Format: 1.0
Source: bioperl
Binary: bioperl libbio-perl-perl
Architecture: all source
Version: 1.7.8-4
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Checksums-Sha256:
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Build-Origin: Debian
Build-Architecture: amd64
Build-Date: Mon, 22 Jun 2026 04:03:56 +0000
Build-Path: /build/bioperl-25CYMk/bioperl-1.7.8
Build-Tainted-By:
 usr-local-has-programs
Installed-Build-Depends:
 autoconf (= 2.73-2),
 automake (= 1:1.18.1-4),
 autopoint (= 1.0-1),
 autotools-dev (= 20240727.1+nmu1),
 base-files (= 14.2),
 base-passwd (= 3.6.8),
 bash (= 5.3-3),
 binutils (= 2.46.50.20260617-1),
 binutils-common (= 2.46.50.20260617-1),
 binutils-x86-64-linux-gnu (= 2.46.50.20260617-1),
 bsdextrautils (= 2.42.2-1),
 build-essential (= 12.12),
 bzip2 (= 1.0.8-6+b2),
 ca-certificates (= 20260601),
 coreutils (= 9.10-1),
 cpp (= 4:15.2.0-5+b1),
 cpp-14 (= 14.3.0-16),
 cpp-14-x86-64-linux-gnu (= 14.3.0-16),
 cpp-15 (= 15.3.0-1),
 cpp-15-x86-64-linux-gnu (= 15.3.0-1),
 cpp-x86-64-linux-gnu (= 4:15.2.0-5+b1),
 dash (= 0.5.12-12),
 debconf (= 1.5.92),
 debhelper (= 14.1),
 debianutils (= 5.23.2),
 dh-autoreconf (= 22),
 dh-strip-nondeterminism (= 1.15.1-1),
 diffutils (= 1:3.12-1),
 dpkg (= 1.23.7),
 dpkg-dev (= 1.23.7),
 dwz (= 0.16-4),
 file (= 1:5.47-4),
 findutils (= 4.10.0-4),
 fontconfig (= 2.17.1-5),
 fontconfig-config (= 2.17.1-5),
 fonts-dejavu-core (= 2.37-9),
 fonts-dejavu-mono (= 2.37-9),
 g++ (= 4:15.2.0-5+b1),
 g++-15 (= 15.3.0-1),
 g++-15-x86-64-linux-gnu (= 15.3.0-1),
 g++-x86-64-linux-gnu (= 4:15.2.0-5+b1),
 gcc (= 4:15.2.0-5+b1),
 gcc-14 (= 14.3.0-16),
 gcc-14-base (= 14.3.0-16),
 gcc-14-x86-64-linux-gnu (= 14.3.0-16),
 gcc-15 (= 15.3.0-1),
 gcc-15-base (= 15.3.0-1),
 gcc-15-x86-64-linux-gnu (= 15.3.0-1),
 gcc-16-base (= 16.1.0-2),
 gcc-x86-64-linux-gnu (= 4:15.2.0-5+b1),
 gettext (= 1.0-1),
 gettext-base (= 1.0-1),
 graphviz (= 14.1.2-1+b2),
 graphviz-tools (= 14.1.2-1+b2),
 grep (= 3.12-1),
 groff-base (= 1.24.1-1),
 gzip (= 1.13-1),
 hostname (= 3.25),
 init-system-helpers (= 1.69),
 intltool-debian (= 0.35.0+20060710.6),
 libabsl20260107 (= 20260107.0-5),
 libace-perl (= 1.92-14+b1),
 libacl1 (= 2.3.2-3),
 libalgorithm-diff-perl (= 1.201-1),
 libalgorithm-munkres-perl (= 0.08-5),
 libann0 (= 1.1.2+doc-9+b1),
 libaom3 (= 3.13.1-2+b1),
