sbuild (Debian sbuild) 0.91.5 (17 December 2025) on carme.larted.org.uk +==============================================================================+ | bio-rainbow 2.0.4+dfsg-2 (amd64) Sun, 26 Apr 2026 10:03:35 +0000 | +==============================================================================+ Package: bio-rainbow Version: 2.0.4+dfsg-2 Source Version: 2.0.4+dfsg-2 Distribution: perl-5.42-throwaway Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: full I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... +------------------------------------------------------------------------------+ | Chroot Setup Commands Sun, 26 Apr 2026 10:03:36 +0000 | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup bio-rainbow_2.0.4+dfsg-2 perl-5.42-throwaway amd64 ------------------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup bio-rainbow_2.0.4+dfsg-2 perl-5.42-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- I: Setting up apt archive... +------------------------------------------------------------------------------+ | Update chroot Sun, 26 Apr 2026 10:03:37 +0000 | +------------------------------------------------------------------------------+ Get:1 file:/srv/reprepro perl-5.42 InRelease [3042 B] Get:2 http://deb.debian.org/debian unstable InRelease [187 kB] Get:1 file:/srv/reprepro perl-5.42 InRelease [3042 B] Get:3 http://deb.debian.org/debian sid InRelease [187 kB] Get:4 file:/srv/reprepro perl-5.42/main amd64 Packages [625 kB] Get:5 http://deb.debian.org/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:6 http://deb.debian.org/debian unstable/main amd64 Packages T-2026-04-26-0803.51-F-2026-04-26-0803.51.pdiff [5707 B] Get:7 http://deb.debian.org/debian sid/main Sources.diff/Index [63.6 kB] Get:6 http://deb.debian.org/debian unstable/main amd64 Packages T-2026-04-26-0803.51-F-2026-04-26-0803.51.pdiff [5707 B] Get:8 http://deb.debian.org/debian sid/main Sources T-2026-04-26-0803.51-F-2026-04-26-0803.51.pdiff [7269 B] Get:8 http://deb.debian.org/debian sid/main Sources T-2026-04-26-0803.51-F-2026-04-26-0803.51.pdiff [7269 B] Fetched 514 kB in 3s (156 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files Sun, 26 Apr 2026 10:03:43 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/debomatic/incoming/bio-rainbow_2.0.4+dfsg-2.dsc exists in /srv/debomatic/incoming; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Sun, 26 Apr 2026 10:03:43 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), help2man, build-essential Filtered Build-Depends: debhelper-compat (= 13), help2man, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/bio-rainbow-YNrQy0/resolver-uYrf0P/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/build/bio-rainbow-YNrQy0/resolver-uYrf0P/apt_archive ./ InRelease Get:2 copy:/build/bio-rainbow-YNrQy0/resolver-uYrf0P/apt_archive ./ Release [609 B] Ign:3 copy:/build/bio-rainbow-YNrQy0/resolver-uYrf0P/apt_archive ./ Release.gpg Get:4 copy:/build/bio-rainbow-YNrQy0/resolver-uYrf0P/apt_archive ./ Sources [610 B] Get:5 copy:/build/bio-rainbow-YNrQy0/resolver-uYrf0P/apt_archive ./ Packages [649 B] Fetched 1868 B in 0s (121 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libdebhelper-perl libelf1t64 libfile-stripnondeterminism-perl liblocale-gettext-perl libmagic-mgc libmagic1t64 libpipeline1 libtool libuchardet0 libxml2-16 m4 man-db po-debconf sensible-utils Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev gnulib-l10n groff libtool-doc gfortran | fortran95-compiler m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libdebhelper-perl libelf1t64 libfile-stripnondeterminism-perl liblocale-gettext-perl libmagic-mgc libmagic1t64 libpipeline1 libtool libuchardet0 libxml2-16 m4 man-db po-debconf sbuild-build-depends-main-dummy sensible-utils 0 upgraded, 31 newly installed, 0 to remove and 0 not upgraded. Need to get 10.9 MB/11.0 MB of archives. After this operation, 40.6 MB of additional disk space will be used. Get:1 file:/srv/reprepro perl-5.42/main amd64 liblocale-gettext-perl amd64 1.07-8+b1 [15.2 kB] Get:2 copy:/build/bio-rainbow-YNrQy0/resolver-uYrf0P/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [860 B] Get:3 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get:4 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-5+b2 [337 kB] Get:5 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-5+b2 [109 kB] Get:6 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.46-5+b2 [42.6 kB] Get:7 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.2-2 [242 kB] Get:8 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-2+b1 [68.8 kB] Get:9 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.24.1-1 [1336 kB] Get:10 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.42-4 [99.6 kB] Get:11 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-3 [49.2 kB] Get:12 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get:13 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.21-1 [332 kB] Get:14 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-6 [494 kB] Get:15 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20240727.1+nmu1 [60.0 kB] Get:16 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.18.1-4 [877 kB] Get:17 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.2-2 [770 kB] Get:18 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.31 [75.7 kB] Get:19 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-11 [539 kB] Get:20 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 22 [12.2 kB] Get:21 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:22 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get:23 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get:24 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.195-1 [58.1 kB] Get:25 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.16-4 [108 kB] Get:26 http://deb.debian.org/debian unstable/main amd64 libxml2-16 amd64 2.15.2+dfsg-0.1 [641 kB] Get:27 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.2-2 [1684 kB] Get:28 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:29 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.22 [216 kB] Get:30 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.31 [932 kB] Get:31 http://deb.debian.org/debian unstable/main amd64 help2man amd64 1.49.3 [198 kB] Preconfiguring packages ... Fetched 10.9 MB in 0s (75.9 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 23450 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-8+b1_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-8+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.46-5+b2_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5+b2) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../03-libmagic1t64_1%3a5.46-5+b2_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-5+b2) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.46-5+b2_amd64.deb ... Unpacking file (1:5.46-5+b2) ... Selecting previously unselected package gettext-base. 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Preparing to unpack .../30-sbuild-build-depends-main-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.8-3) ... Setting up bsdextrautils (2.42-4) ... Setting up libmagic-mgc (1:5.46-5+b2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:amd64 (2.15.2+dfsg-0.1) ... Setting up libdebhelper-perl (13.31) ... Setting up libmagic1t64:amd64 (1:5.46-5+b2) ... Setting up gettext-base (0.23.2-2) ... Setting up m4 (1.4.21-1) ... Setting up file (1:5.46-5+b2) ... Setting up libelf1t64:amd64 (0.195-1) ... Setting up autotools-dev (20240727.1+nmu1) ... Setting up autopoint (0.23.2-2) ... Setting up autoconf (2.72-6) ... Setting up dwz (0.16-4) ... Setting up sensible-utils (0.0.26) ... Setting up libuchardet0:amd64 (0.0.8-2+b1) ... Setting up liblocale-gettext-perl (1.07-8+b1) ... Setting up automake (1:1.18.1-4) ... update-alternatives: using /usr/bin/automake-1.18 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up gettext (0.23.2-2) ... Setting up libtool (2.5.4-11) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (22) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.24.1-1) ... Setting up po-debconf (1.0.22) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.31) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.42-15) ... +------------------------------------------------------------------------------+ | Check architectures Sun, 26 Apr 2026 10:03:51 +0000 | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any) +------------------------------------------------------------------------------+ | Build environment Sun, 26 Apr 2026 10:03:51 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.18.5+deb14-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.18.5-1 (2026-01-16) amd64 (x86_64) Toolchain package versions: binutils_2.46-3 dpkg-dev_1.23.7 g++-14_14.3.0-14 g++-15_15.2.0-17 gcc-14_14.3.0-14 gcc-15_15.2.0-17 libc6-dev_2.42-15 libstdc++-14-dev_14.3.0-14 libstdc++-15-dev_15.2.0-17 libstdc++6_16-20260425-1 linux-libc-dev_6.19.14-1 Package versions: adduser_3.155 apt_3.2.0 autoconf_2.72-6 automake_1:1.18.1-4 autopoint_0.23.2-2 autotools-dev_20240727.1+nmu1 base-files_14 base-passwd_3.6.8 bash_5.3-2 binutils_2.46-3 binutils-common_2.46-3 binutils-gold_2.44-3 binutils-gold-x86-64-linux-gnu_2.44-3 binutils-x86-64-linux-gnu_2.46-3 bsdextrautils_2.42-4 bsdutils_1:2.42-4 build-essential_12.12 bzip2_1.0.8-6+b2 coreutils_9.10-1 cpp_4:15.2.0-5 cpp-14_14.3.0-14 cpp-14-x86-64-linux-gnu_14.3.0-14 cpp-15_15.2.0-17 cpp-15-x86-64-linux-gnu_15.2.0-17 cpp-x86-64-linux-gnu_4:15.2.0-5 dash_0.5.12-12 debconf_1.5.92 debhelper_13.31 debian-archive-keyring_2025.1 debianutils_5.23.2 dh-autoreconf_22 dh-strip-nondeterminism_1.15.0-1 diffutils_1:3.12-1 dirmngr_2.4.9-4 dpkg_1.23.7 dpkg-dev_1.23.7 dwz_0.16-4 eatmydata_131-2 file_1:5.46-5+b2 findutils_4.10.0-3 g++_4:15.2.0-5 g++-14_14.3.0-14 g++-14-x86-64-linux-gnu_14.3.0-14 g++-15_15.2.0-17 