sbuild (Debian sbuild) 0.88.2 (16 January 2025) on carme.larted.org.uk +==============================================================================+ | librg-utils-perl 1.0.43-9 (amd64) Tue, 21 Jan 2025 18:18:45 +0000 | +==============================================================================+ Package: librg-utils-perl Version: 1.0.43-9 Source Version: 1.0.43-9 Distribution: perl-5.40-throwaway Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: full I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... +------------------------------------------------------------------------------+ | Chroot Setup Commands Tue, 21 Jan 2025 18:18:46 +0000 | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup librg-utils-perl_1.0.43-9 perl-5.40-throwaway amd64 -------------------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup librg-utils-perl_1.0.43-9 perl-5.40-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- I: Setting up apt archive... +------------------------------------------------------------------------------+ | Update chroot Tue, 21 Jan 2025 18:18:46 +0000 | +------------------------------------------------------------------------------+ Get:1 file:/srv/reprepro perl-5.40 InRelease [3030 B] Get:1 file:/srv/reprepro perl-5.40 InRelease [3030 B] Get:2 file:/srv/reprepro perl-5.40/main amd64 Packages [8875 B] Get:3 http://deb.debian.org/debian unstable InRelease [205 kB] Get:4 http://localhost:3142/debian sid InRelease [205 kB] Get:5 http://deb.debian.org/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:6 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:7 http://deb.debian.org/debian unstable/main amd64 Packages T-2025-01-21-1411.34-F-2025-01-20-0805.29.pdiff [97.8 kB] Get:8 http://localhost:3142/debian sid/main Sources T-2025-01-21-1411.34-F-2025-01-20-0805.29.pdiff [94.6 kB] Get:7 http://deb.debian.org/debian unstable/main amd64 Packages T-2025-01-21-1411.34-F-2025-01-20-0805.29.pdiff [97.8 kB] Get:8 http://localhost:3142/debian sid/main Sources T-2025-01-21-1411.34-F-2025-01-20-0805.29.pdiff [94.6 kB] Fetched 730 kB in 7s (107 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt libapt-pkg6.0t64 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 2494 kB of archives. After this operation, 4096 B disk space will be freed. Get:1 http://deb.debian.org/debian unstable/main amd64 libapt-pkg6.0t64 amd64 2.9.24 [1114 kB] Get:2 http://deb.debian.org/debian unstable/main amd64 apt amd64 2.9.24 [1380 kB] Fetched 2494 kB in 0s (65.1 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 23043 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0t64_2.9.24_amd64.deb ... Unpacking libapt-pkg6.0t64:amd64 (2.9.24) over (2.9.23) ... Setting up libapt-pkg6.0t64:amd64 (2.9.24) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 23043 files and directories currently installed.) Preparing to unpack .../archives/apt_2.9.24_amd64.deb ... Unpacking apt (2.9.24) over (2.9.23) ... Setting up apt (2.9.24) ... Processing triggers for libc-bin (2.40-5) ... +------------------------------------------------------------------------------+ | Fetch source files Tue, 21 Jan 2025 18:18:56 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/debomatic/incoming/librg-utils-perl_1.0.43-9.dsc exists in /srv/debomatic/incoming; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Tue, 21 Jan 2025 18:18:57 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), perl, libmodule-build-perl, debhelper, build-essential Filtered Build-Depends: debhelper-compat (= 13), perl, libmodule-build-perl, debhelper, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/librg-utils-perl-kdj3XB/resolver-Aoe0Ba/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/build/librg-utils-perl-kdj3XB/resolver-Aoe0Ba/apt_archive ./ InRelease Get:2 copy:/build/librg-utils-perl-kdj3XB/resolver-Aoe0Ba/apt_archive ./ Release [609 B] Ign:3 copy:/build/librg-utils-perl-kdj3XB/resolver-Aoe0Ba/apt_archive ./ Release.gpg Get:4 copy:/build/librg-utils-perl-kdj3XB/resolver-Aoe0Ba/apt_archive ./ Sources [639 B] Get:5 copy:/build/librg-utils-perl-kdj3XB/resolver-Aoe0Ba/apt_archive ./ Packages [678 B] Fetched 1926 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libdebhelper-perl libelf1t64 libfile-stripnondeterminism-perl libicu72 libmagic-mgc libmagic1t64 libmodule-build-perl libpipeline1 libtool libuchardet0 libxml2 m4 man-db po-debconf sensible-utils Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libmodule-signature-perl libpod-readme-perl libsoftware-license-perl libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libdebhelper-perl libelf1t64 libfile-stripnondeterminism-perl libicu72 libmagic-mgc libmagic1t64 libmodule-build-perl libpipeline1 libtool libuchardet0 libxml2 m4 man-db po-debconf sbuild-build-depends-main-dummy sensible-utils 0 upgraded, 31 newly installed, 0 to remove and 0 not upgraded. Need to get 20.3 MB of archives. After this operation, 76.3 MB of additional disk space will be used. Get:1 copy:/build/librg-utils-perl-kdj3XB/resolver-Aoe0Ba/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [872 B] Get:2 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:3 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get:4 