 libarchive-zip-perl (= 1.68-1),
 libarray-compare-perl (= 3.0.8-1),
 libasan8 (= 16.1.0-2),
 libatomic1 (= 16.1.0-2),
 libattr1 (= 1:2.5.2-4),
 libaudit-common (= 1:4.1.2-1),
 libaudit1 (= 1:4.1.2-1+b1),
 libavif16 (= 1.4.1-1+b1),
 libb-hooks-op-check-perl (= 0.22-3+b5),
 libb2-1 (= 0.98.1-1.1+b3),
 libbinutils (= 2.46.50.20260617-1),
 libbio-alignio-stockholm-perl (= 1.7.3-2),
 libbio-asn1-entrezgene-perl (= 1.730-3),
 libbio-cluster-perl (= 1.7.3-6),
 libbio-perl-perl (= 1.7.8-4),
 libbio-samtools-perl (= 1.43-5+b2),
 libbio-variation-perl (= 1.7.5-3),
 libblkid1 (= 2.42.2-1),
 libbrotli1 (= 1.2.0-3),
 libbsd0 (= 0.12.2-3),
 libbz2-1.0 (= 1.0.8-6+b2),
 libc-bin (= 2.42-17),
 libc-dev-bin (= 2.42-17),
 libc-gconv-modules-extra (= 2.42-17),
 libc6 (= 2.42-17),
 libc6-dev (= 2.42-17),
 libcache-cache-perl (= 1.08-3),
 libcairo2 (= 1.18.4-3+b1),
 libcap-ng0 (= 0.9.3-1),
 libcapture-tiny-perl (= 0.50-1),
 libcc1-0 (= 16.1.0-2),
 libcdt6 (= 14.1.2-1+b2),
 libcgi-pm-perl (= 4.72-1),
 libcgraph8 (= 14.1.2-1+b2),
 libclass-data-inheritable-perl (= 0.10-1),
 libclass-inspector-perl (= 1.36-3),
 libclass-method-modifiers-perl (= 2.15-1),
 libclass-unload-perl (= 0.12-1),
 libclass-xsaccessor-perl (= 1.19-4+b6),
 libclone-perl (= 0.50-1+b1),
 libcom-err2 (= 1.47.4-1),
 libconvert-binary-c-perl (= 0.86-1+b1),
 libconvert-binhex-perl (= 1.125-3),
 libcrypt-rc4-perl (= 2.02-5),
 libcrypt1 (= 1:4.5.1-1+b1),
 libctf-nobfd0 (= 2.46.50.20260617-1),
 libctf0 (= 2.46.50.20260617-1),
 libdata-stag-perl (= 0.14-4),
 libdatrie1 (= 0.2.14-1+b1),
 libdav1d7 (= 1.5.3-1+b2),
 libdb5.3t64 (= 5.3.28+dfsg2-11+b1),
 libdbd-mysql-perl (= 4.055-1+b1),
 libdbd-pg-perl (= 3.20.2-1+b1),
 libdbd-sqlite3-perl (= 1.78-1+b2),
 libdbi-perl (= 1.648-1+b1),
 libdbus-1-3 (= 1.16.2-5+b1),
 libde265-0 (= 1.0.18-1),
 libdebconfclient0 (= 0.283),
 libdebhelper-perl (= 14.1),
 libdeflate0 (= 1.25-1),
 libdevel-callchecker-perl (= 0.009-3+b1),
 libdevel-cycle-perl (= 1.12-2),
 libdevel-stacktrace-perl (= 2.0500-1),
 libdigest-perl-md5-perl (= 1.91-1),
 libdouble-conversion3 (= 3.4.0-1+b1),
 libdpkg-perl (= 1.23.7),
 libdrm-amdgpu1 (= 2.4.134-1),
 libdrm-common (= 2.4.134-1),
 libdrm-intel1 (= 2.4.134-1),
 libdrm2 (= 2.4.134-1),
 libdynaloader-functions-perl (= 0.004-2),
 libedit2 (= 3.1-20260512-1),
 libegl-mesa0 (= 26.1.2-1),
 libegl1 (= 1.7.0-3+b1),
