sbuild (Debian sbuild) 0.85.10 (30 May 2024) on carme.larted.org.uk +==============================================================================+ | libbio-db-seqfeature-perl 1.7.5-1 (amd64) Fri, 11 Oct 2024 16:02:28 +0000 | +==============================================================================+ Package: libbio-db-seqfeature-perl Version: 1.7.5-1 Source Version: 1.7.5-1 Distribution: perl-5.40-throwaway Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: full I: NOTICE: Log filtering will replace 'var/run/schroot/mount/perl-5.40-amd64-debomatic-ea15c7b7-c6a8-4f60-950e-d037fe440080' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup libbio-db-seqfeature-perl_1.7.5-1 perl-5.40-throwaway amd64 ---------------------------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup libbio-db-seqfeature-perl_1.7.5-1 perl-5.40-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- I: NOTICE: Log filtering will replace 'build/libbio-db-seqfeature-perl-39nMis/resolver-YmuGlg' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 file:/srv/reprepro perl-5.40 InRelease [3042 B] Get:1 file:/srv/reprepro perl-5.40 InRelease [3042 B] Hit:2 http://deb.debian.org/debian unstable InRelease Hit:3 http://localhost:3142/debian sid InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- /srv/debomatic/incoming/libbio-db-seqfeature-perl_1.7.5-1.dsc exists in /srv/debomatic/incoming; copying to chroot I: NOTICE: Log filtering will replace 'build/libbio-db-seqfeature-perl-39nMis/libbio-db-seqfeature-perl-1.7.5' with '<>' I: NOTICE: Log filtering will replace 'build/libbio-db-seqfeature-perl-39nMis' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), build-essential, fakeroot, libbio-perl-perl, libbio-db-gff-perl, libdbd-pg-perl, libdbd-sqlite3-perl, libdbi-perl, perl, libtest-most-perl Filtered Build-Depends: debhelper-compat (= 13), build-essential, fakeroot, libbio-perl-perl, libbio-db-gff-perl, libdbd-pg-perl, libdbd-sqlite3-perl, libdbi-perl, perl, libtest-most-perl dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [750 B] Get:5 copy:/<>/apt_archive ./ Packages [762 B] Fetched 2121 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: apache2-bin autoconf automake autopoint autotools-dev bsdextrautils ca-certificates debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file gettext gettext-base groff-base intltool-debian libalgorithm-diff-perl libapache-dbi-perl libapache2-mod-perl2 libapr1t64 libaprutil1-dbd-sqlite3 libaprutil1-ldap libaprutil1t64 libarchive-zip-perl libbio-db-biofetch-perl libbio-db-gff-perl libbio-perl-perl libbrotli1 libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclone-perl libcom-err2 libcurl4t64 libdata-stag-perl libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libdebhelper-perl libdevel-stacktrace-perl libdevel-symdump-perl libelf1t64 libencode-locale-perl libexception-class-perl libexpat1 libfakeroot libfile-listing-perl libfile-stripnondeterminism-perl libgssapi-krb5-2 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu72 libio-html-perl libio-socket-ssl-perl libio-string-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblua5.4-0 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1t64 libnet-http-perl libnet-ssleay-perl libnghttp2-14 libpipeline1 libpq5 libpsl5t64 librtmp1 libssh2-1t64 libsub-uplevel-perl libtest-deep-perl libtest-differences-perl libtest-exception-perl libtest-most-perl libtest-warn-perl libtext-diff-perl libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libwww-perl libwww-robotrules-perl libxml2 m4 man-db netbase openssl perl-openssl-defaults po-debconf sensible-utils Suggested packages: apache2-doc apache2-suexec-pristine | apache2-suexec-custom www-browser autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff bioperl libxml-sax-expatxs-perl libmldbm-perl libnet-daemon-perl libsql-statement-perl krb5-doc krb5-user libdata-dump-perl libcrypt-ssleay-perl libtool-doc gfortran | fortran95-compiler gcj-jdk libsub-name-perl libbusiness-isbn-perl libmime-base32-perl libregexp-ipv6-perl libauthen-ntlm-perl m4-doc apparmor less libmail-box-perl Recommended packages: curl | wget | lynx libalgorithm-diff-xs-perl libapache2-reload-perl libbsd-resource-perl bioperl-run | libbio-perl-run-perl libace-perl libalgorithm-munkres-perl libarray-compare-perl libbio-asn1-entrezgene-perl libconvert-binary-c-perl libdbd-mysql-perl libgd-perl libgraph-perl libgraphviz-perl