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get:5 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get:6 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.1-1 [243 kB] Get:7 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get:8 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-7 [1185 kB] Get:9 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.4-1 [92.2 kB] Get:10 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:11 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get:12 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-5 [294 kB] Get:13 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get:14 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:15 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:16 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.1-1 [770 kB] Get:17 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.24.1 [90.9 kB] Get:18 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-2 [539 kB] Get:19 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:20 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:21 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-1 [19.6 kB] Get:22 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-1 [8584 B] Get:23 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get:24 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:25 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-6 [9421 kB] Get:26 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get:27 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.1-1 [1680 kB] Get:28 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:29 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:30 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.24.1 [920 kB] Get:31 http://deb.debian.org/debian unstable/main amd64 libmodule-build-perl all 0.423400-2 [252 kB] Preconfiguring packages ... Fetched 20.3 MB in 0s (124 MB/s) Selecting previously unselected package sensible-utils. (Reading database ... 23043 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-1_amd64.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:amd64. 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Selecting previously unselected package libxml2:amd64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.23.1-1_amd64.deb ... Unpacking gettext (0.23.1-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.24.1_all.deb ... Unpacking debhelper (13.24.1) ... Selecting previously unselected package libmodule-build-perl. Preparing to unpack .../29-libmodule-build-perl_0.423400-2_all.deb ... Adding 'diversion of /usr/bin/config_data to /usr/bin/config_data.diverted by libmodule-build-perl' Adding 'diversion of /usr/share/man/man1/config_data.1.gz to /usr/share/man/man1/config_data.diverted.1.gz by libmodule-build-perl' Unpacking libmodule-build-perl (0.423400-2) ... Selecting previously unselected package sbuild-build-depends-main-dummy. Preparing to unpack .../30-sbuild-build-depends-main-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libicu72:amd64 (72.1-6) ... Setting up bsdextrautils (2.40.4-1) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.1) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-5) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up libmodule-build-perl (0.423400-2) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.23.1-1) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-1) ... Setting up gettext (0.23.1-1) ... Setting up libtool (2.5.4-2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-1) ... Setting up groff-base (1.23.0-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.1) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.40-5) ... +------------------------------------------------------------------------------+ | Check architectures Tue, 21 Jan 2025 18:19:01 +0000 | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in all) +------------------------------------------------------------------------------+ | Build environment Tue, 21 Jan 2025 18:19:02 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.11.10-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.10-1 (2024-11-23) amd64 (x86_64) Toolchain package versions: binutils_2.43.50.20250108-1 dpkg-dev_1.22.14 g++-13_13.3.0-12 g++-14_14.2.0-14 gcc-13_13.3.0-12 gcc-14_14.2.0-14 libc6-dev_2.40-5 libstdc++-13-dev_13.3.0-12 libstdc++-14-dev_14.2.0-14 libstdc++6_14.2.0-14 linux-libc-dev_6.12.10-1 Package versions: adduser_3.137 apt_2.9.24 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.23.1-1 autotools-dev_20220109.1 base-files_13.6 base-passwd_3.6.6 bash_5.2.37-1 binutils_2.43.50.20250108-1 binutils-common_2.43.50.20250108-1 binutils-x86-64-linux-gnu_2.43.50.20250108-1 bsdextrautils_2.40.4-1 bsdutils_1:2.40.4-1 build-essential_12.12 bzip2_1.0.8-6 coreutils_9.5-1+b1 cpp_4:14.2.0-1 cpp-13_13.3.0-12 cpp-13-x86-64-linux-gnu_13.3.0-12 cpp-14_14.2.0-14 cpp-14-x86-64-linux-gnu_14.2.0-14 cpp-x86-64-linux-gnu_4:14.2.0-1 dash_0.5.12-11 debconf_1.5.89 debhelper_13.24.1 debian-archive-keyring_2023.4 debianutils_5.21 dh-autoreconf_20 dh-strip-nondeterminism_1.14.1-1 diffutils_1:3.10-2 dirmngr_2.2.46-1+b1 dpkg_1.22.14 dpkg-dev_1.22.14 dwz_0.15-1+b1 