattice.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/library.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/lmppython.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/lmptype.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/memory.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/modify.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/neighbor.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/neigh_list.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/output.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/pair.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/platform.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/pointers.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/region.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/timer.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/universe.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/update.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/utils.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/variable.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/fmt/core.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/fmt/format.h -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/nlohmann/json_fwd.hpp -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/include/lammps/nlohmann/json.hpp -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu/liblammps.so.0 -- Set non-toolchain portion of runtime path of "/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu/liblammps.so.0" to "" -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu/liblammps.so -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig/liblammps.pc -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/LAMMPS/LAMMPS_Targets.cmake -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/LAMMPS/LAMMPS_Targets-none.cmake -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/LAMMPS/LAMMPSConfig.cmake -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/LAMMPS/LAMMPSConfigVersion.cmake -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/share/man/man1/lmp.1 -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/etc/profile.d/lammps.sh -- Installing: /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/etc/profile.d/lammps.csh chmod -R u\+rwX /build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/tmp debian/rules execute_after_dh_auto_install-arch make[1]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' LD_LIBRARY_PATH=/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu \ CMAKE_PREFIX_PATH=/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu/cmake \ pybuild --dir=/build/lammps-rlhK5n/lammps-20260704+dfsg/python --system=pyproject --name=lammps I: pybuild plugin_pyproject:142: Building wheel for python3.14 with "build" module I: pybuild base:385: python3.14 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/lammps-rlhK5n/lammps-20260704+dfsg/.pybuild/cpython3_3.14_lammps * Building wheel... running bdist_wheel running build running build_py creating build/lib/lammps copying lammps/formats.py -> build/lib/lammps copying lammps/__init__.py -> build/lib/lammps copying lammps/core.py -> build/lib/lammps copying lammps/data.py -> build/lib/lammps copying lammps/constants.py -> build/lib/lammps copying lammps/numpy_wrapper.py -> build/lib/lammps creating build/lib/lammps/mliap copying lammps/mliap/mliap_unified_lj.py -> build/lib/lammps/mliap copying lammps/mliap/__init__.py -> build/lib/lammps/mliap copying lammps/mliap/pytorch.py -> build/lib/lammps/mliap copying lammps/mliap/loader.py -> build/lib/lammps/mliap copying lammps/mliap/mliap_unified_abc.py -> build/lib/lammps/mliap creating build/lib/lammps/ipython copying lammps/ipython/wrapper.py -> build/lib/lammps/ipython copying lammps/ipython/__init__.py -> build/lib/lammps/ipython copying lammps/ipython/magics.py -> build/lib/lammps/ipython installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/lammps copying build/lib/lammps/formats.py -> build/bdist.linux-x86_64/wheel/./lammps copying build/lib/lammps/__init__.py -> build/bdist.linux-x86_64/wheel/./lammps creating build/bdist.linux-x86_64/wheel/lammps/mliap copying build/lib/lammps/mliap/mliap_unified_lj.py -> build/bdist.linux-x86_64/wheel/./lammps/mliap copying build/lib/lammps/mliap/__init__.py -> build/bdist.linux-x86_64/wheel/./lammps/mliap copying build/lib/lammps/mliap/pytorch.py -> build/bdist.linux-x86_64/wheel/./lammps/mliap copying build/lib/lammps/mliap/loader.py -> build/bdist.linux-x86_64/wheel/./lammps/mliap copying build/lib/lammps/mliap/mliap_unified_abc.py -> build/bdist.linux-x86_64/wheel/./lammps/mliap copying build/lib/lammps/core.py -> build/bdist.linux-x86_64/wheel/./lammps copying build/lib/lammps/data.py -> build/bdist.linux-x86_64/wheel/./lammps copying build/lib/lammps/constants.py -> build/bdist.linux-x86_64/wheel/./lammps copying build/lib/lammps/numpy_wrapper.py -> build/bdist.linux-x86_64/wheel/./lammps creating build/bdist.linux-x86_64/wheel/lammps/ipython copying build/lib/lammps/ipython/wrapper.py -> build/bdist.linux-x86_64/wheel/./lammps/ipython copying build/lib/lammps/ipython/__init__.py -> build/bdist.linux-x86_64/wheel/./lammps/ipython copying build/lib/lammps/ipython/magics.py -> build/bdist.linux-x86_64/wheel/./lammps/ipython running install_egg_info running egg_info creating lammps.egg-info writing lammps.egg-info/PKG-INFO writing dependency_links to lammps.egg-info/dependency_links.txt writing top-level names to lammps.egg-info/top_level.txt writing manifest file 'lammps.egg-info/SOURCES.txt' reading manifest file 'lammps.egg-info/SOURCES.txt' writing manifest file 'lammps.egg-info/SOURCES.txt' Copying lammps.egg-info to build/bdist.linux-x86_64/wheel/./lammps-2026.7.4.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/lammps-2026.7.4.dist-info/WHEEL creating '/build/lammps-rlhK5n/lammps-20260704+dfsg/.pybuild/cpython3_3.14_lammps/.tmp-irvjh4z5/lammps-2026.7.4-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'lammps/__init__.py' adding 'lammps/constants.py' adding 'lammps/core.py' adding 'lammps/data.py' adding 'lammps/formats.py' adding 'lammps/numpy_wrapper.py' adding 'lammps/ipython/__init__.py' adding 'lammps/ipython/magics.py' adding 'lammps/ipython/wrapper.py' adding 'lammps/mliap/__init__.py' adding 'lammps/mliap/loader.py' adding 'lammps/mliap/mliap_unified_abc.py' adding 'lammps/mliap/mliap_unified_lj.py' adding 'lammps/mliap/pytorch.py' adding 'lammps-2026.7.4.dist-info/METADATA' adding 'lammps-2026.7.4.dist-info/WHEEL' adding 'lammps-2026.7.4.dist-info/top_level.txt' adding 'lammps-2026.7.4.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Successfully built lammps-2026.7.4-py3-none-any.whl I: pybuild plugin_pyproject:168: Unpacking wheel built for python3.14 with "installer" module I: pybuild plugin_pyproject:199: Copying package built for python3.14 to destdir W: pybuild base:328: No test runner selected, defaulting to unittest, ignoring test discovery problems. Use --test-unittest to explicitly select the unittest runner. I: pybuild base:385: cd /build/lammps-rlhK5n/lammps-20260704+dfsg/.pybuild/cpython3_3.14_lammps/build; python3.14 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s NO TESTS RAN make[1]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' dh_install -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dh_installdocs -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build debian/rules override_dh_sphinxdoc make[1]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' echo "sphinx and dh_sphinx are broken for lammps docs. See Bug#1059621" sphinx and dh_sphinx are broken for lammps docs. See Bug#1059621 make[1]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' dh_installchangelogs -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build debian/rules override_dh_installexamples make[1]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' dh_installexamples -X.gitignore make[1]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' debian/rules override_dh_installman-arch make[1]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' sed -i 's|TH LAMMPS|TH LAMMPS \"1\"|g' /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/share/man/man1/lmp.1 dh_installman -a make[1]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' dh_installman -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build -Nlammps -Nliblammps-dev -Nliblammps0t64 -Npython3-lammps debian/rules execute_before_dh_python3-arch make[1]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' set -e; \ cd python/examples; \ LD_LIBRARY_PATH=/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu \ PYTHONPATH=/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/python3-lammps/usr/lib/python3.14/dist-packages:${PYTHONPATH} \ timeout --verbose 300 python3 demo.py LAMMPS (4 Jul 2026) Python output: Natoms, mass, x[0][0] coord = 4000 1.0 16.767988851705528 Temperature from compute = 0.7571533403732014 Energy from equal-style variable = -5.758142569688168 Velocity component from atom-style variable = -1.0131655567386921 Volume from get_thermo = 4738.213693437576 Natoms from get_natoms = 4000 Global coords from gather_atoms = 16.767988851705528 16.621004261651628 0.14158807746974947 Changed x[0][0] via scatter_atoms = 17.767988851705528 OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. using 1 OpenMP thread(s) per MPI task Lattice spacing in x,y,z = 1.6795962 1.6795962 1.6795962 Created orthogonal box = (0 0 0) to (16.795962 16.795962 16.795962) 1 by 1 by 1 MPI processor grid Created 4000 atoms using lattice units in orthogonal box = (0 0 0) to (16.795962 16.795962 16.795962) create_atoms CPU = 0.004 seconds Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update: every = 20 steps, delay = 0 steps, check = no max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 2.8 ghost atom cutoff = 2.8 binsize = 1.4, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair lj/cut, perpetual attributes: half, newton on pair build: half/bin/atomonly/newton stencil: half/bin/3d bin: standard Setting up Verlet run ... Unit style : lj Current step : 0 Time step : 0.005 Per MPI rank memory allocation (min/avg/max) = 3.763 | 3.763 | 3.763 Mbytes Step Temp E_pair E_mol TotEng Press 0 1.44 -6.7733681 0 -4.6139081 -5.0199732 100 0.75715334 -5.7581426 0 -4.6226965 0.20850222 Loop time of 0.195871 on 1 procs for 100 steps with 4000 atoms Performance: 220553.639 tau/day, 510.541 timesteps/s, 2.042 Matom-step/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 0.16234 | 0.16234 | 0.16234 | 0.0 | 82.88 Neigh | 0.026055 | 0.026055 | 0.026055 | 0.0 | 13.30 Comm | 0.0034441 | 0.0034441 | 0.0034441 | 0.0 | 1.76 Output | 3.2993e-05 | 3.2993e-05 | 3.2993e-05 | 0.0 | 0.02 Modify | 0.0029197 | 0.0029197 | 0.0029197 | 0.0 | 1.49 Other | | 0.001083 | | | 0.55 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5754 ave 5754 max 5754 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 150362 ave 150362 max 150362 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 150362 Ave neighs/atom = 37.5905 Neighbor list builds = 5 Dangerous builds not checked Total wall time: 0:00:00 make[1]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' dh_python3 -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dh_installsystemduser -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dh_lintian -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dh_perl -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dh_link -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dh_missing -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dh_strip -a -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dh_makeshlibs -a -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dh_shlibdeps -a -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dh_fixperms -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build debian/rules execute_after_dh_fixperms-indep make[1]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' find /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/ -type f -a -not -name *.sh -print -exec chmod 644 {} \; /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/reaxff/log.1Feb25.reaxff.rdx-shielded.g++.4 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/reaxff/data.tatb /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/reaxff/log.1Feb25.reaxff.tatb-shielded.g++.1 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/reaxff/water/log.1Feb25.water.qeq.field.g++.4 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/reaxff/water/in.water.qtpie /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/reaxff/water/log.20Mar25.reaxff.water-qeqr.g++.4 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/reaxff/water/log.20Mar25.reaxff.water-qeqr.g++.1 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/reaxff/water/log.20Mar25.reaxff.water-qeqr-field.g++.4 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/reaxff/water/in.water.acks2 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/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_polystyrene/P-P.rxnmap /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_polystyrene/M-M_pre.mol /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_polystyrene/log.10Dec2025.tiny_polystyrene.stabilized.g++.4 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_polystyrene/tiny_polystyrene.data /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_polystyrene/M-P_post.mol /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_polystyrene/P-P_pre.mol /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_polystyrene/M-M.rxnmap /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_polystyrene/M-M_post.mol /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon_json/rxn1_stp2_reacted.json /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon_json/rxn1_stp1_unreacted.json /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon_json/log.10Dec2025.tiny_nylon.stabilized.g++.4 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon_json/rxn1_stp1_reacted.json /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon_json/tiny_nylon.data /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon_json/in.tiny_nylon.stabilized /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon_json/rxn1_stp2_map /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon_json/rxn1_stp2_unreacted.json /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon_json/rxn1_stp1_map /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon_json/log.10Dec2025.tiny_nylon.stabilized.g++.1 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon/log.10Dec2025.tiny_nylon.stabilized.g++.4 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon/log.10Dec2025.tiny_nylon.unstabilized.g++.4 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon/tiny_nylon.data /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon/log.10Dec2025.tiny_nylon.unstabilized.g++.1 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon/rxn1_stp2_reacted.molecule_template /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon/in.tiny_nylon.stabilized_variable_probability 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/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/CO2.txt /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/log.2Jul25.hmc.flexible.melt.g++.1 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/data.bead /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/log.14Jun23.widom.lj.g++.1 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/log.30Mar26.gcmc.h2o.g++.4 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/data.spce /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/in.hmc.rigid /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/H2O.txt /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/in.sgcmc.eam /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/log.30Mar26.gcmc.restart.g++.1 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/log.13Oct21.pure.g++.4 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/log.13Dec22.sgcmc.eam.g++.1 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/in.gcmc.restart /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/in.gcmc.co2 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/log.24Nov25.gemc.lj.1.g++.5 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/log.30Mar26.gcmc.h2o.g++.1 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/log.30Mar26.gcmc.co2.g++.1 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/in.pure /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/log.14Jun23.widom.spce.g++.1 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/in.mixed /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/log.30Mar26.gcmc.co2.g++.4 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/log.24Nov25.gemc.lj.g++.5 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/in.gcmc.lj /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/log.30Mar26.gcmc.lj.g++.4 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/in.widom.lj 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/build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/log.14Jun23.widom.lj.g++.4 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/log.13Dec22.sgcmc.eam.g++.4 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/log.30Mar26.gcmc.restart.g++.4 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/log.15Jul25.hmc.rigid.g++.1 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/mc/in.gemc.lj /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/qeq/log.20Apr21.qeq.buck.g++.4 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/qeq/log.15Jul25.qeq.reaxff.g++.4 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/qeq/buck.inc /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/qeq/in.qeq.buck /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/qeq/in.qeq.reaxff /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/qeq/log.15Jul25.qeq.reaxff.g++.1 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/qeq/log.20Apr21.qeq.buck.g++.1 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/qeq/ffield.reax.cho /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/qeq/data.aC /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/qeq/param.qeq.reax /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/qeq/param.qeq2 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/qeq/param.qeq1 /build/lammps-rlhK5n/lammps-20260704+dfsg/debian/lammps-examples/usr/share/lammps/examples/qeq/data.CHO make[1]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' dh_strip_nondeterminism -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build debian/rules override_dh_compress make[1]: Entering directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' dh_compress -X.pdf make[1]: Leaving directory '/build/lammps-rlhK5n/lammps-20260704+dfsg' dh_installdeb -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dh_computeautosubstvars -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dh_gencontrol -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dpkg-gencontrol: warning: Depends field of package lammps-doc: substitution variable ${misc:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package lammps-doc: substitution variable ${sphinxdoc:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package lammps: substitution variable ${misc:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package lammps-data: substitution variable ${misc:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package liblammps-dev: substitution variable ${misc:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package liblammps-dev: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package lammps-examples: substitution variable ${misc:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package liblammps0t64: substitution variable ${misc:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package python3-lammps: substitution variable ${misc:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package python3-lammps: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dh_builddeb -O--sourcedirectory=cmake -O--builddirectory=/build/lammps-rlhK5n/lammps-20260704\+dfsg/debian/build dpkg-deb: building package 'python3-lammps' in '../python3-lammps_20260704+dfsg-2_amd64.deb'. dpkg-deb: building package 'lammps' in '../lammps_20260704+dfsg-2_amd64.deb'. dpkg-deb: building package 'lammps-dbgsym' in '../lammps-dbgsym_20260704+dfsg-2_amd64.deb'. dpkg-deb: building package 'liblammps-dev' in '../liblammps-dev_20260704+dfsg-2_amd64.deb'. dpkg-deb: building package 'lammps-doc' in '../lammps-doc_20260704+dfsg-2_all.deb'. dpkg-deb: building package 'liblammps0t64' in '../liblammps0t64_20260704+dfsg-2_amd64.deb'. dpkg-deb: building package 'liblammps0t64-dbgsym' in '../liblammps0t64-dbgsym_20260704+dfsg-2_amd64.deb'. dpkg-deb: building package 'lammps-data' in '../lammps-data_20260704+dfsg-2_all.deb'. dpkg-deb: building package 'lammps-examples' in '../lammps-examples_20260704+dfsg-2_all.deb'. dpkg-genbuildinfo -O../lammps_20260704+dfsg-2_amd64.buildinfo dpkg-genchanges -O../lammps_20260704+dfsg-2_amd64.changes dpkg-genchanges: info: not including original source code in upload dpkg-source -Zxz --after-build . dpkg-buildpackage: info: binary and diff upload (original source NOT included) -------------------------------------------------------------------------------- Build finished at 