libhtml-tableextract-perl liblist-moreutils-perl libpostscript-perl libset-scalar-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-perl libsvg-graph-perl libxml-dom-xpath-perl libxml-parser-perl libxml-sax-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl libxml-writer-perl libxml-libxml-perl libcgi-fast-perl perl-tk libgd-gd2-perl | libgd-gd2-noxpm-perl libxml-libxslt-perl libmldbm-perl libxml-perl libarchive-cpio-perl libhtml-format-perl libio-compress-brotli-perl krb5-locales publicsuffix libltdl-dev libdata-dump-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl libmail-sendmail-perl The following NEW packages will be installed: apache2-bin autoconf automake autopoint autotools-dev bsdextrautils ca-certificates debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file gettext gettext-base groff-base intltool-debian libalgorithm-diff-perl libapache-dbi-perl libapache2-mod-perl2 libapr1t64 libaprutil1-dbd-sqlite3 libaprutil1-ldap libaprutil1t64 libarchive-zip-perl libbio-db-biofetch-perl libbio-db-gff-perl libbio-perl-perl libbrotli1 libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclone-perl libcom-err2 libcurl4t64 libdata-stag-perl libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libdebhelper-perl libdevel-stacktrace-perl libdevel-symdump-perl libelf1t64 libencode-locale-perl libexception-class-perl libexpat1 libfakeroot libfile-listing-perl libfile-stripnondeterminism-perl libgssapi-krb5-2 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu72 libio-html-perl libio-socket-ssl-perl libio-string-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblua5.4-0 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1t64 libnet-http-perl libnet-ssleay-perl libnghttp2-14 libpipeline1 libpq5 libpsl5t64 librtmp1 libssh2-1t64 libsub-uplevel-perl libtest-deep-perl libtest-differences-perl libtest-exception-perl libtest-most-perl libtest-warn-perl libtext-diff-perl libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libwww-perl libwww-robotrules-perl libxml2 m4 man-db netbase openssl perl-openssl-defaults po-debconf sbuild-build-depends-main-dummy sensible-utils 0 upgraded, 101 newly installed, 0 to remove and 0 not upgraded. Need to get 30.0 MB/32.7 MB of archives. After this operation, 115 MB of additional disk space will be used. Get:1 file:/srv/reprepro perl-5.40/main amd64 libhtml-parser-perl amd64 3.83-1+b1 [99.7 kB] Get:2 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [928 B] Get:3 file:/srv/reprepro perl-5.40/main amd64 libclone-perl amd64 0.47-1+b1 [13.8 kB] Get:4 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get:5 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:6 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.3.2-1 [1381 kB] Get:7 file:/srv/reprepro perl-5.40/main amd64 libnet-ssleay-perl amd64 1.94-1+b2 [339 kB] Get:8 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get:9 file:/srv/reprepro perl-5.40/main amd64 libapache2-mod-perl2 amd64 2.0.13-2+b1 [810 kB] Get:10 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get:11 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get:12 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3 [42.9 kB] Get:13 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get:14 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get:15 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get:16 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-9 [97.2 kB] Get:17 file:/srv/reprepro perl-5.40/main amd64 libdbi-perl amd64 1.645-1+b1 [861 kB] Get:18 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:19 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get:20 file:/srv/reprepro perl-5.40/main amd64 libpq5 amd64 17.0-1+b1 [220 kB] Get:21 file:/srv/reprepro perl-5.40/main amd64 libdbd-pg-perl amd64 3.18.0-1+b3 [210 kB] Get:22 http://deb.debian.org/debian unstable/main amd64 libapr1t64 amd64 1.7.5-1 [104 kB] Get:23 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.3-1 [105 kB] Get:24 http://deb.debian.org/debian unstable/main amd64 libaprutil1t64 amd64 1.6.3-3 [89.3 kB] Get:25 http://deb.debian.org/debian unstable/main amd64 libaprutil1-dbd-sqlite3 amd64 1.6.3-3 [13.9 kB] Get:26 file:/srv/reprepro perl-5.40/main amd64 libdbd-sqlite3-perl amd64 1.74-1+b3 [176 kB] Get:27 http://deb.debian.org/debian unstable/main amd64 libaprutil1-ldap amd64 1.6.3-3 [12.1 kB] Get:28 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b4 [300 kB] Get:29 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get:30 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1 [22.9 kB] Get:31 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get:32 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get:33 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get:34 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get:35 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.63.0-1 [74.8 kB] Get:36 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get:37 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get:38 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.0-7 [216 kB] Get:39 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.10.1-2 [352 kB] Get:40 http://deb.debian.org/debian unstable/main amd64 liblua5.4-0 amd64 5.4.6-3+b1 [147 kB] Get:41 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5 [9396 kB] Get:42 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.1 [699 kB] Get:43 http://deb.debian.org/debian unstable/main amd64 apache2-bin amd64 2.4.62-3 [1394 kB] Get:44 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get:45 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get:46 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:47 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:48 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get:49 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get:50 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-7 [517 kB] Get:51 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:52 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:53 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get:54 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get:55 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.191-2 [188 kB] Get:56 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:57 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get:58 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:59 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:60 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get:61 http://deb.debian.org/debian unstable/main amd64 libfakeroot amd64 1.36-1 [29.1 kB] Get:62 http://deb.debian.org/debian unstable/main amd64 fakeroot amd64 1.36-1 [75.1 kB] Get:63 http://deb.debian.org/debian unstable/main amd64 libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get:64 http://deb.debian.org/debian unstable/main amd64 libdevel-symdump-perl all 2.18-5 [15.8 kB] Get:65 http://deb.debian.org/debian unstable/main amd64 liburi-perl all 5.30-1 [105 kB] Get:66 http://deb.debian.org/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:67 http://deb.debian.org/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:68 http://deb.debian.org/debian unstable/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:69 http://deb.debian.org/debian unstable/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:70 http://deb.debian.org/debian unstable/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:71 http://deb.debian.org/debian unstable/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:72 http://deb.debian.org/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:73 http://deb.debian.org/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:74 http://deb.debian.org/debian unstable/main amd64 libhttp-message-perl all 7.00-2 [79.8 kB] Get:75 http://deb.debian.org/debian unstable/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:76 http://deb.debian.org/debian unstable/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:77 http://deb.debian.org/debian unstable/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get:78 http://deb.debian.org/debian unstable/main amd64 libio-socket-ssl-perl all 2.089-1 [223 kB] Get:79 http://deb.debian.org/debian unstable/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:80 http://deb.debian.org/debian unstable/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get:81 http://deb.debian.org/debian unstable/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get:82 http://deb.debian.org/debian unstable/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:83 http://deb.debian.org/debian unstable/main amd64 libwww-perl all 6.77-1 [183 kB] Get:84 http://deb.debian.org/debian unstable/main amd64 libapache-dbi-perl all 1.12-3 [48.5 kB] Get:85 http://deb.debian.org/debian unstable/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:86 