g++-15-x86-64-linux-gnu_15.2.0-17 g++-x86-64-linux-gnu_4:15.2.0-5 gcc_4:15.2.0-5 gcc-14_14.3.0-14 gcc-14-base_14.3.0-14 gcc-14-x86-64-linux-gnu_14.3.0-14 gcc-15_15.2.0-17 gcc-15-base_15.2.0-17 gcc-15-x86-64-linux-gnu_15.2.0-17 gcc-16-base_16-20260425-1 gcc-x86-64-linux-gnu_4:15.2.0-5 gettext_0.23.2-2 gettext-base_0.23.2-2 gnupg_2.4.9-4 gnupg-l10n_2.4.9-4 gpg_2.4.9-4 gpg-agent_2.4.9-4 gpgconf_2.4.9-4 gpgsm_2.4.9-4 grep_3.12-1 groff-base_1.24.1-1 gzip_1.13-1 help2man_1.49.3 hostname_3.25 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-3 libapt-pkg7.0_3.2.0 libarchive-zip-perl_1.68-1 libasan8_16-20260425-1 libassuan9_3.0.2-2+b1 libatomic1_16-20260425-1 libattr1_1:2.5.2-4 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1+b1 libbinutils_2.46-3 libblkid1_2.42-4 libbsd0_0.12.2-2+b1 libbz2-1.0_1.0.8-6+b2 libc-bin_2.42-15 libc-dev-bin_2.42-15 libc-gconv-modules-extra_2.42-15 libc-l10n_2.42-15 libc6_2.42-15 libc6-dev_2.42-15 libcap-ng0_0.9.3-1 libcap2_1:2.78-1 libcc1-0_16-20260425-1 libcrypt-dev_1:4.5.1-1+b1 libcrypt1_1:4.5.1-1+b1 libctf-nobfd0_2.46-3 libctf0_2.46-3 libdb5.3t64_5.3.28+dfsg2-11+b1 libdebconfclient0_0.282+b3 libdebhelper-perl_13.31 libdpkg-perl_1.23.7 libeatmydata1_131-2+b2 libelf1t64_0.195-1 libffi8_3.5.2-4 libfile-stripnondeterminism-perl_1.15.0-1 libgcc-14-dev_14.3.0-14 libgcc-15-dev_15.2.0-17 libgcc-s1_16-20260425-1 libgcrypt20_1.12.2-1 libgdbm-compat4t64_1.26-1+b1 libgdbm6t64_1.26-1+b1 libgmp10_2:6.3.0+dfsg-5+b1 libgnutls30t64_3.8.12-3 libgomp1_16-20260425-1 libgpg-error0_1.59-4 libgprofng0_2.46-3 libhogweed6t64_3.10.2-1+b1 libhwasan0_16-20260425-1 libidn2-0_2.3.8-4+b1 libisl23_0.27-2 libitm1_16-20260425-1 libjansson4_2.14-2+b4 libksba8_1.6.8-2 liblastlog2-2_2.42-4 libldap2_2.6.10+dfsg-1+b2 liblocale-gettext-perl_1.07-8+b1 liblsan0_16-20260425-1 liblz4-1_1.10.0-10 liblzma5_5.8.3-1 libmagic-mgc_1:5.46-5+b2 libmagic1t64_1:5.46-5+b2 libmd0_1.1.0-2+b2 libmount1_2.42-4 libmpc3_1.3.1-3 libmpfr6_4.2.2-3 libncursesw6_6.6+20251231-1 libnettle8t64_3.10.2-1+b1 libnpth0t64_1.8-3+b1 libp11-kit0_0.26.2-2 libpam-modules_1.7.0-5+b1 libpam-modules-bin_1.7.0-5+b1 libpam-runtime_1.7.0-5 libpam0g_1.7.0-5+b1 libpcre2-8-0_10.46-1+b1 libperl5.40_5.40.1-7+b2 libperl5.42_5.42.2-1 libpipeline1_1.5.8-3 libquadmath0_16-20260425-1 libreadline8t64_8.3-4 libsasl2-2_2.1.28+dfsg1-11 libsasl2-modules-db_2.1.28+dfsg1-11 libseccomp2_2.6.0-2+b1 libselinux1_3.10-1 libsemanage-common_3.10-1 libsemanage2_3.10-1 libsepol2_3.10-1 libsframe2_2.45.50.20251209-1+b1 libsframe3_2.46-3 libsmartcols1_2.42-4 libsqlite3-0_3.46.1-9+b1 libssl3t64_3.6.2-1 libstdc++-14-dev_14.3.0-14 libstdc++-15-dev_15.2.0-17 libstdc++6_16-20260425-1 libsystemd0_260.1-1 libtasn1-6_4.21.0-2 libtinfo6_6.6+20251231-1 libtool_2.5.4-11 libtsan2_16-20260425-1 libubsan1_16-20260425-1 libuchardet0_0.0.8-2+b1 libudev1_260.1-1 libunistring5_1.4.2-1 libuuid1_2.42-4 libxml2-16_2.15.2+dfsg-0.1 libxxhash0_0.8.3-2+b1 libzstd1_1.5.7+dfsg-3+b1 linux-libc-dev_6.19.14-1 locales-all_2.42-15 login.defs_1:4.19.3-2 m4_1.4.21-1 make_4.4.1-3 man-db_2.13.1-1 mawk_1.3.4.20260302-1 ncurses-base_6.6+20251231-1 ncurses-bin_6.6+20251231-1 openssl-provider-legacy_3.6.2-1 passwd_1:4.19.3-2 patch_2.8-2 perl_5.42.2-1 perl-base_5.42.2-1 perl-modules-5.40_5.40.1-7 perl-modules-5.42_5.42.2-1 pinentry-curses_1.3.2-4 po-debconf_1.0.22 readline-common_8.3-4 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-3 sensible-utils_0.0.26 sqv_1.3.0-5+b1 sysvinit-utils_3.18-1 tar_1.35+dfsg-4 util-linux_2.42-4 xz-utils_5.8.3-1 zlib1g_1:1.3.dfsg+really1.3.2-3 +------------------------------------------------------------------------------+ | Build Sun, 26 Apr 2026 10:03:51 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: bio-rainbow Binary: bio-rainbow Architecture: any Version: 2.0.4+dfsg-2 Maintainer: Debian Med Packaging Team Uploaders: Olivier Sallou , Pranav Ballaney Homepage: http://sourceforge.net/projects/bio-rainbow/ Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/bio-rainbow Vcs-Git: https://salsa.debian.org/med-team/bio-rainbow.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), help2man Package-List: bio-rainbow deb science optional arch=any Checksums-Sha1: 69aa7e1ad4254ee1f2aa3f4d62bb49be724654aa 58808 bio-rainbow_2.0.4+dfsg.orig.tar.xz 0167f4b007285a9c2f54f313a7a1c475aaebc0d5 14012 bio-rainbow_2.0.4+dfsg-2.debian.tar.xz Checksums-Sha256: a4e77785f8b5419d8d40aaa0b3b3fe48d3892793dec60049ca5074e43fe46b5e 58808 bio-rainbow_2.0.4+dfsg.orig.tar.xz 2ff6db13165339d6b52e13eea6ab32700a48c662d9409062a18cebe156836a36 14012 bio-rainbow_2.0.4+dfsg-2.debian.tar.xz Files: 9dcb2fb4e52a73ffe32c61f97921c8e0 58808 bio-rainbow_2.0.4+dfsg.orig.tar.xz cb7bb50a5910620b126226506cc13922 14012 bio-rainbow_2.0.4+dfsg-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl9CvWsRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtG0WRAAjkL/JGdzH8Lv124xrTFM+K7v1nXRx+4S kjbW3pVRURp6XgXFRiJ47x1nknjpS6h7AO2MLQ1zLJ27CyIFdRsZSliH8T3afxIE