2026-09-26T04:25:56Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Sat, 26 Sep 2026 04:25:57 +0000 | +------------------------------------------------------------------------------+ lammps_20260704+dfsg-2_amd64.changes: ------------------------------------- Format: 1.8 Date: Fri, 25 Sep 2026 23:00:18 +0200 Source: lammps Binary: lammps lammps-data lammps-dbgsym lammps-doc lammps-examples liblammps-dev liblammps0t64 liblammps0t64-dbgsym python3-lammps Architecture: source all amd64 Version: 20260704+dfsg-2 Distribution: perl-5.44-throwaway Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Maximiliano Curia Description: lammps - Molecular Dynamics Simulator lammps-data - Molecular Dynamics Simulator. Data (potentials) lammps-doc - Molecular Dynamics Simulator (documentation) lammps-examples - Molecular Dynamics Simulator (examples) liblammps-dev - Molecular Dynamics Simulator (dev files) liblammps0t64 - Molecular Dynamics Simulator (shared library) python3-lammps - Molecular Dynamics Simulator Changes: lammps (20260704+dfsg-2) unstable; urgency=medium . * Drop sphinx-sitemap to fix reproducible doc builds Checksums-Sha1: fac4e23e242c6bcae216398669b78e948ae581af 2374 lammps_20260704+dfsg-2.dsc 98aae627e48f67e93a24bc2b95919f2248707b1d 22164 lammps_20260704+dfsg-2.debian.tar.xz cbb689271ee927fe9864ee2a96fe07f12095c61d 10143152 lammps-data_20260704+dfsg-2_all.deb e8f1959bd2f8568cfb1c3f15427e61f08a2481b8 86536 lammps-dbgsym_20260704+dfsg-2_amd64.deb a40eaa19847e4bcbd78996300ebec9c937d7df20 89936668 lammps-doc_20260704+dfsg-2_all.deb 251be4d0e8f072eb2c40448f67de178854f59ef0 59125520 lammps-examples_20260704+dfsg-2_all.deb cff7bb64389b77c0a0f8190c83a23067c965a003 31997 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liblammps0t64-dbgsym_20260704+dfsg-2_amd64.deb 3f1294e2837d3a7541c4a134351fc380e480d34e8659975f3d5428c1f59481c1 7522472 liblammps0t64_20260704+dfsg-2_amd64.deb 6c5befa98ff2ba2c6920f4fb1107d182cb35758692861975f540dfb2676baa90 75104 python3-lammps_20260704+dfsg-2_amd64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sat, 26 Sep 2026 04:25:53 +0000 Build-Path: /build/lammps-rlhK5n/lammps-20260704+dfsg Build-Tainted-By: usr-local-has-programs Installed-Build-Depends: adwaita-icon-theme (= 51.0-1), at-spi2-common (= 2.62.0-2), autoconf (= 2.73-2), automake (= 1:1.19-2), autopoint (= 1.0-5), autotools-dev (= 20240727.1+nmu1), base-files (= 14.2), base-passwd (= 3.6.8), bash (= 5.3-4), binutils (= 2.47-6), binutils-common (= 2.47-6), binutils-x86-64-linux-gnu (= 2.47-6), bsdextrautils (= 2.42.4-1), bubblewrap (= 0.13.0-1), build-essential (= 12.12), bzip2 (= 1.0.8-6+b2), ca-certificates (= 20260816), ca-certificates-java (= 20260311), cfortran (= 20210827-1.1), cmake (= 4.3.4-1), comerr-dev (= 2.1-1.47.4-1+b1), coreutils (= 9.10-1), cpp (= 4:16.1.0-3), cpp-15 (= 15.3.0-4), cpp-15-x86-64-linux-gnu (= 15.3.0-4), cpp-16 (= 16.2.0-3), cpp-16-for-host (= 16.2.0-3), cpp-16-x86-64-linux-gnu (= 16.2.0-3), cpp-for-host (= 4:16.1.0-3), cpp-x86-64-linux-gnu (= 4:16.1.0-3), dash (= 0.5.12-12), dbus (= 1.16.2-5+b1), dbus-bin (= 1.16.2-5+b1), dbus-daemon (= 1.16.2-5+b1), dbus-session-bus-common (= 1.16.2-5), dbus-system-bus-common (= 1.16.2-5), dbus-user-session (= 1.16.2-5+b1), dconf-gsettings-backend (= 51.0-2), dconf-service (= 51.0-2), debconf (= 1.5.92), debhelper (= 14.5), debianutils (= 5.24), default-jdk (= 2:1.25-77), default-jdk-headless (= 2:1.25-77), default-jre (= 2:1.25-77), default-jre-headless (= 2:1.25-77), dh-autoreconf (= 23), dh-python (= 7.20260623), dh-strip-nondeterminism (= 1.15.1-1), dictionaries-common (= 1.31.4), diffutils (= 1:3.12-1), dirmngr (= 2.4.9-7+b1), docutils-common (= 0.23+dfsg-2), doxygen (= 1.15.0+ds1-1.1), dpkg (= 1.23.11), dpkg-dev (= 1.23.11), dwz (= 0.17-1), emacsen-common (= 3.0.8), file (= 1:5.47-4), findutils (= 4.11.0-2), fontconfig (= 2.17.1-5), fontconfig-config (= 2.17.1-5), fonts-dejavu-core (= 2.37-9), fonts-dejavu-mono (= 2.37-9), fonts-font-awesome (= 7.3.0+dfsg-1), fonts-font-awesome-legacy (= 6-3), fonts-lato (= 2.015-1), fonts-lmodern (= 2.005-2), fonts-mathjax (= 2.7.9+dfsg-1), fonts-roboto-slab (= 2.002+20231012+ds-1), g++ (= 4:16.1.0-3), g++-16 (= 16.2.0-3), g++-16-x86-64-linux-gnu (= 16.2.0-3), g++-x86-64-linux-gnu (= 4:16.1.0-3), gcc (= 4:16.1.0-3), gcc-15 (= 15.3.0-4), gcc-15-base (= 15.3.0-4), gcc-15-x86-64-linux-gnu (= 15.3.0-4), gcc-16 (= 16.2.0-3), gcc-16-base (= 16.2.0-3), gcc-16-for-host (= 16.2.0-3), gcc-16-x86-64-linux-gnu (= 16.2.0-3), gcc-for-host (= 4:16.1.0-3), gcc-x86-64-linux-gnu (= 4:16.1.0-3), gdal-data (= 3.13.3+dfsg-1), gdal-plugins (= 3.13.3+dfsg-1+b1), gettext (= 1.0-5), gettext-base (= 1.0-5), gfortran-16 (= 16.2.0-3), gfortran-16-for-host (= 16.2.0-3), gfortran-16-x86-64-linux-gnu (= 16.2.0-3), gfortran-for-host (= 4:16.1.0-3), gfortran-x86-64-linux-gnu (= 4:16.1.0-3), git (= 1:2.55.0-1), git-man (= 1:2.55.0-1), glycin-loaders (= 2.2.1+ds-2), glycin-thumbnailers (= 2.2.1+ds-2), gnupg (= 2.4.9-7), gnupg-l10n (= 2.4.9-7), gpg (= 2.4.9-7+b1), gpg-agent (= 2.4.9-7+b1), gpgconf (= 2.4.9-7+b1), gpgsm (= 2.4.9-7+b1), graphviz (= 14.1.2-1+b4), grep (= 3.12-1), groff-base (= 1.24.1-1), gtk-update-icon-cache (= 4.24.0+ds-2), gzip (= 1.14-1), hdf5-helpers (= 2.2.0+repack-5), hicolor-icon-theme (= 0.18-2), hostname (= 3.25), htmldoc (= 1.9.24-1), htmldoc-common (= 1.9.24-1), hunspell-en-us (= 1:2020.12.07-4), ibverbs-providers (= 65.0-1), icu-devtools (= 78.3-2), init-system-helpers (= 1.69+nmu3), intltool-debian (= 0.35.0+20060710.6), java-common (= 0.77), krb5-multidev (= 1.22.1-3), latexmk (= 1:4.88~ds-1), libabsl20260526 (= 20260526.0-2+b1), libacl1 (= 2.4.0-1), libacl1-dev (= 2.4.0-1), libadios2-mpi-auxiliary-2.12 (= 2.12.1+dfsg1-3), libadios2-mpi-c++-2.12 (= 2.12.1+dfsg1-3), libadios2-mpi-c-2.12 (= 2.12.1+dfsg1-3), libadios2-mpi-core-2.12 (= 2.12.1+dfsg1-3), libadios2-mpi-plugins (= 2.12.1+dfsg1-3), libaec-dev (= 1.1.7-1), libaec0 (= 1.1.7-1), libamd-comgr3 (= 7.0.2+dfsg-3), libamdhip64-6 (= 6.4.3-5), libaom-dev (= 3.14.1-1), libaom3 (= 3.14.1-1), libapache-pom-java (= 33-2), libapparmor1 (= 4.1.8-2), libarchive-dev (= 3.8.9-1), libarchive-zip-perl (= 1.68-1), libarchive13t64 (= 3.8.9-1), libarmadillo-dev (= 1:15.2.1+dfsg-2), libarmadillo15 (= 1:15.2.1+dfsg-2), libarpack2-dev (= 3.9.1-6+b2), libarpack2t64 (= 3.9.1-6+b2), libasan8 (= 16.2.0-3), libasound2-data (= 1.2.16.1-1), libasound2t64 (= 1.2.16.1-1), libaspell15 (= 0.60.8.2-3+b1), libassuan-dev (= 3.0.2-2+b2), libassuan9 (= 3.0.2-2+b2), libatk-bridge2.0-0t64 (= 2.62.0-2), libatk1.0-0t64 (= 2.62.0-2), libatomic1 (= 16.2.0-3), libatspi2.0-0t64 (= 2.62.0-2), libattr1 (= 1:2.6.0-1), libattr1-dev (= 1:2.6.0-1), libaudit-common (= 1:4.2.1-1), libaudit1 (= 1:4.2.1-1), libavahi-client3 (= 0.8-18), libavahi-common-data (= 0.8-18), libavahi-common3 (= 0.8-18), libavcodec-dev (= 7:9.0.2-1), libavcodec63 (= 7:9.0.2-1), libavformat-dev (= 7:9.0.2-1), libavformat63 (= 7:9.0.2-1), libavif-dev (= 1.4.2-1), libavif16 (= 1.4.2-1), libavutil-dev (= 7:9.0.2-1), libavutil61 (= 7:9.0.2-1), libb2-1 (= 0.98.1-1.1+b3), libbinutils (= 2.47-6), libblas-dev (= 3.12.1-8), libblas3 (= 3.12.1-8), libblkid1 (= 2.42.4-1), libblosc-dev (= 1.21.5+ds-2+b2), libblosc1 (= 1.21.5+ds-2+b2), libblosc2-7 (= 2.23.1+ds-2), libbluray4 (= 1:1.5.0-3), libboost1.90-dev (= 1.90.0-6.1+b1), libbrotli-dev (= 1.2.0-4+b1), libbrotli1 (= 1.2.0-4+b1), libbsd0 (= 0.12.2-3), libbz2-1.0 (= 1.0.8-6+b2), libbz2-dev (= 1.0.8-6+b2), libc-bin (= 2.43-6), libc-dev-bin (= 2.43-6), libc-gconv-modules-extra (= 2.43-6), libc6 (= 2.43-6), libc6-dev (= 2.43-6), libcairo-gobject2 (= 1.18.4-3+b1), libcairo2 (= 1.18.4-3+b1), libcap-ng0 (= 0.9.6-1), libcap2 (= 1:2.78-1+b1), libcbor0.10 (= 0.10.2-2.2), libcc1-0 (= 16.2.0-3), libcdt6 (= 14.1.2-1+b4), libcfitsio-dev (= 4.7.0-2), libcfitsio10t64 (= 4.7.0-2), libcgraph8 (= 14.1.2-1+b4), libchromaprint1 (= 1.6.1-1+b1), libcjson1 (= 1.7.19-2+b1), libclang-common-21-dev (= 1:21.1.8-13), libclang-cpp21 (= 1:21.1.8-13), libclang1-21 (= 1:21.1.8-13), libcloudproviders0 (= 0.4.1-1), libcodec2-1.2 (= 1.2.0-5), libcolord2 (= 1.4.8-3), libcom-err2 (= 1.47.4-1+b1), libcommons-logging-java (= 1.3.0-2), libcommons-parent-java (= 56-1), libcrypt1 (= 1:4.5.2+20251210-1), libctf-nobfd0 (= 2.47-6), libctf0 (= 2.47-6), libcups2t64 (= 2.4.18-1), libcurl3t64-gnutls (= 8.23.0~rc1-2), libcurl4-gnutls (= 8.23.0~rc1-2), libcurl4-gnutls-dev (= 8.23.0~rc1-2), libcurl4t64 (= 8.23.0~rc1-2), libdatrie1 (= 0.2.14-2), libdav1d-dev (= 1.5.4-1), libdav1d7 (= 1.5.4-1), libdb5.3t64 (= 5.3.28+dfsg2-11+b1), libdbus-1-3 (= 1.16.2-5+b1), libdconf1 (= 51.0-2), libde265-0 (= 1.1.3-1+b1), libdebconfclient0 (= 0.283), libdebhelper-perl (= 14.5), libdeflate-dev (= 1.25-1), libdeflate0 (= 1.25-1), libdouble-conversion3 (= 3.4.0-1+b1), libdpkg-perl (= 1.23.11), libdrm-amdgpu1 (= 2.4.134-3), libdrm-common (= 2.4.134-3), libdrm-intel1 (= 2.4.134-3), libdrm2 (= 2.4.134-3), libduktape207 (= 2.7.0-2+b3), libdvdnav4 (= 7.0.0-2+b1), libdvdread8t64 (= 7.1.1-1), libedit2 (= 3.1-20260512-1), libegl-mesa0 (= 26.2.3-2), libegl1 (= 1.7.0-3+b1), libeigen3-dev (= 5.0.1-3), libelf1t64 (= 0.196-1), libenchant-2-2 (= 2.8.16+dfsg-4), libepoxy0 (= 1.5.10-2+b2), liberror-perl (= 0.17030-1), libesmtp6 (= 1.1.0-3.2+b2), libevdev2 (= 1.13.7+dfsg-1), libevent-2.1-7t64 (= 2.1.13-stable-1), libevent-core-2.1-7t64 (= 2.1.13-stable-1), libevent-dev (= 2.1.13-stable-1), libevent-extra-2.1-7t64 (= 2.1.13-stable-1), libevent-openssl-2.1-7t64 (= 2.1.13-stable-1), libevent-pthreads-2.1-7t64 (= 2.1.13-stable-1), libexpat1 (= 2.8.4-2), libexpat1-dev (= 2.8.4-2), libexprtk-dev (= 0.0.3-4), libext2fs-dev (= 1.47.4-1+b1), libext2fs2t64 (= 1.47.4-1+b1), libfabric1 (= 2.1.0-1.1+b2), libffi8 (= 3.8.0-2), libfftw3-bin (= 3.3.11-1), libfftw3-dev (= 3.3.11-1), libfftw3-double3 (= 3.3.11-1), libfftw3-long3 (= 3.3.11-1), libfftw3-quad3 (= 3.3.11-1), libfftw3-single3 (= 3.3.11-1), libfido2-1 (= 1.17.0-2), libfile-stripnondeterminism-perl (= 1.15.1-1), libfltk-images1.3t64 (= 1.3.11-3+b1), libfltk1.3t64 (= 1.3.11-3+b1), libfmt10 (= 10.1.1+ds1-4+b2), libfontbox-java (= 1:1.8.16-5), libfontconfig-dev (= 2.17.1-5), libfontconfig1 (= 2.17.1-5), libfontenc1 (= 1:1.1.8-1+b3), libfreetype-dev (= 2.14.3+dfsg-2), libfreetype6 (= 2.14.3+dfsg-2), libfreexl-dev (= 2.0.0-1+b4), libfreexl1 (= 2.0.0-1+b4), libfribidi0 (= 1.0.16-5+b1), libfuse3-4 (= 3.18.3-1), libfyba-dev (= 4.1.1-11+b2), libfyba0t64 (= 4.1.1-11+b2), libgav1-2 (= 0.20.0-2+b2), libgbm1 (= 26.2.3-2), libgcc-15-dev (= 15.3.0-4), libgcc-16-dev (= 16.2.0-3), libgcc-s1 (= 16.2.0-3), libgcrypt20 (= 1.12.3-2), libgd3 (= 2.3.3-14), libgdal-dev (= 3.13.3+dfsg-1+b1), libgdal39 (= 3.13.3+dfsg-1+b1), libgdbm-compat4t64 (= 1.26-1+b2), libgdbm6t64 (= 1.26-1+b2), libgdk-pixbuf-2.0-0 (= 2.44.8+dfsg-1), libgdk-pixbuf2.0-common (= 2.44.8+dfsg-1), libgeos-c1t64 (= 3.15.0-1), libgeos-dev (= 3.15.0-1), libgeos3.15.0 (= 3.15.0-1), libgeotiff-dev (= 1.7.4-2), libgeotiff5 (= 1.7.4-2), libgfortran-16-dev (= 16.2.0-3), libgfortran5 (= 16.2.0-3), libgif-dev (= 6.1.3-1), libgif7 (= 6.1.3-1), libgl-dev (= 1.7.0-3+b1), libgl1 (= 1.7.0-3+b1), libgl1-mesa-dri (= 26.2.3-2), libgl2ps-dev (= 1.4.2+dfsg1-4+b1), libgl2ps1.4 (= 1.4.2+dfsg1-4+b1), libglew-common-dev (= 2.3.1+dfsg2-5), libglew-dev (= 2.3.1+dfsg2-5), libglew2.3 (= 2.3.1+dfsg2-5), libglib2.0-0t64 (= 2.90.0-1), libglu1-mesa (= 9.0.2-1.1+b4), libglu1-mesa-dev (= 9.0.2-1.1+b4), libglvnd0 (= 1.7.0-3+b1), libglx-dev (= 1.7.0-3+b1), libglx-mesa0 (= 26.2.3-2), libglx0 (= 1.7.0-3+b1), libglycin-2-0 (= 2.2.1+ds-2), libgme0 (= 0.6.5-1), libgmp-dev (= 2:6.3.0+dfsg-5+b2), libgmp10 (= 2:6.3.0+dfsg-5+b2), libgmpxx4ldbl (= 2:6.3.0+dfsg-5+b2), libgnutls-dane0t64 (= 3.8.13-1), libgnutls28-dev (= 3.8.13-1), libgnutls30t64 (= 3.8.13-1), libgomp1 (= 16.2.0-3), libgpg-error-dev (= 1.61-5), libgpg-error0 (= 1.61-5), libgpgme-dev (= 2.2.0-2), libgpgme45 (= 2.2.0-2), libgpgmepp-dev (= 2.2.0-2), libgpgmepp7 (= 2.2.0-2), libgprofng0 (= 2.47-6), libgraphite2-3 (= 1.3.15-2), libgsm1 (= 1.0.24-1), libgssapi-krb5-2 (= 1.22.1-3), libgssrpc4t64 (= 1.22.1-3), libgtk-3-0t64 (= 3.24.52-1), libgtk-3-common (= 3.24.52-1), libgudev-1.0-0 (= 238-7+b2), libgvc7 (= 14.1.2-1+b4), libgvplugin-gd8 (= 14.1.2-1+b4), libgvplugin-pango8 (= 14.1.2-1+b4), libgvpr2 (= 14.1.2-1+b4), libharfbuzz-subset0 (= 12.3.2-2+b2), libharfbuzz0b (= 12.3.2-2+b2), libhdf4-0 (= 4.3.1-3), libhdf4-dev (= 4.3.1-3), libhdf5-320 (= 2.2.0+repack-5), libhdf5-cpp-320 (= 2.2.0+repack-5), libhdf5-dev (= 2.2.0+repack-5), libhdf5-fortran-320 (= 2.2.0+repack-5), libhdf5-hl-320 (= 2.2.0+repack-5), libhdf5-hl-cpp-320 (= 2.2.0+repack-5), libhdf5-hl-fortran-320 (= 2.2.0+repack-5), libhdf5-mpi-dev (= 2.2.0+repack-5), libhdf5-openmpi-320 (= 2.2.0+repack-5), libhdf5-openmpi-cpp-320 (= 2.2.0+repack-5), libhdf5-openmpi-dev (= 2.2.0+repack-5), libhdf5-openmpi-fortran-320 (= 2.2.0+repack-5), libhdf5-openmpi-hl-320 (= 2.2.0+repack-5), libhdf5-openmpi-hl-cpp-320 (= 2.2.0+repack-5), libhdf5-openmpi-hl-fortran-320 (= 2.2.0+repack-5), libheif-dev (= 1.23.4-1+b1), libheif-plugin-dav1d (= 1.23.4-1+b1), libheif-plugin-libde265 (= 1.23.4-1+b1), libheif1 (= 1.23.4-1+b1), libhogweed6t64 (= 3.10.2-1+b1), libhsa-runtime64-1 (= 6.4.3+dfsg-5), libhunspell-1.7-0 (= 1.7.3+really1.7.3-5), libhwasan0 (= 16.2.0-3), libhwloc-dev (= 2.15.0-2), libhwloc-plugins (= 2.15.0-2), libhwloc15 (= 2.15.0-2), libhwy-dev (= 1.3.0-5.1), libhwy1t64 (= 1.3.0-5.1), libibmad5 (= 65.0-1), libibumad3 (= 65.0-1), libibverbs-dev (= 65.0-1), libibverbs1 (= 65.0-1), libice-dev (= 2:1.1.1-1+b2), libice6 (= 2:1.1.1-1+b2), libicu-dev (= 78.3-2), libicu78 (= 78.3-2), libidn2-0 (= 2.3.8-5), libidn2-dev (= 2.3.8-5), libimagequant0 (= 4.4.1-1+b2), libinput-bin (= 1.31.3-1), libinput10 (= 1.31.3-1), libisl23 (= 0.28-1), libitm1 (= 16.2.0-3), libjansson4 (= 2.15.1-1), libjbig-dev (= 2.1-6.1+b3), libjbig0 (= 2.1-6.1+b3), libjpeg-dev (= 1:3.1.3-4), libjpeg62-turbo (= 1:3.1.3-4), libjpeg62-turbo-dev (= 1:3.1.3-4), libjs-jquery (= 3.7.1+dfsg+~3.5.33-1), libjs-jquery-ui (= 1.14.2+dfsg-1), libjs-mathjax (= 2.7.9+dfsg-1), libjs-sphinxdoc (= 9.1.0-8), libjs-underscore (= 1.13.8~dfsg+~1.13.0-1), libjson-c-dev (= 0.19+ds-1), libjson-c5 (= 0.19+ds-1), libjson-perl (= 4.10000-1), libjsoncpp-dev (= 1.9.8-2), libjsoncpp26 (= 1.9.8-2), libjxl-dev (= 0.11.2-5.1), libjxl0.11 (= 0.11.2-5.1), libk5crypto3 (= 1.22.1-3), libkadm5clnt-mit12 (= 1.22.1-3), libkadm5srv-mit12 (= 1.22.1-3), libkdb5-10t64 (= 1.22.1-3), libkeyutils1 (= 1.6.3-6+b2), libkim-api-dev (= 2.4.1-3+b2), libkim-api2 (= 2.4.1-3+b2), libkpathsea6 (= 2026.20260303.78225+ds-5), libkrb5-3 (= 1.22.1-3), libkrb5-dev (= 1.22.1-3), libkrb5support0 (= 1.22.1-3), libksba8 (= 1.8.1-1), liblapack-dev (= 3.12.1-8), liblapack3 (= 3.12.1-8), liblcms2-2 (= 2.19.1-1), liblcms2-dev (= 2.19.1-1), libldap-dev (= 2.6.14+dfsg-2+b1), libldap2 (= 2.6.14+dfsg-2+b1), liblerc-dev (= 4.2.0+ds-1), liblerc4 (= 4.2.0+ds-1), libllvm21 (= 1:21.1.8-13), libllvm22 (= 1:22.1.8-1+b2), liblsan0 (= 16.2.0-3), libltdl-dev (= 2.6.2-3), libltdl7 (= 2.6.2-3), liblz4-1 (= 1.10.0-10), liblz4-dev (= 1.10.0-10), liblzma-dev (= 5.8.4-1), liblzma5 (= 5.8.4-1), libmagic-mgc (= 1:5.47-4), libmagic1t64 (= 1:5.47-4), libmariadb-dev (= 1:11.8.9+ds-4), libmariadb-dev-compat (= 1:11.8.9+ds-4), libmariadb3 (= 1:11.8.9+ds-4), libmd0 (= 1.2.0-2), libmd4c0 (= 0.5.3-1), libminizip-dev (= 1:1.3.dfsg+really1.3.2-3), libminizip1t64 (= 1:1.3.dfsg+really1.3.2-3), libmount1 (= 2.42.4-1), libmp3lame0 (= 4.0-1), libmpc3 (= 1.3.1-3), libmpfi0 (= 1.5.4+ds-5), libmpfr6 (= 4.2.2-3), libmpg123-0t64 (= 1.33.7-1), libmtdev1t64 (= 1.1.7-1+b2), libmuparser-dev (= 2.3.4-2+b1), libmuparser2v5 (= 2.3.4-2+b1), libncursesw6 (= 6.6+20260608-2), libnetcdf-dev (= 1:4.10.1-1+b1), libnetcdf22 (= 1:4.10.1-1+b1), libnettle8t64 (= 3.10.2-1+b1), libnghttp2-14 (= 1.70.0-1), libnghttp2-dev (= 1.70.0-1), libnghttp3-9 (= 1.17.0-1), libnghttp3-dev (= 1.17.0-1), libngtcp2-16 (= 1.24.0-1), libngtcp2-crypto-gnutls-dev (= 1.24.0-1), libngtcp2-crypto-gnutls8 (= 1.24.0-1), libngtcp2-crypto-ossl0 (= 1.24.0-1), libngtcp2-dev (= 1.24.0-1), libnl-3-200 (= 3.12.0-2+b1), libnl-3-dev (= 3.12.0-2+b1), libnl-route-3-200 (= 3.12.0-2+b1), libnl-route-3-dev (= 3.12.0-2+b1), libnorm1t64 (= 1.5.9+dfsg-4+b1), libnpth0t64 (= 1.8-4), libnspr4 (= 2:4.40-1), libnspr4-dev (= 2:4.40-1), libnss3 (= 2:3.129-1), libnss3-dev (= 2:3.129-1), libnuma-dev (= 2.0.19-1+b2), libnuma1 (= 2.0.19-1+b2), libodbc2 (= 2.3.14-2), libodbccr2 (= 2.3.14-2), libodbcinst2 (= 2.3.14-2), libogg-dev (= 1.3.6-2+b1), libogg0 (= 1.3.6-2+b1), libopengl-dev (= 1.7.0-3+b1), libopengl0 (= 1.7.0-3+b1), libopenjp2-7 (= 2.5.4-1.1), libopenjp2-7-dev (= 2.5.4-1.1), libopenmpi-dev (= 5.0.11-2), libopenmpi40 (= 5.0.11-2), libopenmpt0t64 (= 0.8.9-1), libopus0 (= 1.6.1-1+b1), libp11-kit-dev (= 0.26.5-1), libp11-kit0 (= 0.26.5-1), libpam-modules (= 1.7.0-8), libpam-modules-bin (= 1.7.0-8), libpam-runtime (= 1.7.0-8), libpam-systemd (= 262-1), libpam0g (= 1.7.0-8), libpango-1.0-0 (= 1.58.0-1), libpangocairo-1.0-0 (= 1.58.0-1), libpangoft2-1.0-0 (= 1.58.0-1), libpaper-utils (= 2.2.5-0.4), libpaper2 (= 2.2.5-0.4), libpathplan4 (= 14.1.2-1+b4), libpciaccess0 (= 0.19-2), libpcre2-16-0 (= 10.48-3), libpcre2-32-0 (= 10.48-3), libpcre2-8-0 (= 10.48-3), libpcre2-dev (= 10.48-3), libpcre2-posix3 (= 10.48-3), libpcsclite1 (= 2.5.2-1), libpdfbox-java (= 1:1.8.16-5), libperl5.44 (= 5.44.0-1), libpgm-5.3-0t64 (= 5.3.128~dfsg-3), libpipeline1 (= 1.5.8-3), libpixman-1-0 (= 0.46.4-1+b2), libpkgconf7 (= 2.5.1-4), libpmix2t64 (= 7.0.0~git.20260918-1), libpnetcdf-dev (= 1.15.0-3), libpnetcdf8 (= 1.15.0-3), libpng-dev (= 1.6.58-1), libpng16-16t64 (= 1.6.58-1), libpoppler-dev (= 26.07.0-2), libpoppler-private-dev (= 26.07.0-2), libpoppler162 (= 26.07.0-2), libpotrace0 (= 1.16-2+b3), libpq-dev (= 18.6-3+b1), libpq5 (= 18.6-3+b1), libproc2-1 (= 2:4.0.7-1), libproj-dev (= 9.8.1-1), libproj25 (= 9.8.1-1), libproxy1v5 (= 0.5.12-3), libprrte-bin (= 5.0.0~git.20260918.1-2), libprrte-dev (= 5.0.0~git.20260918.1-2), libprrte4 (= 5.0.0~git.20260918.1-2), libpsl-dev (= 0.23.3-1), libpsl5t64 (= 0.23.3-1), libpsm2-2 (= 11.2.185-2.1), libptexenc1 (= 2026.20260303.78225+ds-5), libpugixml1v5 (= 1.16-1), libpython3-all-dev (= 3.14.7-3), libpython3-dev (= 3.14.7-3), libpython3-stdlib (= 3.14.7-3), libpython3.14 (= 3.14.7-4), libpython3.14-dev (= 3.14.7-4), libpython3.14-minimal (= 3.14.7-4), libpython3.14-stdlib (= 3.14.7-4), libqhull-dev (= 2020.2-9), libqhull-r8.0 (= 2020.2-9), libqhull8.0 (= 2020.2-9), libqhullcpp8.0 (= 2020.2-9), libqt6concurrent6 (= 6.11.2+dfsg-5), libqt6core6t64 (= 6.11.2+dfsg-5), libqt6dbus6 (= 6.11.2+dfsg-5), libqt6gui6 (= 6.11.2+dfsg-5), libqt6network6 (= 6.11.2+dfsg-5), libqt6opengl6 (= 6.11.2+dfsg-5), libqt6openglwidgets6 (= 6.11.2+dfsg-5), libqt6printsupport6 (= 6.11.2+dfsg-5), libqt6sql6 (= 6.11.2+dfsg-5), libqt6test6 (= 6.11.2+dfsg-5), libqt6waylandclient6 (= 6.11.2+dfsg-5), libqt6widgets6 (= 6.11.2+dfsg-5), libqt6wlshellintegration6 (= 6.11.2+dfsg-5), libqt6xml6 (= 6.11.2+dfsg-5), libquadmath0 (= 16.2.0-3), librabbitmq4 (= 0.18.0-1), librav1e-dev (= 0.8.1-11), librav1e0.8 (= 0.8.1-11), librdmacm1t64 (= 65.0-1), libreadline8t64 (= 8.3-4), librhash1 (= 1.4.6-1.1+b1), librist4 (= 0.2.20+dfsg-1), librsvg2-2 (= 2.62.1+dfsg-1), librtmp-dev (= 2.6-1), librtmp1 (= 2.6-1), librttopo-dev (= 1.1.0-4+b2), librttopo1 (= 1.1.0-4+b2), libsasl2-2 (= 2.1.28+dfsg1-11), libsasl2-modules-db (= 2.1.28+dfsg1-11), libseccomp2 (= 2.6.1-1+b1), libselinux1 (= 3.11-2.1), libsensors-config (= 1:3.6.2-2), libsensors5 (= 1:3.6.2-2+b2), libsframe3 (= 2.47-6), libsharpyuv-dev (= 1.6.0-0.1), libsharpyuv0 (= 1.6.0-0.1), libshine3 (= 3.1.1-4), libsm-dev (= 2:1.2.6-1+b2), libsm6 (= 2:1.2.6-1+b2), libsmartcols1 (= 2.42.4-1), libsnappy1v5 (= 1.3.1-3), libsodium26 (= 1.0.22-2), libsoxr0 (= 0.1.3-4.1+b1), libspatialite-dev (= 5.1.0-4), libspatialite8t64 (= 5.1.0-4), libspdlog1.15 (= 1:1.15.3+ds-1+b2), libspeex1 (= 1.2.1-3+b2), libsqlite3-0 (= 3.53.4-2), libsqlite3-dev (= 3.53.4-2), libsrt1.5-gnutls (= 1.5.7-1), libssh-4 (= 0.12.2-1), libssh2-1-dev (= 1.11.1-6), libssh2-1t64 (= 1.11.1-6), libssl-dev (= 3.6.4-1), libssl3t64 (= 3.6.4-1), libstdc++-16-dev (= 16.2.0-3), libstdc++6 (= 16.2.0-3), libsuperlu-dev (= 7.0.1+dfsg1-2+b2), libsuperlu7 (= 7.0.1+dfsg1-2+b2), libsvtav1enc-dev (= 4.1.0+dfsg-1), libsvtav1enc4 (= 4.1.0+dfsg-1), libswresample-dev (= 7:9.0.2-1), libswresample7 (= 7:9.0.2-1), libswscale-dev (= 7:9.0.2-1), libswscale10 (= 7:9.0.2-1), libsymspg-dev (= 2.7.0-1+b2), libsymspg2 (= 2.7.0-1+b2), libsynctex2 (= 2026.20260303.78225+ds-5), libsystemd-shared (= 262-1), libsystemd0 (= 262-1), libsz2 (= 1.1.7-1), libtasn1-6 (= 4.21.0-2+b1), libtasn1-6-dev (= 4.21.0-2+b1), libtbb-dev (= 2023.1.0-3), libtbb12 (= 2023.1.0-3), libtbbbind-2-5 (= 2023.1.0-3), libtbbmalloc2 (= 2023.1.0-3), libteckit0 (= 2.5.13+ds-2), libtexlua53-5 (= 2026.20260303.78225+ds-5), libtext-charwidth-perl (= 0.04-12+b2), libtext-iconv-perl (= 1.7-9+b2), libtext-wrapi18n-perl (= 0.06-11), libthai-data (= 0.1.30-3), libthai0 (= 0.1.30-3), libtheora-dev (= 1.2.0+dfsg-6+b2), libtheora1 (= 1.2.0+dfsg-6+b2), libtheoradec2 (= 1.2.0+dfsg-6+b2), libtheoraenc2 (= 1.2.0+dfsg-6+b2), libtiff-dev (= 4.7.2-1), libtiff6 (= 4.7.2-1), libtiffxx6 (= 4.7.2-1), libtinfo6 (= 6.6+20260608-2), libtool (= 2.6.2-3), libts0t64 (= 1.22-1.1+b2), libtsan2 (= 16.2.0-3), libtwolame0 (= 0.4.0-3), libubsan1 (= 16.2.0-3), libucc1 (= 1.9.0-1), libuchardet0 (= 0.0.8-2+b2), libucx0 (= 1.22.0-1), libudev1 (= 262-1), libudfread3 (= 1.2.0-3), libunbound8 (= 1.26.1-1), libunistring-dev (= 1.4.2-1), libunistring5 (= 1.4.2-1), liburing2 (= 2.15-1), liburiparser-dev (= 1.0.1+dfsg-1), liburiparser1 (= 1.0.1+dfsg-1), libutfcpp-dev (= 4.2.1-1), libuuid1 (= 2.42.4-1), libuv1t64 (= 1.52.1-4), libva-drm2 (= 2.24.1-2), libva-x11-2 (= 2.24.1-2), libva2 (= 2.24.1-2), libvdpau1 (= 1.5-4+b1), libvorbis0a (= 1.3.7-3+b2), libvorbisenc2 (= 1.3.7-3+b2), libvorbisfile3 (= 1.3.7-3+b2), libvoro++1 (= 0.5+revert-to-0.4.6+dfsg1-1), libvpl2 (= 1:2.17.0-1), libvpx12 (= 1.17.0-1), libvtk9-dev (= 9.6.2+dfsg1-6+b1), libvtk9-java (= 9.6.2+dfsg1-6+b1), libvtk9-qt-dev (= 9.6.2+dfsg1-6+b1), libvtk9.6 (= 9.6.2+dfsg1-6+b1), libvtk9.6-qt (= 9.6.2+dfsg1-6+b1), libvulkan-dev (= 1.4.357.0-1), libvulkan1 (= 1.4.357.0-1), libwacom-common (= 2.20.0-1), libwacom9 (= 2.20.0-1), libwayland-client0 (= 1.26.0-1), libwayland-cursor0 (= 1.26.0-1), libwayland-egl1 (= 1.26.0-1), libwebp-dev (= 1.6.0-0.1), libwebp7 (= 1.6.0-0.1), libwebpdecoder3 (= 1.6.0-0.1), libwebpdemux2 (= 1.6.0-0.1), libwebpmux3 (= 1.6.0-0.1), libx11-6 (= 2:1.8.13-1), libx11-data (= 2:1.8.13-1), libx11-dev (= 2:1.8.13-1), libx11-xcb1 (= 2:1.8.13-1), libx264-165 (= 2:0.165.3223+git20250910.0480cb0-1+b1), libx265-216 (= 4.2-3), libxapian30 (= 1.4.32-1), libxau-dev (= 1:1.0.11-1+b2), libxau6 (= 1:1.0.11-1+b2), libxaw7 (= 2:1.0.16-1+b2), libxcb-cursor0 (= 0.1.6-1), libxcb-dri3-0 (= 1.17.0-2+b2), libxcb-glx0 (= 1.17.0-2+b2), libxcb-icccm4 (= 0.4.2-1+b2), libxcb-image0 (= 0.4.0-2+b3), libxcb-keysyms1 (= 0.4.1-1+b2), libxcb-present0 (= 1.17.0-2+b2), libxcb-randr0 (= 1.17.0-2+b2), libxcb-render-util0 (= 0.3.10-1+b2), libxcb-render0 (= 1.17.0-2+b2), libxcb-shape0 (= 1.17.0-2+b2), libxcb-shm0 (= 1.17.0-2+b2), libxcb-sync1 (= 1.17.0-2+b2), libxcb-util1 (= 0.4.1-1+b2), libxcb-xfixes0 (= 1.17.0-2+b2), libxcb-xinput0 (= 1.17.0-2+b2), libxcb-xkb1 (= 1.17.0-2+b2), libxcb1 (= 1.17.0-2+b2), libxcb1-dev (= 1.17.0-2+b2), libxcomposite1 (= 1:0.4.6-1+b2), libxcursor-dev (= 1:1.2.3-1+b2), libxcursor1 (= 1:1.2.3-1+b2), libxdamage1 (= 1:1.1.7-1+b1), libxdmcp-dev (= 1:1.1.5-2+b1), libxdmcp6 (= 1:1.1.5-2+b1), libxdot4 (= 14.1.2-1+b4), libxerces-c-dev (= 3.2.4+debian-1.3+b4), libxerces-c3.2t64 (= 3.2.4+debian-1.3+b4), libxext-dev (= 2:1.3.4-1+b4), libxext6 (= 2:1.3.4-1+b4), libxfixes-dev (= 1:6.0.0-2+b5), libxfixes3 (= 1:6.0.0-2+b5), libxft-dev (= 2.3.6-1+b5), libxft2 (= 2.3.6-1+b5), libxi6 (= 2:1.8.3-1), libxinerama1 (= 2:1.1.4-3+b5), libxkbcommon-x11-0 (= 1.13.1-1), libxkbcommon0 (= 1.13.1-1), libxml2-16 (= 2.15.4+dfsg-1), libxml2-dev (= 2.15.4+dfsg-1), libxmu6 (= 2:1.1.3-4+b1), libxnvctrl0 (= 535.171.04-1+b3), libxpm4 (= 1:3.5.19-1), libxrandr2 (= 2:1.5.4-1+b4), libxrender-dev (= 1:0.9.12-1+b2), libxrender1 (= 1:0.9.12-1+b2), libxres1 (= 2:1.2.1-2), libxshmfence1 (= 1.3.3-1+b2), libxss-dev (= 1:1.2.3-1+b4), libxss1 (= 1:1.2.3-1+b4), libxt-dev (= 1:1.2.1-1.3+b2), libxt6t64 (= 1:1.2.1-1.3+b2), libxtst6 (= 2:1.2.5-1+b2), libxvidcore4 (= 2:1.3.7-3+b2), libxxf86vm1 (= 1:1.1.4-2+b1), libxxhash-dev (= 0.8.3-2+b2), libxxhash0 (= 0.8.3-2+b2), libyaml-cpp0.9 (= 0.9.0+dfsg-9), libyuv-dev (= 0.0.1971.20260904-2), libyuv0 (= 0.0.1971.20260904-2), libz3-4 (= 4.13.3-1.1), libze1 (= 1.32.0-1), libzfp1t64 (= 1.0.1-5+b1), libzmq5 (= 4.3.5-1+b7), libzstd-dev (= 1.5.7+dfsg-4), libzstd1 (= 1.5.7+dfsg-4), libzvbi-common (= 0.2.45-1), libzvbi0t64 (= 0.2.45-1), libzzip-0-13t64 (= 0.13.78+dfsg.1-0.2+b1), linux-libc-dev (= 7.2.7-1), m4 (= 1.4.21-1), make (= 4.4.1-3), man-db (= 2.13.1-1), mariadb-common (= 1:11.8.9+ds-4), mawk (= 1.3.4.20260302-2), media-types (= 14.0.0), mesa-libgallium (= 26.2.3-2), mpi-default-bin (= 1.20), mpi-default-dev (= 1.20), mysql-common (= 5.8+1.1.1), ncurses-base (= 6.6+20260608-2), ncurses-bin (= 6.6+20260608-2), netbase (= 6.6), nettle-dev (= 3.10.2-1+b1), nlohmann-json3-dev (= 3.12.0.really.3.12.0.really.3.11.3-3), ocl-icd-libopencl1 (= 2.3.4-1+b1), ocl-icd-opencl-dev (= 2.3.4-1+b1), opencl-c-headers (= 3.0~2025.07.22-2), opencl-clhpp-headers (= 3.0~2025.07.22-1), openjdk-25-jdk (= 25.0.5~7ea-1), openjdk-25-jdk-headless (= 25.0.5~7ea-1), openjdk-25-jre (= 25.0.5~7ea-1), openjdk-25-jre-headless (= 25.0.5~7ea-1), openmpi-bin (= 5.0.11-2), openmpi-common (= 5.0.11-2), openssh-client (= 1:10.5p1-1), openssh-common (= 1:10.5p1-1), openssl (= 3.6.4-1), openssl-provider-legacy (= 3.6.4-1), patch (= 2.8-2), pci.ids (= 0.0~2026.09.23-1), perl (= 5.44.0-1), perl-base (= 5.44.0-1), perl-modules-5.44 (= 5.44.0-1), pinentry-curses (= 1.3.3-3), pkgconf (= 2.5.1-4), pkgconf-bin (= 2.5.1-4), po-debconf (= 1.0.22), preview-latex-style (= 13.2-1.1), procps (= 2:4.0.7-1), proj-data (= 9.8.1-1), prrte-common (= 5.0.0~git.20260918.1-2), pybuild-plugin-pyproject (= 7.20260623), python-babel-localedata (= 2.18.0+git2026-08-12-2), python3 (= 3.14.7-3), python3-alabaster (= 1.0.0-2), python3-all (= 3.14.7-3), python3-all-dev (= 3.14.7-3), python3-astroid (= 4.3.1-3), python3-asttokens (= 3.0.1-3), python3-autocommand (= 2.2.2-4), python3-babel (= 2.18.0+git2026-08-12-2), python3-breathe (= 4.36.0-2), python3-build (= 1.5.1-1), python3-certifi (= 2026.7.22+ds-1), python3-chardet (= 5.2.0+dfsg-2), python3-charset-normalizer (= 3.4.7-2+b1), python3-decorator (= 5.3.1-1), python3-defusedxml (= 0.7.1-3), python3-dev (= 3.14.7-3), python3-docutils (= 0.23+dfsg-2), python3-enchant (= 3.3.0-1), python3-executing (= 2.2.1-0.1), python3-idna (= 3.19-1), python3-imagesize (= 2.0.1-1), python3-installer (= 1.0.1+dfsg1-3), python3-ipython (= 9.11.0-3), python3-ipython-pygments-lexers (= 1.1.1-3), python3-jaraco.context (= 6.0.1-2), python3-jaraco.functools (= 4.1.0-1), python3-jedi (= 0.20.0+ds1-1), python3-jinja2 (= 3.1.6-4), python3-markupsafe (= 3.0.3-2+b1), python3-matplotlib-inline (= 0.2.1-1), python3-minimal (= 3.14.7-3), python3-more-itertools (= 11.1.0-3), python3-mpi4py (= 4.1.2-1+b1), python3-packaging (= 26.2-3), python3-parso (= 0.8.7-1), python3-pexpect (= 4.9-5), python3-pip-whl (= 26.1.2+dfsg-1), python3-prompt-toolkit (= 3.0.53-2), python3-ptyprocess (= 0.7.0-7), python3-pure-eval (= 0.2.3-2), python3-pygments (= 2.20.0+dfsg-2), python3-pyproject-hooks (= 1.2.0-2), python3-requests (= 2.34.2-1), python3-roman-numerals (= 4.1.0-1), python3-setuptools (= 84.0.0-2), python3-setuptools-whl (= 84.0.0-2), python3-snowballstemmer (= 3.1.1-1), python3-sphinx (= 9.1.0-8), python3-sphinx-design (= 0.7.0-5), python3-sphinx-tabs (= 3.4.7-3), python3-sphinxcontrib.jquery (= 4.1-7), python3-sphinxcontrib.spelling (= 8.0.2-1), python3-stack-data (= 0.6.3-4), python3-traitlets (= 5.16.1-1), python3-typeshed (= 0.0~git20260204.516eed0-2), python3-typing-extensions (= 4.16.0-5), python3-urllib3 (= 2.8.0-1), python3-venv (= 3.14.7-3), python3-vtk9 (= 9.6.2+dfsg1-6+b1), python3-wcwidth (= 0.8.3+dfsg1-1), python3-wheel (= 0.47.0-1), python3-zipp (= 3.23.0-2), python3.14 (= 3.14.7-4), python3.14-dev (= 3.14.7-4), python3.14-minimal (= 3.14.7-4), python3.14-venv (= 3.14.7-4), qmake6 (= 6.11.2+dfsg-5), qmake6-bin (= 6.11.2+dfsg-5), qt6-base-dev (= 6.11.2+dfsg-5), qt6-base-dev-tools (= 6.11.2+dfsg-5), qt6-qpa-plugins (= 6.11.2+dfsg-5), qtpaths6 (= 6.11.2+dfsg-5), qtpaths6-bin (= 6.11.2+dfsg-5), readline-common (= 8.3-4), sed (= 4.9-3), sensible-utils (= 0.0.26), sgml-base (= 1.31+nmu1), shared-mime-info (= 2.4-5+b3), sphinx-common (= 9.1.0-8), sphinx-rtd-theme-common (= 3.1.0+dfsg-3), systemd (= 262-1), systemd-sysv (= 262-1), sysvinit-utils (= 3.18-1), t1utils (= 1.41-4), tar (= 1.35+dfsg-6), tex-common (= 6.20), tex-gyre (= 20180621-8), texlive-base (= 2026.20260911-1), texlive-binaries (= 2026.20260303.78225+ds-5), texlive-fonts-recommended (= 2026.20260911-1), texlive-latex-base (= 2026.20260911-1), texlive-latex-extra (= 2026.20260911-1), texlive-latex-recommended (= 2026.20260911-1), texlive-pictures (= 2026.20260911-1), tzdata (= 2026c-1), ucf (= 3.0056), unixodbc-common (= 2.3.14-2), unixodbc-dev (= 2.3.14-2), util-linux (= 2.42.4-1), uuid-dev (= 2.42.4-1), voro++-dev (= 0.5+revert-to-0.4.6+dfsg1-1), vtk9 (= 9.6.2+dfsg1-6+b1), x11-common (= 1:7.7+26), x11proto-dev (= 2025.1-1), xdg-utils (= 1.2.1-2), xfonts-encodings (= 1:1.0.4-2.2), xfonts-utils (= 1:7.7+7), xkb-data (= 2.48-1), xml-core (= 0.21), xorg-sgml-doctools (= 1:1.12.1-1), xtrans-dev (= 1.6.0-1), xz-utils (= 5.8.4-1), zlib1g (= 1:1.3.dfsg+really1.3.2-3), zlib1g-dev (= 1:1.3.dfsg+really1.3.2-3) Environment: DEB_BUILD_OPTIONS="parallel=2" LANG="C.UTF-8" LANGUAGE="en_GB:en" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" LD_LIBRARY_PATH="/usr/lib/libeatmydata" LD_PRELOAD="libeatmydata.so" SOURCE_DATE_EPOCH="1790370018" +------------------------------------------------------------------------------+ | Package contents Sat, 26 Sep 2026 04:25:57 +0000 | +------------------------------------------------------------------------------+ lammps-data_20260704+dfsg-2_all.deb ----------------------------------- new Debian package, version 2.0. size 10143152 bytes: control archive=7884 bytes. 1022 bytes, 24 lines control 22869 bytes, 288 lines md5sums Package: lammps-data Source: lammps Version: 20260704+dfsg-2 Architecture: all Maintainer: Debian Science Maintainers Installed-Size: 57373 Section: doc Priority: optional Multi-Arch: foreign Homepage: https://lammps.sandia.gov/ Description: Molecular Dynamics Simulator. Data (potentials) LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator. . LAMMPS has potentials for soft materials (biomolecules, polymers) and solid-state materials (metals, semiconductors) and coarse-grained or mesoscopic systems. It can be used to model atoms or, more generically, as a parallel particle simulator at the atomic, meso, or continuum scale. . LAMMPS runs on single processors or in parallel using message-passing techniques and a spatial-decomposition of the simulation domain. The code is designed to be easy to modify or extend with new functionality. . The package contains data (potentials) drwxr-xr-x root/root 0 2026-09-25 21:00 ./ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/doc/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/doc/lammps-data/ -rw-r--r-- root/root 3382 2026-09-25 21:00 ./usr/share/doc/lammps-data/changelog.Debian.gz -rw-r--r-- root/root 24008 2026-09-25 21:00 ./usr/share/doc/lammps-data/copyright drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/emacs/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/emacs/site-lisp/ -rw-r--r-- root/root 6681 2026-09-01 05:07 ./usr/share/emacs/site-lisp/lammps-mode.el drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/ drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/potentials/ -rw-r--r-- root/root 36549 2026-09-01 05:07 ./usr/share/lammps/potentials/Ag_u3.eam -rw-r--r-- root/root 3026369 2026-09-01 05:07 ./usr/share/lammps/potentials/AlCu.adp -rw-r--r-- root/root 487738 2026-09-01 05:07 ./usr/share/lammps/potentials/AlCu.bop.table -rw-r--r-- root/root 298807 2026-09-01 05:07 ./usr/share/lammps/potentials/AlCu.eam.alloy -rw-r--r-- root/root 975942 2026-09-01 05:07 ./usr/share/lammps/potentials/AlCuH.bop.table -rw-r--r-- root/root 2268472 2026-09-01 05:07 ./usr/share/lammps/potentials/AlFe_mm.eam.fs -rw-r--r-- root/root 170699 2026-09-01 05:07 ./usr/share/lammps/potentials/AlO.eam.alloy -rw-r--r-- root/root 468 2026-09-01 05:07 ./usr/share/lammps/potentials/AlO.streitz -rw-r--r-- root/root 2313 2026-09-01 05:07 ./usr/share/lammps/potentials/AlSiMgCuFe.meam -rw-r--r-- root/root 2040968 2026-09-01 05:07 ./usr/share/lammps/potentials/Al_Batra_2019.agni -rw-r--r-- root/root 35756 2026-09-01 05:07 ./usr/share/lammps/potentials/Al_jnp.eam -rw-r--r-- root/root 840424 2026-09-01 05:07 ./usr/share/lammps/potentials/Al_jpc.agni -rw-r--r-- root/root 756379 2026-09-01 05:07 ./usr/share/lammps/potentials/Al_mm.eam.fs -rw-r--r-- root/root 279929 2026-09-01 05:07 ./usr/share/lammps/potentials/Al_prb.agni -rw-r--r-- root/root 710424 2026-09-01 05:07 ./usr/share/lammps/potentials/Al_zhou.eam.alloy -rw-r--r-- root/root 36548 2026-09-01 05:07 ./usr/share/lammps/potentials/Au_u3.eam -rw-r--r-- root/root 6592 2026-09-01 05:07 ./usr/share/lammps/potentials/BN.extep -rw-r--r-- root/root 5614 2026-09-01 05:07 ./usr/share/lammps/potentials/BNC.tersoff -rw-r--r-- root/root 2050 2026-09-01 05:07 ./usr/share/lammps/potentials/BNCH-old.ILP -rw-r--r-- root/root 2439 2026-09-01 05:07 ./usr/share/lammps/potentials/BNCH.ILP -rw-r--r-- root/root 1985 2026-09-01 05:07 ./usr/share/lammps/potentials/BNC_MBD_bulk.ILP -rw-r--r-- root/root 1979 2026-09-01 05:07 ./usr/share/lammps/potentials/BNC_TS_bulk.ILP -rw-r--r-- root/root 330 2026-09-01 05:07 ./usr/share/lammps/potentials/Bi.meam -rw-r--r-- root/root 862 2026-09-01 05:07 ./usr/share/lammps/potentials/C.drip -rw-r--r-- root/root 4000 2026-09-01 05:07 ./usr/share/lammps/potentials/C.lcbop -rw-r--r-- root/root 4941 2026-09-01 05:07 ./usr/share/lammps/potentials/CBNOH.aip.water.2dm -rw-r--r-- root/root 350 2026-09-01 05:07 ./usr/share/lammps/potentials/CC.KC -rw-r--r-- root/root 333 2026-09-01 05:07 ./usr/share/lammps/potentials/CC.KC-full -rw-r--r-- root/root 927 2026-09-01 05:07 ./usr/share/lammps/potentials/CC.Lebedeva -rw-r--r-- root/root 487719 2026-09-01 05:07 ./usr/share/lammps/potentials/CCu_v2.bop.table -rw-r--r-- root/root 833 2026-09-01 05:07 ./usr/share/lammps/potentials/CH.KC -rw-r--r-- root/root 926706 2026-09-01 05:07 ./usr/share/lammps/potentials/CH.airebo -rw-r--r-- root/root 927426 2026-09-01 05:07 ./usr/share/lammps/potentials/CH.airebo-bc -rw-r--r-- root/root 926959 2026-09-01 05:07 ./usr/share/lammps/potentials/CH.airebo-m -rw-r--r-- root/root 926698 2026-09-01 05:07 ./usr/share/lammps/potentials/CH.rebo -rw-r--r-- root/root 1882 2026-09-01 05:07 ./usr/share/lammps/potentials/CHAu.ILP -rw-r--r-- root/root 895 2026-09-01 05:07 ./usr/share/lammps/potentials/CH_taper.KC -rw-r--r-- root/root 2599 2026-09-01 05:07 ./usr/share/lammps/potentials/COH.DMC.aip.water.2dm -rw-r--r-- root/root 115738 2026-09-01 05:07 ./usr/share/lammps/potentials/C_SNAP_2021.10.15.quadratic.snapcoeff -rw-r--r-- root/root 131 2026-09-01 05:07 ./usr/share/lammps/potentials/C_SNAP_2021.10.15.quadratic.snapparam -rw-r--r-- root/root 390031 2026-09-01 05:07 ./usr/share/lammps/potentials/CdTe.bop.table -rw-r--r-- root/root 2177 2026-09-01 05:07 ./usr/share/lammps/potentials/CdTe.sw -rw-r--r-- root/root 847513 2026-09-01 05:07 ./usr/share/lammps/potentials/CdTeSe.bop.table -rw-r--r-- root/root 780327 2026-09-01 05:07 ./usr/share/lammps/potentials/CdTeZn.bop.table -rw-r--r-- root/root 38476 2026-09-01 05:07 ./usr/share/lammps/potentials/CdTeZnSeHgS0.sw -rw-r--r-- root/root 849938 2026-09-01 05:07 ./usr/share/lammps/potentials/CdZnTe_v1.bop.table -rw-r--r-- root/root 845127 2026-09-01 05:07 ./usr/share/lammps/potentials/CdZnTe_v2.bop.table 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--------------------------------------- new Debian package, version 2.0. size 86536 bytes: control archive=536 bytes. 389 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: lammps-dbgsym Source: lammps Version: 20260704+dfsg-2 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian Science Maintainers Installed-Size: 103 Depends: lammps (= 20260704+dfsg-2) Section: debug Priority: optional Description: debug symbols for lammps Build-Ids: 6830028241bc0571358a7dc3bc20944e78aec831 drwxr-xr-x root/root 0 2026-09-25 21:00 ./ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/lib/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/lib/debug/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/lib/debug/.build-id/68/ -rw-r--r-- root/root 94504 2026-09-25 21:00 ./usr/lib/debug/.build-id/68/30028241bc0571358a7dc3bc20944e78aec831.debug drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/doc/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/doc/lammps-dbgsym -> lammps lammps-doc_20260704+dfsg-2_all.deb ---------------------------------- new Debian package, version 2.0. size 89936668 bytes: control archive=36408 bytes. 1099 bytes, 26 lines control 121262 bytes, 1485 lines md5sums Package: lammps-doc Source: lammps Version: 20260704+dfsg-2 Architecture: all Maintainer: Debian Science Maintainers Installed-Size: 140330 Depends: libjs-mathjax, libjs-jquery, libjs-underscore Recommends: lammps-examples Section: doc Priority: optional Multi-Arch: foreign Homepage: https://lammps.sandia.gov/ Description: Molecular Dynamics Simulator (documentation) LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator. . LAMMPS has potentials for soft materials (biomolecules, polymers) and solid-state materials (metals, semiconductors) and coarse-grained or mesoscopic systems. It can be used to model atoms or, more generically, as a parallel particle simulator at the atomic, meso, or continuum scale. . LAMMPS runs on single processors or in parallel using message-passing techniques and a spatial-decomposition of the simulation domain. The code is designed to be easy to modify or extend with new functionality. . 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./usr/share/doc/lammps/html/write_data.html -rw-r--r-- root/root 34183 2026-09-25 21:00 ./usr/share/doc/lammps/html/write_dump.html -rw-r--r-- root/root 30952 2026-09-25 21:00 ./usr/share/doc/lammps/html/write_molecule.html -rw-r--r-- root/root 29161 2026-09-25 21:00 ./usr/share/doc/lammps/html/write_restart.html lammps-examples_20260704+dfsg-2_all.deb --------------------------------------- new Debian package, version 2.0. size 59125520 bytes: control archive=87824 bytes. 1070 bytes, 26 lines control 366368 bytes, 3718 lines md5sums Package: lammps-examples Source: lammps Version: 20260704+dfsg-2 Architecture: all Maintainer: Debian Science Maintainers Installed-Size: 259253 Depends: perl:any Recommends: lammps Section: doc Priority: optional Multi-Arch: foreign Homepage: https://lammps.sandia.gov/ Description: Molecular Dynamics Simulator (examples) LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator. . LAMMPS has potentials for soft materials (biomolecules, polymers) and solid-state materials (metals, semiconductors) and coarse-grained or mesoscopic systems. It can be used to model atoms or, more generically, as a parallel particle simulator at the atomic, meso, or continuum scale. . LAMMPS runs on single processors or in parallel using message-passing techniques and a spatial-decomposition of the simulation domain. The code is designed to be easy to modify or extend with new functionality. . The package contains example scripts and benchmarks. drwxr-xr-x root/root 0 2026-09-25 21:00 ./ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/doc/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/doc/lammps-examples/ -rw-r--r-- root/root 3381 2026-09-25 21:00 ./usr/share/doc/lammps-examples/changelog.Debian.gz -rw-r--r-- root/root 24008 2026-09-25 21:00 ./usr/share/doc/lammps-examples/copyright lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/doc/lammps-examples/examples -> ../../lammps/examples drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/ drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/bench/ -rw-r--r-- root/root 36575 2026-09-01 05:07 ./usr/share/lammps/bench/Cu_u3.eam drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/bench/POTENTIALS/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/bench/POTENTIALS/CH.airebo -> 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./usr/share/lammps/examples/ELASTIC_T/DEFORMATION/Silicon/Si.sw -> ../../../../potentials/Si.sw -rw-r--r-- root/root 3402 2026-09-01 05:07 ./usr/share/lammps/examples/ELASTIC_T/DEFORMATION/Silicon/displace.mod -rw-r--r-- root/root 6689 2026-09-01 05:07 ./usr/share/lammps/examples/ELASTIC_T/DEFORMATION/Silicon/in.elastic -rw-r--r-- root/root 1454 2026-09-01 05:07 ./usr/share/lammps/examples/ELASTIC_T/DEFORMATION/Silicon/init.mod -rw-r--r-- root/root 737 2026-09-01 05:07 ./usr/share/lammps/examples/ELASTIC_T/DEFORMATION/Silicon/potential.mod drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/GRAPHICS/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/GRAPHICS/CH.airebo -> ../../potentials/CH.airebo -rw-r--r-- root/root 2140 2026-09-01 05:07 ./usr/share/lammps/examples/GRAPHICS/README -rw-r--r-- root/root 17952 2026-09-01 05:07 ./usr/share/lammps/examples/GRAPHICS/data.breakable -rw-r--r-- root/root 555 2026-09-01 05:07 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2026-09-01 05:07 ./usr/share/lammps/examples/GRAPHICS/in.rhodo-delaunay -rw-r--r-- root/root 2768 2026-09-01 05:07 ./usr/share/lammps/examples/GRAPHICS/in.water-arrows drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/HEAT/ -rw-r--r-- root/root 1877 2026-09-01 05:07 ./usr/share/lammps/examples/HEAT/README -rw-r--r-- root/root 318418 2026-09-01 05:07 ./usr/share/lammps/examples/HEAT/data.lj -rw-r--r-- root/root 626437 2026-09-01 05:07 ./usr/share/lammps/examples/HEAT/data.spce -rw-r--r-- root/root 4105 2026-09-01 05:07 ./usr/share/lammps/examples/HEAT/in.lj.ehex -rw-r--r-- root/root 4114 2026-09-01 05:07 ./usr/share/lammps/examples/HEAT/in.lj.hex -rw-r--r-- root/root 5532 2026-09-01 05:07 ./usr/share/lammps/examples/HEAT/in.spce.ehex -rw-r--r-- root/root 5533 2026-09-01 05:07 ./usr/share/lammps/examples/HEAT/in.spce.hex -rw-r--r-- root/root 9965 2026-09-01 05:07 ./usr/share/lammps/examples/HEAT/log.10May16.lj.ehex.g++.32 -rw-r--r-- root/root 9981 2026-09-01 05:07 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2026-09-01 05:07 ./usr/share/lammps/examples/LEPTON/log.13Jan25.efield-lepton.g++.1 -rw-r--r-- root/root 5465 2026-09-01 05:07 ./usr/share/lammps/examples/LEPTON/log.13Jan25.efield-lepton.