eatmydata_131-2 file_1:5.45-3+b1 findutils_4.10.0-3 g++_4:14.2.0-1 g++-13_13.3.0-12 g++-13-x86-64-linux-gnu_13.3.0-12 g++-14_14.2.0-14 g++-14-x86-64-linux-gnu_14.2.0-14 g++-x86-64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-13_13.3.0-12 gcc-13-base_13.3.0-12 gcc-13-x86-64-linux-gnu_13.3.0-12 gcc-14_14.2.0-14 gcc-14-base_14.2.0-14 gcc-14-x86-64-linux-gnu_14.2.0-14 gcc-x86-64-linux-gnu_4:14.2.0-1 gettext_0.23.1-1 gettext-base_0.23.1-1 gnupg_2.2.46-1 gnupg-l10n_2.2.46-1 gnupg-utils_2.2.46-1+b1 gpg_2.2.46-1+b1 gpg-agent_2.2.46-1+b1 gpg-wks-client_2.2.46-1+b1 gpgconf_2.2.46-1+b1 gpgsm_2.2.46-1+b1 gpgv_2.2.46-1+b1 grep_3.11-4 groff-base_1.23.0-7 gzip_1.13-1 hostname_3.25 init-system-helpers_1.68 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2+b1 libapt-pkg6.0t64_2.9.24 libarchive-zip-perl_1.68-1 libasan8_14.2.0-14 libassuan0_2.5.6-1+b1 libassuan9_3.0.1-2 libatomic1_14.2.0-14 libattr1_1:2.5.2-2 libaudit-common_1:4.0.2-2 libaudit1_1:4.0.2-2+b1 libbinutils_2.43.50.20250108-1 libblkid1_2.40.4-1 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libc-bin_2.40-5 libc-dev-bin_2.40-5 libc-l10n_2.40-5 libc6_2.40-5 libc6-dev_2.40-5 libcap-ng0_0.8.5-4 libcap2_1:2.66-5+b1 libcc1-0_14.2.0-14 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.43.50.20250108-1 libctf0_2.43.50.20250108-1 libdb5.3t64_5.3.28+dfsg2-9 libdebconfclient0_0.277 libdebhelper-perl_13.24.1 libdpkg-perl_1.22.14 libeatmydata1_131-2+b1 libelf1t64_0.192-4 libffi8_3.4.6-1 libfile-stripnondeterminism-perl_1.14.1-1 libgcc-13-dev_13.3.0-12 libgcc-14-dev_14.2.0-14 libgcc-s1_14.2.0-14 libgcrypt20_1.11.0-7 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgmp10_2:6.3.0+dfsg-3 libgnutls30t64_3.8.8-2 libgomp1_14.2.0-14 libgpg-error0_1.51-3 libgprofng0_2.43.50.20250108-1 libhogweed6t64_3.10-1+b1 libhwasan0_14.2.0-14 libicu72_72.1-6 libidn2-0_2.3.7-2+b1 libisl23_0.27-1 libitm1_14.2.0-14 libjansson4_2.14-2+b3 libksba8_1.6.7-2+b1 libldap-2.5-0_2.5.19+dfsg-1 libldap2_2.6.9+dfsg-1 liblsan0_14.2.0-14 liblz4-1_1.9.4-4 liblzma5_5.6.3-1+b1 libmagic-mgc_1:5.45-3+b1 libmagic1t64_1:5.45-3+b1 libmd0_1.1.0-2+b1 libmodule-build-perl_0.423400-2 libmount1_2.40.4-1 libmpc3_1.3.1-1+b3 libmpfr6_4.2.1-1+b2 libncursesw6_6.5-2+b1 libnettle8t64_3.10-1+b1 libnpth0t64_1.8-2 libp11-kit0_0.25.5-3 libpam-modules_1.5.3-7+b1 libpam-modules-bin_1.5.3-7+b1 libpam-runtime_1.5.3-7 libpam0g_1.5.3-7+b1 libpcre2-8-0_10.44-5 libperl5.38t64_5.38.2-5 libperl5.40_5.40.1-1 libpipeline1_1.5.8-1 libquadmath0_14.2.0-14 libreadline8t64_8.2-6 libsasl2-2_2.1.28+dfsg1-8+b1 libsasl2-modules-db_2.1.28+dfsg1-8+b1 libseccomp2_2.5.5-2 libselinux1_3.7-3+b1 libsemanage-common_3.7-2 libsemanage2_3.7-2+b1 libsepol2_3.7-1 libsframe1_2.43.50.20250108-1 libsmartcols1_2.40.4-1 libsqlite3-0_3.46.1-1 libssl3t64_3.4.0-2 libstdc++-13-dev_13.3.0-12 libstdc++-14-dev_14.2.0-14 libstdc++6_14.2.0-14 libsystemd0_257.2-2 libtasn1-6_4.19.0-3+b3 libtinfo6_6.5-2+b1 libtool_2.5.4-2 libtsan2_14.2.0-14 libubsan1_14.2.0-14 libuchardet0_0.0.8-1+b2 libudev1_257.2-2 libunistring5_1.3-1 libuuid1_2.40.4-1 libxml2_2.12.7+dfsg+really2.9.14-0.2+b1 libxxhash0_0.8.3-2 libzstd1_1.5.6+dfsg-2 linux-libc-dev_6.12.10-1 locales-all_2.40-5 login_1:4.16.0-2+really2.40.4-1 login.defs_1:4.16.0-7 m4_1.4.19-5 make_4.4.1-1 man-db_2.13.0-1 mawk_1.3.4.20240905-1 ncurses-base_6.5-2 ncurses-bin_6.5-2+b1 openssl-provider-legacy_3.4.0-2 passwd_1:4.16.0-7 patch_2.7.6-7 perl_5.40.1-1 perl-base_5.40.1-1 perl-modules-5.38_5.38.2-5 perl-modules-5.40_5.40.1-1 pinentry-curses_1.3.1-2 po-debconf_1.0.21+nmu1 readline-common_8.2-6 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.24 sqv_1.2.1-5 sysvinit-utils_3.13-1 tar_1.35+dfsg-3.1 usr-is-merged_39+nmu2 util-linux_2.40.4-1 xz-utils_5.6.3-1+b1 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build Tue, 21 Jan 2025 18:19:02 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: librg-utils-perl Binary: librg-utils-perl Architecture: all Version: 1.0.43-9 Maintainer: Debian Med Packaging Team Uploaders: Guy Yachdav , Laszlo Kajan , Andreas Tille Homepage: https://predictprotein.org/ Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/librg-utils-perl Vcs-Git: https://salsa.debian.org/med-team/librg-utils-perl.git Build-Depends: debhelper-compat (= 13), perl, libmodule-build-perl, debhelper Package-List: librg-utils-perl deb perl optional arch=all Checksums-Sha1: 7f502f36e38414d7046ad9295c0e6c88c09d34f9 222433 librg-utils-perl_1.0.43.orig.tar.gz 5ce64da62010d10dc0a5ab415e383f3de88d3f1f 4512 librg-utils-perl_1.0.43-9.debian.tar.xz Checksums-Sha256: 961dda0196688e156a0702ff4609067a3454199ee1e537a5b9229ebe9310a260 222433 librg-utils-perl_1.0.43.orig.tar.gz 550c94bebd8286bf56d67ab3409b1a31560b63aeb8a1bf46d2ca05a42b9c0926 4512 librg-utils-perl_1.0.43-9.debian.tar.xz Files: 72955ad3760af32cac8061c198cfff96 222433 librg-utils-perl_1.0.43.orig.tar.gz 55094e21677f3e4eb2f4954bee9f7c8f 4512 librg-utils-perl_1.0.43-9.