wn17QfCIwmbYP8S/LMo0viD5xuB5C2LVj9Zncn1M05qacdecUgayX62YVOavQcyz V7CYc5ohABV7Fdq+0GKttEIOy/WSstj3vquHogjA7x0CI+THxPcpUhkmndx7aMFV gEJUm981/Y92LUkqGNHGZp9NGyq9EVHuOQYVZ/1pQI5R5iLJvBXDOYugM0NTRW+d asxNiLY3W0kpYQTkLcrk1kjJFA4EjUzT1Wq1ZZvXso+agEh8V+32ZuJmAIA6D163 YCYpwlk8/dpoOlnWqBv8tue9nm431troD1rHjyVg/1QdlQjvmmrpNPd8NdH7aFw8 X7P4ShZwU0EhAW0ysJi96R49ZpN6AnLNgP4O99EYj2eDe7im9OyOaF/EwXAWCwOf CO9g4d8Cms3WsCmSQySavDjqjgPBF/9yFwuya4PBmbjtOac5p/6wpHMlVUO2c/Uc RpRGvm8awZu7S0d4izN9ouHSOLdfekKZjxscHrLFNCgWK0EdnRuyPJGiCcDtFkgM ZadBsADFHUyO9+AzhE49D5Z3sDU3/nn+m3JEcwE38oLDHUQglaPsZtJybg38hHYz eyvo4OggmpE= =e4K2 -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./bio-rainbow_2.0.4+dfsg-2.dsc: missing OpenPGP keyrings dpkg-source: info: verifying ./bio-rainbow_2.0.4+dfsg-2.dsc dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-keyring.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-tag2upload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-nonupload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting bio-rainbow in /build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg dpkg-source: info: unpacking bio-rainbow_2.0.4+dfsg.orig.tar.xz tar: Ignoring unknown extended header keyword 'LIBARCHIVE.creationtime' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' dpkg-source: info: unpacking bio-rainbow_2.0.4+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying add_hardening.patch dpkg-source: info: applying rename_binary.patch dpkg-source: info: applying spelling.patch clean up apt cache ------------------ Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Timed Build Commands Sun, 26 Apr 2026 10:03:53 +0000 | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/starting-build-commands/no-network bio-rainbow_2.0.4+dfsg-2 perl-5.42-throwaway amd64 ------------------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/starting-build-commands/no-network bio-rainbow_2.0.4+dfsg-2 perl-5.42-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANGUAGE=en_GB:en LC_ALL=C.UTF-8 LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so LOGNAME=debomatic PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg SCHROOT_ALIAS_NAME=perl-5.42-throwaway-amd64-debomatic SCHROOT_CHROOT_NAME=perl-5.42-amd64-debomatic SCHROOT_COMMAND=env SCHROOT_GID=110 SCHROOT_GROUP=sbuild SCHROOT_SESSION_ID=perl-5.42-amd64-debomatic-7540da22-6529-4eac-a3f0-4bc448170a6b SCHROOT_UID=1002 SCHROOT_USER=debomatic SHELL=/bin/sh USER=debomatic dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -Zxz dpkg-buildpackage: info: source package bio-rainbow dpkg-buildpackage: info: source version 2.0.4+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Pranav Ballaney dpkg-source -Zxz --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_auto_clean make -j2 clean make[1]: Entering directory '/build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg' rm -f *.o *.gcda *.gcno *.gcov gmon.out bio-rainbow rbasm ezmsim rbmergetag *.exe make[1]: Leaving directory '/build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg' dh_clean dpkg-source -Zxz -b . dpkg-source: info: using source format '3.0 (quilt)' dpkg-source: info: building bio-rainbow using existing ../bio-rainbow_2.0.4+dfsg.orig.tar.xz tar: Ignoring unknown extended header keyword 'LIBARCHIVE.creationtime' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' tar: Ignoring unknown extended header keyword 'SCHILY.dev' tar: Ignoring unknown extended header keyword 'SCHILY.ino' tar: Ignoring unknown extended header keyword 'SCHILY.nlink' dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: building bio-rainbow in ../bio-rainbow_2.0.4+dfsg-2.debian.tar.xz dpkg-source: info: building bio-rainbow in ../bio-rainbow_2.0.4+dfsg-2.dsc debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j2 INSTALL="install --strip-program=true" make[1]: Entering directory '/build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg' gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -W -O2 -Wall -Wno-self-assign -Wno-unused-function -D_FILE_OFFSET_BITS=64 main.c -o main.o gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -W -O2 -Wall -Wno-self-assign -Wno-unused-function -D_FILE_OFFSET_BITS=64 divide.c -o divide.o In file included from rainbow.h:30, from main.c:20: dna.h:72:39: warning: initializer-string for array of ‘char’ truncates NUL terminator but destination lacks ‘nonstring’ attribute (7 chars into 6 available) [-Wunterminated-string-initialization] 72 | static const char bit_base_table[6] = "ACGTN-"; | ^~~~~~~~ dna.h:73:41: warning: initializer-string for array of ‘char’ truncates NUL terminator but destination lacks ‘nonstring’ attribute (17 chars into 16 available) [-Wunterminated-string-initialization] 73 | static const char bit4_base_table[16] = "-ACMGRSVTWYHKDBN"; | ^~~~~~~~~~~~~~~~~~ In file included from rainbow.h:30, from divide.c:20: dna.h:72:39: warning: initializer-string for array of ‘char’ truncates NUL terminator but destination lacks ‘nonstring’ attribute (7 chars into 6 available) [-Wunterminated-string-initialization] 72 | static const char bit_base_table[6] = "ACGTN-"; | ^~~~~~~~ dna.h:73:41: warning: initializer-string for array of ‘char’ truncates NUL terminator but destination lacks ‘nonstring’ attribute (17 chars into 16 available) [-Wunterminated-string-initialization] 73 | static const char bit4_base_table[16] = "-ACMGRSVTWYHKDBN"; | ^~~~~~~~~~~~~~~~~~ cc1: note: unrecognized command-line option ‘-Wno-self-assign’ may have been intended to silence earlier diagnostics gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -W -O2 -Wall -Wno-self-assign -Wno-unused-function -D_FILE_OFFSET_BITS=64 file_reader.c -o file_reader.o cc1: note: unrecognized command-line option ‘-Wno-self-assign’ may have been intended to silence earlier diagnostics gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -W -O2 -Wall -Wno-self-assign -Wno-unused-function -D_FILE_OFFSET_BITS=64 asm_R2.c -o asm_R2.o In file included from asm_R2.h:26, from asm_R2.c:20: dna.h:72:39: warning: initializer-string for array of ‘char’ truncates NUL terminator but destination lacks ‘nonstring’ attribute (7 chars into 6 available) [-Wunterminated-string-initialization] 72 | static const char bit_base_table[6] = "ACGTN-"; | ^~~~~~~~ dna.h:73:41: warning: initializer-string for array of ‘char’ truncates NUL terminator but destination lacks ‘nonstring’ attribute (17 chars into 16 available) [-Wunterminated-string-initialization] 73 | static const char bit4_base_table[16] = "-ACMGRSVTWYHKDBN"; | ^~~~~~~~~~~~~~~~~~ gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -W -O2 -Wall -Wno-self-assign -Wno-unused-function -D_FILE_OFFSET_BITS=64 mergectg.c -o mergectg.o In file included from asm_R2.h:26, from mergectg.h:10, from mergectg.c:20: dna.h:72:39: warning: initializer-string for array of ‘char’ truncates NUL terminator but destination lacks ‘nonstring’ attribute (7 chars into 6 available) [-Wunterminated-string-initialization] 72 | static const char bit_base_table[6] = "ACGTN-"; | ^~~~~~~~ dna.h:73:41: warning: initializer-string for array of ‘char’ truncates NUL terminator but destination lacks ‘nonstring’ attribute (17 chars into 16 available) [-Wunterminated-string-initialization] 73 | static const char bit4_base_table[16] = "-ACMGRSVTWYHKDBN"; | ^~~~~~~~~~~~~~~~~~ cc1: note: unrecognized command-line option ‘-Wno-self-assign’ may have been intended to silence earlier diagnostics cc1: note: unrecognized command-line option ‘-Wno-self-assign’ may have been intended to silence earlier diagnostics gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -W -O2 -Wall -Wno-self-assign -Wno-unused-function -D_FILE_OFFSET_BITS=64 cluster.c -o cluster.o gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -W -O2 -Wall -Wno-self-assign -Wno-unused-function -D_FILE_OFFSET_BITS=64 ezmsim.c -o ezmsim.o ezmsim.c: In function ‘LR_main’: ezmsim.c:440:33: warning: this statement may fall through [-Wimplicit-fallthrough=] 440 | case 'z': cut = strdup(optarg); | ^~~~~~~~~~~~~~ ezmsim.c:441:17: note: here 441 | case 'p': pos = atoi(optarg); | ^~~~ ezmsim.c: In function ‘EF_main’: ezmsim.c:707:33: warning: this statement may fall through [-Wimplicit-fallthrough=] 707 | case 'z': cut = strdup(optarg); | ^~~~~~~~~~~~~~ ezmsim.c:708:17: note: here 708 | case 'p': pos = atoi(optarg); | ^~~~ In file included from rainbow.h:30, from cluster.c:20: dna.h:72:39: warning: initializer-string for array of ‘char’ truncates NUL terminator but destination lacks ‘nonstring’ attribute (7 chars into 6 available) [-Wunterminated-string-initialization] 72 | static const char bit_base_table[6] = "ACGTN-"; | ^~~~~~~~ dna.h:73:41: warning: initializer-string for array of ‘char’ truncates NUL terminator but destination lacks ‘nonstring’ attribute (17 chars into 16 available) [-Wunterminated-string-initialization] 73 | static const char bit4_base_table[16] = "-ACMGRSVTWYHKDBN"; | ^~~~~~~~~~~~~~~~~~ At top level: cc1: note: unrecognized command-line option ‘-Wno-self-assign’ may have been intended to silence earlier diagnostics gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -W -O2 -Wall -Wno-self-assign -Wno-unused-function -D_FILE_OFFSET_BITS=64 rbasm_main.c -o rbasm_main.o In file included from asm_R2.h:26, from rbasm_main.c:1: dna.h:72:39: warning: initializer-string for array of ‘char’ truncates NUL terminator but destination lacks ‘nonstring’ attribute (7 chars into 6 available) [-Wunterminated-string-initialization] 72 | static const char bit_base_table[6] = "ACGTN-"; | ^~~~~~~~ dna.h:73:41: warning: initializer-string for array of ‘char’ truncates NUL terminator but destination lacks ‘nonstring’ attribute (17 chars into 16 available) [-Wunterminated-string-initialization] 73 | static const char bit4_base_table[16] = "-ACMGRSVTWYHKDBN"; | ^~~~~~~~~~~~~~~~~~ cc1: note: unrecognized