sbuild (Debian sbuild) 0.85.9 (29 May 2024) on carme.larted.org.uk +==============================================================================+ | reprof 1.0.1-8 (amd64) Wed, 05 Jun 2024 05:07:43 +0000 | +==============================================================================+ Package: reprof Version: 1.0.1-8 Source Version: 1.0.1-8 Distribution: perl-5.40-throwaway Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: full I: NOTICE: Log filtering will replace 'var/run/schroot/mount/perl-5.40-amd64-debomatic-cafd19ff-f953-4ce0-b51d-99a655e69059' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup reprof_1.0.1-8 perl-5.40-throwaway amd64 --------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup reprof_1.0.1-8 perl-5.40-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- I: NOTICE: Log filtering will replace 'build/reprof-BHZlBU/resolver-eyTP67' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 file:/srv/reprepro perl-5.40 InRelease [3039 B] Get:2 http://localhost:3142/debian unstable InRelease [198 kB] Get:3 http://localhost:3142/debian sid InRelease [198 kB] Get:1 file:/srv/reprepro perl-5.40 InRelease [3039 B] Get:4 http://localhost:3142/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:5 http://localhost:3142/debian unstable/main amd64 Packages T-2024-06-05-0204.17-F-2024-06-03-0205.12.pdiff [116 kB] Get:6 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:5 http://localhost:3142/debian unstable/main amd64 Packages T-2024-06-05-0204.17-F-2024-06-03-0205.12.pdiff [116 kB] Get:7 http://localhost:3142/debian sid/main Sources T-2024-06-05-0204.17-F-2024-06-03-0205.12.pdiff [76.9 kB] Get:7 http://localhost:3142/debian sid/main Sources T-2024-06-05-0204.17-F-2024-06-03-0205.12.pdiff [76.9 kB] Get:8 file:/srv/reprepro perl-5.40/main amd64 Packages [598 kB] Fetched 716 kB in 2s (323 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: bsdutils libblkid1 libmount1 libsmartcols1 libssl3t64 libuuid1 login passwd util-linux 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 5660 kB of archives. After this operation, 53.2 kB disk space will be freed. Get:1 http://localhost:3142/debian unstable/main amd64 bsdutils amd64 1:2.40.1-8 [104 kB] Get:2 http://localhost:3142/debian unstable/main amd64 login amd64 1:4.13+dfsg1-5 [590 kB] Get:3 http://localhost:3142/debian unstable/main amd64 libsmartcols1 amd64 2.40.1-8 [137 kB] Get:4 http://localhost:3142/debian unstable/main amd64 libuuid1 amd64 2.40.1-8 [34.7 kB] Get:5 http://localhost:3142/debian unstable/main amd64 libblkid1 amd64 2.40.1-8 [166 kB] Get:6 http://localhost:3142/debian unstable/main amd64 libmount1 amd64 2.40.1-8 [197 kB] Get:7 http://localhost:3142/debian unstable/main amd64 util-linux amd64 2.40.1-8 [1210 kB] Get:8 http://localhost:3142/debian unstable/main amd64 passwd amd64 1:4.13+dfsg1-5 [974 kB] Get:9 http://localhost:3142/debian unstable/main amd64 libssl3t64 amd64 3.2.2-1 [2246 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 5660 kB in 0s (120 MB/s) (Reading database ... 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Processing triggers for libc-bin (2.38-12) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- /srv/debomatic/incoming/reprof_1.0.1-8.dsc exists in /srv/debomatic/incoming; copying to chroot I: NOTICE: Log filtering will replace 'build/reprof-BHZlBU/reprof-1.0.1' with '<>' I: NOTICE: Log filtering will replace 'build/reprof-BHZlBU' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), libmodule-build-perl, debhelper, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 13), libmodule-build-perl, debhelper, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [650 B] Get:5 copy:/<>/apt_archive ./ Packages [682 B] Fetched 1941 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libdebhelper-perl libelf1t64 libfakeroot libfile-stripnondeterminism-perl libicu72 libmagic-mgc libmagic1t64 libmodule-build-perl libpipeline1 libtool libuchardet0 libxml2 m4 man-db po-debconf sensible-utils Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libmodule-signature-perl libpod-readme-perl libsoftware-license-perl libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libdebhelper-perl libelf1t64 libfakeroot libfile-stripnondeterminism-perl libicu72 libmagic-mgc libmagic1t64 libmodule-build-perl libpipeline1 libtool libuchardet0 libxml2 m4 man-db po-debconf sbuild-build-depends-main-dummy sensible-utils 0 upgraded, 33 newly installed, 0 to remove and 0 not upgraded. Need to get 19.4 MB of archives. After this operation, 74.5 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [896 B] Get:2 http://localhost:3142/debian unstable/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get:3 http://localhost:3142/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get:4 http://localhost:3142/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get:5 http://localhost:3142/debian unstable/main amd64 file amd64 1:5.45-3 [42.9 kB] Get:6 http://localhost:3142/debian unstable/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get:7 http://localhost:3142/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get:8 http://localhost:3142/debian unstable/main amd64 groff-base amd64 1.23.0-4 [1180 kB] Get:9 http://localhost:3142/debian unstable/main amd64 bsdextrautils amd64 2.40.1-8 [96.0 kB] Get:10 http://localhost:3142/debian unstable/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get:11 http://localhost:3142/debian unstable/main amd64 man-db amd64 2.12.1-1 [1411 kB] Get:12 http://localhost:3142/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get:13 http://localhost:3142/debian unstable/main amd64 autoconf all 2.71-3 [332 kB] Get:14 http://localhost:3142/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:15 http://localhost:3142/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:16 http://localhost:3142/debian unstable/main amd64 autopoint all 0.21-14 [496 kB] Get:17 http://localhost:3142/debian unstable/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get:18 http://localhost:3142/debian unstable/main amd64 libtool all 2.4.7-7 [517 kB] Get:19 http://localhost:3142/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:20 http://localhost:3142/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:21 