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmdi+DARHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtF1vQ/8CTnmzK0lcFxqlVuCrsSFKBU96fVefyDI yP6HUkWulVHXDcSedz93j5KEN2Lg8Oyrr3I8pCuOKEpCx1O5xUXFqIfYk9nA6tyc HUiD/qT9TtzmBV9+Z8k+X0gjQlPBpI0xWdvDo3x28IeL0h1bwvfpqktJ/DspW2sh n3emo3EKUocOjeQKeeLXGmEZe6vz/eHqdMDtHXZQyvvA27Fe/I2hKNjBQX2eLnyF ef0Hq9F/7p7+fv8VK8/dPZzS+61WEGElsYMmCi5HKZaDQNPGK/qYvPOyN2VfpjSc okV6My+DE6GxDn2AyLllIKBh5CjyiDCCyGpliIbutp7pZcOIjaX0FiaZ5vt1uph1 Xsob9SH+LiMpmagv2Mp7K+W+keb3YTUvSPCbeuAz+3mpQiHPwFO9FMerhpnqemGW MIm6/kAeHA6kjIizC2xztKfsJtpaKG5VRHpEGNUdKTk3X6iKpHBnxmtcZi47MhPH tOjVrLC2njwef7jY4wzX/oUP73K8zD6trGicc/9TG4QPo2rk8m0ly/lmtUaCXp42 xvtIPD0yRgFICkR54/lcFxJ7qzEAkD46l54M0bdNzh3P1m75lFWyL2+M6zePhrGj s1JL/wq+rKb9Wnx/Zlq0a6X3UCBiv/ysLSo6Cmwh9VvtSviRpo66Zo3aMlz/7vv9 gkfu56cqK4g= =FC9q -----END PGP SIGNATURE----- gpgv: Signature made Wed Dec 18 16:28:32 2024 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./librg-utils-perl_1.0.43-9.dsc: no acceptable signature found dpkg-source: info: extracting librg-utils-perl in /build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43 dpkg-source: info: unpacking librg-utils-perl_1.0.43.orig.tar.gz dpkg-source: info: unpacking librg-utils-perl_1.0.43-9.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying remove-defined-for-arrays.patch Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Timed Build Commands Tue, 21 Jan 2025 18:19:02 +0000 | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/starting-build-commands/no-network librg-utils-perl_1.0.43-9 perl-5.40-throwaway amd64 -------------------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/starting-build-commands/no-network librg-utils-perl_1.0.43-9 perl-5.40-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_GB.UTF-8 LANGUAGE=en_GB:en LC_ALL=C.UTF-8 LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so LOGNAME=debomatic PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43 SCHROOT_ALIAS_NAME=perl-5.40-throwaway-amd64-debomatic SCHROOT_CHROOT_NAME=perl-5.40-amd64-debomatic SCHROOT_COMMAND=env SCHROOT_GID=110 SCHROOT_GROUP=sbuild SCHROOT_SESSION_ID=perl-5.40-amd64-debomatic-836af4d0-f00a-43a8-932c-1f799e6866d6 SCHROOT_UID=1002 SCHROOT_USER=debomatic SHELL=/bin/sh USER=debomatic dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -Zxz dpkg-buildpackage: info: source package librg-utils-perl dpkg-buildpackage: info: source version 1.0.43-9 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source -Zxz --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' rm -rf autom4te.cache blib Build dh_auto_clean if [ -f Makefile ] ; then make distclean ; fi if [ -f Makefile.in.bak ] ; then mv Makefile.in.bak Makefile.in ; fi if [ -f configure.bak ] ; then mv configure.bak configure ; fi make[1]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' dh_clean dpkg-source -Zxz -b . dpkg-source: info: using source format '3.0 (quilt)' dpkg-source: info: building librg-utils-perl using existing ./librg-utils-perl_1.0.43.orig.tar.gz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: building librg-utils-perl in librg-utils-perl_1.0.43-9.debian.tar.xz dpkg-source: info: building librg-utils-perl in librg-utils-perl_1.0.43-9.dsc debian/rules binary dh binary dh_update_autotools_config dh_autoreconf Makefile.am:27: warning: '%'-style pattern rules are a GNU make extension debian/rules override_dh_auto_configure make[1]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' cp -a Makefile.in Makefile.in.bak cp -a configure configure.bak dh_auto_configure ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating Build.PL config.status: creating librg-utils-perl.spec config.status: creating lib/Makefile config.status: creating lib/RG/Makefile config.status: creating lib/RG/Utils/Makefile config.status: creating mat/Makefile make[1]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' dh_auto_build make -j2 make[1]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' Making all in lib make[2]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib' Making all in RG make[3]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG' Making all in Utils make[4]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG/Utils' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG/Utils' make[4]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG' make[3]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG' make[3]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib' make[2]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib' Making all in mat make[2]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/mat' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/mat' make[2]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' sed -e 's|__pkgdatadir__|/usr/share/librg-utils-perl|g;s|__sysconfdir__|/etc|g;s|__bindir__|/usr/bin|g;s|__VERSION__|1.0.43|g' "dbSwiss" | \ pod2man -c 'User Commands' -r "1.0.43" -name DBSWISS > "dbSwiss.1" perl Build.PL installdirs=vendor && perl Build manifest && perl Build && touch build-stamp Can't find dist packages without a MANIFEST file Run 'Build manifest' to generate one WARNING: Possible missing or corrupt 'MANIFEST' file. Nothing to enter for 'provides' field in metafile. Created MYMETA.yml and MYMETA.json Creating new 'Build' script for 'librg-utils-perl' version '1.0.43' File 'MANIFEST.SKIP' does not exist: Creating a temporary 'MANIFEST.SKIP' Added to MANIFEST: .pc/.quilt_patches Added to MANIFEST: .pc/.quilt_series Added