command-line option ‘-Wno-self-assign’ may have been intended to silence earlier diagnostics gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -W -O2 -Wall -Wno-self-assign -Wno-unused-function -o ezmsim ezmsim.o -lm cc1: note: unrecognized command-line option ‘-Wno-self-assign’ may have been intended to silence earlier diagnostics gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -W -O2 -Wall -Wno-self-assign -Wno-unused-function -o bio-rainbow main.o divide.o file_reader.o asm_R2.o mergectg.o cluster.o -lm gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -W -O2 -Wall -Wno-self-assign -Wno-unused-function -o rbasm asm_R2.o rbasm_main.o file_reader.o -lm make[1]: Leaving directory '/build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/bio-rainbow/ dh_install dh_installdocs dh_installchangelogs dh_installexamples debian/rules override_dh_installman make[1]: Entering directory '/build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg' # dh_installman is messing up .sh extension as language extension dh_install debian/mans/*.1 usr/share/man/man1 make[1]: Leaving directory '/build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg' dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'bio-rainbow-dbgsym' in '../bio-rainbow-dbgsym_2.0.4+dfsg-2_amd64.deb'. dpkg-deb: building package 'bio-rainbow' in '../bio-rainbow_2.0.4+dfsg-2_amd64.deb'. dpkg-genbuildinfo -O../bio-rainbow_2.0.4+dfsg-2_amd64.buildinfo dpkg-genchanges -O../bio-rainbow_2.0.4+dfsg-2_amd64.changes dpkg-genchanges: info: not including original source code in upload dpkg-source -Zxz --after-build . dpkg-buildpackage: info: binary and diff upload (original source NOT included) -------------------------------------------------------------------------------- Build finished at 2026-04-26T10:04:12Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Sun, 26 Apr 2026 10:04:12 +0000 | +------------------------------------------------------------------------------+ bio-rainbow_2.0.4+dfsg-2_amd64.changes: --------------------------------------- Format: 1.8 Date: Sun, 23 Aug 2020 05:32:47 +0530 Source: bio-rainbow Binary: bio-rainbow bio-rainbow-dbgsym Architecture: source amd64 Version: 2.0.4+dfsg-2 Distribution: perl-5.42-throwaway Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Pranav Ballaney Description: bio-rainbow - clustering and assembling short reads for bioinformatics Changes: bio-rainbow (2.0.4+dfsg-2) unstable; urgency=medium . [ Steffen Möller ] * Updated bio.tools ref * Added ref to conda . [ Pranav Ballaney ] * Install data for autopkgtests * Add autopkgtests * Install docs * Add Pranav Ballaney to Uploaders * Standards-Version: 4.5.0 (routine-update) * debhelper-compat 13 (routine-update) * Remove trailing whitespace in debian/rules (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) Checksums-Sha1: b7031815225c5846773b5778140b4f5f23c25ed1 1186 bio-rainbow_2.0.4+dfsg-2.dsc d3e1d65747b7bacc0f33b6f8339b640d5a44696f 14020 bio-rainbow_2.0.4+dfsg-2.debian.tar.xz 421f5200870b372be32db80692965170fab01792 178600 bio-rainbow-dbgsym_2.0.4+dfsg-2_amd64.deb 2a6d3c0d0bbe92b81d89e1895f962145701e35df 5483 bio-rainbow_2.0.4+dfsg-2_amd64.buildinfo 1dba194ede47bc847949f884db9fa6337bdc8e47 60068 bio-rainbow_2.0.4+dfsg-2_amd64.deb Checksums-Sha256: 04d9e35d886f55cd5d3e2d96518d60d2e2463d79c2335596cc68c52657985306 1186 bio-rainbow_2.0.4+dfsg-2.dsc 0099b9151c1fa68aa01f6116d968055705fca9bd4161ddfba7ebc1596516f6a9 14020 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60068 bio-rainbow_2.0.4+dfsg-2_amd64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sun, 26 Apr 2026 10:04:12 +0000 Build-Path: /build/bio-rainbow-YNrQy0/bio-rainbow-2.0.4+dfsg Build-Tainted-By: usr-local-has-programs Installed-Build-Depends: autoconf (= 2.72-6), automake (= 1:1.18.1-4), autopoint (= 0.23.2-2), autotools-dev (= 20240727.1+nmu1), base-files (= 14), base-passwd (= 3.6.8), bash (= 5.3-2), binutils (= 2.46-3), binutils-common (= 2.46-3), binutils-x86-64-linux-gnu (= 2.46-3), bsdextrautils (= 2.42-4), build-essential (= 12.12), bzip2 (= 1.0.8-6+b2), coreutils (= 9.10-1), cpp (= 4:15.2.0-5), cpp-14 (= 14.3.0-14), cpp-14-x86-64-linux-gnu (= 14.3.0-14), cpp-15 (= 15.2.0-17), cpp-15-x86-64-linux-gnu (= 15.2.0-17), cpp-x86-64-linux-gnu (= 4:15.2.0-5), dash (= 0.5.12-12), debconf (= 1.5.92), debhelper (= 13.31), debianutils (= 5.23.2), dh-autoreconf (= 22), dh-strip-nondeterminism (= 1.15.0-1), diffutils (= 1:3.12-1), dpkg (= 1.23.7), dpkg-dev (= 1.23.7), dwz (= 0.16-4), file (= 1:5.46-5+b2), findutils (= 4.10.0-3), g++ (= 4:15.2.0-5), g++-15 (= 15.2.0-17), g++-15-x86-64-linux-gnu (= 15.2.0-17), g++-x86-64-linux-gnu (= 4:15.2.0-5), gcc (= 4:15.2.0-5), gcc-14 (= 14.3.0-14), gcc-14-base (= 14.3.0-14), gcc-14-x86-64-linux-gnu (= 14.3.0-14), gcc-15 (= 15.2.0-17), gcc-15-base (= 15.2.0-17), gcc-15-x86-64-linux-gnu (= 15.2.0-17), gcc-16-base (= 16-20260425-1), gcc-x86-64-linux-gnu (= 4:15.2.0-5), gettext (= 0.23.2-2), gettext-base (= 0.23.2-2), grep (= 3.12-1), groff-base (= 1.24.1-1), gzip (= 1.13-1), help2man (= 1.49.3), hostname (= 3.25), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-3), libarchive-zip-perl (= 1.68-1), libasan8 (= 16-20260425-1), libatomic1 (= 16-20260425-1), libattr1 (= 1:2.5.2-4), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1+b1), libbinutils (= 2.46-3), libblkid1 (= 2.42-4), libbz2-1.0 (= 1.0.8-6+b2), libc-bin (= 2.42-15), libc-dev-bin (= 2.42-15), libc-gconv-modules-extra (= 2.42-15), libc6 (= 2.42-15), libc6-dev (= 2.42-15), libcap-ng0 (= 0.9.3-1), libcc1-0 (= 16-20260425-1), libcrypt1 (= 1:4.5.1-1+b1), libctf-nobfd0 (= 2.46-3), libctf0 (= 2.46-3), libdb5.3t64 (= 5.3.28+dfsg2-11+b1), libdebconfclient0 (= 0.282+b3), libdebhelper-perl (= 13.31), libdpkg-perl (= 1.23.7), libelf1t64 (= 0.195-1), libfile-stripnondeterminism-perl (= 1.15.0-1), libgcc-14-dev (= 14.3.0-14), libgcc-15-dev (= 15.2.0-17), libgcc-s1 (= 16-20260425-1), libgdbm-compat4t64 (= 1.26-1+b1), libgdbm6t64 (= 1.26-1+b1), libgmp10 (= 2:6.3.0+dfsg-5+b1), libgomp1 (= 16-20260425-1), libgprofng0 (= 2.46-3), libhwasan0 (= 16-20260425-1), libisl23 (= 0.27-2), libitm1 (= 16-20260425-1), libjansson4 (= 2.14-2+b4), liblocale-gettext-perl (= 1.07-8+b1), liblsan0 (= 16-20260425-1), liblzma5 (= 5.8.3-1), libmagic-mgc (= 1:5.46-5+b2), libmagic1t64 (= 1:5.46-5+b2), libmd0 (= 1.1.0-2+b2), libmount1 (= 2.42-4), libmpc3 (= 1.3.1-3), libmpfr6 (= 4.2.2-3), libpam-modules (= 1.7.0-5+b1), libpam-modules-bin (= 1.7.0-5+b1), libpam-runtime (= 1.7.0-5), libpam0g (= 1.7.0-5+b1), libpcre2-8-0 (= 10.46-1+b1), libperl5.42 (= 5.42.2-1), libpipeline1 (= 1.5.8-3), libquadmath0 (= 16-20260425-1), libseccomp2 (= 2.6.0-2+b1), libselinux1 (= 3.10-1), libsframe3 (= 2.46-3), libsmartcols1 (= 2.42-4), libssl3t64 (= 3.6.2-1), libstdc++-15-dev (= 15.2.0-17), libstdc++6 (= 16-20260425-1), libsystemd0 (= 260.1-1), libtinfo6 (= 6.6+20251231-1), libtool (= 2.5.4-11), libtsan2 (= 16-20260425-1), libubsan1 (= 16-20260425-1), libuchardet0 (= 0.0.8-2+b1), libudev1 (= 260.1-1), libunistring5 (= 1.4.2-1), libuuid1 (= 2.42-4), libxml2-16 (= 2.15.2+dfsg-0.1), libzstd1 (= 1.5.7+dfsg-3+b1), linux-libc-dev (= 6.19.14-1), m4 (= 1.4.21-1), make (= 4.4.1-3), man-db (= 2.13.1-1), mawk (= 1.3.4.20260302-1), ncurses-base (= 6.6+20251231-1), ncurses-bin (= 6.6+20251231-1), openssl-provider-legacy (= 3.6.2-1), patch (= 2.8-2), perl (= 5.42.2-1), perl-base (= 5.42.2-1), perl-modules-5.42 (= 5.42.2-1), po-debconf (= 1.0.22), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-3), sensible-utils (= 0.0.26), sysvinit-utils (= 3.18-1), tar (= 1.35+dfsg-4), util-linux (= 2.42-4), xz-utils (= 5.8.3-1), zlib1g (= 1:1.3.dfsg+really1.3.2-3) Environment: DEB_BUILD_OPTIONS="parallel=2" LANG="C.UTF-8" LANGUAGE="en_GB:en" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" LD_LIBRARY_PATH="/usr/lib/libeatmydata" LD_PRELOAD="libeatmydata.so" SOURCE_DATE_EPOCH="1598140967" +------------------------------------------------------------------------------+ | Package contents Sun, 26 Apr 2026 10:04:13 +0000 | +------------------------------------------------------------------------------+ bio-rainbow-dbgsym_2.0.4+dfsg-2_amd64.deb ----------------------------------------- new Debian package, version 2.0. size 178600 bytes: control archive=700 bytes. 478 bytes, 12 lines control 406 bytes, 4 lines md5sums Package: bio-rainbow-dbgsym Source: bio-rainbow Version: 2.0.4+dfsg-2 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 241 Depends: bio-rainbow (= 2.0.4+dfsg-2) Section: debug Priority: optional Description: debug symbols for bio-rainbow Build-Ids: 8a85fe3693ed5a1c874dd7c865cc4c81ec319c17 96c3b4c90423f546396dbba462500a7906f0e902 e0e1e29237cbd63e4b7c54e5f761fc3c7ddee4af drwxr-xr-x root/root 0 2020-08-23 00:02 ./ drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/ drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/lib/ drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/lib/debug/.build-id/8a/ -rw-r--r-- root/root 57800 2020-08-23 00:02 ./usr/lib/debug/.build-id/8a/85fe3693ed5a1c874dd7c865cc4c81ec319c17.debug drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/lib/debug/.build-id/96/ -rw-r--r-- root/root 33232 2020-08-23 00:02 ./usr/lib/debug/.build-id/96/c3b4c90423f546396dbba462500a7906f0e902.debug drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/lib/debug/.build-id/e0/ -rw-r--r-- root/root 132600 2020-08-23 00:02 ./usr/lib/debug/.build-id/e0/e1e29237cbd63e4b7c54e5f761fc3c7ddee4af.debug drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/lib/debug/.dwz/x86_64-linux-gnu/ -rw-r--r-- root/root 6640 2020-08-23 00:02 ./usr/lib/debug/.dwz/x86_64-linux-gnu/bio-rainbow.debug drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/share/ drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-08-23 00:02 ./usr/share/doc/bio-rainbow-dbgsym -> bio-rainbow bio-rainbow_2.0.4+dfsg-2_amd64.deb ---------------------------------- new Debian package, version 2.0. size 60068 bytes: control archive=1704 bytes. 