http://deb.debian.org/debian unstable/main amd64 libdata-stag-perl all 0.14-3 [448 kB] Get:87 http://deb.debian.org/debian unstable/main amd64 libbio-perl-perl all 1.7.8-1 [2603 kB] Get:88 http://deb.debian.org/debian unstable/main amd64 libbio-db-biofetch-perl all 1.7.3-4 [17.5 kB] Get:89 http://deb.debian.org/debian unstable/main amd64 libcgi-pm-perl all 4.66-1 [217 kB] Get:90 http://deb.debian.org/debian unstable/main amd64 libbio-db-gff-perl all 1.7.4-1 [273 kB] Get:91 http://deb.debian.org/debian unstable/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:92 http://deb.debian.org/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:93 http://deb.debian.org/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:94 http://deb.debian.org/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:95 http://deb.debian.org/debian unstable/main amd64 libsub-uplevel-perl all 0.2800-3 [14.0 kB] Get:96 http://deb.debian.org/debian unstable/main amd64 libtest-deep-perl all 1.204-1 [52.9 kB] Get:97 http://deb.debian.org/debian unstable/main amd64 libtext-diff-perl all 1.45-2 [27.2 kB] Get:98 http://deb.debian.org/debian unstable/main amd64 libtest-differences-perl all 0.71-1 [17.9 kB] Get:99 http://deb.debian.org/debian unstable/main amd64 libtest-exception-perl all 0.43-3 [16.9 kB] Get:100 http://deb.debian.org/debian unstable/main amd64 libtest-warn-perl all 0.37-2 [14.5 kB] Get:101 http://deb.debian.org/debian unstable/main amd64 libtest-most-perl all 0.38-1 [25.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 30.0 MB in 11s (2761 kB/s) Selecting previously unselected package netbase. (Reading database ... 22991 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.3.2-1_amd64.deb ... Unpacking openssl (3.3.2-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.45-3_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../005-libmagic1t64_1%3a5.45-3_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../006-file_1%3a5.45-3_amd64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../007-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../008-libuchardet0_0.0.8-1+b1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../009-groff-base_1.23.0-5_amd64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../010-bsdextrautils_2.40.2-9_amd64.deb ... Unpacking bsdextrautils (2.40.2-9) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../011-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../012-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package libapr1t64:amd64. Preparing to unpack .../013-libapr1t64_1.7.5-1_amd64.deb ... Unpacking libapr1t64:amd64 (1.7.5-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../014-libexpat1_2.6.3-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.3-1) ... Selecting previously unselected package libaprutil1t64:amd64. Preparing to unpack .../015-libaprutil1t64_1.6.3-3_amd64.deb ... Unpacking libaprutil1t64:amd64 (1.6.3-3) ... Selecting previously unselected package libaprutil1-dbd-sqlite3:amd64. Preparing to unpack .../016-libaprutil1-dbd-sqlite3_1.6.3-3_amd64.deb ... Unpacking libaprutil1-dbd-sqlite3:amd64 (1.6.3-3) ... Selecting previously unselected package libaprutil1-ldap:amd64. Preparing to unpack .../017-libaprutil1-ldap_1.6.3-3_amd64.deb ... Unpacking libaprutil1-ldap:amd64 (1.6.3-3) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../018-libbrotli1_1.1.0-2+b4_amd64.deb ... Unpacking libbrotli1:amd64 (1.1.0-2+b4) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../019-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../020-libcom-err2_1.47.1-1_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.1-1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../021-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../022-libkeyutils1_1.6.3-3_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-3) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../023-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../024-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../025-libnghttp2-14_1.63.0-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.63.0-1) ... Selecting previously unselected package libpsl5t64:amd64. Preparing to unpack .../026-libpsl5t64_0.21.2-1.1_amd64.deb ... Unpacking libpsl5t64:amd64 (0.21.2-1.1) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../027-librtmp1_2.4+20151223.gitfa8646d.1-2+b4_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Selecting