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/MC-LOOP/ -rw-r--r-- root/root 1305 2026-09-01 05:07 ./usr/share/lammps/examples/MC-LOOP/README -rw-r--r-- root/root 3198 2026-09-01 05:07 ./usr/share/lammps/examples/MC-LOOP/in.mc -rw-r--r-- root/root 4115170 2026-09-01 05:07 ./usr/share/lammps/examples/MC-LOOP/log.13Oct16.mc.g++.1 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/addtorque_group/ -rw-r--r-- root/root 1924 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/addtorque_group/in.addtorque -rw-r--r-- root/root 12869 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/addtorque_group/log.10Sep2025.addtorque.g++.1 -rw-r--r-- root/root 12869 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/addtorque_group/log.10Sep2025.addtorque.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/adios/ drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/adios/balance/ -rw-r--r-- root/root 1174 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/adios/balance/adios2_config.xml -rw-r--r-- root/root 1662 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/adios/balance/in.adios_balance -rw-r--r-- root/root 1899 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/adios/balance/in.adios_balance2 -rw-r--r-- root/root 4049 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/adios/balance/log.balance drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/adios/rerun/ -rw-r--r-- root/root 2503 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/adios/rerun/README -rw-r--r-- root/root 1913 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/adios/rerun/adios2_config.xml -rw-r--r-- root/root 630 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/adios/rerun/in.first -rw-r--r-- root/root 728 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/adios/rerun/in.read_dump -rw-r--r-- root/root 506 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/adios/rerun/in.rerun -rw-r--r-- root/root 3570 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/adios/rerun/log.20Jan20.first.g++.7.4 -rw-r--r-- root/root 3801 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/adios/rerun/log.20Jan20.read_dump.g++.7.4 -rw-r--r-- root/root 2960 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/adios/rerun/log.20Jan20.rerun.g++.7.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/agni/ -rw-r--r-- root/root 840425 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/agni/Al_jpc.agni -rw-r--r-- root/root 8134 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/agni/adatom.data -rw-r--r-- root/root 406 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/agni/in.adatom -rw-r--r-- root/root 398 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/agni/in.vacancy -rw-r--r-- root/root 3197 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/agni/log.20Jan21.adatom.g++.1 -rw-r--r-- root/root 3198 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/agni/log.20Jan21.adatom.g++.4 -rw-r--r-- root/root 3336 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/agni/log.20Jan21.vacancy.g++.1 -rw-r--r-- root/root 3337 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/agni/log.20Jan21.vacancy.g++.4 -rw-r--r-- root/root 1588 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/agni/vacancy.data drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/alchemy/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/alchemy/AlCu.eam.alloy -> ../../../potentials/AlCu.eam.alloy -rw-r--r-- root/root 535 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/alchemy/h2o.mol -rw-r--r-- root/root 1304 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/alchemy/in.alloy -rw-r--r-- root/root 3290 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/alchemy/in.twowater -rw-r--r-- root/root 531 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/alchemy/log.25Feb23.alloy.g++.4 -rw-r--r-- root/root 15819 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/alchemy/log.25Feb23.alloy.g++.4.0 -rw-r--r-- root/root 15920 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/alchemy/log.25Feb23.alloy.g++.4.1 -rw-r--r-- root/root 531 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/alchemy/log.25Feb23.twowater.g++.4 -rw-r--r-- root/root 35160 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/alchemy/log.25Feb23.twowater.g++.4.0 -rw-r--r-- root/root 36003 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/alchemy/log.25Feb23.twowater.g++.4.1 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/apip/ -rw-r--r-- root/root 6784 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/apip/Cu-1.yace -rw-r--r-- root/root 91244 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/apip/Cu_300K_Immel_2023.eam.fs -rw-r--r-- root/root 1653 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/apip/README -rw-r--r-- root/root 5351291 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/apip/data.surface.balance -rw-r--r-- root/root 1021847 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/apip/data.surface.la -rw-r--r-- root/root 268014 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/apip/data.vacancy -rw-r--r-- root/root 2525 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/apip/data.validate -rw-r--r-- root/root 3137 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/apip/in.surface.balance -rw-r--r-- root/root 3337 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/apip/in.surface.la.cons -rw-r--r-- root/root 2800 2026-09-01 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root/root 6609 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/diffraction/Output/bulkNi.hist.xrd.correct -rw-r--r-- root/root 1864 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/diffraction/Output/bulkNi.log.correct -rw-r--r-- root/root 161819 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/diffraction/Output/bulkNi_001.saed.0.vtk.correct -rw-r--r-- root/root 91543 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/diffraction/Output/bulkNi_001.saed.0_VisIt_Image.png -rw-r--r-- root/root 769 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/diffraction/Output/log.cite -rw-r--r-- root/root 2745 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/diffraction/README -rw-r--r-- root/root 809 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/diffraction/in.BulkNi -rw-r--r-- root/root 2459 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/diffraction/log.27Nov18.BulkNi.g++.1 -rw-r--r-- root/root 2456 2026-09-01 05:07 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./usr/share/lammps/examples/PACKAGES/dispersion/potential_files/ -rw-r--r-- root/root 244608 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dispersion/potential_files/c_ace.yace -rw-r--r-- root/root 796589 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dispersion/potential_files/d2.table drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/ -rw-r--r-- root/root 1009 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/README drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpd/ -rw-r--r-- root/root 800 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpd/in.dpd -rw-r--r-- root/root 6233 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpd/log.5Apr22.dpd.g++.1 -rw-r--r-- root/root 6232 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpd/log.5Apr22.dpd.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpd_coul_slater_long/ -rw-r--r-- root/root 50847 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpd_coul_slater_long/data.dpd_coul_slater_long -rw-r--r-- root/root 1618 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpd_coul_slater_long/in.dpd_coul_slater_long -rw-r--r-- root/root 6814 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpd_coul_slater_long/log.25Mar25.dpd_coul_slater.g++.1 -rw-r--r-- root/root 6812 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpd_coul_slater_long/log.25Mar25.dpd_coul_slater.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpd_tstat/ -rw-r--r-- root/root 99422 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpd_tstat/cg_spce.data -rw-r--r-- root/root 15777 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpd_tstat/cg_spce_table.pot -rw-r--r-- root/root 590 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpd_tstat/in.dpd_tstat -rw-r--r-- root/root 3908 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpd_tstat/log.5Apr22.dpd_tstat.g++.1 -rw-r--r-- root/root 3913 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpd_tstat/log.5Apr22.dpd_tstat.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpdext/ -rw-r--r-- root/root 851 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpdext/in.dpdext -rw-r--r-- root/root 8038 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpdext/log.10Mar21.dpdext.g++.1 -rw-r--r-- root/root 8037 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpdext/log.10Mar21.dpdext.g++.4 -rw-r--r-- root/root 6293 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpdext/log.5Apr22.dpdext.g++.1 -rw-r--r-- root/root 6296 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpdext/log.5Apr22.dpdext.g++.4 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpdext_tstat/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpdext_tstat/cg_spce.data -> ../dpd_tstat/cg_spce.data lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpdext_tstat/cg_spce_table.pot -> ../dpd_tstat/cg_spce_table.pot -rw-r--r-- root/root 611 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpdext_tstat/in.dpdext_tstat -rw-r--r-- root/root 3962 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpdext_tstat/log.5Apr22.dpdext_tstat.g++.1 -rw-r--r-- root/root 3967 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-basic/dpdext_tstat/log.5Apr22.dpdext_tstat.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/dpd-meso/ -rw-r--r-- root/root 2259 2026-09-01 05:07 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./usr/share/lammps/examples/PACKAGES/electrode/madelung/log.1Dec2022.madelung-ewald-ew2d.g++.1 -rw-r--r-- root/root 4572 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/madelung/log.1Dec2022.madelung-ewald-ew3dc.g++.1 -rw-r--r-- root/root 4550 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/madelung/log.1Dec2022.madelung-ewald-ffield.g++.1 -rw-r--r-- root/root 4888 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/madelung/log.1Dec2022.madelung-pppm-ew3dc.g++.1 -rw-r--r-- root/root 4865 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/madelung/log.1Dec2022.madelung-pppm-ffield.g++.1 -rw-r--r-- root/root 6220 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/madelung/plate_cap.py -rw-r--r-- root/root 686 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/madelung/settings.mod -rw-r--r-- root/root 863 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/madelung/test.sh drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/piston/ -rw-r--r-- root/root 107898 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/piston/data.piston -rw-r--r-- root/root 113871 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/piston/data.piston.final -rw-r--r-- root/root 2180 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/piston/in.piston -rw-r--r-- root/root 8690 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/piston/log.22May2024.piston.g++.1 -rw-r--r-- root/root 8710 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/piston/log.22May2024.piston.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/planar/ -rw-r--r-- root/root 17272 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/planar/data.au-vac -rw-r--r-- root/root 438 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/planar/in.planar-ewald-ew2d -rw-r--r-- root/root 445 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/planar/in.planar-ewald-ew3dc -rw-r--r-- root/root 456 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/planar/in.planar-ewald-ffield -rw-r--r-- root/root 437 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/planar/in.planar-pppm-ew3dc -rw-r--r-- root/root 455 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/planar/in.planar-pppm-ffield -rw-r--r-- root/root 6245 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/planar/log.1Dec2022.planar-ewald-ew2d.g++.1 -rw-r--r-- root/root 6261 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/planar/log.1Dec2022.planar-ewald-ew2d.g++.4 -rw-r--r-- root/root 6257 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/planar/log.1Dec2022.planar-ewald-ew3dc.g++.1 -rw-r--r-- root/root 6273 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/planar/log.1Dec2022.planar-ewald-ew3dc.g++.4 -rw-r--r-- root/root 6263 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/planar/log.1Dec2022.planar-ewald-ffield.g++.1 -rw-r--r-- root/root 6280 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/planar/log.1Dec2022.planar-ewald-ffield.g++.4 -rw-r--r-- root/root 6635 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/planar/log.1Dec2022.planar-pppm-ew3dc.g++.1 -rw-r--r-- root/root 6650 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/planar/log.1Dec2022.planar-pppm-ew3dc.g++.4 -rw-r--r-- root/root 6651 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/planar/log.1Dec2022.planar-pppm-ffield.g++.1 -rw-r--r-- root/root 6668 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/planar/log.1Dec2022.planar-pppm-ffield.g++.4 -rw-r--r-- root/root 1085 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/planar/settings.mod -rw-r--r-- root/root 335 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electrode/planar/test.sh drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/electron_stopping/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/electron_stopping/AlCu.eam.alloy -> ../../../potentials/AlCu.eam.alloy -rw-r--r-- root/root 409 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electron_stopping/Si.Si.elstop lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/electron_stopping/Si.sw -> ../../../potentials/Si.sw lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/electron_stopping/SiC.tersoff.zbl -> ../../../potentials/SiC.tersoff.zbl -rw-r--r-- root/root 1032 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electron_stopping/in.cascade_AlCu -rw-r--r-- root/root 964 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electron_stopping/in.cascade_SiSi -rw-r--r-- root/root 769 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electron_stopping/in.elstop -rw-r--r-- root/root 877 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electron_stopping/in.elstop.only -rw-r--r-- root/root 5221 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electron_stopping/log.18Sep2020.cascade_AlCu.intel.1 -rw-r--r-- root/root 5222 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electron_stopping/log.18Sep2020.cascade_AlCu.intel.4 -rw-r--r-- root/root 5177 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electron_stopping/log.18Sep2020.cascade_SiSi.intel.1 -rw-r--r-- root/root 5180 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electron_stopping/log.18Sep2020.cascade_SiSi.intel.4 -rw-r--r-- root/root 28009 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electron_stopping/log.20Mar19.elstop.g++.1 -rw-r--r-- root/root 27994 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electron_stopping/log.20Mar19.elstop.g++.4 -rw-r--r-- root/root 9319 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electron_stopping/log.20Mar19.elstop.only.g++.1 -rw-r--r-- root/root 9320 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/electron_stopping/log.20Mar19.elstop.only.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/entropy/ -rw-r--r-- root/root 756307 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/entropy/Na_MendelevM_2014.eam.fs -rw-r--r-- root/root 746884 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/entropy/data.interface -rw-r--r-- root/root 821 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/entropy/in.entropy -rw-r--r-- root/root 4475 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/entropy/log.entropy drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/extep/ -rw-r--r-- root/root 4567 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/extep/BN.data lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/extep/BN.extep -> ../../../potentials/BN.extep -rw-r--r-- root/root 647 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/extep/in.extep-bn -rw-r--r-- root/root 18767 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/extep/log.23Oct17.extep-bn.g++.1 -rw-r--r-- root/root 18764 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/extep/log.23Oct17.extep-bn.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/ drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/C7inEthanol/ drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/C7inEthanol/fep01/ -rw-r--r-- root/root 107062 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/C7inEthanol/fep01/data.init_conf_with_heptane -rw-r--r-- root/root 2056 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/C7inEthanol/fep01/in.insertion -rw-r--r-- root/root 130983 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/C7inEthanol/fep01/log.insertion drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/C7inEthanol/fep10/ -rw-r--r-- root/root 107062 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/C7inEthanol/fep10/data.init_conf_with_heptane -rw-r--r-- root/root 2055 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/C7inEthanol/fep10/in.deletion -rw-r--r-- root/root 130982 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/C7inEthanol/fep10/log.deletion drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/ -rw-r--r-- root/root 3411 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/README.md drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/fep01/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/fep01/data.0.lmp -> ../mols/data.0.lmp -rw-r--r-- root/root 734 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/fep01/fep01.fep -rw-r--r-- root/root 5414 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/fep01/in.fep01.lmp -rw-r--r-- root/root 261863 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/fep01/log.fep01 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/fep10/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/fep10/data.1.lmp -> ../mols/data.1.lmp -rw-r--r-- root/root 720 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/fep10/fep10.fep -rw-r--r-- root/root 5413 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/fep10/in.fep10.lmp -rw-r--r-- root/root 261863 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/fep10/log.fep10 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/mols/ -rw-r--r-- root/root 1922 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/mols/CC-CO.ff -rw-r--r-- root/root 338 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/mols/CC-CO.zmat -rw-r--r-- root/root 338 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/mols/CO-CC.zmat -rw-r--r-- root/root 475 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/mols/README -rw-r--r-- root/root 140862 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/mols/data.0.lmp -rw-r--r-- root/root 140862 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/mols/data.1.lmp -rw-r--r-- root/root 329 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/mols/spce.ff -rw-r--r-- root/root 56 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CC-CO/mols/spce.zmat drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/ -rw-r--r-- root/root 3446 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/README.md drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/bar01/ -rw-r--r-- root/root 131382 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/bar01/bar01.fep lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/bar01/data.0.lmp -> ../mols/data.0.lmp -rw-r--r-- root/root 2424 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/bar01/in.bar01.lmp -rw-r--r-- root/root 117612 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/bar01/log.bar01 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/bar10/ -rw-r--r-- root/root 122443 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/bar10/bar10.fep lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/bar10/data.1.lmp -> ../mols/data.1.lmp -rw-r--r-- root/root 2424 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/bar10/in.bar10.lmp -rw-r--r-- root/root 117612 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/bar10/log.ber10 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/fep01/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/fep01/data.0.lmp -> ../mols/data.0.lmp -rw-r--r-- root/root 725 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/fep01/fep01.fep -rw-r--r-- root/root 2924 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/fep01/in.fep01.lmp -rw-r--r-- root/root 394346 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/fep01/log.fep01 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/fep10/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/fep10/data.1.lmp -> ../mols/data.1.lmp -rw-r--r-- root/root 750 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/fep10/fep10.fep -rw-r--r-- root/root 2924 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CH4-CF4/fep10/in.fep10.lmp 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./usr/share/lammps/examples/PACKAGES/fep/CH4hyd/ -rw-r--r-- root/root 2292 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CH4hyd/README.md drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/fep/CH4hyd/fdti01/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/fep/CH4hyd/fdti01/data.lmp -> ../mols/data.lmp -rw-r--r-- root/root 789 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CH4hyd/fdti01/fdti01.fep -rw-r--r-- root/root 2703 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CH4hyd/fdti01/in.fdti01.lmp -rw-r--r-- root/root 85899 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/fep/CH4hyd/fdti01/log.fdti01 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/fep/CH4hyd/fdti10/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/fep/CH4hyd/fdti10/data.lmp -> ../mols/data.lmp -rw-r--r-- root/root 792 2026-09-01 05:07 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-rw-r--r-- root/root 88889 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/hdnnp/hdnnp-data/weights.008.data -rw-r--r-- root/root 1790 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/hdnnp/in.hdnnp -rw-r--r-- root/root 2004 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/hdnnp/in.hybrid -rw-r--r-- root/root 36250 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/hdnnp/log.23Aug23.hdnnp.g++.1 -rw-r--r-- root/root 36250 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/hdnnp/log.23Aug23.hdnnp.g++.4 -rw-r--r-- root/root 37018 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/hdnnp/log.23Aug23.hybrid.g++.1 -rw-r--r-- root/root 37023 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/hdnnp/log.23Aug23.hybrid.