1361 bytes, 26 lines control 1642 bytes, 23 lines md5sums Package: bio-rainbow Version: 2.0.4+dfsg-2 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 190 Depends: libc6 (>= 2.38), perl:any Section: science Priority: optional Homepage: http://sourceforge.net/projects/bio-rainbow/ Description: clustering and assembling short reads for bioinformatics Efficient tool for clustering and assembling short reads, especially for RAD. . Rainbow is developed to provide an ultra-fast and memory-efficient solution to clustering and assembling short reads produced by RAD-seq. First, Rainbow clusters reads using a spaced seed method. Then, Rainbow implements a heterozygote calling like strategy to divide potential groups into haplotypes in a top-down manner. long a guided tree, it iteratively merges sibling leaves in a bottom-up manner if they are similar enough. Here, the similarity is defined by comparing the 2nd reads of a RAD segment. This approach tries to collapse heterozygote while discriminate repetitive sequences. At last, Rainbow uses a greedy algorithm to locally assemble merged reads into contigs. Rainbow not only outputs the optimal but also suboptimal assembly results. Based on simulation and a real guppy RAD-seq data, it is shown that Rainbow is more competent than the other tools in dealing with RAD-seq data. drwxr-xr-x root/root 0 2020-08-23 00:02 ./ drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/ drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/bin/ -rwxr-xr-x root/root 80120 2020-08-23 00:02 ./usr/bin/bio-rainbow -rwxr-xr-x root/root 31296 2020-08-23 00:02 ./usr/bin/ezmsim -rwxr-xr-x root/root 39152 2020-08-23 00:02 ./usr/bin/rbasm -rwxr-xr-x root/root 427 2015-07-27 18:28 ./usr/bin/select_all_rbcontig.pl -rwxr-xr-x root/root 535 2015-07-27 18:28 ./usr/bin/select_best_rbcontig.pl -rwxr-xr-x root/root 1597 2015-07-27 18:28 ./usr/bin/select_best_rbcontig_plus_read1.pl -rwxr-xr-x root/root 872 2015-07-27 18:28 ./usr/bin/select_sec_rbcontig.pl drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/share/ drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/share/doc/bio-rainbow/ -rw-r--r-- root/root 86 2020-08-23 00:02 ./usr/share/doc/bio-rainbow/README.Debian -rw-r--r-- root/root 731 2020-08-23 00:02 ./usr/share/doc/bio-rainbow/README.test -rw-r--r-- root/root 1932 2020-08-23 00:02 ./usr/share/doc/bio-rainbow/README.txt.gz -rw-r--r-- root/root 717 2020-08-23 00:02 ./usr/share/doc/bio-rainbow/changelog.Debian.gz -rw-r--r-- root/root 1869 2020-08-23 00:02 ./usr/share/doc/bio-rainbow/copyright drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/share/doc/bio-rainbow/examples/ -rw-r--r-- root/root 3321 2020-08-23 00:02 ./usr/share/doc/bio-rainbow/examples/R.1.fastq.gz -rw-r--r-- root/root 3568 2020-08-23 00:02 ./usr/share/doc/bio-rainbow/examples/R.2.fastq.gz -rw-r--r-- root/root 842 2020-08-23 00:02 ./usr/share/doc/bio-rainbow/run-unit-test drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/share/lintian/ drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 121 2020-08-23 00:02 ./usr/share/lintian/overrides/bio-rainbow drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/share/man/ drwxr-xr-x root/root 0 2020-08-23 00:02 ./usr/share/man/man1/ -rw-r--r-- root/root 928 2020-08-23 00:02 ./usr/share/man/man1/bio-rainbow.1.gz -rw-r--r-- root/root 405 2020-08-23 00:02 ./usr/share/man/man1/ezmsim.1.gz -rw-r--r-- root/root 439 2020-08-23 00:02 ./usr/share/man/man1/rbasm.1.gz -rw-r--r-- root/root 315 2020-08-23 00:02 ./usr/share/man/man1/select_all_rbcontig.pl.1.gz -rw-r--r-- root/root 316 2020-08-23 00:02 ./usr/share/man/man1/select_best_rbcontig.pl.1.gz -rw-r--r-- root/root 348 2020-08-23 00:02 ./usr/share/man/man1/select_best_rbcontig_plus_read1.pl.1.gz -rw-r--r-- root/root 317 2020-08-23 00:02 ./usr/share/man/man1/select_sec_rbcontig.pl.1.gz +------------------------------------------------------------------------------+ | Post Build Sun, 26 Apr 2026 10:04:13 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Sun, 26 Apr 2026 10:04:13 +0000 | +------------------------------------------------------------------------------+ Purging /build/bio-rainbow-YNrQy0 Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Sun, 26 Apr 2026 10:04:14 +0000 | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: full Build-Space: 2808 Build-Time: 19 Distribution: perl-5.42-throwaway Host Architecture: amd64 Install-Time: 8 Job: /srv/debomatic/incoming/bio-rainbow_2.0.4+dfsg-2.dsc Machine Architecture: amd64 Package: bio-rainbow Package-Time: 37 Source-Version: 2.0.4+dfsg-2 Space: 2808 Status: successful Version: 2.0.4+dfsg-2 -------------------------------------------------------------------------------- Finished at 2026-04-26T10:04:12Z Build needed 00:00:37, 2808k disk space