previously unselected package libssh2-1t64:amd64. Preparing to unpack .../028-libssh2-1t64_1.11.0-7_amd64.deb ... Unpacking libssh2-1t64:amd64 (1.11.0-7) ... Selecting previously unselected package libcurl4t64:amd64. Preparing to unpack .../029-libcurl4t64_8.10.1-2_amd64.deb ... Unpacking libcurl4t64:amd64 (8.10.1-2) ... Selecting previously unselected package liblua5.4-0:amd64. Preparing to unpack .../030-liblua5.4-0_5.4.6-3+b1_amd64.deb ... Unpacking liblua5.4-0:amd64 (5.4.6-3+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../031-libicu72_72.1-5_amd64.deb ... Unpacking libicu72:amd64 (72.1-5) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../032-libxml2_2.12.7+dfsg+really2.9.14-0.1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Selecting previously unselected package apache2-bin. Preparing to unpack .../033-apache2-bin_2.4.62-3_amd64.deb ... Unpacking apache2-bin (2.4.62-3) ... Selecting previously unselected package m4. Preparing to unpack .../034-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../035-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../036-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../037-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../038-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../039-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../040-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../041-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../042-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../043-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../044-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../045-libelf1t64_0.191-2_amd64.deb ... Unpacking libelf1t64:amd64 (0.191-2) ... Selecting previously unselected package dwz. Preparing to unpack .../046-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../047-gettext_0.22.5-2_amd64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../048-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../049-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../050-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package libfakeroot:amd64. Preparing to unpack .../051-libfakeroot_1.36-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.36-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../052-fakeroot_1.36-1_amd64.deb ... Unpacking fakeroot (1.36-1) ... Selecting previously unselected package libalgorithm-diff-perl. Preparing to unpack .../053-libalgorithm-diff-perl_1.201-1_all.deb ... Unpacking libalgorithm-diff-perl (1.201-1) ... Selecting previously unselected package libdevel-symdump-perl. Preparing to unpack .../054-libdevel-symdump-perl_2.18-5_all.deb ... Unpacking libdevel-symdump-perl (2.18-5) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../055-liburi-perl_5.30-1_all.deb ... Unpacking liburi-perl (5.30-1) ... Selecting previously unselected package libencode-locale-perl. Preparing to unpack .../056-libencode-locale-perl_1.05-3_all.deb ... Unpacking libencode-locale-perl (1.05-3) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../057-libtimedate-perl_2.3300-2_all.deb ... Unpacking libtimedate-perl (2.3300-2) ... Selecting previously unselected package libhttp-date-perl. Preparing to unpack .../058-libhttp-date-perl_6.06-1_all.deb ... Unpacking libhttp-date-perl (6.06-1) ... Selecting previously unselected package libfile-listing-perl. Preparing to unpack .../059-libfile-listing-perl_6.16-1_all.deb ... Unpacking libfile-listing-perl (6.16-1) ... Selecting previously unselected package libhtml-tagset-perl. Preparing to unpack .../060-libhtml-tagset-perl_3.24-1_all.deb ... Unpacking libhtml-tagset-perl (3.24-1) ... Selecting previously unselected package libhtml-parser-perl:amd64. Preparing to unpack .../061-libhtml-parser-perl_3.83-1+b1_amd64.deb ... Unpacking libhtml-parser-perl:amd64 (3.83-1+b1) ... Selecting previously unselected package libhtml-tree-perl. Preparing to unpack .../062-libhtml-tree-perl_5.07-3_all.deb ... Unpacking libhtml-tree-perl (5.07-3) ... Selecting previously unselected package libclone-perl:amd64. Preparing to unpack .../063-libclone-perl_0.47-1+b1_amd64.deb ... Unpacking libclone-perl:amd64 (0.47-1+b1) ... Selecting previously unselected package libio-html-perl. Preparing to unpack .../064-libio-html-perl_1.004-3_all.deb ... Unpacking libio-html-perl (1.004-3) ... Selecting previously unselected package