 libelf1t64 (= 0.195-1),
 libencode-locale-perl (= 1.05-3),
 liberror-perl (= 0.17030-1),
 libevdev2 (= 1.13.6+dfsg-2),
 libexception-class-perl (= 1.45-1),
 libexpat1 (= 2.8.1-1),
 libexporter-tiny-perl (= 1.006003-1),
 libfcgi-perl (= 0.82+ds-3+b3),
 libfcgi0t64 (= 2.4.5-0.1+b2),
 libffi8 (= 3.5.2-4),
 libfile-listing-perl (= 6.16-1),
 libfile-slurper-perl (= 0.014-1),
 libfile-stripnondeterminism-perl (= 1.15.1-1),
 libfontconfig1 (= 2.17.1-5),
 libfreetype6 (= 2.14.3+dfsg-1),
 libfribidi0 (= 1.0.16-5+b1),
 libgav1-2 (= 0.20.0-2+b1),
 libgbm1 (= 26.1.2-1),
 libgcc-14-dev (= 14.3.0-16),
 libgcc-15-dev (= 15.3.0-1),
 libgcc-s1 (= 16.1.0-2),
 libgd3 (= 2.3.3-13+b2),
 libgdbm-compat4t64 (= 1.26-1+b2),
 libgdbm6t64 (= 1.26-1+b2),
 libgl1-mesa-dri (= 26.1.2-1),
 libglib2.0-0t64 (= 2.88.1-2),
 libglvnd0 (= 1.7.0-3+b1),
 libglx-mesa0 (= 26.1.2-1),
 libglx0 (= 1.7.0-3+b1),
 libgmp10 (= 2:6.3.0+dfsg-5+b2),
 libgomp1 (= 16.1.0-2),
 libgprofng0 (= 2.46.50.20260617-1),
 libgraph-perl (= 1:0.9735-1),
 libgraphite2-3 (= 1.3.15-2),
 libgraphviz-perl (= 2.26-1),
 libgssapi-krb5-2 (= 1.22.1-3),
 libgts-0.7-5t64 (= 0.7.6+darcs121130-5.2+b2),
 libgudev-1.0-0 (= 238-7+b2),
 libgvc7 (= 14.1.2-1+b2),
 libgvplugin-gd8 (= 14.1.2-1+b2),
 libgvplugin-neato-layout8 (= 14.1.2-1+b2),
 libgvplugin-pango8 (= 14.1.2-1+b2),
 libgvpr2 (= 14.1.2-1+b2),
 libharfbuzz0b (= 12.3.2-2+b2),
 libheap-perl (= 0.80-5),
 libheif-plugin-dav1d (= 1.21.2-4),
 libheif-plugin-libde265 (= 1.21.2-4),
 libheif1 (= 1.21.2-4),
 libhtml-parser-perl (= 3.83-2+b1),
 libhtml-tableextract-perl (= 2.15-2),
 libhtml-tagset-perl (= 3.24-1),
 libhtml-tree-perl (= 5.07-3),
 libhttp-cookies-perl (= 6.11-1),
 libhttp-daemon-perl (= 6.17-1),
 libhttp-date-perl (= 6.06-1),
 libhttp-message-perl (= 7.02-1),
 libhttp-negotiate-perl (= 6.01-2),
 libhwasan0 (= 16.1.0-2),
 libice6 (= 2:1.1.1-1+b2),
 libicu78 (= 78.3-2),
 libimagequant0 (= 4.4.1-1+b2),
 libimport-into-perl (= 1.002005-2),
 libinput-bin (= 1.31.3-1),
 libinput10 (= 1.31.3-1),
 libio-html-perl (= 1.004-3),
 libio-pty-perl (= 1:1.31-1+b1),
 libio-sessiondata-perl (= 1.03-3),
 libio-socket-ssl-perl (= 2.098-1),
 libio-string-perl (= 1.08-4),
 libio-stringy-perl (= 2.113-2),
 libipc-run-perl (= 20260402.0-1),
 libipc-sharelite-perl (= 0.17-5+b4),
 libisl23 (= 0.27-2),
 libitm1 (= 16.1.0-2),