to MANIFEST: .pc/.version Added to MANIFEST: .pc/applied-patches Added to MANIFEST: .pc/remove-defined-for-arrays.patch/lib/RG/Utils/Conv_hssp2saf.pm Added to MANIFEST: .pc/remove-defined-for-arrays.patch/lib/RG/Utils/Copf.pm Added to MANIFEST: .pc/remove-defined-for-arrays.patch/lib/RG/Utils/Hssp_filter.pm Added to MANIFEST: aclocal.m4 Added to MANIFEST: AUTHORS Added to MANIFEST: autom4te.cache/output.0 Added to MANIFEST: autom4te.cache/output.1 Added to MANIFEST: autom4te.cache/output.2 Added to MANIFEST: autom4te.cache/requests Added to MANIFEST: autom4te.cache/traces.0 Added to MANIFEST: autom4te.cache/traces.1 Added to MANIFEST: autom4te.cache/traces.2 Added to MANIFEST: blast2saf.pl Added to MANIFEST: blastpgp_to_saf.pl Added to MANIFEST: Build.PL Added to MANIFEST: Build.PL.in Added to MANIFEST: ChangeLog Added to MANIFEST: config.log Added to MANIFEST: config.status Added to MANIFEST: configure Added to MANIFEST: configure.ac Added to MANIFEST: conv_hssp2saf.pl Added to MANIFEST: copf.pl Added to MANIFEST: COPYING Added to MANIFEST: dbSwiss Added to MANIFEST: dbSwiss.1 Added to MANIFEST: debian/autoreconf.after Added to MANIFEST: debian/autoreconf.before Added to MANIFEST: debian/changelog Added to MANIFEST: debian/clean Added to MANIFEST: debian/control Added to MANIFEST: debian/copyright Added to MANIFEST: debian/librg-utils-perl.debhelper.log Added to MANIFEST: debian/patches/remove-defined-for-arrays.patch Added to MANIFEST: debian/patches/series Added to MANIFEST: debian/README.Debian Added to MANIFEST: debian/rules Added to MANIFEST: debian/salsa-ci.yml Added to MANIFEST: debian/source/format Added to MANIFEST: debian/upstream/metadata Added to MANIFEST: debian/watch Added to MANIFEST: hssp_filter.pl Added to MANIFEST: INSTALL Added to MANIFEST: install-sh Added to MANIFEST: lib/Makefile.am Added to MANIFEST: lib/Makefile.in Added to MANIFEST: lib/RG/Makefile.am Added to MANIFEST: lib/RG/Makefile.in Added to MANIFEST: lib/RG/Utils/Conv_hssp2saf.pm Added to MANIFEST: lib/RG/Utils/Copf.pm Added to MANIFEST: lib/RG/Utils/Hssp_filter.pm Added to MANIFEST: lib/RG/Utils/Makefile.am Added to MANIFEST: lib/RG/Utils/Makefile.in Added to MANIFEST: librg-utils-perl.spec Added to MANIFEST: librg-utils-perl.spec.in Added to MANIFEST: Makefile.am Added to MANIFEST: Makefile.in Added to MANIFEST: MANIFEST Added to MANIFEST: mat/Blast_blosum62.metric Added to MANIFEST: mat/Makefile.am Added to MANIFEST: mat/Makefile.in Added to MANIFEST: mat/Maxhom_Blosum.metric Added to MANIFEST: mat/Maxhom_GCG.metric Added to MANIFEST: mat/Maxhom_McLachlan.metric Added to MANIFEST: mat/Maxhom_Sec_Struc.metric Added to MANIFEST: mat/Maxhom_Struc_IO.metric Added to MANIFEST: missing Added to MANIFEST: NEWS Added to MANIFEST: README Added to MANIFEST: safFilterRed.pl Building librg-utils-perl make[2]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' make[1]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' dh_auto_test make -j2 check "TESTSUITEFLAGS=-j2 --verbose" VERBOSE=1 make[1]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' Making check in lib make[2]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib' Making check in RG make[3]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG' Making check in Utils make[4]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG/Utils' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG/Utils' make[4]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG' make[4]: Nothing to be done for 'check-am'. make[4]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG' make[3]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG' make[3]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib' make[2]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib' Making check in mat make[2]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/mat' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/mat' make[2]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' make[2]: Nothing to be done for 'check-am'. make[2]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' make[1]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' /usr/bin/make DESTDIR=/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/debian/librg-utils-perl install make[2]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' Making install in lib make[3]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib' Making install in RG make[4]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG' Making install in Utils make[5]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG/Utils' make[6]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG/Utils' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG/Utils' make[5]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG/Utils' make[5]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG' make[6]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG' make[5]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG' make[4]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib/RG' make[4]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib' make[5]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib' make[4]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib' make[3]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/lib' Making