http://localhost:3142/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get:22 http://localhost:3142/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get:23 http://localhost:3142/debian unstable/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get:24 http://localhost:3142/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:25 http://localhost:3142/debian unstable/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get:26 http://localhost:3142/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg-3 [670 kB] Get:27 http://localhost:3142/debian unstable/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get:28 http://localhost:3142/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:29 http://localhost:3142/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:30 http://localhost:3142/debian unstable/main amd64 debhelper all 13.15.3 [901 kB] Get:31 http://localhost:3142/debian unstable/main amd64 libfakeroot amd64 1.34-1 [28.9 kB] Get:32 http://localhost:3142/debian unstable/main amd64 fakeroot amd64 1.34-1 [74.0 kB] Get:33 http://localhost:3142/debian unstable/main amd64 libmodule-build-perl all 0.423400-2 [252 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 19.4 MB in 0s (162 MB/s) Selecting previously unselected package sensible-utils. (Reading database ... 21765 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3_amd64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-14+b1_amd64.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-4_amd64.deb ... Unpacking groff-base (1.23.0-4) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.1-8_amd64.deb ... Unpacking bsdextrautils (2.40.1-8) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.7-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.12.1-1_amd64.deb ... Unpacking man-db (2.12.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.191-1+b1_amd64.deb ... Unpacking libelf1t64:amd64 (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../23-libicu72_72.1-4+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-4+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../24-libxml2_2.12.7+dfsg-3_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg-3) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.21-14+b1_amd64.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package libfakeroot:amd64. Preparing to unpack .../29-libfakeroot_1.34-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.34-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../30-fakeroot_1.34-1_amd64.deb ... Unpacking fakeroot (1.34-1) ... Selecting previously unselected package libmodule-build-perl. Preparing to unpack .../31-libmodule-build-perl_0.423400-2_all.deb ... Adding 'diversion of /usr/bin/config_data to /usr/bin/config_data.diverted by libmodule-build-perl' Adding 'diversion of /usr/share/man/man1/config_data.1.gz to /usr/share/man/man1/config_data.diverted.1.gz by libmodule-build-perl' Unpacking libmodule-build-perl (0.423400-2) ... Selecting previously unselected package sbuild-build-depends-main-dummy. Preparing to unpack .../32-sbuild-build-depends-main-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.7-2) ... Setting up libicu72:amd64 (72.1-4+b1) ... Setting up bsdextrautils (2.40.1-8) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3) ... Setting up libfakeroot:amd64 (1.34-1) ... Setting up libelf1t64:amd64 (0.191-1+b1) ... Setting up libmodule-build-perl (0.423400-2) ... Setting up fakeroot (1.34-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.21-14) ... Setting up autoconf (2.71-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up libxml2:amd64 (2.12.7+dfsg-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.15.3) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.38-12) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-21-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) amd64 (x86_64) Toolchain package versions: binutils_2.42-4 dpkg-dev_1.22.6 g++-13_13.2.0-25 gcc-13_13.2.0-25 libc6-dev_2.38-12 libstdc++-13-dev_13.2.0-25 libstdc++6_14.1.0-1 linux-libc-dev_6.8.12-1 Package versions: adduser_3.137 apt_2.9.4 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-14 autotools-dev_20220109.1 base-files_13.2 base-passwd_3.6.3 bash_5.2.21-2+b1 binutils_2.42-4 binutils-common_2.42-4 binutils-x86-64-linux-gnu_2.42-4 bsdextrautils_2.40.1-8 bsdutils_1:2.40.1-8 build-essential_12.10 bzip2_1.0.8-5.1 coreutils_9.4-3.1 cpp_4:13.2.0-7 cpp-13_13.2.0-25 cpp-13-x86-64-linux-gnu_13.2.0-25 cpp-x86-64-linux-gnu_4:13.2.0-7 dash_0.5.12-8 debconf_1.5.86 debhelper_13.15.3 debian-archive-keyring_2023.4 debianutils_5.17 dh-autoreconf_20 dh-strip-nondeterminism_1.14.0-1 diffutils_1:3.10-1 dirmngr_2.2.43-7 dpkg_1.22.6 dpkg-dev_1.22.6 dwz_0.15-1+b1 eatmydata_131-2 fakeroot_1.34-1 file_1:5.45-3 findutils_4.9.0-6 g++_4:13.2.0-7 g++-13_13.2.0-25 g++-13-x86-64-linux-gnu_13.2.0-25 g++-x86-64-linux-gnu_4:13.2.0-7 gcc_4:13.2.0-7 gcc-13_13.2.0-25 gcc-13-base_13.2.0-25 gcc-13-x86-64-linux-gnu_13.2.0-25 gcc-14-base_14.1.0-1 gcc-x86-64-linux-gnu_4:13.2.0-7 gettext_0.21-14+b1 gettext-base_0.21-14+b1 gnupg_2.2.43-7 gnupg-l10n_2.2.43-7 gnupg-utils_2.2.43-7 gpg_2.2.43-7 gpg-agent_2.2.43-7 gpg-wks-client_2.2.43-7 gpgconf_2.2.43-7 gpgsm_2.2.43-7 gpgv_2.2.43-7 grep_3.11-4 groff-base_1.23.0-4 gzip_1.12-1.1 hostname_3.23+nmu2 init-system-helpers_1.66 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2 libapt-pkg6.0t64_2.9.4 libarchive-zip-perl_1.68-1 libasan8_14.1.0-1 libassuan0_2.5.6-1+b1 libatomic1_14.1.0-1 libattr1_1:2.5.2-1 libaudit-common_1:3.1.2-2.1 libaudit1_1:3.1.2-2.1 libbinutils_2.42-4 libblkid1_2.40.1-8 libbz2-1.0_1.0.8-5.1 libc-bin_2.38-12 libc-dev-bin_2.38-12 libc-l10n_2.38-12 libc6_2.38-12 libc6-dev_2.38-12 libcap-ng0_0.8.5-1 libcap2_1:2.66-5 libcc1-0_14.1.0-1 libcrypt-dev_1:4.4.36-4 libcrypt1_1:4.4.36-4 libctf-nobfd0_2.42-4 libctf0_2.42-4 libdb5.3t64_5.3.28+dfsg2-7 libdebconfclient0_0.272 libdebhelper-perl_13.15.3 libdpkg-perl_1.22.6 libeatmydata1_131-2 libelf1t64_0.191-1+b1 libfakeroot_1.34-1 libffi8_3.4.6-1 libfile-stripnondeterminism-perl_1.14.0-1 libgcc-13-dev_13.2.0-25 libgcc-s1_14.1.0-1 libgcrypt20_1.10.3-3 libgdbm-compat4t64_1.23-5.1+b1 libgdbm6t64_1.23-5.1+b1 libgmp10_2:6.3.0+dfsg-2+b1 libgnutls30t64_3.8.5-4 libgomp1_14.1.0-1 libgpg-error0_1.49-2 