 libjansson4 (= 2.15.0-1),
 libjbig0 (= 2.1-6.1+b3),
 libjcode-pm-perl (= 2.07-1),
 libjpeg62-turbo (= 1:3.1.3-4),
 libk5crypto3 (= 1.22.1-3),
 libkeyutils1 (= 1.6.3-6+b2),
 libkrb5-3 (= 1.22.1-3),
 libkrb5support0 (= 1.22.1-3),
 libldap2 (= 2.6.10+dfsg-1+b3),
 liblerc4 (= 4.1.0+ds-1),
 liblist-moreutils-perl (= 0.430-2),
 liblist-moreutils-xs-perl (= 0.430-4+b3),
 libllvm21 (= 1:21.1.8-7+b3),
 liblsan0 (= 16.1.0-2),
 libltdl7 (= 2.5.4-11),
 liblwp-mediatypes-perl (= 6.04-2),
 liblwp-protocol-https-perl (= 6.15-1),
 liblzma5 (= 5.8.3-1),
 libmagic-mgc (= 1:5.47-4),
 libmagic1t64 (= 1:5.47-4),
 libmailtools-perl (= 2.22-1),
 libmariadb3 (= 1:11.8.8-1),
 libmath-derivative-perl (= 1.01-3),
 libmath-spline-perl (= 0.02-4),
 libmd0 (= 1.2.0-2),
 libmd4c0 (= 0.5.3-1),
 libmime-tools-perl (= 5.517-1),
 libmodule-build-perl (= 0.423400-3),
 libmodule-runtime-perl (= 0.018-1),
 libmoo-perl (= 2.005005-1),
 libmount1 (= 2.42.2-1),
 libmpc3 (= 1.3.1-3),
 libmpfr6 (= 4.2.2-3),
 libmtdev1t64 (= 1.1.7-1+b2),
 libncursesw6 (= 6.6+20251231-1+b1),
 libnet-http-perl (= 6.24-1),
 libnet-smtp-ssl-perl (= 1.04-2),
 libnet-ssleay-perl (= 1.96-1+b1),
 libole-storage-lite-perl (= 0.24-1),
 libopengl0 (= 1.7.0-3+b1),
 libpadwalker-perl (= 2.5-1+b7),
 libpam-modules (= 1.7.0-6),
 libpam-modules-bin (= 1.7.0-6),
 libpam-runtime (= 1.7.0-6),
 libpam0g (= 1.7.0-6),
 libpango-1.0-0 (= 1.57.1-2),
 libpangocairo-1.0-0 (= 1.57.1-2),
 libpangoft2-1.0-0 (= 1.57.1-2),
 libparams-classify-perl (= 0.015-2+b6),
 libparse-recdescent-perl (= 1.967015+dfsg-4),
 libpath-class-perl (= 0.37-4),
 libpathplan4 (= 14.1.2-1+b2),
 libpciaccess0 (= 0.17-3+b4),
 libpcre2-16-0 (= 10.46-1+b2),
 libpcre2-8-0 (= 10.46-1+b2),
 libperl5.42 (= 5.42.2-2),
 libperlio-eol-perl (= 0.19-1+b4),
 libpipeline1 (= 1.5.8-3),
 libpixman-1-0 (= 0.46.4-1+b2),
 libpng16-16t64 (= 1.6.58-1),
 libpostscript-perl (= 0.06-3.1),
 libpq5 (= 18.4-1+b1),
 libproc2-0 (= 2:4.0.4-9+b2),
 libqt6core6t64 (= 6.10.2+dfsg-15),
 libqt6dbus6 (= 6.10.2+dfsg-15),
 libqt6gui6 (= 6.10.2+dfsg-15),
 libqt6widgets6 (= 6.10.2+dfsg-15),
 libquadmath0 (= 16.1.0-2),
 librav1e0.8 (= 0.8.1-10),
 librole-tiny-perl (= 2.002005-1),
 libsasl2-2 (= 2.1.28+dfsg1-11),
 libsasl2-modules-db (= 2.1.28+dfsg1-11),
 libseccomp2 (= 2.6.0-2+b1),
 libselinux1 (= 3.10-1),
 libsensors-config (= 1:3.6.2-2),