install in mat make[3]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/mat' make[4]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/mat' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/librg-utils-perl/mat' /usr/bin/install -c -m 644 ./Blast_blosum62.metric ./Maxhom_Blosum.metric ./Maxhom_GCG.metric ./Maxhom_McLachlan.metric ./Maxhom_Sec_Struc.metric ./Maxhom_Struc_IO.metric '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/librg-utils-perl/mat' make[4]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/mat' make[3]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/mat' make[3]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' make[4]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' make[4]: Nothing to be done for 'install-exec-am'. perl Build install destdir=/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/debian/librg-utils-perl create_packlist=0 Building librg-utils-perl Installing /build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/perl5/RG/Utils/Conv_hssp2saf.pm Installing /build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/perl5/RG/Utils/Copf.pm Installing /build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/perl5/RG/Utils/Hssp_filter.pm Installing /build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/man/man3/RG::Utils::Hssp_filter.3pm Installing /build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/man/man3/RG::Utils::Conv_hssp2saf.3pm Installing /build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/man/man3/RG::Utils::Copf.3pm /usr/bin/mkdir -p '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/librg-utils-perl' /usr/bin/install -c blast2saf.pl blastpgp_to_saf.pl conv_hssp2saf.pl copf.pl dbSwiss hssp_filter.pl safFilterRed.pl '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/librg-utils-perl' /usr/bin/mkdir -p '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/man/man1' /usr/bin/install -c -m 644 dbSwiss.1 '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/man/man1' /usr/bin/mkdir -p '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/man/man3' /usr/bin/make install-data-hook make[5]: Entering directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' for f in "/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/librg-utils-perl/copf.pl" "/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/librg-utils-perl/hssp_filter.pl"; do \ sed -i -e 's|__bindir__|/usr/bin|g;s|__datadir__|/usr/share|g;s|__docdir__|/usr/share/doc/librg-utils-perl|g;s|__pkgdatadir__|/usr/share/librg-utils-perl|g;s|__PREFIX__|/usr|g;s|__sysconfdir__|/etc|g;s|__VERSION__|1.0.43|g;' "$f"; \ done make[5]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' make[4]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' make[3]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' make[2]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' make[1]: Leaving directory '/build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'librg-utils-perl' in '../librg-utils-perl_1.0.43-9_all.deb'. dpkg-genbuildinfo -O../librg-utils-perl_1.0.43-9_amd64.buildinfo dpkg-genchanges -O../librg-utils-perl_1.0.43-9_amd64.changes dpkg-genchanges: info: not including original source code in upload dpkg-source -Zxz --after-build . dpkg-buildpackage: info: binary and diff upload (original source NOT included) -------------------------------------------------------------------------------- Build finished at 2025-01-21T18:19:13Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Tue, 21 Jan 2025 18:19:13 +0000 | +------------------------------------------------------------------------------+ librg-utils-perl_1.0.43-9_amd64.changes: ---------------------------------------- Format: 1.8 Date: Wed, 18 Dec 2024 17:26:28 +0100 Source: librg-utils-perl Binary: librg-utils-perl Architecture: source all Version: 1.0.43-9 Distribution: perl-5.40-throwaway Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: librg-utils-perl - parsers and format conversion utilities used by (e.g.) profphd Closes: 1045341 1049488 Changes: librg-utils-perl (1.0.43-9) unstable; urgency=medium . * Fix clean target Closes: #1045341, #1049488 * Standards-Version: 4.7.0 (routine-update) Checksums-Sha1: 9fb200ca1b21895f47d434dca456d62f2d0e804a 1223 librg-utils-perl_1.0.43-9.dsc 5ce64da62010d10dc0a5ab415e383f3de88d3f1f 4512 librg-utils-perl_1.0.43-9.debian.tar.xz 511a2c323b26a2ca1ab66f098bded29a1defe8da 107312 librg-utils-perl_1.0.43-9_all.deb 7e7c2da34dbf7b1c492f424663d6c1b754cfd2e7 5200 librg-utils-perl_1.0.43-9_amd64.buildinfo Checksums-Sha256: 42348066a6dd97c3b49b0088b17db3d0a48f11f8b9f10be3d637eea5d5a604b1 1223 librg-utils-perl_1.0.43-9.dsc 550c94bebd8286bf56d67ab3409b1a31560b63aeb8a1bf46d2ca05a42b9c0926 4512 librg-utils-perl_1.0.43-9.debian.tar.xz 8f56cb907b3692e9b32896eb8e2399f25ef34701211dda09f95ea759e255301b 107312 librg-utils-perl_1.0.43-9_all.deb c3892f6f6ccb30d6045170af5d91cbaf7b4f2449152561bc27ca4c190c00a55c 5200 librg-utils-perl_1.0.43-9_amd64.buildinfo Files: 4a34d9ed0ace20e21df7a1043eecf90f 1223 perl optional librg-utils-perl_1.0.43-9.dsc 55094e21677f3e4eb2f4954bee9f7c8f 