libgprofng0_2.42-4 libhogweed6t64_3.9.1-2.2 libhwasan0_14.1.0-1 libicu72_72.1-4+b1 libidn2-0_2.3.7-2 libisl23_0.26-3+b2 libitm1_14.1.0-1 libjansson4_2.14-2+b2 libksba8_1.6.6-1 libldap-2.5-0_2.5.17+dfsg-1+b1 liblsan0_14.1.0-1 liblz4-1_1.9.4-2 liblzma5_5.6.1+really5.4.5-1 libmagic-mgc_1:5.45-3 libmagic1t64_1:5.45-3 libmd0_1.1.0-2 libmodule-build-perl_0.423400-2 libmount1_2.40.1-8 libmpc3_1.3.1-1+b2 libmpfr6_4.2.1-1+b1 libncursesw6_6.5-2 libnettle8t64_3.9.1-2.2 libnpth0t64_1.6-3.1 libp11-kit0_0.25.3-5 libpam-modules_1.5.3-7 libpam-modules-bin_1.5.3-7 libpam-runtime_1.5.3-7 libpam0g_1.5.3-7 libpcre2-8-0_10.42-4+b1 libperl5.38t64_5.38.2-5 libperl5.40_5.40.0~rc1-1 libpipeline1_1.5.7-2 libquadmath0_14.1.0-1 libreadline8t64_8.2-4 libsasl2-2_2.1.28+dfsg1-6 libsasl2-modules-db_2.1.28+dfsg1-6 libseccomp2_2.5.5-1 libselinux1_3.5-2+b2 libsemanage-common_3.5-1 libsemanage2_3.5-1+b3 libsepol2_3.5-2+b1 libsframe1_2.42-4 libsmartcols1_2.40.1-8 libsqlite3-0_3.46.0-1 libssl3t64_3.2.2-1 libstdc++-13-dev_13.2.0-25 libstdc++6_14.1.0-1 libsystemd0_256~rc3-7 libtasn1-6_4.19.0-3+b2 libtinfo6_6.5-2 libtool_2.4.7-7 libtsan2_14.1.0-1 libubsan1_14.1.0-1 libuchardet0_0.0.8-1+b1 libudev1_256~rc3-7 libunistring5_1.2-1 libuuid1_2.40.1-8 libxml2_2.12.7+dfsg-3 libxxhash0_0.8.2-2+b1 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.8.12-1 locales-all_2.38-12 login_1:4.13+dfsg1-5 m4_1.4.19-4 make_4.3-4.1 man-db_2.12.1-1 mawk_1.3.4.20240123-1 ncurses-base_6.5-2 ncurses-bin_6.5-2 passwd_1:4.13+dfsg1-5 patch_2.7.6-7 perl_5.40.0~rc1-1 perl-base_5.40.0~rc1-1 perl-modules-5.38_5.38.2-5 perl-modules-5.40_5.40.0~rc1-1 pinentry-curses_1.2.1-3+b2 po-debconf_1.0.21+nmu1 readline-common_8.2-4 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.22 sysvinit-utils_3.09-1 tar_1.35+dfsg-3 usr-is-merged_39 util-linux_2.40.1-8 xz-utils_5.6.1+really5.4.5-1 zlib1g_1:1.3.dfsg+really1.3.1-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: reprof Binary: reprof, librg-reprof-bundle-perl Architecture: all Version: 1.0.1-8 Maintainer: Debian Med Packaging Team Uploaders: Peter Hoenigschmid , Laszlo Kajan , Andreas Tille Homepage: https://rostlab.org/ Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/reprof Vcs-Git: https://salsa.debian.org/med-team/reprof.git Testsuite: autopkgtest Testsuite-Triggers: @builddeps@, libai-fann-perl, pkg-perl-autopkgtest, pkg-perl-autopkgtest-heavy Build-Depends: debhelper-compat (= 13), libmodule-build-perl, debhelper Package-List: librg-reprof-bundle-perl deb perl optional arch=all reprof deb science optional arch=all Checksums-Sha1: 7f85dbf7cba54eefde3189cce1eee150910f3c6c 9041799 reprof_1.0.1.orig.tar.gz 886e3fd8deca11a7cbe7f81895d1964e876b32f6 5720 reprof_1.0.1-8.debian.tar.xz Checksums-Sha256: a6ad4a0595e6a152612c9bcd6ab86f9f4c7a649c5aaed7e06bde611e2e9346c2 9041799 reprof_1.0.1.orig.tar.gz 727a845ce46e187c51461d3dae643a78ed8cb65e01fdfaf52604e1d71747811d 5720 reprof_1.0.1-8.debian.tar.xz Files: 77e6f917af1667e93f5bae7c23f78d54 9041799 reprof_1.0.1.orig.tar.gz 334f58a8686746355f631580ddfe27d3 5720 reprof_1.0.1-8.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmHnG28RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFb0w/+KlkDdj9qAZdDHecVvh3NImIffUj/TEdO 3VhVaDNxudWcPVVBEivxc1CPd/nWQoWy6E6B7t2is3gruDywmIpvfbXsECHdWv66 M+L5VqqgCGMEBaXpE59d+jYZi14xadVZNg7lmC+F38ock5mnmJ/F5nCzrFtvyPW4 f44kyotJZPdnYX9JIxgY+6ECS/Vgjp1kO5Z04neEfsbJ0CUooLCGzbFtbGaJaf+h aGBl7XAWe2XX3XRGSkWaM4Xb9ghqB8vkUiHTcjvVeeRAB2VYVf+1iv9YSS1O0nit dR0g1NW0QdEkHDxfLa99OBTQqIF6+RksWpPg4VNf2RzCdMjin6+xxLgUoTVfc18e imAVEpvbOlF54z/IjBQele6lnyusBVqgCp/ghcGb2cGjcxql/A9EX7rlupb7WGpP 2oPER+dM76uteoZWsd/vrIp6uP0RxPyq6u5xz0sNulDZnz7uwyu24gpJuldEcD3z 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+------------------------------------------------------------------------------+ | Starting Timed Build Commands | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/starting-build-commands/no-network reprof_1.0.1-8 perl-5.40-throwaway amd64 --------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/starting-build-commands/no-network reprof_1.0.1-8 perl-5.40-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_GB.UTF-8 LANGUAGE=en_GB:en LC_ALL=C.UTF-8 LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so LOGNAME=debomatic PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/<> SCHROOT_ALIAS_NAME=perl-5.40-throwaway-amd64-debomatic SCHROOT_CHROOT_NAME=perl-5.40-amd64-debomatic SCHROOT_COMMAND=env SCHROOT_GID=110 SCHROOT_GROUP=sbuild SCHROOT_SESSION_ID=perl-5.40-amd64-debomatic-cafd19ff-f953-4ce0-b51d-99a655e69059 SCHROOT_UID=1002 SCHROOT_USER=debomatic SHELL=/bin/sh USER=debomatic dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -Zxz dpkg-buildpackage: info: source package reprof dpkg-buildpackage: info: source version 1.0.1-8 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source -Zxz --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_testdir dh_auto_clean dh_autoreconf_clean debian/rules override_dh_clean make[1]: Entering directory '/<>' find . -name Makefile -delete # restore reprof.spec which is removed in the build process if [ ! -e reprof.spec ] ; then sed 's/@VERSION@/1.0.1/' reprof.spec.in > reprof.spec ; fi dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/reprof.substvars debian/librg-reprof-bundle-perl.substvars debian/files rm -fr -- debian/reprof/ debian/tmp/ debian/librg-reprof-bundle-perl/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) make[1]: Leaving directory '/<>' dpkg-source -Zxz -b . dpkg-source: info: using source format '3.0 (quilt)' dpkg-source: info: building reprof using existing ./reprof_1.0.1.orig.tar.gz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: building reprof in reprof_1.0.1-8.debian.tar.xz dpkg-source: info: building reprof in reprof_1.0.1-8.dsc debian/rules binary dh binary dh_testdir dh_update_autotools_config dh_autoreconf find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.before grep -q ^XDT_ configure.ac autoreconf -f -i find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.after dh_auto_configure ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating Build.PL config.status: creating examples/Makefile config.status: creating lib/Makefile config.status: creating lib/RG/Makefile config.status: creating lib/RG/Reprof/Makefile config.status: creating reprof.spec config.status: creating scripts/Makefile config.status: creating share/Makefile debian/rules override_dh_auto_build make[1]: Entering directory '/<>' # Build process somehow removes lib/RG/Reprof.pm # make sure it exists to be able to build twice in a row dh_auto_build make -j2 make[2]: Entering directory '/<>' Making all in examples make[3]: Entering directory '/<>/examples' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/examples' Making all in scripts make[3]: Entering directory '/<>/scripts' sed -e 's|__bindir__|/usr/bin|g;s|__datadir__|/usr/share|g;s|__docdir__|/usr/share/doc/reprof|g;s|__pkgdatadir__|/usr/share/reprof|g;s|__PREFIX__|/usr|g;s|__sysconfdir__|/etc|g;s|__VERSION__|1.0.1|g;' "reprof" | \ pod2man -c 'User Commands' -r "1.0.1" -name REPROF > "reprof.1" make[3]: Leaving directory '/<>/scripts' Making all in lib make[3]: Entering directory '/<>/lib' Making all in RG make[4]: Entering directory '/<>/lib/RG' Making all in Reprof make[5]: Entering directory '/<>/lib/RG/Reprof' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/<>/lib/RG/Reprof' make[5]: Entering directory '/<>/lib/RG' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/<>/lib/RG' make[4]: Leaving directory '/<>/lib/RG' make[4]: Entering directory '/<>/lib' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/<>/lib' make[3]: Leaving directory '/<>/lib' Making all in share make[3]: Entering directory '/<>/share' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/share' make[3]: Entering directory '/<>' perl Build.PL installdirs=vendor && perl Build && touch build-stamp Can't find dist packages without a MANIFEST file Run 'Build manifest' to generate one WARNING: Possible missing or corrupt 'MANIFEST' file. Nothing to enter for 'provides' field in metafile. Created MYMETA.yml and MYMETA.json Creating new 'Build' script for 'reprof' version '1.0.1' Building reprof make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' if [ ! -e lib/RG/Reprof.pm ] ; then cp lib/RG/Reprof.pm.mk lib/RG/Reprof.pm ; fi make[1]: Leaving directory '/<>' dh_auto_test make -j2 check "TESTSUITEFLAGS=-j2 --verbose" VERBOSE=1 make[1]: Entering directory '/<>' Making check in examples make[2]: Entering directory '/<>/examples' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/<>/examples' Making check in scripts make[2]: Entering directory '/<>/scripts' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/<>/scripts' Making check in lib make[2]: Entering directory '/<>/lib' Making check in RG make[3]: Entering directory '/<>/lib/RG' Making check in Reprof make[4]: Entering directory '/<>/lib/RG/Reprof' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/<>/lib/RG/Reprof' make[4]: Entering directory '/<>/lib/RG' make[4]: Nothing to be done for 'check-am'. make[4]: Leaving directory '/<>/lib/RG' make[3]: Leaving directory '/<>/lib/RG' make[3]: Entering directory '/<>/lib' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/<>/lib' make[2]: Leaving directory '/<>/lib' Making check in share make[2]: Entering directory '/<>/share' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/<>/share' make[2]: Entering directory '/<>' make[2]: Nothing to be done for 'check-am'. make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' rm -fr -- /tmp/dh-xdg-rundir-278OBBZU create-stamp debian/debhelper-build-stamp dh_testroot dh_prep rm -f -- debian/reprof.substvars debian/librg-reprof-bundle-perl.substvars rm -fr -- debian/.debhelper/generated/reprof/ debian/reprof/ debian/tmp/ debian/.debhelper/generated/librg-reprof-bundle-perl/ debian/librg-reprof-bundle-perl/ dh_installdirs rm -f debian/librg-reprof-bundle-perl.debhelper.log debian/reprof.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/<>' # The following will run: perl Build install dh_auto_install install -m0755 -d /<>/debian/tmp make -j2 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/<>' Making install in examples make[3]: Entering directory '/<>/examples' make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/doc/reprof/examples' /usr/bin/install -c -m 644 ./example.Q ./example.Q.reprof ./example.fasta ./example.fasta.reprof ./mutations.txt ./mutations_example.Q.reprof ./mutations_example.Q.reprof_F172P ./mutations_example.Q.reprof_M1Q ./mutations_example.Q.reprof_N34Y ./mutations_example.Q.reprof_ORI '/<>/debian/tmp/usr/share/doc/reprof/examples' make[4]: Leaving directory '/<>/examples' make[3]: Leaving directory '/<>/examples' Making install in scripts make[3]: Entering directory '/<>/scripts' make[4]: Entering directory '/<>/scripts' /usr/bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/man/man1' /usr/bin/install -c reprof '/<>/debian/tmp/usr/bin' make install-exec-hook /usr/bin/install -c -m 644 reprof.1 '/<>/debian/tmp/usr/share/man/man1' make install-data-hook make[5]: Entering directory '/<>/scripts' sed -i -e 's|__bindir__|/usr/bin|g;s|__datadir__|/usr/share|g;s|__docdir__|/usr/share/doc/reprof|g;s|__pkgdatadir__|/usr/share/reprof|g;s|__PREFIX__|/usr|g;s|__sysconfdir__|/etc|g;s|__VERSION__|1.0.1|g;' "/<>/debian/tmp/usr/bin/reprof" make[5]: Entering directory '/<>/scripts' sed -i -e 's|__bindir__|/usr/bin|g;s|__datadir__|/usr/share|g;s|__docdir__|/usr/share/doc/reprof|g;s|__pkgdatadir__|/usr/share/reprof|g;s|__PREFIX__|/usr|g;s|__sysconfdir__|/etc|g;s|__VERSION__|1.0.1|g;' "/<>/debian/tmp/usr/share/man/man1/reprof.1" make[5]: Leaving directory '/<>/scripts' make[5]: Leaving directory '/<>/scripts' make[4]: Leaving directory '/<>/scripts' make[3]: Leaving directory '/<>/scripts' Making install in lib make[3]: Entering directory '/<>/lib' Making install in RG make[4]: Entering directory '/<>/lib/RG' Making install in Reprof make[5]: Entering directory '/<>/lib/RG/Reprof' make[6]: Entering directory '/<>/lib/RG/Reprof' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/lib/RG/Reprof' make[5]: Leaving directory '/<>/lib/RG/Reprof' make[5]: Entering directory '/<>/lib/RG' make[6]: Entering directory '/<>/lib/RG' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/lib/RG' make[5]: Leaving directory '/<>/lib/RG' make[4]: Leaving directory '/<>/lib/RG' make[4]: Entering directory '/<>/lib' make[5]: Entering directory '/<>/lib' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/<>/lib' make[4]: Leaving directory '/<>/lib' make[3]: Leaving directory '/<>/lib' Making install in share make[3]: Entering directory '/<>/share' make[4]: Entering directory '/<>/share' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/reprof' /usr/bin/install -c -m 644 ./a.model ./b.model ./bb.model ./bu.model ./fa.model ./fb.model ./fbb.model ./fbu.model ./fu.model ./fub.model ./fuu.model ./u.model ./ub.model ./uu.model ./a.features ./b.features ./bb.features ./bu.features ./fa.features ./fb.features ./fbb.features ./fbu.features ./fu.features ./fub.features ./fuu.features ./u.features ./ub.features ./uu.features '/<>/debian/tmp/usr/share/reprof' make[4]: Leaving directory '/<>/share' make[3]: Leaving directory '/<>/share' make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' make[4]: Nothing to be done for 'install-exec-am'. perl Build install destdir=/<>/debian/tmp create_packlist=0 Building reprof Installing /<>/debian/tmp/usr/share/perl5/RG/Reprof.pm Installing /<>/debian/tmp/usr/share/perl5/RG/Reprof/Converter.pm Installing /<>/debian/tmp/usr/share/perl5/RG/Reprof/blastPsiMat.pm Installing /<>/debian/tmp/usr/share/perl5/RG/Reprof/fasta.pm Installing /<>/debian/tmp/usr/share/man/man3/RG::Reprof.3pm make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' # But we also need this to get the correct script DESTDIR=/<>/debian/tmp make install make[2]: Entering directory '/<>' Making install in examples make[3]: Entering directory '/<>/examples' make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/doc/reprof/examples' /usr/bin/install -c -m 644 ./example.Q ./example.Q.reprof ./example.fasta ./example.fasta.reprof ./mutations.txt ./mutations_example.Q.reprof ./mutations_example.Q.reprof_F172P ./mutations_example.Q.reprof_M1Q ./mutations_example.Q.reprof_N34Y ./mutations_example.Q.reprof_ORI '/<>/debian/tmp/usr/share/doc/reprof/examples' make[4]: Leaving directory '/<>/examples' make[3]: Leaving directory '/<>/examples' Making install in scripts make[3]: Entering directory '/<>/scripts' make[4]: Entering directory '/<>/scripts' /usr/bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/install -c reprof '/<>/debian/tmp/usr/bin' make install-exec-hook make[5]: Entering directory '/<>/scripts' sed -i -e 's|__bindir__|/usr/bin|g;s|__datadir__|/usr/share|g;s|__docdir__|/usr/share/doc/reprof|g;s|__pkgdatadir__|/usr/share/reprof|g;s|__PREFIX__|/usr|g;s|__sysconfdir__|/etc|g;s|__VERSION__|1.0.1|g;' "/<>/debian/tmp/usr/bin/reprof" make[5]: Leaving directory '/<>/scripts' /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 reprof.1 '/<>/debian/tmp/usr/share/man/man1' make install-data-hook make[5]: Entering directory '/<>/scripts' sed -i -e 's|__bindir__|/usr/bin|g;s|__datadir__|/usr/share|g;s|__docdir__|/usr/share/doc/reprof|g;s|__pkgdatadir__|/usr/share/reprof|g;s|__PREFIX__|/usr|g;s|__sysconfdir__|/etc|g;s|__VERSION__|1.0.1|g;' "/<>/debian/tmp/usr/share/man/man1/reprof.1" make[5]: Leaving directory '/<>/scripts' make[4]: Leaving directory '/<>/scripts' make[3]: Leaving directory '/<>/scripts' Making install in lib make[3]: Entering directory '/<>/lib' Making install in RG make[4]: Entering directory '/<>/lib/RG' Making install in Reprof make[5]: Entering directory '/<>/lib/RG/Reprof' make[6]: Entering directory '/<>/lib/RG/Reprof' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/lib/RG/Reprof' make[5]: Leaving directory '/<>/lib/RG/Reprof' make[5]: Entering directory '/<>/lib/RG' make[6]: Entering directory '/<>/lib/RG' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/lib/RG' make[5]: Leaving directory '/<>/lib/RG' make[4]: Leaving directory '/<>/lib/RG' make[4]: Entering directory '/<>/lib' make[5]: Entering directory '/<>/lib' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/<>/lib' make[4]: Leaving directory '/<>/lib' make[3]: Leaving directory '/<>/lib' Making install in share make[3]: Entering directory '/<>/share' make[4]: Entering directory '/<>/share' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/reprof' /usr/bin/install -c -m 644 ./a.model ./b.model ./bb.model ./bu.model ./fa.model ./fb.model ./fbb.model ./fbu.model ./fu.model ./fub.model ./fuu.model ./u.model ./ub.model ./uu.model ./a.features ./b.features ./bb.features ./bu.features ./fa.features ./fb.features ./fbb.features ./fbu.features ./fu.features ./fub.features ./fuu.features ./u.features ./ub.features ./uu.features '/<>/debian/tmp/usr/share/reprof' make[4]: Leaving directory '/<>/share' make[3]: Leaving directory '/<>/share' make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' make[4]: Nothing to be done for 'install-exec-am'. perl Build install destdir=/<>/debian/tmp create_packlist=0 Building reprof make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_install install -m0755 -d debian/reprof//usr cp --reflink=auto -a debian/tmp/usr/bin debian/reprof//usr/ install -m0755 -d debian/reprof//usr/share/doc/reprof cp --reflink=auto -a debian/tmp/usr/share/doc/reprof/examples debian/reprof//usr/share/doc/reprof/ install -m0755 -d debian/reprof//usr/share/man cp --reflink=auto -a debian/tmp/usr/share/man/man1 debian/reprof//usr/share/man/ install -m0755 -d debian/librg-reprof-bundle-perl//usr/share cp --reflink=auto -a debian/tmp/usr/share/perl5 debian/tmp/usr/share/reprof debian/librg-reprof-bundle-perl//usr/share/ install -m0755 -d debian/librg-reprof-bundle-perl//usr/share/man cp --reflink=auto -a debian/tmp/usr/share/man/man3 debian/librg-reprof-bundle-perl//usr/share/man/ dh_installdocs install -m0755 -d debian/reprof/usr/share/doc/reprof cp --reflink=auto -a ./debian/README.test debian/reprof/usr/share/doc/reprof cp --reflink=auto -a ./debian/tests/installation-test debian/reprof/usr/share/doc/reprof cp --reflink=auto -a ./debian/tests/test-models.t debian/reprof/usr/share/doc/reprof chmod -R u\+rw,go=rX debian/reprof/usr/share/doc install -p -m0644 debian/copyright debian/reprof/usr/share/doc/reprof/copyright install -m0755 -d debian/librg-reprof-bundle-perl/usr/share/doc/librg-reprof-bundle-perl install -p -m0644 debian/copyright debian/librg-reprof-bundle-perl/usr/share/doc/librg-reprof-bundle-perl/copyright dh_installchangelogs install -m0755 -d