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/hma/ -rw-r--r-- root/root 732 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/hma/README -rw-r--r-- root/root 848 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/hma/hma.in -rw-r--r-- root/root 1490199 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/hma/log.6Nov18.hma.g++.1 -rw-r--r-- root/root 1490197 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/hma/log.6Nov18.hma.g++.4 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/ilves/ -rw-r--r-- root/root 3199 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/README -rw-r--r-- root/root 34449 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/covid.coeffs -rw-r--r-- root/root 141187 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/data.cg-polymers -rw-r--r-- root/root 4297534 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/ilves/data.covid.gz lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/ilves/data.peptide -> ../../peptide/data.peptide -rw-r--r-- root/root 8071956 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/data.polymelt lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/ilves/data.rhodo -> ../../../bench/data.rhodo -rw-r--r-- root/root 1698 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/in.cg-polymers -rw-r--r-- root/root 1829 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/in.covid -rw-r--r-- root/root 799 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/in.dimer -rw-r--r-- root/root 719 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/in.peptide-allbonds -rw-r--r-- root/root 701 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/in.peptide-fixed -rw-r--r-- root/root 692 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/in.peptide-ilves -rw-r--r-- root/root 788 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/in.peptide-mix -rw-r--r-- root/root 651 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/in.peptide-rattle -rw-r--r-- root/root 649 2026-09-01 05:07 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./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.dimer.g++.1 -rw-r--r-- root/root 5682 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.dimer.g++.4 -rw-r--r-- root/root 11388 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.peptide-allbonds.g++.1 -rw-r--r-- root/root 11386 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.peptide-allbonds.g++.4 -rw-r--r-- root/root 9410 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.peptide-fixed.g++.1 -rw-r--r-- root/root 9409 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.peptide-fixed.g++.4 -rw-r--r-- root/root 9425 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.peptide-ilves.g++.1 -rw-r--r-- root/root 9424 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.peptide-ilves.g++.4 -rw-r--r-- root/root 9892 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.peptide-mix.g++.1 -rw-r--r-- root/root 9889 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.peptide-mix.g++.4 -rw-r--r-- root/root 8629 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.peptide-rattle.g++.1 -rw-r--r-- root/root 8631 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.peptide-rattle.g++.4 -rw-r--r-- root/root 8625 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.peptide-shake.g++.1 -rw-r--r-- root/root 8624 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.peptide-shake.g++.4 -rw-r--r-- root/root 6620 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.polymelt.g++.1 -rw-r--r-- root/root 6619 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.polymelt.g++.4 -rw-r--r-- root/root 32921 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.rhodo-allbonds.g++.1 -rw-r--r-- root/root 32921 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.rhodo-allbonds.g++.4 -rw-r--r-- root/root 15132 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.rhodo-ilves.g++.1 -rw-r--r-- root/root 15136 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.rhodo-ilves.g++.4 -rw-r--r-- root/root 14345 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.rhodo-shake.g++.1 -rw-r--r-- root/root 14349 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/log.1Jul2026.rhodo-shake.g++.4 -rw-r--r-- root/root 147 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ilves/mol.dimer drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/ -rw-r--r-- root/root 2377 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/README -rw-r--r-- root/root 364587 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/bucky-plus-cnt-mol.psf -rw-r--r-- root/root 1435 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/bucky_cnt_imd.vmd -rw-r--r-- root/root 248541 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/data.bucky-plus-cnt -rw-r--r-- root/root 1126965 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/data.deca-ala-solv -rw-r--r-- root/root 709164 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/deca-ala-solv.psf -rw-r--r-- root/root 721 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/deca-ala-solv_imd-demo.vmd -rw-r--r-- root/root 317 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/deca-ala-solv_imd_v3.py -rw-r--r-- root/root 23518 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/deca-ala.psf -rw-r--r-- root/root 353 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/deca-ala_imd-demo.vmd -rw-r--r-- root/root 215 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/falcon.tcl -rw-r--r-- root/root 1447 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/in.bucky-plus-cnt -rw-r--r-- root/root 1508 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/in.bucky-plus-cnt-gpu -rw-r--r-- root/root 687 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/in.deca-ala-solv-filter_imd -rw-r--r-- root/root 673 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/in.deca-ala-solv_imd -rw-r--r-- root/root 787 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/in.deca-ala-solv_imd_v3 -rw-r--r-- root/root 677 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/in.deca-ala_imd -rw-r--r-- root/root 759 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/in.deca-ala_imd-gpu -rw-r--r-- root/root 462 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/in.melt_imd -rw-r--r-- root/root 666 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/in.melt_imd-gpu -rw-r--r-- root/root 316818 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/melt.psf -rw-r--r-- root/root 437 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/imd/melt_imd-demo.vmd drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/aip_water_2dm/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/aip_water_2dm/CBNOH.aip.water.2dm -> ../../../../potentials/CBNOH.aip.water.2dm lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/aip_water_2dm/COH.DMC.aip.water.2dm -> ../../../../potentials/COH.DMC.aip.water.2dm -rw-r--r-- root/root 64909 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/aip_water_2dm/gra_water.data -rw-r--r-- root/root 2062 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/aip_water_2dm/in.gr_water -rw-r--r-- root/root 2070 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/aip_water_2dm/in.gr_water.opt -rw-r--r-- root/root 9923 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/aip_water_2dm/log.18May23.gr_water.g++.1 -rw-r--r-- root/root 9927 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/aip_water_2dm/log.18May23.gr_water.g++.4 -rw-r--r-- root/root 10611 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/aip_water_2dm/log.18May23.gr_water.opt.g++.1 -rw-r--r-- root/root 10610 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/aip_water_2dm/log.18May23.gr_water.opt.g++.4 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/drip/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/drip/C.drip -> ../../../../potentials/C.drip lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/drip/CH.rebo -> ../../../../potentials/CH.rebo -rw-r--r-- root/root 171 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/drip/README.txt -rw-r--r-- root/root 31457 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/drip/data.C -rw-r--r-- root/root 42773 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/drip/data.CH -rw-r--r-- root/root 769 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/drip/in.CH_drip -rw-r--r-- root/root 683 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/drip/in.C_drip -rw-r--r-- root/root 4256 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/drip/log.30Apr19.CH_drip.g++.1 -rw-r--r-- root/root 4259 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/drip/log.30Apr19.CH_drip.g++.4 -rw-r--r-- root/root 4168 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/drip/log.30Apr19.C_drip.g++.1 -rw-r--r-- root/root 4257 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/drip/log.30Apr19.C_drip.g++.4 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/BNC.tersoff -> ../../../../potentials/BNC.tersoff lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/BNCH-old.ILP -> ../../../../potentials/BNCH-old.ILP lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/BNCH.ILP -> ../../../../potentials/BNCH.ILP -rw-r--r-- root/root 152539 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/Bi_gr_AB_stack_2L_noH.data lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/CH.rebo -> ../../../../potentials/CH.rebo -rw-r--r-- root/root 161499 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/gr_hBN_Cstack_2L_noH.data -rw-r--r-- root/root 138934 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/hBN_AA_prime_stack_2L_noH.data -rw-r--r-- root/root 246016 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/hBN_AB_stack_2L_noH_equi_300K.data -rw-r--r-- root/root 1648 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/in.bilayer-graphene -rw-r--r-- root/root 2135 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/in.bilayer-hBN -rw-r--r-- root/root 2092 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/in.grhBN -rw-r--r-- root/root 2162 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/in.ilp_graphene_hbn -rw-r--r-- root/root 5290 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/log.31Jul19.bilayer-graphene.g++.1 -rw-r--r-- root/root 5279 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/log.31Jul19.bilayer-graphene.g++.4 -rw-r--r-- root/root 6408 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/log.31Jul19.bilayer-hBN.g++.1 -rw-r--r-- root/root 6391 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/log.31Jul19.bilayer-hBN.g++.4 -rw-r--r-- root/root 6861 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/log.31Jul19.grhBN.g++.1 -rw-r--r-- root/root 6852 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/log.31Jul19.grhBN.g++.4 -rw-r--r-- root/root 6472 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/log.31Jul19.ilp_graphene_hbn.g++.1 -rw-r--r-- root/root 6464 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/log.31Jul19.ilp_graphene_hbn.g++.4 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_tmds/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_tmds/TMD.ILP -> ../../../../potentials/TMD.ILP -rw-r--r-- root/root 137077 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_tmds/bilayer_MoS2_AAprime_stacking.data -rw-r--r-- root/root 1054 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_tmds/in.mos2 -rw-r--r-- root/root 6458 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_tmds/log.7Jan22.mos2.g++.1 -rw-r--r-- root/root 6457 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_tmds/log.7Jan22.mos2.g++.4 -rw-r--r-- root/root 11117 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/ilp_tmds/tmd.sw.mod drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_full/ -rw-r--r-- root/root 152539 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_full/Bi_gr_AB_stack_2L_noH.data -rw-r--r-- root/root 245256 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_full/Bi_gr_AB_stack_2L_noH_300K.data lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_full/CH.rebo -> ../../../../potentials/CH.rebo lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_full/CH_taper.KC -> ../../../../potentials/CH_taper.KC -rw-r--r-- root/root 1741 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_full/in.bilayer-graphene -rw-r--r-- root/root 6718 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_full/log.5Jun19.bilayer-graphene.g++.1 -rw-r--r-- root/root 6715 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_full/log.5Jun19.bilayer-graphene.g++.4 -rw-r--r-- root/root 6473 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_full/log.5Jun19.bilayer-graphene.icc.1 -rw-r--r-- root/root 6454 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_full/log.5Jun19.bilayer-graphene.icc.4 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_z/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_z/CC.KC -> ../../../../potentials/CC.KC lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_z/CH.rebo -> ../../../../potentials/CH.rebo -rw-r--r-- root/root 11695 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_z/data.bilayer-graphene -rw-r--r-- root/root 5980 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_z/data.graphene-adsorbant -rw-r--r-- root/root 1533 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_z/in.atom-diffusion -rw-r--r-- root/root 1555 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_z/in.bilayer-graphene -rw-r--r-- root/root 13615 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_z/log.16Mar18.atom-diffusion.g++.1 -rw-r--r-- root/root 13619 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_z/log.16Mar18.atom-diffusion.g++.4 -rw-r--r-- root/root 14035 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_z/log.30Apr19.bilayer-graphene.g++.1 -rw-r--r-- root/root 14027 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_z/log.30Apr19.bilayer-graphene.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/lebedeva/ -rw-r--r-- root/root 177 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/lebedeva/2particles.dat -rw-r--r-- root/root 1414 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/lebedeva/2particles.in -rw-r--r-- root/root 872 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/lebedeva/CC.Lebedeva -rw-r--r-- root/root 35801 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/lebedeva/LammpsResult.dat -rw-r--r-- root/root 2327 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/lebedeva/LebDer.pl -rw-r--r-- root/root 641 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/lebedeva/lebedeva00.plot drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/saip_metal/ -rw-r--r-- root/root 6334 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/saip_metal/3Lgold_1Lgr_atop_sliding.data lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/saip_metal/Au_u3.eam -> ../../../../potentials/Au_u3.eam lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/saip_metal/CH.rebo -> ../../../../potentials/CH.rebo lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/saip_metal/CHAu.ILP -> ../../../../potentials/CHAu.ILP -rw-r--r-- root/root 1209 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/saip_metal/in.gold_gr -rw-r--r-- root/root 6161 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/saip_metal/log.7Jan22.gold_gr.g++.1 -rw-r--r-- root/root 6159 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/saip_metal/log.7Jan22.gold_gr.g++.4 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/saip_metal_tmd/ -rw-r--r-- root/root 176744 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/saip_metal_tmd/3Lgold_1Lmos2.data lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/saip_metal_tmd/Au_u3.eam -> ../../../../potentials/Au_u3.eam lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/saip_metal_tmd/TMDAu.SAIP -> ../../../../potentials/TMDAu.SAIP -rw-r--r-- root/root 1387 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/saip_metal_tmd/in.au_mos2 -rw-r--r-- root/root 7575 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/saip_metal_tmd/log.10Sep25.au_mos2.g++.1 -rw-r--r-- root/root 7573 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/interlayer/saip_metal_tmd/log.10Sep25.au_mos2.g++.4 lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/interlayer/saip_metal_tmd/tmd.sw.mod -> ../../../../potentials/tmd.sw.mod drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ipi/ -rw-r--r-- root/root 4203 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ipi/C.opt.tersoff -rw-r--r-- root/root 1525 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ipi/README.md -rw-r--r-- root/root 149849 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ipi/data.graphene -rw-r--r-- root/root 1461 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ipi/i-pi_input.xml -rw-r--r-- root/root 46232 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ipi/i-pi_positions.xyz -rw-r--r-- root/root 959 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ipi/in.graphene drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/latboltz/ drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/latboltz/confined_colloid/ -rw-r--r-- root/root 5731 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/latboltz/confined_colloid/in.confined_colloids -rw-r--r-- root/root 8826 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/latboltz/confined_colloid/log.09Mar22.confined_colloids.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 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2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/manybody_table/table_CG_CG.txt -rw-r--r-- root/root 48957 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/manybody_table/table_CG_CG_CG.txt drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/mbx/ drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/mbx/256h2o/ -rw-r--r-- root/root 2042 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/mbx/256h2o/in.mbx_h2o -rw-r--r-- root/root 124707 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/mbx/256h2o/initial.data -rw-r--r-- root/root 29646 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/mbx/256h2o/log.23Mar26.256h2o.g++.1 -rw-r--r-- root/root 555 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/mbx/256h2o/mbx.json drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/mbx/256h2o_dipole/ -rw-r--r-- root/root 3210 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/mbx/256h2o_dipole/in.mbx_h2o 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./usr/share/lammps/examples/PACKAGES/mbx/na+_slab/ -rw-r--r-- root/root 1987 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/mbx/na+_slab/in.slab -rw-r--r-- root/root 253711 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/mbx/na+_slab/initial.data -rw-r--r-- root/root 29546 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/mbx/na+_slab/log.23Mar26.na+_slab.g++.1 -rw-r--r-- root/root 568 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/mbx/na+_slab/mbx.json drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/mbx/plugin/ -rw-r--r-- root/root 2700 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/mbx/plugin/CMakeLists.txt lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/mbx/plugin/LAMMPSInterfacePlugin.cmake -> ../../../../cmake/Modules/LAMMPSInterfacePlugin.cmake lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/mbx/plugin/MBX.cmake -> ../../../../cmake/Modules/Packages/MBX.cmake 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./usr/share/lammps/examples/PACKAGES/meam_spline/in.meam-spline.Si -rw-r--r-- root/root 2414 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_spline/in.meam-spline.TiO2 -rw-r--r-- root/root 3813 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_spline/log.17Dec2022.meam-spline.Si.g++.1 -rw-r--r-- root/root 3815 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_spline/log.17Dec2022.meam-spline.Si.g++.4 -rw-r--r-- root/root 14226 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_spline/log.17Dec2022.meam-spline.TiO2.g++.1 -rw-r--r-- root/root 14231 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_spline/log.17Dec2022.meam-spline.TiO2.