4512 perl optional librg-utils-perl_1.0.43-9.debian.tar.xz 856e89de3d10a0f4356b95aa8e8f970a 107312 perl optional librg-utils-perl_1.0.43-9_all.deb 33fe5bc76d8683d6762855bddd9c4701 5200 perl optional librg-utils-perl_1.0.43-9_amd64.buildinfo +------------------------------------------------------------------------------+ | Buildinfo Tue, 21 Jan 2025 18:19:13 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: librg-utils-perl Binary: librg-utils-perl Architecture: all source Version: 1.0.43-9 Checksums-Md5: 4a34d9ed0ace20e21df7a1043eecf90f 1223 librg-utils-perl_1.0.43-9.dsc 856e89de3d10a0f4356b95aa8e8f970a 107312 librg-utils-perl_1.0.43-9_all.deb Checksums-Sha1: 9fb200ca1b21895f47d434dca456d62f2d0e804a 1223 librg-utils-perl_1.0.43-9.dsc 511a2c323b26a2ca1ab66f098bded29a1defe8da 107312 librg-utils-perl_1.0.43-9_all.deb Checksums-Sha256: 42348066a6dd97c3b49b0088b17db3d0a48f11f8b9f10be3d637eea5d5a604b1 1223 librg-utils-perl_1.0.43-9.dsc 8f56cb907b3692e9b32896eb8e2399f25ef34701211dda09f95ea759e255301b 107312 librg-utils-perl_1.0.43-9_all.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Tue, 21 Jan 2025 18:19:13 +0000 Build-Path: /build/librg-utils-perl-kdj3XB/librg-utils-perl-1.0.43 Build-Tainted-By: usr-local-has-programs Installed-Build-Depends: autoconf (= 2.72-3), automake (= 1:1.16.5-1.3), autopoint (= 0.23.1-1), autotools-dev (= 20220109.1), base-files (= 13.6), base-passwd (= 3.6.6), bash (= 5.2.37-1), binutils (= 2.43.50.20250108-1), binutils-common (= 2.43.50.20250108-1), binutils-x86-64-linux-gnu (= 2.43.50.20250108-1), bsdextrautils (= 2.40.4-1), bsdutils (= 1:2.40.4-1), build-essential (= 12.12), bzip2 (= 1.0.8-6), coreutils (= 9.5-1+b1), cpp (= 4:14.2.0-1), cpp-13 (= 13.3.0-12), cpp-13-x86-64-linux-gnu (= 13.3.0-12), cpp-14 (= 14.2.0-14), cpp-14-x86-64-linux-gnu (= 14.2.0-14), cpp-x86-64-linux-gnu (= 4:14.2.0-1), dash (= 0.5.12-11), debconf (= 1.5.89), debhelper (= 13.24.1), debianutils (= 5.21), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.1-1), diffutils (= 1:3.10-2), dpkg (= 1.22.14), dpkg-dev (= 1.22.14), dwz (= 0.15-1+b1), file (= 1:5.45-3+b1), findutils (= 4.10.0-3), g++ (= 4:14.2.0-1), g++-14 (= 14.2.0-14), g++-14-x86-64-linux-gnu (= 14.2.0-14), g++-x86-64-linux-gnu (= 4:14.2.0-1), gcc (= 4:14.2.0-1), gcc-13 (= 13.3.0-12), gcc-13-base (= 13.3.0-12), gcc-13-x86-64-linux-gnu (= 13.3.0-12), gcc-14 (= 14.2.0-14), gcc-14-base (= 14.2.0-14), gcc-14-x86-64-linux-gnu (= 14.2.0-14), gcc-x86-64-linux-gnu (= 4:14.2.0-1), gettext (= 0.23.1-1), gettext-base (= 0.23.1-1), grep (= 3.11-4), groff-base (= 1.23.0-7), gzip (= 1.13-1), hostname (= 3.25), init-system-helpers (= 1.68), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-2+b1), libarchive-zip-perl (= 1.68-1), libasan8 (= 14.2.0-14), libatomic1 (= 14.2.0-14), libattr1 (= 1:2.5.2-2), libaudit-common (= 1:4.0.2-2), libaudit1 (= 1:4.0.2-2+b1), libbinutils (= 2.43.50.20250108-1), libblkid1 (= 2.40.4-1), libbz2-1.0 (= 1.0.8-6), libc-bin (= 2.40-5), libc-dev-bin (= 2.40-5), libc6 (= 2.40-5), libc6-dev (= 2.40-5), libcap-ng0 (= 0.8.5-4), libcap2 (= 1:2.66-5+b1), libcc1-0 (= 14.2.0-14), libcrypt-dev (= 1:4.4.38-1), libcrypt1 (= 1:4.4.38-1), libctf-nobfd0 (= 2.43.50.20250108-1), libctf0 (= 2.43.50.20250108-1), libdb5.3t64 (= 5.3.28+dfsg2-9), libdebconfclient0 (= 0.277), libdebhelper-perl (= 13.24.1), libdpkg-perl (= 1.22.14), libelf1t64 (= 0.192-4), libfile-stripnondeterminism-perl (= 1.14.1-1), libgcc-13-dev (= 13.3.0-12), libgcc-14-dev (= 14.2.0-14), libgcc-s1 (= 14.2.0-14), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgmp10 (= 2:6.3.0+dfsg-3), libgomp1 (= 14.2.0-14), libgprofng0 (= 2.43.50.20250108-1), libhwasan0 (= 14.2.0-14), libicu72 (= 72.1-6), libisl23 (= 0.27-1), libitm1 (= 14.2.0-14), libjansson4 (= 2.14-2+b3), liblsan0 (= 14.2.0-14), liblzma5 (= 5.6.3-1+b1), libmagic-mgc (= 1:5.45-3+b1), libmagic1t64 (= 1:5.45-3+b1), libmd0 (= 1.1.0-2+b1), libmodule-build-perl (= 0.423400-2), libmount1 (= 2.40.4-1), libmpc3 (= 1.3.1-1+b3), libmpfr6 (= 4.2.1-1+b2), libpam-modules (= 1.5.3-7+b1), libpam-modules-bin (= 1.5.3-7+b1), libpam-runtime (= 1.5.3-7), libpam0g (= 1.5.3-7+b1), libpcre2-8-0 (= 10.44-5), libperl5.40 (= 5.40.1-1), libpipeline1 (= 1.5.8-1), libquadmath0 (= 14.2.0-14), libseccomp2 (= 2.5.5-2), libselinux1 (= 3.7-3+b1), libsframe1 (= 2.43.50.20250108-1), libsmartcols1 (= 2.40.4-1), libssl3t64 (= 3.4.0-2), libstdc++-14-dev (= 14.2.0-14), libstdc++6 (= 14.2.0-14), libsystemd0 (= 257.2-2), libtinfo6 (= 6.5-2+b1), libtool (= 2.5.4-2), libtsan2 (= 14.2.0-14), libubsan1 (= 14.2.0-14), libuchardet0 (= 0.0.8-1+b2), libudev1 (= 257.2-2), libunistring5 (= 1.3-1), libuuid1 (= 2.40.4-1), libxml2 (= 2.12.7+dfsg+really2.9.14-0.2+b1), libzstd1 (= 1.5.6+dfsg-2), linux-libc-dev (= 6.12.10-1), m4 (= 1.4.19-5), make (= 4.4.1-1), man-db (= 2.13.0-1), mawk (= 1.3.4.20240905-1), ncurses-base (= 6.5-2), ncurses-bin (= 6.5-2+b1), openssl-provider-legacy (= 3.4.0-2), patch (= 2.7.6-7), perl (= 5.40.1-1), perl-base (= 5.40.1-1), perl-modules-5.40 (= 5.40.1-1), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.24), sysvinit-utils (= 3.13-1), tar (= 1.35+dfsg-3.1), util-linux (= 2.40.4-1), xz-utils (= 5.6.3-1+b1), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="parallel=2" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" LD_LIBRARY_PATH="/usr/lib/libeatmydata" SOURCE_DATE_EPOCH="1734539188" +------------------------------------------------------------------------------+ | Package contents Tue, 21 Jan 2025 18:19:13 +0000 | +------------------------------------------------------------------------------+ librg-utils-perl_1.0.43-9_all.deb --------------------------------- new Debian package, version 2.0. size 107312 bytes: control archive=1400 bytes. 