debian/reprof/usr/share/doc/reprof install -p -m0644 debian/.debhelper/generated/reprof/dh_installchangelogs.dch.trimmed debian/reprof/usr/share/doc/reprof/changelog.Debian install -p -m0644 ./ChangeLog debian/reprof/usr/share/doc/reprof/changelog install -m0755 -d debian/librg-reprof-bundle-perl/usr/share/doc/librg-reprof-bundle-perl install -p -m0644 debian/.debhelper/generated/librg-reprof-bundle-perl/dh_installchangelogs.dch.trimmed debian/librg-reprof-bundle-perl/usr/share/doc/librg-reprof-bundle-perl/changelog.Debian install -p -m0644 ./ChangeLog debian/librg-reprof-bundle-perl/usr/share/doc/librg-reprof-bundle-perl/changelog dh_installexamples dh_installman man-recode --to-code UTF-8 --suffix .dh-new debian/reprof/usr/share/man/man1/reprof.1 man-recode --to-code UTF-8 --suffix .dh-new debian/librg-reprof-bundle-perl/usr/share/man/man3/RG::Reprof.3pm mv debian/reprof/usr/share/man/man1/reprof.1.dh-new debian/reprof/usr/share/man/man1/reprof.1 chmod 0644 -- debian/reprof/usr/share/man/man1/reprof.1 mv debian/librg-reprof-bundle-perl/usr/share/man/man3/RG::Reprof.3pm.dh-new debian/librg-reprof-bundle-perl/usr/share/man/man3/RG::Reprof.3pm chmod 0644 -- debian/librg-reprof-bundle-perl/usr/share/man/man3/RG::Reprof.3pm dh_installcatalogs dh_installcron dh_installdebconf install -m0755 -d debian/reprof/DEBIAN install -m0755 -d debian/librg-reprof-bundle-perl/DEBIAN dh_installemacsen dh_installifupdown dh_installinfo dh_installinit dh_installtmpfiles dh_installsystemd dh_installsystemduser dh_installmenu dh_installmime dh_installmodules dh_installlogcheck dh_installlogrotate dh_installpam dh_installppp dh_installudev dh_installgsettings dh_installinitramfs dh_installalternatives dh_bugfiles dh_ucf dh_lintian dh_icons dh_perl mv debian/reprof.substvars.new debian/reprof.substvars mv debian/librg-reprof-bundle-perl.substvars.new debian/librg-reprof-bundle-perl.substvars rmdir --ignore-fail-on-non-empty --parents debian/librg-reprof-bundle-perl/usr/share/perl5 dh_usrlocal dh_link dh_installwm dh_installxfonts dh_strip_nondeterminism rm -f debian/librg-reprof-bundle-perl.debhelper.log debian/reprof.debhelper.log debian/rules override_dh_compress make[1]: Entering directory '/<>' dh_compress -Xexample.Q cd debian/reprof cd debian/librg-reprof-bundle-perl chmod a-x usr/share/doc/reprof/changelog usr/share/doc/reprof/changelog.Debian usr/share/man/man1/reprof.1 chmod a-x usr/share/doc/librg-reprof-bundle-perl/changelog usr/share/doc/librg-reprof-bundle-perl/changelog.Debian usr/share/man/man3/RG::Reprof.3pm gzip -9nf usr/share/doc/reprof/changelog usr/share/doc/reprof/changelog.Debian usr/share/man/man1/reprof.1 gzip -9nf usr/share/doc/librg-reprof-bundle-perl/changelog usr/share/doc/librg-reprof-bundle-perl/changelog.Debian usr/share/man/man3/RG::Reprof.3pm cd '/<>' cd '/<>' make[1]: Leaving directory '/<>' dh_fixperms find debian/reprof ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/librg-reprof-bundle-perl ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/reprof/usr/share/doc -type f -a -true -a ! -regex 'debian/reprof/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/librg-reprof-bundle-perl/usr/share/doc -type f -a -true -a ! -regex 'debian/librg-reprof-bundle-perl/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/reprof/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/librg-reprof-bundle-perl/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/reprof/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/librg-reprof-bundle-perl/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/reprof -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/librg-reprof-bundle-perl/usr/share/perl5 -type f -perm -5 -name '*.pm' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a-X find debian/reprof/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/librg-reprof-bundle-perl -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 dh_missing dh_installdeb install -m0755 -d debian/reprof/DEBIAN install -m0755 -d debian/librg-reprof-bundle-perl/DEBIAN dh_gencontrol install -m0755 -d debian/reprof/DEBIAN echo misc:Depends= >> debian/reprof.substvars echo misc:Pre-Depends= >> debian/reprof.substvars dpkg-gencontrol -preprof -ldebian/changelog -Tdebian/reprof.substvars -cdebian/control -Pdebian/reprof install -m0755 -d debian/librg-reprof-bundle-perl/DEBIAN echo misc:Depends= >> debian/librg-reprof-bundle-perl.substvars echo misc:Pre-Depends= >> debian/librg-reprof-bundle-perl.substvars dpkg-gencontrol -plibrg-reprof-bundle-perl -ldebian/changelog -Tdebian/librg-reprof-bundle-perl.substvars -cdebian/control -Pdebian/librg-reprof-bundle-perl chmod 0644 -- debian/reprof/DEBIAN/control chmod 0644 -- debian/librg-reprof-bundle-perl/DEBIAN/control dh_md5sums install -m0755 -d debian/reprof/DEBIAN install -m0755 -d debian/librg-reprof-bundle-perl/DEBIAN cd debian/reprof >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/librg-reprof-bundle-perl >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/reprof/DEBIAN/md5sums chmod 0644 -- debian/librg-reprof-bundle-perl/DEBIAN/md5sums dh_builddeb dpkg-deb --root-owner-group --build debian/reprof .. dpkg-deb --root-owner-group --build debian/librg-reprof-bundle-perl .. dpkg-deb: building package 'reprof' in '../reprof_1.0.1-8_all.deb'. dpkg-deb: building package 'librg-reprof-bundle-perl' in '../librg-reprof-bundle-perl_1.0.1-8_all.deb'. dpkg-genbuildinfo -O../reprof_1.0.1-8_amd64.buildinfo dpkg-genchanges -O../reprof_1.0.1-8_amd64.changes dpkg-genchanges: info: not including original source code in upload dpkg-source -Zxz --after-build . dpkg-buildpackage: info: binary and diff upload (original source NOT included) -------------------------------------------------------------------------------- Build finished at 2024-06-05T05:08:26Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ reprof_1.0.1-8_amd64.changes: ----------------------------- Format: 1.8 Date: Tue, 18 Jan 2022 20:49:55 +0100 Source: reprof Binary: librg-reprof-bundle-perl reprof Architecture: source all Version: 1.0.1-8 Distribution: perl-5.40-throwaway Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: librg-reprof-bundle-perl - protein secondary structure and accessibility predictor (perl mod reprof - protein