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/Si.b.meam.sw.spline -> ../../../../potentials/Si.b.meam.sw.spline -rw-r--r-- root/root 996 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/in.bcc -rw-r--r-- root/root 1104 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/in.bcc_relax -rw-r--r-- root/root 1004 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/in.dc -rw-r--r-- root/root 1108 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/in.dc_relax -rw-r--r-- root/root 873 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/in.energy_conservation.meam.sw -rw-r--r-- root/root 1002 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/in.fcc -rw-r--r-- root/root 1118 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/in.fcc_relax -rw-r--r-- root/root 1511 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/in.hcp_relax -rw-r--r-- root/root 998 2026-09-01 05:07 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./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/log.17Dec2022.dc.g++.4 -rw-r--r-- root/root 1025753 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/log.17Dec2022.dc_relax.g++.1 -rw-r--r-- root/root 1025757 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/log.17Dec2022.dc_relax.g++.4 -rw-r--r-- root/root 23849 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/log.17Dec2022.energy_conservation.meam.sw.g++.1 -rw-r--r-- root/root 23849 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/log.17Dec2022.energy_conservation.meam.sw.g++.4 -rw-r--r-- root/root 3856 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/log.17Dec2022.fcc.g++.1 -rw-r--r-- root/root 3857 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/log.17Dec2022.fcc.g++.4 -rw-r--r-- root/root 48656 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/log.17Dec2022.fcc_relax.g++.1 -rw-r--r-- root/root 1025810 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/log.17Dec2022.fcc_relax.g++.4 -rw-r--r-- root/root 1026279 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/log.17Dec2022.hcp_relax.g++.1 -rw-r--r-- root/root 145315 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/log.17Dec2022.hcp_relax.g++.4 -rw-r--r-- root/root 3848 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/log.17Dec2022.sc.g++.1 -rw-r--r-- root/root 3941 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/log.17Dec2022.sc.g++.4 -rw-r--r-- root/root 440191 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/log.17Dec2022.sc_relax.g++.1 -rw-r--r-- root/root 440380 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/log.17Dec2022.sc_relax.g++.4 -rw-r--r-- root/root 3429 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/log.17Dec2022.single_atom.g++.1 -rw-r--r-- root/root 3429 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/log.17Dec2022.single_atom.g++.4 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Ti/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Ti/Ti.meam.sw.spline -> ../../../../potentials/Ti.meam.sw.spline -rw-r--r-- root/root 857 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Ti/in.alpha -rw-r--r-- root/root 1434 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Ti/in.alpha_relaxation -rw-r--r-- root/root 742 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Ti/in.beta -rw-r--r-- root/root 2055 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/meam_sw_spline/Ti/in.energy_conservation.meam.sw -rw-r--r-- root/root 736 2026-09-01 05:07 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root/root 4889 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/mgpt/log.7Feb24.bcc0.g++.1 -rw-r--r-- root/root 4891 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/mgpt/log.7Feb24.bcc0.g++.4 -rw-r--r-- root/root 5346 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/mgpt/log.7Feb24.vac0-bcc.g++.1 -rw-r--r-- root/root 5345 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/mgpt/log.7Feb24.vac0-bcc.g++.4 -rw-r--r-- root/root 6858 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/mgpt/log.7Feb24.vacmin-bcc.g++.1 -rw-r--r-- root/root 6862 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/mgpt/log.7Feb24.vacmin-bcc.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ml-runner/ drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ml-runner/2G-H2O-HDNNP/ -rw-r--r-- root/root 14332 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/ml-runner/2G-H2O-HDNNP/input.nn -rw-r--r-- root/root 11351 2026-09-01 05:07 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root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/neighbor-swap/library_2nn.meam -> ../../../potentials/library_2nn.meam -rw-r--r-- root/root 8493 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/neighbor-swap/log.11Jul25.KMC_pulse_center.g++.1 -rw-r--r-- root/root 8498 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/neighbor-swap/log.11Jul25.KMC_pulse_center.g++.4 -rw-r--r-- root/root 8495 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/neighbor-swap/log.11Jul25.KMC_pulse_edge.g++.1 -rw-r--r-- root/root 8501 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/neighbor-swap/log.11Jul25.KMC_pulse_edge.g++.4 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/orient_eco/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/orient_eco/Ni_u3.eam -> ../../../potentials/Ni_u3.eam -rw-r--r-- root/root 2127895 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/orient_eco/data.sigma5 -rw-r--r-- root/root 507 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./usr/share/lammps/examples/PACKAGES/rann/log.22Jun21.rann.g++.1 -rw-r--r-- root/root 8651 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/rann/log.22Jun21.rann.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/ drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/create_atoms_polystyrene/ -rw-r--r-- root/root 344 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/create_atoms_polystyrene/grow_styrene.map -rw-r--r-- root/root 15741 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/create_atoms_polystyrene/grow_styrene_post.molecule_template -rw-r--r-- root/root 9966 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/create_atoms_polystyrene/grow_styrene_pre.molecule_template -rw-r--r-- root/root 1048 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/create_atoms_polystyrene/in.grow_styrene -rw-r--r-- root/root 12489 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/create_atoms_polystyrene/log.10Dec2025.grow_styrene.g++.1 -rw-r--r-- root/root 12488 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/create_atoms_polystyrene/log.10Dec2025.grow_styrene.g++.4 -rw-r--r-- root/root 22564 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/create_atoms_polystyrene/trimer.data drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/reaction/nylon,6-6_melt/ -rw-r--r-- root/root 1446 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/nylon,6-6_melt/in.large_nylon_melt -rw-r--r-- root/root 3777701 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/reaction/nylon,6-6_melt/large_nylon_melt.data.gz -rw-r--r-- root/root 8679 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/nylon,6-6_melt/log.10Dec2025.large_nylon_melt.g++.1 -rw-r--r-- root/root 8679 2026-09-01 05:07 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./usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon/in.tiny_nylon.stabilized -rw-r--r-- root/root 1630 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon/in.tiny_nylon.stabilized_variable_probability -rw-r--r-- root/root 1229 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon/in.tiny_nylon.unstabilized -rw-r--r-- root/root 25632 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon/log.10Dec2025.tiny_nylon.stabilized.g++.1 -rw-r--r-- root/root 25640 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon/log.10Dec2025.tiny_nylon.stabilized.g++.4 -rw-r--r-- root/root 10813 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon/log.10Dec2025.tiny_nylon.stabilized_variable_probability.g++.1 -rw-r--r-- root/root 10822 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon/log.10Dec2025.tiny_nylon.stabilized_variable_probability.g++.4 -rw-r--r-- root/root 9713 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root/root 5722 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon_json/rxn1_stp1_unreacted.json -rw-r--r-- root/root 183 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon_json/rxn1_stp2_map -rw-r--r-- root/root 4768 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon_json/rxn1_stp2_reacted.json -rw-r--r-- root/root 5440 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon_json/rxn1_stp2_unreacted.json -rw-r--r-- root/root 21466 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon_json/tiny_nylon.data drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon_wildcards/ -rw-r--r-- root/root 1434 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/reaction/tiny_nylon_wildcards/in.tiny_nylon.stabilized -rw-r--r-- root/root 25275 2026-09-01 05:07 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./usr/share/lammps/examples/PACKAGES/reaction/tiny_polystyrene/tiny_polystyrene.data drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/rhok/ -rw-r--r-- root/root 2935 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/rhok/README.md -rw-r--r-- root/root 854 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/rhok/in.crystal -rw-r--r-- root/root 806 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/rhok/in.pinning -rw-r--r-- root/root 919 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/rhok/in.setup -rw-r--r-- root/root 8996 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/rhok/log.22Sep2017.crystal.g++.1 -rw-r--r-- root/root 8996 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/rhok/log.22Sep2017.crystal.g++.4 -rw-r--r-- root/root 14223 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/rhok/log.22Sep2017.pinning.g++.1 -rw-r--r-- root/root 14224 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/rhok/log.22Sep2017.pinning.g++.4 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./usr/share/lammps/examples/PACKAGES/scafacos/in.scafacos.cw.p2nfft -rw-r--r-- root/root 614 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/scafacos/in.scafacos.cw.p3m -rw-r--r-- root/root 637 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/scafacos/in.scafacos.ewald -rw-r--r-- root/root 637 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/scafacos/in.scafacos.fmm -rw-r--r-- root/root 619 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/scafacos/in.scafacos.hsph.direct -rw-r--r-- root/root 698 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/scafacos/in.scafacos.hsph.fmm -rw-r--r-- root/root 663 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/scafacos/in.scafacos.hsph.p2nfft -rw-r--r-- root/root 639 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/scafacos/in.scafacos.p2nfft -rw-r--r-- root/root 636 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/scafacos/in.scafacos.p3m -rw-r--r-- root/root 3751 2026-09-01 05:07 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./usr/share/lammps/examples/PACKAGES/shock/ -rw-r--r-- root/root 177 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/shock/README drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/shock/hugoniostat/ -rw-r--r-- root/root 4617 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/shock/hugoniostat/in.hugoniostat -rw-r--r-- root/root 18650 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/shock/hugoniostat/log.08Feb21.hugoniostat.g++.1 -rw-r--r-- root/root 18648 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/shock/hugoniostat/log.08Feb21.hugoniostat.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/shock/msst/ -rw-r--r-- root/root 1159 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/shock/msst/in.msst -rw-r--r-- root/root 7924 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/shock/msst/log.08Feb21.msst.g++.1 -rw-r--r-- root/root 7924 2026-09-01 05:07 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./usr/share/lammps/examples/PACKAGES/smtbq/ -rw-r--r-- root/root 1439 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/smtbq/AgCuPancake.data -rw-r--r-- root/root 117154 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/smtbq/data.Alpha -rw-r--r-- root/root 1731 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/smtbq/ffield.smtbq.Al -rw-r--r-- root/root 2899 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/smtbq/ffield.smtbq.Al2O3 -rw-r--r-- root/root 2857 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/smtbq/ffield.smtbq.TiO2 -rw-r--r-- root/root 931 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/smtbq/in.smatbAgCuPancake -rw-r--r-- root/root 520 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/smtbq/in.smatbBulkFCC -rw-r--r-- root/root 1785 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/smtbq/in.smtbq.Al -rw-r--r-- root/root 1174 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/smtbq/in.smtbq.Al2O3 -rw-r--r-- root/root 2459 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/smtbq/in.smtbq.TiO2 -rw-r--r-- root/root 79840 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/smtbq/log.27Oct21.smatbAgCuPancake.g++ -rw-r--r-- root/root 7954 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/smtbq/log.27Oct21.smatbBulkFCC.g++ -rw-r--r-- root/root 17512 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/smtbq/log.smtbq.Al.g++.1 -rw-r--r-- root/root 17246 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/smtbq/log.smtbq.Al.g++.4 -rw-r--r-- root/root 9909 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/smtbq/log.smtbq.Al2O3.g++.1 -rw-r--r-- root/root 9910 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/smtbq/log.smtbq.Al2O3.g++.4 -rw-r--r-- root/root 13382 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/smtbq/log.smtbq.TiO2.g++.1 -rw-r--r-- root/root 13387 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/smtbq/log.smtbq.TiO2.g++.4 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/sna_nnn_slcsa/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/PACKAGES/sna_nnn_slcsa/Zr_mm.eam.fs -> ../../../potentials/Zr_mm.eam.fs -rw-r--r-- root/root 69462 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/sna_nnn_slcsa/data.zr_cell drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/sna_nnn_slcsa/dir.slcsa/ -rw-r--r-- root/root 1880 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/sna_nnn_slcsa/dir.slcsa/lda_scalings.dat -rw-r--r-- root/root 46 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/sna_nnn_slcsa/dir.slcsa/lr_bias.dat -rw-r--r-- root/root 142 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/sna_nnn_slcsa/dir.slcsa/lr_decision.dat -rw-r--r-- root/root 384 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/sna_nnn_slcsa/dir.slcsa/mahalanobis_file.dat -rw-r--r-- root/root 649 2026-09-01 05:07 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05:07 ./usr/share/lammps/examples/PACKAGES/stressprofile/log.6Mar2022.flat.g++.1 -rw-r--r-- root/root 7257 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/stressprofile/log.6Mar2022.flat.g++.4 -rw-r--r-- root/root 7199 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/stressprofile/log.6Mar2022.sphere.g++.1 -rw-r--r-- root/root 7204 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/stressprofile/log.6Mar2022.sphere.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/tally/ -rw-r--r-- root/root 316 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/tally/README -rw-r--r-- root/root 424090 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/tally/data.spce -rw-r--r-- root/root 1807 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/tally/in.force -rw-r--r-- root/root 1933 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/tally/in.pe -rw-r--r-- root/root 1480 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/tally/in.stress 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./usr/share/lammps/examples/PACKAGES/temper_npt/log.temper_npt-17Aug17.g++.8 -rw-r--r-- root/root 10178 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/temper_npt/log.temper_npt-17Aug17.g++.8.0 -rw-r--r-- root/root 10179 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/temper_npt/log.temper_npt-17Aug17.g++.8.1 -rw-r--r-- root/root 10178 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/temper_npt/log.temper_npt-17Aug17.g++.8.2 -rw-r--r-- root/root 10179 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/temper_npt/log.temper_npt-17Aug17.g++.8.3 -rw-r--r-- root/root 10177 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/temper_npt/log.temper_npt-17Aug17.g++.8.4 -rw-r--r-- root/root 10178 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/temper_npt/log.temper_npt-17Aug17.g++.8.5 -rw-r--r-- root/root 10180 2026-09-01 05:07 ./usr/share/lammps/examples/PACKAGES/temper_npt/log.temper_npt-17Aug17.g++.8.6 -rw-r--r-- root/root 10181 2026-09-01 05:07 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./usr/share/lammps/examples/SPIN/cobalt_fcc/log.14Apr20.spin.cobalt_fcc.g++.4 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/SPIN/cobalt_hcp/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/SPIN/cobalt_hcp/Co_PurjaPun_2012.eam.alloy -> ../cobalt_fcc/Co_PurjaPun_2012.eam.alloy drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/SPIN/cobalt_hcp/exchange_fit_hcp_co/ -rw-r--r-- root/root 882 2026-09-01 05:07 ./usr/share/lammps/examples/SPIN/cobalt_hcp/exchange_fit_hcp_co/exchange_fit.py -rw-r--r-- root/root 334 2026-09-01 05:07 ./usr/share/lammps/examples/SPIN/cobalt_hcp/exchange_fit_hcp_co/exchange_hcp_co.dat -rw-r--r-- root/root 1596 2026-09-01 05:07 ./usr/share/lammps/examples/SPIN/cobalt_hcp/in.spin.cobalt_hcp -rw-r--r-- root/root 6115 2026-09-01 05:07 ./usr/share/lammps/examples/SPIN/cobalt_hcp/log.14Apr20.spin.cobalt_hcp.g++.1 -rw-r--r-- root/root 6114 2026-09-01 05:07 ./usr/share/lammps/examples/SPIN/cobalt_hcp/log.14Apr20.spin.cobalt_hcp.g++.4 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/SPIN/dipole_spin/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/SPIN/dipole_spin/Fe_Mishin2006.eam.alloy -> ../iron/Fe_Mishin2006.eam.alloy drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/SPIN/dipole_spin/exchange_fit_bcc_iron/ -rw-r--r-- root/root 83 2026-09-01 05:07 ./usr/share/lammps/examples/SPIN/dipole_spin/exchange_fit_bcc_iron/exchange_bcc_iron.dat -rw-r--r-- root/root 884 2026-09-01 05:07 ./usr/share/lammps/examples/SPIN/dipole_spin/exchange_fit_bcc_iron/exchange_fit.py -rw-r--r-- root/root 1103 2026-09-01 05:07 ./usr/share/lammps/examples/SPIN/dipole_spin/fe_dd.dat -rw-r--r-- root/root 1587 2026-09-01 05:07 ./usr/share/lammps/examples/SPIN/dipole_spin/in.spin.iron_dipole_cut -rw-r--r-- root/root 1624 2026-09-01 05:07 ./usr/share/lammps/examples/SPIN/dipole_spin/in.spin.iron_dipole_ewald 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root/root 1934 2026-09-01 05:07 ./usr/share/lammps/examples/bpm/impact/in.bpm.impact.spring -rw-r--r-- root/root 12409 2026-09-01 05:07 ./usr/share/lammps/examples/bpm/impact/log.17Feb2022.bpm.impact.spring.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/bpm/metamaterial/ -rw-r--r-- root/root 1319 2026-09-01 05:07 ./usr/share/lammps/examples/bpm/metamaterial/in.bpm.metamaterial -rw-r--r-- root/root 14316 2026-09-01 05:07 ./usr/share/lammps/examples/bpm/metamaterial/log.16Apr2026.bpm.metamaterial.g++.1 -rw-r--r-- root/root 14316 2026-09-01 05:07 ./usr/share/lammps/examples/bpm/metamaterial/log.16Apr2026.bpm.metamaterial.g++.4 -rw-r--r-- root/root 115090 2026-09-01 05:07 ./usr/share/lammps/examples/bpm/metamaterial/metamaterial.data drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/bpm/plasticity/ -rw-r--r-- root/root 2945 2026-09-01 05:07 ./usr/share/lammps/examples/bpm/plasticity/in.bpm.plasticity -rw-r--r-- root/root 155223 2026-09-01 05:07 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root/root 11937 2026-09-01 05:07 ./usr/share/lammps/examples/dreiding/log.14Jul25.dreiding.g++.4 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/eim/ -rw-r--r-- root/root 119292 2026-09-01 05:07 ./usr/share/lammps/examples/eim/data.eim lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/eim/ffield.eim -> ../../potentials/ffield.eim -rw-r--r-- root/root 787 2026-09-01 05:07 ./usr/share/lammps/examples/eim/in.eim -rw-r--r-- root/root 3511 2026-09-01 05:07 ./usr/share/lammps/examples/eim/log.27Nov18.eim.g++.1 -rw-r--r-- root/root 3515 2026-09-01 05:07 ./usr/share/lammps/examples/eim/log.27Nov18.eim.