769 bytes, 26 lines control 1889 bytes, 24 lines md5sums Package: librg-utils-perl Version: 1.0.43-9 Architecture: all Maintainer: Debian Med Packaging Team Installed-Size: 694 Depends: perl:any, liblist-moreutils-perl, profphd-utils Section: perl Priority: optional Homepage: https://predictprotein.org/ Description: parsers and format conversion utilities used by (e.g.) profphd This package contributes to the PredictProtein server for the automated structural annotation of protein sequences. It features as series of conversion tools like: . * blast2saf.pl * blastpgp_to_saf.pl * conv_hssp2saf.pl * copf.pl * hssp_filter.pl * safFilterRed.pl . which are supported by the modules: . * RG:Utils::Conv_hssp2saf * RG:Utils::Copf * RG:Utils::Hssp_filter drwxr-xr-x root/root 0 2024-12-18 16:26 ./ drwxr-xr-x root/root 0 2024-12-18 16:26 ./usr/ drwxr-xr-x root/root 0 2024-12-18 16:26 ./usr/share/ drwxr-xr-x root/root 0 2024-12-18 16:26 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-12-18 16:26 ./usr/share/doc/librg-utils-perl/ -rw-r--r-- root/root 235 2024-12-18 16:26 ./usr/share/doc/librg-utils-perl/README.Debian -rw-r--r-- root/root 641 2024-12-18 16:26 ./usr/share/doc/librg-utils-perl/changelog.Debian.gz -rw-r--r-- root/root 2208 2011-10-28 20:10 ./usr/share/doc/librg-utils-perl/changelog.gz -rw-r--r-- root/root 1816 2024-12-18 16:26 ./usr/share/doc/librg-utils-perl/copyright drwxr-xr-x root/root 0 2024-12-18 16:26 ./usr/share/librg-utils-perl/ -rwxr-xr-x root/root 28315 2024-12-18 16:26 ./usr/share/librg-utils-perl/blast2saf.pl -rwxr-xr-x root/root 19203 2024-12-18 16:26 ./usr/share/librg-utils-perl/blastpgp_to_saf.pl -rwxr-xr-x root/root 687 2024-12-18 16:26 ./usr/share/librg-utils-perl/conv_hssp2saf.pl -rwxr-xr-x root/root 792 2024-12-18 16:26 ./usr/share/librg-utils-perl/copf.pl -rwxr-xr-x root/root 4673 2024-12-18 16:26 ./usr/share/librg-utils-perl/dbSwiss -rwxr-xr-x root/root 799 2024-12-18 16:26 ./usr/share/librg-utils-perl/hssp_filter.pl drwxr-xr-x root/root 0 2024-12-18 16:26 ./usr/share/librg-utils-perl/mat/ -rw-r--r-- root/root 2122 2024-12-18 16:26 ./usr/share/librg-utils-perl/mat/Blast_blosum62.metric -rw-r--r-- root/root 4065 2024-12-18 16:26 ./usr/share/librg-utils-perl/mat/Maxhom_Blosum.metric -rw-r--r-- root/root 4337 2024-12-18 16:26 ./usr/share/librg-utils-perl/mat/Maxhom_GCG.metric -rw-r--r-- root/root 3902 2024-12-18 16:26 ./usr/share/librg-utils-perl/mat/Maxhom_McLachlan.metric -rw-r--r-- root/root 3726 2024-12-18 16:26 ./usr/share/librg-utils-perl/mat/Maxhom_Sec_Struc.metric -rw-r--r-- root/root 21174 2024-12-18 16:26 ./usr/share/librg-utils-perl/mat/Maxhom_Struc_IO.metric -rwxr-xr-x root/root 20165 2024-12-18 16:26 ./usr/share/librg-utils-perl/safFilterRed.pl drwxr-xr-x root/root 0 2024-12-18 16:26 ./usr/share/man/ drwxr-xr-x root/root 0 2024-12-18 16:26 ./usr/share/man/man1/ -rw-r--r-- root/root 1536 2024-12-18 16:26 ./usr/share/man/man1/dbSwiss.1.gz drwxr-xr-x root/root 0 2024-12-18 16:26 ./usr/share/man/man3/ -rw-r--r-- root/root 1193 2024-12-18 16:26 ./usr/share/man/man3/RG::Utils::Conv_hssp2saf.3pm.gz -rw-r--r-- root/root 2068 2024-12-18 16:26 ./usr/share/man/man3/RG::Utils::Copf.3pm.gz -rw-r--r-- root/root 1482 2024-12-18 16:26 ./usr/share/man/man3/RG::Utils::Hssp_filter.3pm.gz drwxr-xr-x root/root 0 2024-12-18 16:26 ./usr/share/perl5/ drwxr-xr-x root/root 0 2024-12-18 16:26 ./usr/share/perl5/RG/ drwxr-xr-x root/root 0 2024-12-18 16:26 ./usr/share/perl5/RG/Utils/ -rw-r--r-- root/root 48283 2024-12-18 16:26 ./usr/share/perl5/RG/Utils/Conv_hssp2saf.pm -rw-r--r-- root/root 374759 2024-12-18 16:26 ./usr/share/perl5/RG/Utils/Copf.pm -rw-r--r-- root/root 137018 2024-12-18 16:26 ./usr/share/perl5/RG/Utils/Hssp_filter.pm +------------------------------------------------------------------------------+ | Post Build Tue, 21 Jan 2025 18:19:13 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Tue, 21 Jan 2025 18:19:13 +0000 | +------------------------------------------------------------------------------+ Purging /build/librg-utils-perl-kdj3XB Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Tue, 21 Jan 2025 18:19:14 +0000 | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: full Build-Space: 4128 Build-Time: 11 Distribution: perl-5.40-throwaway Host Architecture: amd64 Install-Time: 4 Job: /srv/debomatic/incoming/librg-utils-perl_1.0.43-9.dsc Machine Architecture: amd64 Package: librg-utils-perl Package-Time: 28 Source-Version: 1.0.43-9 Space: 4128 Status: successful Version: 1.0.43-9 -------------------------------------------------------------------------------- Finished at 2025-01-21T18:19:13Z Build needed 00:00:28, 4128k disk space