 libsensors5 (= 1:3.6.2-2+b2),
 libset-object-perl (= 1.43-1+b1),
 libset-scalar-perl (= 1.29-3),
 libsframe3 (= 2.46.50.20260617-1),
 libsharpyuv0 (= 1.5.0-0.1+b2),
 libsm6 (= 2:1.2.6-1+b2),
 libsmartcols1 (= 2.42.2-1),
 libsoap-lite-perl (= 1.27-3),
 libsort-naturally-perl (= 1.03-4),
 libspreadsheet-parseexcel-perl (= 0.6600-1),
 libspreadsheet-writeexcel-perl (= 2.40-4),
 libsqlite3-0 (= 3.53.2-1),
 libssl3t64 (= 3.6.3-1),
 libstatistics-descriptive-perl (= 3.0801-1),
 libstdc++-15-dev (= 15.3.0-1),
 libstdc++6 (= 16.1.0-2),
 libsub-quote-perl (= 2.006009-1),
 libsub-uplevel-perl (= 0.2800-3),
 libsvg-graph-perl (= 0.02-4),
 libsvg-perl (= 2.89-1),
 libsvtav1enc4 (= 4.1.0+dfsg-1),
 libsystemd0 (= 261-1),
 libtask-weaken-perl (= 1.06-2),
 libtest-deep-perl (= 1.205-1),
 libtest-differences-perl (= 0.72-1),
 libtest-exception-perl (= 0.43-3),
 libtest-memory-cycle-perl (= 1.06-2),
 libtest-most-perl (= 0.42-1),
 libtest-pod-perl (= 1.52-3),
 libtest-requiresinternet-perl (= 0.05-4),
 libtest-warn-perl (= 0.37-2),
 libtest-weaken-perl (= 3.022000-2),
 libtext-charwidth-perl (= 0.04-12+b1),
 libtext-diff-perl (= 1.45-2),
 libtext-wrapi18n-perl (= 0.06-11),
 libthai-data (= 0.1.30-1),
 libthai0 (= 0.1.30-1+b1),
 libtiff6 (= 4.7.1-3),
 libtimedate-perl (= 2.3500-1),
 libtinfo6 (= 6.6+20251231-1+b1),
 libtool (= 2.5.4-11),
 libtree-dagnode-perl (= 1.35-1),
 libtry-tiny-perl (= 0.32-1),
 libts0t64 (= 1.22-1.1+b2),
 libtsan2 (= 16.1.0-2),
 libtype-tiny-perl (= 2.010001-1),
 libubsan1 (= 16.1.0-2),
 libuchardet0 (= 0.0.8-2+b2),
 libudev1 (= 261-1),
 libunicode-map-perl (= 0.112-13+b6),
 libunistring5 (= 1.4.2-1),
 liburi-perl (= 5.35-1),
 libuuid1 (= 2.42.2-1),
 libvulkan1 (= 1.4.341.0-1),
 libwacom-common (= 2.18.0-1),
 libwacom9 (= 2.18.0-1),
 libwayland-client0 (= 1.25.0-2),
 libwebp7 (= 1.5.0-0.1+b2),
 libwww-perl (= 6.83-1),
 libwww-robotrules-perl (= 6.03-1),
 libx11-6 (= 2:1.8.13-1),
 libx11-data (= 2:1.8.13-1),
 libx11-xcb1 (= 2:1.8.13-1),
 libxau6 (= 1:1.0.11-1+b2),
 libxcb-cursor0 (= 0.1.6-1),
 libxcb-dri3-0 (= 1.17.0-2+b2),
 libxcb-glx0 (= 1.17.0-2+b2),
 libxcb-icccm4 (= 0.4.2-1+b2),
 libxcb-image0 (= 0.4.0-2+b3),
 libxcb-keysyms1 (= 0.4.1-1+b2),
 libxcb-present0 (= 1.17.0-2+b2),
 libxcb-randr0 (= 1.17.0-2+b2),
 libxcb-render-util0 (= 0.3.10-1+b2),
 libxcb-render0 (= 1.17.0-2+b2),
 libxcb-shape0 (= 1.17.0-2+b2),