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/ellipse/ -rw-r--r-- root/root 1830 2026-09-01 05:07 ./usr/share/lammps/examples/ellipse/in.ellipse.gayberne -rw-r--r-- root/root 1926 2026-09-01 05:07 ./usr/share/lammps/examples/ellipse/in.ellipse.resquared -rw-r--r-- root/root 8051 2026-09-01 05:07 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./usr/share/lammps/examples/mdi/log.17Jun22.snapshot.alone.1 -rw-r--r-- root/root 4460 2026-09-01 05:07 ./usr/share/lammps/examples/mdi/log.17Jun22.snapshot.driver.mpi.1 -rw-r--r-- root/root 4458 2026-09-01 05:07 ./usr/share/lammps/examples/mdi/log.17Jun22.snapshot.driver.mpi.3 -rw-r--r-- root/root 4943 2026-09-01 05:07 ./usr/share/lammps/examples/mdi/log.17Jun22.snapshot.driver.plugin.1 -rw-r--r-- root/root 4949 2026-09-01 05:07 ./usr/share/lammps/examples/mdi/log.17Jun22.snapshot.driver.plugin.3 -rw-r--r-- root/root 4456 2026-09-01 05:07 ./usr/share/lammps/examples/mdi/log.17Jun22.snapshot.driver.tcp.1 -rw-r--r-- root/root 4452 2026-09-01 05:07 ./usr/share/lammps/examples/mdi/log.17Jun22.snapshot.driver.tcp.3 -rw-r--r-- root/root 1644 2026-09-01 05:07 ./usr/share/lammps/examples/mdi/log.17Jun22.snapshot.engine.mpi.1 -rw-r--r-- root/root 1644 2026-09-01 05:07 ./usr/share/lammps/examples/mdi/log.17Jun22.snapshot.engine.mpi.3 -rw-r--r-- root/root 1644 2026-09-01 05:07 ./usr/share/lammps/examples/mdi/log.17Jun22.snapshot.engine.plugin.1 -rw-r--r-- root/root 1643 2026-09-01 05:07 ./usr/share/lammps/examples/mdi/log.17Jun22.snapshot.engine.plugin.3 -rw-r--r-- root/root 1644 2026-09-01 05:07 ./usr/share/lammps/examples/mdi/log.17Jun22.snapshot.engine.tcp.1 -rw-r--r-- root/root 1644 2026-09-01 05:07 ./usr/share/lammps/examples/mdi/log.17Jun22.snapshot.engine.tcp.4 -rw-r--r-- root/root 8133 2026-09-01 05:07 ./usr/share/lammps/examples/mdi/sequence_driver.py drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/meam/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/meam/Ni.meam -> ../../potentials/Ni.meam lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/meam/SiC.meam -> ../../potentials/SiC.meam -rw-r--r-- root/root 7096 2026-09-01 05:07 ./usr/share/lammps/examples/meam/data.meam -rw-r--r-- root/root 678 2026-09-01 05:07 ./usr/share/lammps/examples/meam/in.meam -rw-r--r-- root/root 1574 2026-09-01 05:07 ./usr/share/lammps/examples/meam/in.meam.shear lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/meam/library.meam -> ../../potentials/library.meam -rw-r--r-- root/root 3441 2026-09-01 05:07 ./usr/share/lammps/examples/meam/log.27Nov18.meam.g++.1 -rw-r--r-- root/root 3437 2026-09-01 05:07 ./usr/share/lammps/examples/meam/log.27Nov18.meam.g++.4 -rw-r--r-- root/root 8486 2026-09-01 05:07 ./usr/share/lammps/examples/meam/log.27Nov18.meam.shear.g++.1 -rw-r--r-- root/root 8480 2026-09-01 05:07 ./usr/share/lammps/examples/meam/log.27Nov18.meam.shear.g++.4 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/meam/msmeam/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/meam/msmeam/HGa.msmeam -> ../../../potentials/HGa.msmeam -rw-r--r-- root/root 91 2026-09-01 05:07 ./usr/share/lammps/examples/meam/msmeam/README.md -rw-r--r-- root/root 1126 2026-09-01 05:07 ./usr/share/lammps/examples/meam/msmeam/dump.msmeam.bu -rw-r--r-- root/root 897 2026-09-01 05:07 ./usr/share/lammps/examples/meam/msmeam/in.msmeam lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/meam/msmeam/library.msmeam -> ../../../potentials/library.msmeam -rw-r--r-- root/root 5071 2026-09-01 05:07 ./usr/share/lammps/examples/meam/msmeam/log.27Sep2024.msmeam.g++.1 -rw-r--r-- root/root 5070 2026-09-01 05:07 ./usr/share/lammps/examples/meam/msmeam/log.27Sep2024.msmeam.g++.4 -rw-r--r-- root/root 685 2026-09-01 05:07 ./usr/share/lammps/examples/meam/msmeam/potential.mod drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/melt/ -rw-r--r-- root/root 736 2026-09-01 05:07 ./usr/share/lammps/examples/melt/in.melt -rw-r--r-- root/root 2966 2026-09-01 05:07 ./usr/share/lammps/examples/melt/log.8Apr21.melt.g++.1 -rw-r--r-- root/root 2967 2026-09-01 05:07 ./usr/share/lammps/examples/melt/log.8Apr21.melt.g++.4 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/mesh/ -rw-r--r-- root/root 1066 2026-09-01 05:07 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./usr/share/lammps/examples/mliap/Ta06A.pytorch.mliap -> ../../potentials/Ta06A.pytorch.mliap -rw-r--r-- root/root 3914 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/Ta_ACE.mliap.pytorch.model.pt lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/mliap/W.quadratic.mliap -> ../../potentials/W.quadratic.mliap lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/mliap/W.quadratic.mliap.descriptor -> ../../potentials/W.quadratic.mliap.descriptor lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/mliap/W.quadratic.mliap.model -> ../../potentials/W.quadratic.mliap.model lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/mliap/WBe_Wood_PRB2019.mliap -> ../../potentials/WBe_Wood_PRB2019.mliap lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/mliap/WBe_Wood_PRB2019.mliap.descriptor -> ../../potentials/WBe_Wood_PRB2019.mliap.descriptor lrwxrwxrwx root/root 0 2026-09-25 21:00 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root/root 3138 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/in.mliap.quadratic.compute -rw-r--r-- root/root 1055 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/in.mliap.snap.Ta06A -rw-r--r-- root/root 1214 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/in.mliap.snap.WBe.PRB2019 -rw-r--r-- root/root 823 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/in.mliap.snap.chem -rw-r--r-- root/root 3083 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/in.mliap.snap.compute -rw-r--r-- root/root 1073 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/in.mliap.snap.quadratic -rw-r--r-- root/root 552 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/in.mliap.so3.Ni_Mo -rw-r--r-- root/root 1217 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/in.mliap.so3.nn.Si -rw-r--r-- root/root 1140 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/in.mliap.unified.lj.Ar drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/jax/ -rw-r--r-- root/root 2608 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/jax/README.md -rw-r--r-- root/root 262 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/jax/deploy_script.py -rw-r--r-- root/root 825 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/jax/in.run -rw-r--r-- root/root 234 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/jax/mliap_jax.pkl -rw-r--r-- root/root 1910 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/jax/mliap_unified_jax.py -rw-r--r-- root/root 181 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/jax/mliap_unified_jax_Ar.pkl -rw-r--r-- root/root 2236 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/jax/mliap_unified_jax_kokkos.py -rw-r--r-- root/root 2748 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/jax/write_unified.py -rw-r--r-- root/root 51887 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/linear_ACE_ccs.yace -rw-r--r-- root/root 9255 2026-09-01 05:07 ./usr/share/lammps/examples/mliap/linear_ACE_coeff.acecoeff -rw-r--r-- root/root 10589 2026-09-01 05:07 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2026-09-01 05:07 ./usr/share/lammps/examples/reaxff/VOH/lmp_control -rw-r--r-- root/root 5553 2026-09-01 05:07 ./usr/share/lammps/examples/reaxff/VOH/log.30Nov23.VOH.g++.1 -rw-r--r-- root/root 5553 2026-09-01 05:07 ./usr/share/lammps/examples/reaxff/VOH/log.30Nov23.VOH.g++.4 -rw-r--r-- root/root 96 2026-09-01 05:07 ./usr/share/lammps/examples/reaxff/VOH/param.qeq drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/reaxff/ZnOH2/ -rw-r--r-- root/root 1027 2026-09-01 05:07 ./usr/share/lammps/examples/reaxff/ZnOH2/README -rw-r--r-- root/root 4338 2026-09-01 05:07 ./usr/share/lammps/examples/reaxff/ZnOH2/data.ZnOH2 -rw-r--r-- root/root 8096 2026-09-01 05:07 ./usr/share/lammps/examples/reaxff/ZnOH2/ffield.reax.ZnOH -rw-r--r-- root/root 501 2026-09-01 05:07 ./usr/share/lammps/examples/reaxff/ZnOH2/in.ZnOH2 -rw-r--r-- root/root 365 2026-09-01 05:07 ./usr/share/lammps/examples/reaxff/ZnOH2/lmp_control -rw-r--r-- root/root 4685 2026-09-01 05:07 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./usr/share/lammps/examples/reaxff/log.1Feb25.reaxff.rdx-shielded.g++.1 -rw-r--r-- root/root 8641 2026-09-01 05:07 ./usr/share/lammps/examples/reaxff/log.1Feb25.reaxff.rdx-shielded.g++.4 -rw-r--r-- root/root 8884 2026-09-01 05:07 ./usr/share/lammps/examples/reaxff/log.1Feb25.reaxff.rdx.g++.1 -rw-r--r-- root/root 8884 2026-09-01 05:07 ./usr/share/lammps/examples/reaxff/log.1Feb25.reaxff.rdx.g++.4 -rw-r--r-- root/root 7427 2026-09-01 05:07 ./usr/share/lammps/examples/reaxff/log.1Feb25.reaxff.tatb-shielded.g++.1 -rw-r--r-- root/root 7429 2026-09-01 05:07 ./usr/share/lammps/examples/reaxff/log.1Feb25.reaxff.tatb-shielded.g++.4 -rw-r--r-- root/root 7929 2026-09-01 05:07 ./usr/share/lammps/examples/reaxff/log.1Feb25.reaxff.tatb.g++.1 -rw-r--r-- root/root 7928 2026-09-01 05:07 ./usr/share/lammps/examples/reaxff/log.1Feb25.reaxff.tatb.g++.4 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/reaxff/water/ lrwxrwxrwx root/root 0 2026-09-25 21:00 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./usr/share/lammps/examples/rheo/dam-break/log.17Apr2024.dam.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/rheo/ice-cubes/ -rw-r--r-- root/root 2902 2026-09-01 05:07 ./usr/share/lammps/examples/rheo/ice-cubes/in.rheo.ice.cubes -rw-r--r-- root/root 20469 2026-09-01 05:07 ./usr/share/lammps/examples/rheo/ice-cubes/log.22Jul2025.ice.g++.1 -rw-r--r-- root/root 6039 2026-09-01 05:07 ./usr/share/lammps/examples/rheo/ice-cubes/square.mol drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/rheo/oxidation/ -rw-r--r-- root/root 3729 2026-09-01 05:07 ./usr/share/lammps/examples/rheo/oxidation/in.rheo.oxidation -rw-r--r-- root/root 26500 2026-09-01 05:07 ./usr/share/lammps/examples/rheo/oxidation/log.22Jul2025.oxidation.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/rheo/poiseuille/ -rw-r--r-- root/root 2148 2026-09-01 05:07 ./usr/share/lammps/examples/rheo/poiseuille/in.rheo.poiseuille -rw-r--r-- root/root 12112 2026-09-01 05:07 ./usr/share/lammps/examples/rheo/poiseuille/log.17Apr2024.poiseuille.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/rheo/taylor-green/ -rw-r--r-- root/root 1803 2026-09-01 05:07 ./usr/share/lammps/examples/rheo/taylor-green/in.rheo.taylor.green -rw-r--r-- root/root 9192 2026-09-01 05:07 ./usr/share/lammps/examples/rheo/taylor-green/log.17Apr2024.taylor.green.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/ -rw-r--r-- root/root 400 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/bodies.txt -rw-r--r-- root/root 1594 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/bodyinfo.dat -rw-r--r-- root/root 425 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/connected-bodies.dat -rw-r--r-- root/root 469 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/connected-bodies2.dat -rw-r--r-- root/root 2911 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/data.rigid -rw-r--r-- root/root 1577 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/data.rigid-property -rw-r--r-- root/root 3397 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/data.rigid.small -rw-r--r-- root/root 146544 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/data.rigid.tnr -rw-r--r-- root/root 1393 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/in.rigid -rw-r--r-- root/root 1374 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/in.rigid.atomfile -rw-r--r-- root/root 1521 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/in.rigid.atomvar -rw-r--r-- root/root 1424 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/in.rigid.early -rw-r--r-- root/root 1882 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/in.rigid.gravity -rw-r--r-- root/root 1439 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/in.rigid.infile -rw-r--r-- root/root 1311 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/in.rigid.molecule -rw-r--r-- root/root 1397 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/in.rigid.nve -rw-r--r-- root/root 1428 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/in.rigid.nve.early -rw-r--r-- root/root 1462 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/in.rigid.property -rw-r--r-- root/root 1317 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/in.rigid.small -rw-r--r-- root/root 1337 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/in.rigid.small.infile -rw-r--r-- root/root 1776 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/in.rigid.tnr -rw-r--r-- root/root 9886 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.15Jul25.rigid.gravity.g++.1 -rw-r--r-- root/root 9884 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.15Jul25.rigid.gravity.g++.4 -rw-r--r-- root/root 18930 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.20Mar22.rigid.infile.g++.1 -rw-r--r-- root/root 18927 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.20Mar22.rigid.infile.g++.4 -rw-r--r-- root/root 19992 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.20Mar22.rigid.molecule.g++.1 -rw-r--r-- root/root 19990 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.20Mar22.rigid.molecule.g++.4 -rw-r--r-- root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.20Mar22.rigid.rigid.molecule.g++.1 -rw-r--r-- root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.20Mar22.rigid.rigid.molecule.g++.4 -rw-r--r-- root/root 19179 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.20Mar22.rigid.small.g++.1 -rw-r--r-- root/root 19179 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.20Mar22.rigid.small.g++.4 -rw-r--r-- root/root 19262 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.20Mar22.rigid.small.infile.g++.1 -rw-r--r-- root/root 19259 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.20Mar22.rigid.small.infile.g++.4 -rw-r--r-- root/root 18984 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.27Nov18.rigid.atomfile.g++.1 -rw-r--r-- root/root 18991 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.27Nov18.rigid.atomfile.g++.4 -rw-r--r-- root/root 19130 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.27Nov18.rigid.atomvar.g++.1 -rw-r--r-- root/root 19138 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.27Nov18.rigid.atomvar.g++.4 -rw-r--r-- root/root 19020 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.27Nov18.rigid.early.g++.1 -rw-r--r-- root/root 19027 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.27Nov18.rigid.early.g++.4 -rw-r--r-- root/root 18989 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.27Nov18.rigid.g++.1 -rw-r--r-- root/root 18996 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.27Nov18.rigid.g++.4 -rw-r--r-- root/root 19039 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.27Nov18.rigid.nve.early.g++.1 -rw-r--r-- root/root 19043 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.27Nov18.rigid.nve.early.g++.4 -rw-r--r-- root/root 19008 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.27Nov18.rigid.nve.g++.1 -rw-r--r-- root/root 19012 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.27Nov18.rigid.nve.g++.4 -rw-r--r-- root/root 19072 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.27Nov18.rigid.property.g++.1 -rw-r--r-- root/root 19080 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.27Nov18.rigid.property.g++.4 -rw-r--r-- root/root 29551 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.27Nov18.rigid.tnr.g++.1 -rw-r--r-- root/root 29569 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/log.27Nov18.rigid.tnr.g++.4 -rw-r--r-- root/root 519 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/molecule.data -rw-r--r-- root/root 396 2026-09-01 05:07 ./usr/share/lammps/examples/rigid/unconnected-bodies.dat drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/shear/ -rw-r--r-- root/root 36573 2026-09-01 05:07 ./usr/share/lammps/examples/shear/Ni_u3.eam -rw-r--r-- root/root 1541 2026-09-01 05:07 ./usr/share/lammps/examples/shear/in.shear -rw-r--r-- root/root 1551 2026-09-01 05:07 ./usr/share/lammps/examples/shear/in.shear.void -rw-r--r-- root/root 8113 2026-09-01 05:07 ./usr/share/lammps/examples/shear/log.27Nov18.shear.g++.1 -rw-r--r-- root/root 8123 2026-09-01 05:07 ./usr/share/lammps/examples/shear/log.27Nov18.shear.g++.4 -rw-r--r-- root/root 8166 2026-09-01 05:07 ./usr/share/lammps/examples/shear/log.27Nov18.shear.void.g++.1 -rw-r--r-- root/root 8164 2026-09-01 05:07 ./usr/share/lammps/examples/shear/log.27Nov18.shear.void.g++.4 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/C_SNAP_2021.10.15.quadratic.snapcoeff -> ../../potentials/C_SNAP_2021.10.15.quadratic.snapcoeff lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/C_SNAP_2021.10.15.quadratic.snapparam -> ../../potentials/C_SNAP_2021.10.15.quadratic.snapparam lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/He_He_JW2013.table -> ../../potentials/He_He_JW2013.table lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/InP_JCPA2020.snap -> ../../potentials/InP_JCPA2020.snap lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/InP_JCPA2020.snapcoeff -> ../../potentials/InP_JCPA2020.snapcoeff lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/InP_JCPA2020.snapparam -> ../../potentials/InP_JCPA2020.snapparam lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/Mo_Chen_PRM2017.snap -> ../../potentials/Mo_Chen_PRM2017.snap lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/Mo_Chen_PRM2017.snapcoeff -> ../../potentials/Mo_Chen_PRM2017.snapcoeff lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/Mo_Chen_PRM2017.snapparam -> ../../potentials/Mo_Chen_PRM2017.snapparam lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/Ni_Zuo_JPCA2020.quadratic.snapcoeff -> ../../potentials/Ni_Zuo_JPCA2020.quadratic.snapcoeff lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/Ni_Zuo_JPCA2020.quadratic.snapparam -> ../../potentials/Ni_Zuo_JPCA2020.quadratic.snapparam lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/Ni_Zuo_JPCA2020.snapcoeff -> ../../potentials/Ni_Zuo_JPCA2020.snapcoeff lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/Ni_Zuo_JPCA2020.snapparam -> ../../potentials/Ni_Zuo_JPCA2020.snapparam -rw-r--r-- root/root 1202 2026-09-01 05:07 ./usr/share/lammps/examples/snap/README.md lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/Ta06A.snap -> ../../potentials/Ta06A.snap lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/Ta06A.snapcoeff -> ../../potentials/Ta06A.snapcoeff lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/Ta06A.snapparam -> ../../potentials/Ta06A.snapparam lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/WBe_Wood_PRB2019.snap -> ../../potentials/WBe_Wood_PRB2019.snap lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/WBe_Wood_PRB2019.snapcoeff -> ../../potentials/WBe_Wood_PRB2019.snapcoeff lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/WBe_Wood_PRB2019.snapparam -> ../../potentials/WBe_Wood_PRB2019.snapparam lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/W_2940_2017_2.snap -> ../../potentials/W_2940_2017_2.snap lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/W_2940_2017_2.snapcoeff -> ../../potentials/W_2940_2017_2.snapcoeff lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/W_2940_2017_2.snapparam -> ../../potentials/W_2940_2017_2.snapparam lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/W_2940_2017_2_He_JW2013.snap -> ../../potentials/W_2940_2017_2_He_JW2013.snap lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/snap/W_He_JW2013.table -> ../../potentials/W_He_JW2013.table -rw-r--r-- root/root 4553 2026-09-01 05:07 ./usr/share/lammps/examples/snap/compute_snap_dgrad.py -rw-r--r-- root/root 1058 2026-09-01 05:07 ./usr/share/lammps/examples/snap/in.C_SNAP -rw-r--r-- root/root 1660 2026-09-01 05:07 ./usr/share/lammps/examples/snap/in.gaussian.grid -rw-r--r-- root/root 803 2026-09-01 05:07 ./usr/share/lammps/examples/snap/in.snap.InP.JCPA2020 -rw-r--r-- root/root 749 2026-09-01 05:07 ./usr/share/lammps/examples/snap/in.snap.Mo_Chen -rw-r--r-- root/root 739 2026-09-01 05:07 ./usr/share/lammps/examples/snap/in.snap.Ta06A -rw-r--r-- root/root 747 2026-09-01 05:07 ./usr/share/lammps/examples/snap/in.snap.W.2940 -rw-r--r-- root/root 902 2026-09-01 05:07 ./usr/share/lammps/examples/snap/in.snap.WBe.PRB2019 -rw-r--r-- root/root 2753 2026-09-01 05:07 ./usr/share/lammps/examples/snap/in.snap.compute -rw-r--r-- root/root 2783 2026-09-01 05:07 ./usr/share/lammps/examples/snap/in.snap.compute.quadratic -rw-r--r-- root/root 2316 2026-09-01 05:07 ./usr/share/lammps/examples/snap/in.snap.grid -rw-r--r-- root/root 2946 2026-09-01 05:07 ./usr/share/lammps/examples/snap/in.snap.grid.triclinic -rw-r--r-- root/root 931 2026-09-01 05:07 ./usr/share/lammps/examples/snap/in.snap.hybrid.WSNAP.HePair -rw-r--r-- root/root 1323 2026-09-01 05:07 ./usr/share/lammps/examples/snap/in.snap.scale.Ni_Zuo_JCPA2020 -rw-r--r-- root/root 7306 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.03Jul20.snap.compute.g++.1 -rw-r--r-- root/root 7401 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.03Jul20.snap.compute.g++.4 -rw-r--r-- root/root 7341 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.03Jul20.snap.compute.quadratic.g++.1 -rw-r--r-- root/root 7437 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.03Jul20.snap.compute.quadratic.g++.4 -rw-r--r-- root/root 4718 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.10Dec24.gaussian.grid.g++.1 -rw-r--r-- root/root 4811 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.10Dec24.gaussian.grid.g++.4 -rw-r--r-- root/root 5340 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.15Jun20.snap.InP.JCPA2020.g++.1 -rw-r--r-- root/root 5338 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.15Jun20.snap.InP.JCPA2020.g++.4 -rw-r--r-- root/root 4345 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.15Jun20.snap.Mo_Chen.g++.1 -rw-r--r-- root/root 4343 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.15Jun20.snap.Mo_Chen.g++.4 -rw-r--r-- root/root 4805 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.15Jun20.snap.Ta06A.g++.1 -rw-r--r-- root/root 4800 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.15Jun20.snap.Ta06A.g++.4 -rw-r--r-- root/root 4936 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.15Jun20.snap.W.2940.g++.1 -rw-r--r-- root/root 4931 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.15Jun20.snap.W.2940.g++.4 -rw-r--r-- root/root 5286 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.15Jun20.snap.WBe.PRB2019.g++.1 -rw-r--r-- root/root 5281 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.15Jun20.snap.WBe.PRB2019.g++.4 -rw-r--r-- root/root 6631 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.15Jun20.snap.hybrid.WSNAP.HePair.g++.1 -rw-r--r-- root/root 6630 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.15Jun20.snap.hybrid.WSNAP.HePair.g++.4 -rw-r--r-- root/root 6702 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.15Jun22.grid.snap.g++.1 -rw-r--r-- root/root 6798 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.15Jun22.grid.snap.g++.4 -rw-r--r-- root/root 7859 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.15Jun22.grid.tri.g++.1 -rw-r--r-- root/root 7858 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.15Jun22.grid.tri.g++.4 -rw-r--r-- root/root 5049 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.30May23.C_SNAP.g++.1 -rw-r--r-- root/root 5042 2026-09-01 05:07 ./usr/share/lammps/examples/snap/log.30May23.C_SNAP.