secondary structure and accessibility predictor Changes: reprof (1.0.1-8) unstable; urgency=medium . * Stop using pp_popcon * Upstream download vanished * Standards-Version: 4.6.0 (routine-update) * debhelper-compat 13 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Add missing build dependency on dh addon. * Replace use of deprecated $ADTTMP with $AUTOPKGTEST_TMP. Checksums-Sha1: 7bdfdd93787ad71732e0dd60ab236fb41ace7057 1311 reprof_1.0.1-8.dsc 4dd9d31b2e78931a3ddaf30db10ecbe1e7322cfa 5728 reprof_1.0.1-8.debian.tar.xz e46b240ccdf83828a20548347e7e63455cc7792d 7478872 librg-reprof-bundle-perl_1.0.1-8_all.deb 7ea1fd7a7801d57324fd0154a9c31354abfb6046 14260 reprof_1.0.1-8_all.deb e7799a09d29b200b31c10532a61b229510dcec41 5204 reprof_1.0.1-8_amd64.buildinfo Checksums-Sha256: 72c09c78592e2f5ab18f0b220be7b6f98725859148099d62e276f723b4854c04 1311 reprof_1.0.1-8.dsc f50045926fd6a2d7d370487ddcad2e8a577453ff6229e471e8abbce9b5d77c2e 5728 reprof_1.0.1-8.debian.tar.xz beaa3627ee5a5c272fddcedacdee7d3fa1f56507b107b934e5f33d6975fbefa9 7478872 librg-reprof-bundle-perl_1.0.1-8_all.deb 2e98e8572d476c3862d6f4bfac622f578304377931bb6c80c65919bdf8692575 14260 reprof_1.0.1-8_all.deb 97173748b42bfadff4214f0adbb7f390a51fef426379d512bc4dbdeca8a44828 5204 reprof_1.0.1-8_amd64.buildinfo Files: 974f4272ca2aef154ca725bd6fbdedd0 1311 science optional reprof_1.0.1-8.dsc ccb28522268ce3ede425bf20e1aa9b27 5728 science optional reprof_1.0.1-8.debian.tar.xz 1196e8551f371f875a8cbe44e4b0921d 7478872 perl optional librg-reprof-bundle-perl_1.0.1-8_all.deb c01d131d27c9a5712621bf0ee7bb7775 14260 science optional reprof_1.0.1-8_all.deb 2321e7c464976fe2e8ecd53a8c8e698f 5204 science optional reprof_1.0.1-8_amd64.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: reprof Binary: librg-reprof-bundle-perl reprof Architecture: all source Version: 1.0.1-8 Checksums-Md5: 974f4272ca2aef154ca725bd6fbdedd0 1311 reprof_1.0.1-8.dsc 1196e8551f371f875a8cbe44e4b0921d 7478872 librg-reprof-bundle-perl_1.0.1-8_all.deb c01d131d27c9a5712621bf0ee7bb7775 14260 reprof_1.0.1-8_all.deb Checksums-Sha1: 7bdfdd93787ad71732e0dd60ab236fb41ace7057 1311 reprof_1.0.1-8.dsc e46b240ccdf83828a20548347e7e63455cc7792d 7478872 librg-reprof-bundle-perl_1.0.1-8_all.deb 7ea1fd7a7801d57324fd0154a9c31354abfb6046 14260 reprof_1.0.1-8_all.deb Checksums-Sha256: 72c09c78592e2f5ab18f0b220be7b6f98725859148099d62e276f723b4854c04 1311 reprof_1.0.1-8.dsc beaa3627ee5a5c272fddcedacdee7d3fa1f56507b107b934e5f33d6975fbefa9 7478872 librg-reprof-bundle-perl_1.0.1-8_all.deb 2e98e8572d476c3862d6f4bfac622f578304377931bb6c80c65919bdf8692575 14260 reprof_1.0.1-8_all.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Wed, 05 Jun 2024 05:08:26 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-14), autotools-dev (= 20220109.1), base-files (= 13.2), base-passwd (= 3.6.3), bash (= 5.2.21-2+b1), binutils (= 2.42-4), binutils-common (= 2.42-4), binutils-x86-64-linux-gnu (= 2.42-4), bsdextrautils (= 2.40.1-8), bsdutils (= 1:2.40.1-8), build-essential (= 12.10), bzip2 (= 1.0.8-5.1), coreutils (= 9.4-3.1), cpp (= 4:13.2.0-7), cpp-13 (= 13.2.0-25), cpp-13-x86-64-linux-gnu (= 13.2.0-25), cpp-x86-64-linux-gnu (= 4:13.2.0-7), dash (= 0.5.12-8), debconf (= 1.5.86), debhelper (= 13.15.3), debianutils (= 5.17), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.0-1), diffutils (= 1:3.10-1), dpkg (= 1.22.6), dpkg-dev (= 1.22.6), dwz (= 0.15-1+b1), file (= 1:5.45-3), findutils (= 4.9.0-6), g++ (= 4:13.2.0-7), g++-13 (= 13.2.0-25), g++-13-x86-64-linux-gnu (= 13.2.0-25), g++-x86-64-linux-gnu (= 4:13.2.0-7), gcc (= 4:13.2.0-7), gcc-13 (= 13.2.0-25), gcc-13-base (= 13.2.0-25), gcc-13-x86-64-linux-gnu (= 13.2.0-25), gcc-14-base (= 14.1.0-1), gcc-x86-64-linux-gnu (= 4:13.2.0-7), gettext (= 0.21-14+b1), gettext-base (= 0.21-14+b1), grep (= 3.11-4), groff-base (= 1.23.0-4), gzip (= 1.12-1.1), hostname (= 3.23+nmu2), init-system-helpers (= 1.66), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-2), libarchive-zip-perl (= 1.68-1), libasan8 (= 14.1.0-1), libatomic1 (= 14.1.0-1), libattr1 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6.5-2), ncurses-bin (= 6.5-2), patch (= 2.7.6-7), perl (= 5.40.0~rc1-1), perl-base (= 5.40.0~rc1-1), perl-modules-5.40 (= 5.40.0~rc1-1), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.22), sysvinit-utils (= 3.09-1), tar (= 1.35+dfsg-3), usr-is-merged (= 39), util-linux (= 2.40.1-8), xz-utils (= 5.6.1+really5.4.5-1), zlib1g (= 1:1.3.dfsg+really1.3.1-1) Environment: DEB_BUILD_OPTIONS="parallel=2" LANG="en_GB.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" LD_LIBRARY_PATH="/usr/lib/libeatmydata" SOURCE_DATE_EPOCH="1642535395" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ librg-reprof-bundle-perl_1.0.1-8_all.deb ---------------------------------------- new Debian package, version 2.0. size 7478872 bytes: control archive=1576 bytes. 726 bytes, 18 lines control 2337 bytes, 36 lines md5sums Package: librg-reprof-bundle-perl Source: reprof Version: 1.0.1-8 Architecture: all Maintainer: Debian Med Packaging Team Installed-Size: 21253 Depends: perl:any, libai-fann-perl Section: perl Priority: optional Homepage: https://rostlab.org/ Description: protein secondary structure and accessibility predictor (perl module) 'reprof' is an improved implementation of 'prof', a popular protein secondary structure and accessibility predictor. Prediction is either done from protein sequence alone or from an alignment - the latter should be used for optimal performance. . This package provides the perl modules implementing 'reprof' along with the necessary data files. drwxr-xr-x root/root 0 2022-01-18 19:49 ./ drwxr-xr-x root/root 0 2022-01-18 19:49 ./usr/ drwxr-xr-x root/root 0 2022-01-18 19:49 ./usr/share/ drwxr-xr-x root/root 0 2022-01-18 19:49 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-01-18 19:49 ./usr/share/doc/librg-reprof-bundle-perl/ -rw-r--r-- root/root 734 2022-01-18 19:49 ./usr/share/doc/librg-reprof-bundle-perl/changelog.Debian.gz -rw-r--r-- root/root 265 2012-01-13 15:41 ./usr/share/doc/librg-reprof-bundle-perl/changelog.gz -rw-r--r-- root/root 1357 2022-01-18 19:49 ./usr/share/doc/librg-reprof-bundle-perl/copyright drwxr-xr-x root/root 0 2022-01-18 19:49 ./usr/share/man/ drwxr-xr-x