 libxcb-shm0 (= 1.17.0-2+b2),
 libxcb-sync1 (= 1.17.0-2+b2),
 libxcb-util1 (= 0.4.1-1+b2),
 libxcb-xfixes0 (= 1.17.0-2+b2),
 libxcb-xinput0 (= 1.17.0-2+b2),
 libxcb-xkb1 (= 1.17.0-2+b2),
 libxcb1 (= 1.17.0-2+b2),
 libxdmcp6 (= 1:1.1.5-2+b1),
 libxdot4 (= 14.1.2-1+b2),
 libxext6 (= 2:1.3.4-1+b4),
 libxkbcommon-x11-0 (= 1.13.1-1),
 libxkbcommon0 (= 1.13.1-1),
 libxml-dom-perl (= 1.46-2),
 libxml-dom-xpath-perl (= 0.14-4),
 libxml-filter-buffertext-perl (= 1.01-7),
 libxml-libxml-perl (= 2.0207+dfsg+really+2.0134-8+b1),
 libxml-namespacesupport-perl (= 1.12-2),
 libxml-parser-perl (= 2.47-2+b1),
 libxml-perl (= 0.08-4),
 libxml-regexp-perl (= 0.04-2),
 libxml-sax-base-perl (= 1.09-3),
 libxml-sax-expatxs-perl (= 1.33-3+b5),
 libxml-sax-perl (= 1.02+dfsg-5),
 libxml-sax-writer-perl (= 0.57-3),
 libxml-simple-perl (= 2.25-2),
 libxml-twig-perl (= 1:3.54-1),
 libxml-writer-perl (= 0.900-2),
 libxml-xpath-perl (= 1.49-1),
 libxml-xpathengine-perl (= 0.14-2),
 libxml2-16 (= 2.15.3+dfsg-1),
 libxpm4 (= 1:3.5.19-1),
 libxrender1 (= 1:0.9.12-1+b2),
 libxshmfence1 (= 1.3.3-1+b2),
 libxxf86vm1 (= 1:1.1.4-2+b1),
 libyaml-perl (= 1.31-1),
 libyuv0 (= 0.0.1922.20260106-1+b1),
 libz3-4 (= 4.13.3-1.1),
 libzstd1 (= 1.5.7+dfsg-3+b2),
 linux-libc-dev (= 7.0.13-1),
 m4 (= 1.4.21-1),
 make (= 4.4.1-3),
 man-db (= 2.13.1-1),
 mariadb-common (= 1:11.8.8-1),
 mawk (= 1.3.4.20260302-1),
 mesa-libgallium (= 26.1.2-1),
 mysql-common (= 5.8+1.1.1),
 ncurses-base (= 6.6+20251231-1),
 ncurses-bin (= 6.6+20251231-1+b1),
 netbase (= 6.5),
 openssl (= 3.6.3-1),
 openssl-provider-legacy (= 3.6.3-1),
 patch (= 2.8-2),
 perl (= 5.42.2-2),
 perl-base (= 5.42.2-2),
 perl-modules-5.42 (= 5.42.2-2),
 perl-openssl-defaults (= 7+b2),
 po-debconf (= 1.0.22),
 procps (= 2:4.0.4-9+b2),
 rename (= 2.02-2),
 rpcsvc-proto (= 1.4.4-1),
 sed (= 4.9-3),
 sensible-utils (= 0.0.26),
 shared-mime-info (= 2.4-5+b3),
 sysvinit-utils (= 3.18-1),
 tar (= 1.35+dfsg-4),
 ucf (= 3.0053),
 util-linux (= 2.42.2-1),
 x11-common (= 1:7.7+26),
 xkb-data (= 2.47-1),
 xz-utils (= 5.8.3-1),
 zlib1g (= 1:1.3.dfsg+really1.3.2-3)
Environment:
 DEB_BUILD_OPTIONS="parallel=2"
 LANG="C.UTF-8"
 LANGUAGE="en_GB:en"
 LC_COLLATE="C.UTF-8"
 LC_CTYPE="C.UTF-8"
 LD_LIBRARY_PATH="/usr/lib/libeatmydata"
 LD_PRELOAD="libeatmydata.so"
 SOURCE_DATE_EPOCH="1782074942"