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/srd/ -rw-r--r-- root/root 2106 2026-09-01 05:07 ./usr/share/lammps/examples/srd/in.srd.mixture -rw-r--r-- root/root 1010 2026-09-01 05:07 ./usr/share/lammps/examples/srd/in.srd.pure -rw-r--r-- root/root 17978 2026-09-01 05:07 ./usr/share/lammps/examples/srd/log.27Nov18.srd.mixture.g++.1 -rw-r--r-- root/root 17986 2026-09-01 05:07 ./usr/share/lammps/examples/srd/log.27Nov18.srd.mixture.g++.4 -rw-r--r-- root/root 8213 2026-09-01 05:07 ./usr/share/lammps/examples/srd/log.27Nov18.srd.pure.g++.1 -rw-r--r-- root/root 8212 2026-09-01 05:07 ./usr/share/lammps/examples/srd/log.27Nov18.srd.pure.g++.4 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/steinhardt/ -rw-r--r-- root/root 2696 2026-09-01 05:07 ./usr/share/lammps/examples/steinhardt/in.bcc -rw-r--r-- root/root 2518 2026-09-01 05:07 ./usr/share/lammps/examples/steinhardt/in.fcc -rw-r--r-- root/root 3100 2026-09-01 05:07 ./usr/share/lammps/examples/steinhardt/in.icos -rw-r--r-- root/root 6050 2026-09-01 05:07 ./usr/share/lammps/examples/steinhardt/log.13Sept18.bcc.g++.1 -rw-r--r-- root/root 6050 2026-09-01 05:07 ./usr/share/lammps/examples/steinhardt/log.13Sept18.bcc.g++.4 -rw-r--r-- root/root 5788 2026-09-01 05:07 ./usr/share/lammps/examples/steinhardt/log.13Sept18.fcc.g++.1 -rw-r--r-- root/root 5781 2026-09-01 05:07 ./usr/share/lammps/examples/steinhardt/log.13Sept18.fcc.g++.4 -rw-r--r-- root/root 8341 2026-09-01 05:07 ./usr/share/lammps/examples/steinhardt/log.13Sept18.icos.g++.1 -rw-r--r-- root/root 8350 2026-09-01 05:07 ./usr/share/lammps/examples/steinhardt/log.13Sept18.icos.g++.4 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/streitz/ -rw-r--r-- root/root 170686 2026-09-01 05:07 ./usr/share/lammps/examples/streitz/AlO.eam.alloy -rw-r--r-- root/root 455 2026-09-01 05:07 ./usr/share/lammps/examples/streitz/AlO.streitz lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/streitz/GaN.streitz -> ../../potentials/GaN.streitz lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/streitz/GaN.streitz+tersoff.mod -> ../../potentials/GaN.streitz+tersoff.mod lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/streitz/NiO.ctip -> ../../potentials/NiO.ctip lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/streitz/NiO.eam.fs -> ../../potentials/NiO.eam.fs -rw-r--r-- root/root 109682 2026-09-01 05:07 ./usr/share/lammps/examples/streitz/data.ctip -rw-r--r-- root/root 144528 2026-09-01 05:07 ./usr/share/lammps/examples/streitz/data.streitz -rw-r--r-- root/root 1007 2026-09-01 05:07 ./usr/share/lammps/examples/streitz/in.ctip -rw-r--r-- root/root 2289 2026-09-01 05:07 ./usr/share/lammps/examples/streitz/in.gan -rw-r--r-- root/root 1469 2026-09-01 05:07 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05:07 ./usr/share/lammps/examples/stress_vcm/README -rw-r--r-- root/root 3528 2026-09-01 05:07 ./usr/share/lammps/examples/stress_vcm/in.stress_vcm -rw-r--r-- root/root 12906 2026-09-01 05:07 ./usr/share/lammps/examples/stress_vcm/log.19Nov24.stress_vcm.g++.1 -rw-r--r-- root/root 12919 2026-09-01 05:07 ./usr/share/lammps/examples/stress_vcm/log.19Nov24.stress_vcm.g++.4 -rw-r--r-- root/root 90891 2026-09-01 05:07 ./usr/share/lammps/examples/stress_vcm/stress_comparison.19Nov24.png -rw-r--r-- root/root 3585 2026-09-01 05:07 ./usr/share/lammps/examples/stress_vcm/stress_xx.19Nov24.out drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/tad/ -rw-r--r-- root/root 125 2026-09-01 05:07 ./usr/share/lammps/examples/tad/README -rw-r--r-- root/root 782 2026-09-01 05:07 ./usr/share/lammps/examples/tad/Si.sw -rw-r--r-- root/root 2711 2026-09-01 05:07 ./usr/share/lammps/examples/tad/in.tad -rw-r--r-- root/root 1846 2026-09-01 05:07 ./usr/share/lammps/examples/tad/log.5Oct16.tad.g++.3 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/template/ -rw-r--r-- root/root 464 2026-09-01 05:07 ./usr/share/lammps/examples/template/co2.mol -rw-r--r-- root/root 745 2026-09-01 05:07 ./usr/share/lammps/examples/template/cyclohexane.mol -rw-r--r-- root/root 29198 2026-09-01 05:07 ./usr/share/lammps/examples/template/h2o-co2.data -rw-r--r-- root/root 514 2026-09-01 05:07 ./usr/share/lammps/examples/template/h2o.mol -rw-r--r-- root/root 799 2026-09-01 05:07 ./usr/share/lammps/examples/template/in.hybrid -rw-r--r-- root/root 465 2026-09-01 05:07 ./usr/share/lammps/examples/template/in.mol-data-mix -rw-r--r-- root/root 470 2026-09-01 05:07 ./usr/share/lammps/examples/template/in.mol-restart-mix -rw-r--r-- root/root 1114 2026-09-01 05:07 ./usr/share/lammps/examples/template/in.molecular-mix -rw-r--r-- root/root 1047 2026-09-01 05:07 ./usr/share/lammps/examples/template/in.template-mix -rw-r--r-- root/root 470 2026-09-01 05:07 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./usr/share/lammps/examples/tersoff/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/tersoff/BNC.tersoff -> ../../potentials/BNC.tersoff lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/tersoff/Si.tersoff -> ../../potentials/Si.tersoff lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/tersoff/Si.tersoff.mod -> ../../potentials/Si.tersoff.mod lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/tersoff/Si.tersoff.modc -> ../../potentials/Si.tersoff.modc -rw-r--r-- root/root 89120 2026-09-01 05:07 ./usr/share/lammps/examples/tersoff/hBN-monolayer-5nm.data -rw-r--r-- root/root 1183 2026-09-01 05:07 ./usr/share/lammps/examples/tersoff/in.hBN_shift -rw-r--r-- root/root 3482 2026-09-01 05:07 ./usr/share/lammps/examples/tersoff/in.tersoff -rw-r--r-- root/root 20678 2026-09-01 05:07 ./usr/share/lammps/examples/tersoff/log.09Feb21.tersoff.g++.1 -rw-r--r-- root/root 20678 2026-09-01 05:07 ./usr/share/lammps/examples/tersoff/log.09Feb21.tersoff.g++.4 -rw-r--r-- root/root 4333 2026-09-01 05:07 ./usr/share/lammps/examples/tersoff/log.13Jan21.hBN_shift.g++.1 -rw-r--r-- root/root 4333 2026-09-01 05:07 ./usr/share/lammps/examples/tersoff/log.13Jan21.hBN_shift.g++.4 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/threebody/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/threebody/BNC.tersoff -> ../../potentials/BNC.tersoff lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/threebody/CdTeZnSeHgS0.sw -> ../../potentials/CdTeZnSeHgS0.sw lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/threebody/InP.vashishta -> ../../potentials/InP.vashishta lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/threebody/MoS.rebomos -> ../../potentials/MoS.rebomos lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/threebody/Si.sw -> ../../potentials/Si.sw lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/lammps/examples/threebody/SiC.tersoff.zbl -> ../../potentials/SiC.tersoff.zbl -rw-r--r-- root/root 1051 2026-09-01 05:07 ./usr/share/lammps/examples/threebody/in.mos2-bulk -rw-r--r-- root/root 883 2026-09-01 05:07 ./usr/share/lammps/examples/threebody/in.mos2.rebomos -rw-r--r-- root/root 837 2026-09-01 05:07 ./usr/share/lammps/examples/threebody/in.mos2.sw.mod -rw-r--r-- root/root 3471 2026-09-01 05:07 ./usr/share/lammps/examples/threebody/in.threebody -rw-r--r-- root/root 4239 2026-09-01 05:07 ./usr/share/lammps/examples/threebody/log.08Oct24.mos2.sw.mod.g++.4 -rw-r--r-- root/root 10017 2026-09-01 05:07 ./usr/share/lammps/examples/threebody/log.22Feb24.mos2-bulk.g++.1 -rw-r--r-- root/root 10018 2026-09-01 05:07 ./usr/share/lammps/examples/threebody/log.22Feb24.mos2-bulk.g++.4 -rw-r--r-- root/root 3950 2026-09-01 05:07 ./usr/share/lammps/examples/threebody/log.22Feb24.mos2.rebomos.g++.1 -rw-r--r-- root/root 3950 2026-09-01 05:07 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root/root 4973 2026-09-01 05:07 ./usr/share/lammps/examples/tracker/log.29Aug24.tracker.g++.1 drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/tracker/reference/ -rw-r--r-- root/root 143115 2026-09-01 05:07 ./usr/share/lammps/examples/tracker/reference/contact_history.dat -rw-r--r-- root/root 1053 2026-09-01 05:07 ./usr/share/lammps/examples/tracker/reference/lifetime_hist.dat drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/triclinic/ -rw-r--r-- root/root 4221 2026-09-01 05:07 ./usr/share/lammps/examples/triclinic/README -rw-r--r-- root/root 330 2026-09-01 05:07 ./usr/share/lammps/examples/triclinic/data.8Apr24.bcc.orthog.g++.1 -rw-r--r-- root/root 330 2026-09-01 05:07 ./usr/share/lammps/examples/triclinic/data.8Apr24.bcc.orthog.g++.4 -rw-r--r-- root/root 374 2026-09-01 05:07 ./usr/share/lammps/examples/triclinic/data.8Apr24.bcc.primitive.g++.1 -rw-r--r-- root/root 374 2026-09-01 05:07 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2026-09-01 05:07 ./usr/share/lammps/examples/wall/walltab.dat drwxr-xr-x root/root 0 2026-09-01 05:07 ./usr/share/lammps/examples/yaml/ -rw-r--r-- root/root 858 2026-09-01 05:07 ./usr/share/lammps/examples/yaml/in.yaml -rw-r--r-- root/root 7357 2026-09-01 05:07 ./usr/share/lammps/examples/yaml/log.7Apr22.yaml.g++.1 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lintian/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 25 2026-09-25 21:00 ./usr/share/lintian/overrides/lammps-examples lammps_20260704+dfsg-2_amd64.deb -------------------------------- new Debian package, version 2.0. size 20816 bytes: control archive=1160 bytes. 51 bytes, 2 lines conffiles 1150 bytes, 24 lines control 317 bytes, 5 lines md5sums Package: lammps Version: 20260704+dfsg-2 Architecture: amd64 Maintainer: Debian Science Maintainers Installed-Size: 69 Depends: lammps-data, libc6 (>= 2.34), libgcc-s1 (>= 3.0), liblammps0t64 (>= 20260704+dfsg), libopenmpi40 (>= 5.0.11), libstdc++6 (>= 5.2), mpi-default-bin Recommends: lammps-doc Suggests: python3, openkim-models Section: science Priority: optional Homepage: https://lammps.sandia.gov/ Description: Molecular Dynamics Simulator LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator. . LAMMPS has potentials for soft materials (biomolecules, polymers) and solid-state materials (metals, semiconductors) and coarse-grained or mesoscopic systems. It can be used to model atoms or, more generically, as a parallel particle simulator at the atomic, meso, or continuum scale. . LAMMPS runs on single processors or in parallel using message-passing techniques and a spatial-decomposition of the simulation domain. The code is designed to be easy to modify or extend with new functionality. Commands: lmp drwxr-xr-x root/root 0 2026-09-25 21:00 ./ drwxr-xr-x root/root 0 2026-09-25 21:00 ./etc/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./etc/profile.d/ -rw-r--r-- root/root 256 2026-09-25 21:00 ./etc/profile.d/lammps.csh -rw-r--r-- root/root 257 2026-09-25 21:00 ./etc/profile.d/lammps.sh drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/bin/ -rwxr-xr-x root/root 18960 2026-09-25 21:00 ./usr/bin/lmp drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/doc/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/doc/lammps/ -rw-r--r-- root/root 3380 2026-09-25 21:00 ./usr/share/doc/lammps/changelog.Debian.gz -rw-r--r-- root/root 24008 2026-09-25 21:00 ./usr/share/doc/lammps/copyright drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lintian/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 53 2026-09-25 21:00 ./usr/share/lintian/overrides/lammps drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/man/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/man/man1/ -rw-r--r-- root/root 5105 2026-09-25 21:00 ./usr/share/man/man1/lmp.1.gz liblammps-dev_20260704+dfsg-2_amd64.deb --------------------------------------- new Debian package, version 2.0. size 226720 bytes: control archive=2296 bytes. 1154 bytes, 26 lines control 3320 bytes, 50 lines md5sums Package: liblammps-dev Source: lammps Version: 20260704+dfsg-2 Architecture: amd64 Maintainer: Debian Science Maintainers Installed-Size: 1557 Depends: liblammps0t64 (= 20260704+dfsg-2), mpi-default-dev Recommends: lammps-doc Section: science Priority: optional Homepage: https://lammps.sandia.gov/ Description: Molecular Dynamics Simulator (dev files) LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator. . LAMMPS has potentials for soft materials (biomolecules, polymers) and solid-state materials (metals, semiconductors) and coarse-grained or mesoscopic systems. It can be used to model atoms or, more generically, as a parallel particle simulator at the atomic, meso, or continuum scale. . LAMMPS runs on single processors or in parallel using message-passing techniques and a spatial-decomposition of the simulation domain. The code is designed to be easy to modify or extend with new functionality. . This package contains development files and headers to build applications using the LAMMPS shared library. drwxr-xr-x root/root 0 2026-09-25 21:00 ./ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/include/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/include/lammps/ -rw-r--r-- root/root 3514 2026-09-01 05:07 ./usr/include/lammps/angle.h -rw-r--r-- root/root 14034 2026-09-01 05:07 ./usr/include/lammps/atom.h -rw-r--r-- root/root 3848 2026-09-01 05:07 ./usr/include/lammps/bond.h -rw-r--r-- root/root 3284 2026-09-01 05:07 ./usr/include/lammps/citeme.h -rw-r--r-- root/root 7909 2026-09-01 05:07 ./usr/include/lammps/comm.h -rw-r--r-- root/root 1099 2026-09-01 05:07 ./usr/include/lammps/command.h -rw-r--r-- root/root 8376 2026-09-01 05:07 ./usr/include/lammps/compute.h -rw-r--r-- root/root 3365 2026-09-01 05:07 ./usr/include/lammps/dihedral.h -rw-r--r-- root/root 7956 2026-09-01 05:07 ./usr/include/lammps/domain.h -rw-r--r-- root/root 4012 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./usr/share/doc/liblammps-dev/copyright liblammps0t64-dbgsym_20260704+dfsg-2_amd64.deb ---------------------------------------------- new Debian package, version 2.0. size 78569124 bytes: control archive=560 bytes. 429 bytes, 13 lines control 106 bytes, 1 lines md5sums Package: liblammps0t64-dbgsym Source: lammps Version: 20260704+dfsg-2 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian Science Maintainers Installed-Size: 80035 Depends: liblammps0t64 (= 20260704+dfsg-2) Section: debug Priority: optional Multi-Arch: same Description: debug symbols for liblammps0t64 Build-Ids: 729d25da61b93839f42f9faf11e9972c8d5c9871 drwxr-xr-x root/root 0 2026-09-25 21:00 ./ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/lib/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/lib/debug/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/lib/debug/.build-id/72/ -rw-r--r-- root/root 81945104 2026-09-25 21:00 ./usr/lib/debug/.build-id/72/9d25da61b93839f42f9faf11e9972c8d5c9871.debug drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/doc/ lrwxrwxrwx root/root 0 2026-09-25 21:00 ./usr/share/doc/liblammps0t64-dbgsym -> liblammps0t64 liblammps0t64_20260704+dfsg-2_amd64.deb --------------------------------------- new Debian package, version 2.0. size 7522472 bytes: control archive=1376 bytes. 1553 bytes, 28 lines control 304 bytes, 4 lines md5sums 45 bytes, 1 lines shlibs 65 bytes, 2 lines triggers Package: liblammps0t64 Source: lammps Version: 20260704+dfsg-2 Architecture: amd64 Maintainer: Debian Science Maintainers Installed-Size: 30625 Depends: libc6 (>= 2.38), libcurl4-gnutls (>= 8.20.0-3~), libfftw3-double3 (>= 3.3.11), libgcc-s1 (>= 4.0), libgomp1 (>= 6), libhdf5-320 (>= 2.1.0), libkim-api2 (>= 2.4.1), liblapack3 | liblapack.so.3, libnetcdf22 (>= 4.0.1), libopenmpi40 (>= 5.0.11), libpnetcdf8 (>= 1.15.0), libpython3.14 (>= 3.14.1), libstdc++6 (>= 14), libvoro++1 (>= 0.4.6), libvtk9.6 (>= 9.6.2+dfsg1), libzstd1 (>= 1.5.5), zlib1g (>= 1:1.1.4) Breaks: liblammps0 (<< 20260704+dfsg-2) Replaces: liblammps0 Provides: liblammps0 (= 20260704+dfsg-2) Section: science Priority: optional Multi-Arch: same Homepage: https://lammps.sandia.gov/ Description: Molecular Dynamics Simulator (shared library) LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator. . LAMMPS has potentials for soft materials (biomolecules, polymers) and solid-state materials (metals, semiconductors) and coarse-grained or mesoscopic systems. It can be used to model atoms or, more generically, as a parallel particle simulator at the atomic, meso, or continuum scale. . LAMMPS runs on single processors or in parallel using message-passing techniques and a spatial-decomposition of the simulation domain. The code is designed to be easy to modify or extend with new functionality. . This package provides the LAMMPS shared library. drwxr-xr-x root/root 0 2026-09-25 21:00 ./ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/lib/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/lib/x86_64-linux-gnu/ -rw-r--r-- root/root 31317632 2026-09-25 21:00 ./usr/lib/x86_64-linux-gnu/liblammps.so.0 drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/doc/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/doc/liblammps0t64/ -rw-r--r-- root/root 3383 2026-09-25 21:00 ./usr/share/doc/liblammps0t64/changelog.Debian.gz -rw-r--r-- root/root 24008 2026-09-25 21:00 ./usr/share/doc/liblammps0t64/copyright drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lintian/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 113 2026-09-25 21:00 ./usr/share/lintian/overrides/liblammps0t64 python3-lammps_20260704+dfsg-2_amd64.deb ---------------------------------------- new Debian package, version 2.0. size 75104 bytes: control archive=2856 bytes. 1094 bytes, 25 lines control 5203 bytes, 59 lines md5sums 283 bytes, 12 lines * postinst #!/bin/sh 421 bytes, 12 lines * prerm #!/bin/sh Package: python3-lammps Source: lammps Version: 20260704+dfsg-2 Architecture: amd64 Maintainer: Debian Science Maintainers Installed-Size: 443 Depends: liblammps-dev, python3:any, mpi-default-bin Recommends: python3-mpi4py, lammps-doc Section: python Priority: optional Homepage: https://lammps.sandia.gov/ Description: Molecular Dynamics Simulator LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator. . LAMMPS has potentials for soft materials (biomolecules, polymers) and solid-state materials (metals, semiconductors) and coarse-grained or mesoscopic systems. It can be used to model atoms or, more generically, as a parallel particle simulator at the atomic, meso, or continuum scale. . LAMMPS runs on single processors or in parallel using message-passing techniques and a spatial-decomposition of the simulation domain. The code is designed to be easy to modify or extend with new functionality. . This package provides the Python module for LAMMPS. drwxr-xr-x root/root 0 2026-09-25 21:00 ./ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/lib/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/lib/python3/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/lib/python3/dist-packages/lammps-2026.7.4.dist-info/ -rw-r--r-- root/root 7 2026-09-25 21:00 ./usr/lib/python3/dist-packages/lammps-2026.7.4.dist-info/INSTALLER -rw-r--r-- root/root 6394 2026-09-25 21:00 ./usr/lib/python3/dist-packages/lammps-2026.7.4.dist-info/METADATA -rw-r--r-- root/root 7 2026-09-25 21:00 ./usr/lib/python3/dist-packages/lammps-2026.7.4.dist-info/top_level.txt drwxr-xr-x root/root 0 2026-09-25 21:00 ./usr/lib/python3/dist-packages/lammps/ -rw-r--r-- root/root 1515 2026-09-25 21:00 ./usr/lib/python3/dist-packages/lammps/__init__.py -rw-r--r-- root/root 2688 2026-09-25 21:00 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Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Sat, 26 Sep 2026 04:26:09 +0000 | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: full Build-Space: 2705424 Build-Time: 1256 Distribution: perl-5.44-throwaway Host Architecture: amd64 Install-Time: 158 Job: /srv/debomatic/incoming/lammps_20260704+dfsg-2.dsc Machine Architecture: amd64 Package: lammps Package-Time: 1424 Source-Version: 20260704+dfsg-2 Space: 2705424 Status: successful Version: 20260704+dfsg-2 -------------------------------------------------------------------------------- Finished at 2026-09-26T04:25:56Z Build needed 00:23:44, 2705424k disk space