root/root 0 2022-01-18 19:49 ./usr/share/man/man3/ -rw-r--r-- root/root 1787 2022-01-18 19:49 ./usr/share/man/man3/RG::Reprof.3pm.gz drwxr-xr-x root/root 0 2022-01-18 19:49 ./usr/share/perl5/ drwxr-xr-x root/root 0 2022-01-18 19:49 ./usr/share/perl5/RG/ -rw-r--r-- root/root 18542 2022-01-18 19:49 ./usr/share/perl5/RG/Reprof.pm drwxr-xr-x root/root 0 2022-01-18 19:49 ./usr/share/perl5/RG/Reprof/ -rw-r--r-- root/root 5667 2022-01-18 19:49 ./usr/share/perl5/RG/Reprof/Converter.pm -rw-r--r-- root/root 1905 2022-01-18 19:49 ./usr/share/perl5/RG/Reprof/blastPsiMat.pm -rw-r--r-- root/root 6000 2022-01-18 19:49 ./usr/share/perl5/RG/Reprof/fasta.pm drwxr-xr-x root/root 0 2022-01-18 19:49 ./usr/share/reprof/ -rw-r--r-- root/root 459 2022-01-18 19:49 ./usr/share/reprof/a.features -rw-r--r-- root/root 1128778 2022-01-18 19:49 ./usr/share/reprof/a.model -rw-r--r-- root/root 454 2022-01-18 19:49 ./usr/share/reprof/b.features -rw-r--r-- root/root 1158427 2022-01-18 19:49 ./usr/share/reprof/b.model -rw-r--r-- root/root 523 2022-01-18 19:49 ./usr/share/reprof/bb.features -rw-r--r-- root/root 2646384 2022-01-18 19:49 ./usr/share/reprof/bb.model -rw-r--r-- root/root 523 2022-01-18 19:49 ./usr/share/reprof/bu.features -rw-r--r-- root/root 2571822 2022-01-18 19:49 ./usr/share/reprof/bu.model -rw-r--r-- root/root 402 2022-01-18 19:49 ./usr/share/reprof/fa.features -rw-r--r-- root/root 566486 2022-01-18 19:49 ./usr/share/reprof/fa.model -rw-r--r-- root/root 391 2022-01-18 19:49 ./usr/share/reprof/fb.features -rw-r--r-- root/root 969013 2022-01-18 19:49 ./usr/share/reprof/fb.model -rw-r--r-- root/root 461 2022-01-18 19:49 ./usr/share/reprof/fbb.features -rw-r--r-- root/root 1439947 2022-01-18 19:49 ./usr/share/reprof/fbb.model -rw-r--r-- root/root 461 2022-01-18 19:49 ./usr/share/reprof/fbu.features -rw-r--r-- root/root 866249 2022-01-18 19:49 ./usr/share/reprof/fbu.model -rw-r--r-- root/root 392 2022-01-18 19:49 ./usr/share/reprof/fu.features -rw-r--r-- root/root 1814340 2022-01-18 19:49 ./usr/share/reprof/fu.model -rw-r--r-- root/root 462 2022-01-18 19:49 ./usr/share/reprof/fub.features -rw-r--r-- root/root 424211 2022-01-18 19:49 ./usr/share/reprof/fub.model -rw-r--r-- root/root 462 2022-01-18 19:49 ./usr/share/reprof/fuu.features -rw-r--r-- root/root 1713895 2022-01-18 19:49 ./usr/share/reprof/fuu.model -rw-r--r-- root/root 454 2022-01-18 19:49 ./usr/share/reprof/u.features -rw-r--r-- root/root 1589338 2022-01-18 19:49 ./usr/share/reprof/u.model -rw-r--r-- root/root 523 2022-01-18 19:49 ./usr/share/reprof/ub.features -rw-r--r-- root/root 2863605 2022-01-18 19:49 ./usr/share/reprof/ub.model -rw-r--r-- root/root 523 2022-01-18 19:49 ./usr/share/reprof/uu.features -rw-r--r-- root/root 1935481 2022-01-18 19:49 ./usr/share/reprof/uu.model reprof_1.0.1-8_all.deb ---------------------- new Debian package, version 2.0. size 14260 bytes: control archive=1188 bytes. 746 bytes, 18 lines control 1401 bytes, 18 lines md5sums Package: reprof Version: 1.0.1-8 Architecture: all Maintainer: Debian Med Packaging Team Installed-Size: 98 Depends: perl:any, librg-reprof-bundle-perl Section: science Priority: optional Homepage: https://rostlab.org/ Description: protein secondary structure and accessibility predictor 'reprof' is an improved implementation of 'prof', a popular protein secondary structure and accessibility predictor. Prediction is either done from protein sequence alone or from an alignment - the latter should be used for optimal performance. . This package provides the 'reprof' command. It is only a command line interface to the functionality provided by the modules in librg-reprof-bundle-perl. drwxr-xr-x root/root 0 2022-01-18 19:49 ./ drwxr-xr-x root/root 0 2022-01-18 19:49 ./usr/ drwxr-xr-x root/root 0 2022-01-18 19:49 ./usr/bin/ -rwxr-xr-x root/root 3977 2022-01-18 19:49 ./usr/bin/reprof drwxr-xr-x root/root 0 2022-01-18 19:49 ./usr/share/ drwxr-xr-x root/root 0 2022-01-18 19:49 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-01-18 19:49 ./usr/share/doc/reprof/ -rw-r--r-- root/root 1265 2022-01-18 19:49 ./usr/share/doc/reprof/README.test -rw-r--r-- root/root 723 2022-01-18 19:49 ./usr/share/doc/reprof/changelog.Debian.gz -rw-r--r-- root/root 265 2012-01-13 15:41 ./usr/share/doc/reprof/changelog.gz -rw-r--r-- root/root 1357 2022-01-18 19:49 ./usr/share/doc/reprof/copyright drwxr-xr-x root/root 0 2022-01-18 19:49 ./usr/share/doc/reprof/examples/ -rw-r--r-- root/root 28389 2022-01-18 19:49 ./usr/share/doc/reprof/examples/example.Q -rw-r--r-- root/root 5957 2022-01-18 19:49 ./usr/share/doc/reprof/examples/example.Q.reprof -rw-r--r-- root/root 182 2022-01-18 19:49 ./usr/share/doc/reprof/examples/example.fasta -rw-r--r-- root/root 6017 2022-01-18 19:49 ./usr/share/doc/reprof/examples/example.fasta.reprof -rw-r--r-- root/root 15 2022-01-18 19:49 ./usr/share/doc/reprof/examples/mutations.txt -rw-r--r-- root/root 5957 2022-01-18 19:49 ./usr/share/doc/reprof/examples/mutations_example.Q.reprof -rw-r--r-- root/root 6019 2022-01-18 19:49 ./usr/share/doc/reprof/examples/mutations_example.Q.reprof_F172P -rw-r--r-- root/root 6016 2022-01-18 19:49 ./usr/share/doc/reprof/examples/mutations_example.Q.reprof_M1Q -rw-r--r-- root/root 6011 2022-01-18 19:49 ./usr/share/doc/reprof/examples/mutations_example.Q.reprof_N34Y -rw-r--r-- root/root 6017 2022-01-18 19:49 ./usr/share/doc/reprof/examples/mutations_example.Q.reprof_ORI -rw-r--r-- root/root 1783 2022-01-18 19:49 ./usr/share/doc/reprof/installation-test -rw-r--r-- root/root 560 2022-01-18 19:49 ./usr/share/doc/reprof/test-models.t drwxr-xr-x root/root 0 2022-01-18 19:49 ./usr/share/man/ drwxr-xr-x root/root 0 2022-01-18 19:49 ./usr/share/man/man1/ -rw-r--r-- root/root 2179 2022-01-18 19:49 ./usr/share/man/man1/reprof.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: full Build-Space: 94492 Build-Time: 31 Distribution: perl-5.40-throwaway Host Architecture: amd64 Install-Time: 4 Job: /srv/debomatic/incoming/reprof_1.0.1-8.dsc Machine Architecture: amd64 Package: reprof Package-Time: 43 Source-Version: 1.0.1-8 Space: 94492 Status: successful Version: 1.0.1-8 -------------------------------------------------------------------------------- Finished at 2024-06-05T05:08:26Z Build needed 00:00:43, 94492k disk space