liblwp-mediatypes-perl. Preparing to unpack .../065-liblwp-mediatypes-perl_6.04-2_all.deb ... Unpacking liblwp-mediatypes-perl (6.04-2) ... Selecting previously unselected package libhttp-message-perl. Preparing to unpack .../066-libhttp-message-perl_7.00-2_all.deb ... Unpacking libhttp-message-perl (7.00-2) ... Selecting previously unselected package libhttp-cookies-perl. Preparing to unpack .../067-libhttp-cookies-perl_6.11-1_all.deb ... Unpacking libhttp-cookies-perl (6.11-1) ... Selecting previously unselected package libhttp-negotiate-perl. Preparing to unpack .../068-libhttp-negotiate-perl_6.01-2_all.deb ... Unpacking libhttp-negotiate-perl (6.01-2) ... Selecting previously unselected package perl-openssl-defaults:amd64. Preparing to unpack .../069-perl-openssl-defaults_7+b2_amd64.deb ... Unpacking perl-openssl-defaults:amd64 (7+b2) ... Selecting previously unselected package libnet-ssleay-perl:amd64. Preparing to unpack .../070-libnet-ssleay-perl_1.94-1+b2_amd64.deb ... Unpacking libnet-ssleay-perl:amd64 (1.94-1+b2) ... Selecting previously unselected package libio-socket-ssl-perl. Preparing to unpack .../071-libio-socket-ssl-perl_2.089-1_all.deb ... Unpacking libio-socket-ssl-perl (2.089-1) ... Selecting previously unselected package libnet-http-perl. Preparing to unpack .../072-libnet-http-perl_6.23-1_all.deb ... Unpacking libnet-http-perl (6.23-1) ... Selecting previously unselected package liblwp-protocol-https-perl. Preparing to unpack .../073-liblwp-protocol-https-perl_6.14-1_all.deb ... Unpacking liblwp-protocol-https-perl (6.14-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../074-libtry-tiny-perl_0.32-1_all.deb ... Unpacking libtry-tiny-perl (0.32-1) ... Selecting previously unselected package libwww-robotrules-perl. Preparing to unpack .../075-libwww-robotrules-perl_6.02-1_all.deb ... Unpacking libwww-robotrules-perl (6.02-1) ... Selecting previously unselected package libwww-perl. Preparing to unpack .../076-libwww-perl_6.77-1_all.deb ... Unpacking libwww-perl (6.77-1) ... Selecting previously unselected package libapache2-mod-perl2. Preparing to unpack .../077-libapache2-mod-perl2_2.0.13-2+b1_amd64.deb ... Unpacking libapache2-mod-perl2 (2.0.13-2+b1) ... Selecting previously unselected package libdbi-perl:amd64. Preparing to unpack .../078-libdbi-perl_1.645-1+b1_amd64.deb ... Unpacking libdbi-perl:amd64 (1.645-1+b1) ... Selecting previously unselected package libapache-dbi-perl. Preparing to unpack .../079-libapache-dbi-perl_1.12-3_all.deb ... Unpacking libapache-dbi-perl (1.12-3) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../080-libio-string-perl_1.08-4_all.deb ... Unpacking libio-string-perl (1.08-4) ... Selecting previously unselected package libdata-stag-perl. Preparing to unpack .../081-libdata-stag-perl_0.14-3_all.deb ... Unpacking libdata-stag-perl (0.14-3) ... Selecting previously unselected package libbio-perl-perl. Preparing to unpack .../082-libbio-perl-perl_1.7.8-1_all.deb ... Unpacking libbio-perl-perl (1.7.8-1) ... Selecting previously unselected package libbio-db-biofetch-perl. Preparing to unpack .../083-libbio-db-biofetch-perl_1.7.3-4_all.deb ... Unpacking libbio-db-biofetch-perl (1.7.3-4) ... Selecting previously unselected package libcgi-pm-perl. Preparing to unpack .../084-libcgi-pm-perl_4.66-1_all.deb ... Unpacking libcgi-pm-perl (4.66-1) ... Selecting previously unselected package libbio-db-gff-perl. Preparing to unpack .../085-libbio-db-gff-perl_1.7.4-1_all.deb ... Unpacking libbio-db-gff-perl (1.7.4-1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../086-libcapture-tiny-perl_0.48-2_all.deb ... Unpacking libcapture-tiny-perl (0.48-2) ... Selecting previously unselected package libclass-data-inheritable-perl. Preparing to unpack .../087-libclass-data-inheritable-perl_0.08-3_all.deb ... Unpacking libclass-data-inheritable-perl (0.08-3) ... Selecting previously unselected package libpq5:amd64. Preparing to unpack .../088-libpq5_17.0-1+b1_amd64.deb ... Unpacking libpq5:amd64 (17.0-1+b1) ... Selecting previously unselected package libdbd-pg-perl. Preparing to unpack .../089-libdbd-pg-perl_3.18.0-1+b3_amd64.deb ... Unpacking libdbd-pg-perl (3.18.0-1+b3) ... Selecting previously unselected package libdbd-sqlite3-perl:amd64. Preparing to unpack .../090-libdbd-sqlite3-perl_1.74-1+b3_amd64.deb ... Unpacking libdbd-sqlite3-perl:amd64 (1.74-1+b3) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../091-libdevel-stacktrace-perl_2.0500-1_all.deb ... Unpacking libdevel-stacktrace-perl (2.0500-1) ... Selecting previously unselected package libexception-class-perl. Preparing to unpack .../092-libexception-class-perl_1.45-1_all.deb ... Unpacking libexception-class-perl (1.45-1) ... Selecting previously unselected package libsub-uplevel-perl. Preparing to unpack .../093-libsub-uplevel-perl_0.2800-3_all.deb ... Unpacking libsub-uplevel-perl (0.2800-3) ... Selecting previously unselected package libtest-deep-perl. Preparing to unpack .../094-libtest-deep-perl_1.204-1_all.deb ... Unpacking libtest-deep-perl (1.204-1) ... Selecting previously unselected package libtext-diff-perl. Preparing to unpack .../095-libtext-diff-perl_1.45-2_all.deb ... Unpacking libtext-diff-perl (1.45-2) ... Selecting previously unselected package libtest-differences-perl. Preparing to unpack .../096-libtest-differences-perl_0.71-1_all.deb ... Unpacking libtest-differences-perl (0.71-1) ... Selecting previously unselected package libtest-exception-perl. Preparing to unpack .../097-libtest-exception-perl_0.43-3_all.deb ... Unpacking libtest-exception-perl (0.43-3) ... Selecting previously unselected package libtest-warn-perl. Preparing to unpack .../098-libtest-warn-perl_0.37-2_all.deb ... Unpacking libtest-warn-perl (0.37-2) ... Selecting previously unselected package libtest-most-perl. Preparing to unpack .../099-libtest-most-perl_0.38-1_all.deb ... Unpacking libtest-most-perl (0.38-1) ... Selecting previously unselected package sbuild-build-depends-main-dummy. Preparing to unpack .../100-sbuild-build-depends-main-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up libexpat1:amd64 (2.6.3-1) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libkeyutils1:amd64 (1.6.3-3) ... Setting up libicu72:amd64 (72.1-5) ... Setting up bsdextrautils (2.40.2-9) ... Setting up libtest-deep-perl (1.204-1) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libclone-perl:amd64 (0.47-1+b1) ... Setting up libalgorithm-diff-perl (1.201-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libbrotli1:amd64 (1.1.0-2+b4) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up libpsl5t64:amd64 (0.21.2-1.1) ... Setting up libnghttp2-14:amd64 (1.63.0-1) ... Setting up perl-openssl-defaults:amd64 (7+b2) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libcom-err2:amd64 (1.47.1-1) ... Setting up file (1:5.45-3) ... Setting up libfakeroot:amd64 (1.36-1) ... Setting up libelf1t64:amd64 (0.191-2) ... Setting up libkrb5support0:amd64 (1.21.3-3) ... Setting up fakeroot (1.36-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libtext-diff-perl (1.45-2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libio-html-perl (1.004-3) ... Setting up autopoint (0.22.5-2) ... Setting up libk5crypto3:amd64 (1.21.3-3) ... Setting up autoconf (2.72-3) ... Setting up libcapture-tiny-perl (0.48-2) ... Setting up libtimedate-perl (2.3300-2) ... Setting up dwz (0.15-1+b1) ... Setting up libdata-stag-perl (0.14-3) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up libapr1t64:amd64 (1.7.5-1) ... Setting up libsub-uplevel-perl (0.2800-3) ... Setting up liblua5.4-0:amd64 (5.4.6-3+b1) ... Setting up netbase (6.4) ... Configuration file '/etc/protocols' ==> File on system created by you or by a script. ==> File also in package provided by package maintainer. ==> Using current old file as you requested. Configuration file '/etc/services' ==> File on system created by you or by a script. ==> File also in package provided by package maintainer. ==> Using current old file as you requested. Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up libdevel-symdump-perl (2.18-5) ... Setting up libbio-perl-perl (1.7.8-1) ... Setting up libssh2-1t64:amd64 (1.11.0-7) ... Setting up openssl (3.3.2-1) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Setting up liburi-perl (5.30-1) ... Setting up libdbi-perl:amd64 (1.645-1+b1) ... Setting up libnet-ssleay-perl:amd64 (1.94-1+b2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libaprutil1t64:amd64 (1.6.3-3) ... Setting up libhttp-date-perl (6.06-1) ... Setting up gettext (0.22.5-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libtool (2.4.7-7) ... Setting up libtest-warn-perl (0.37-2) ... Setting up libtest-differences-perl (0.71-1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libaprutil1-ldap:amd64 (1.6.3-3) ... Setting up libaprutil1-dbd-sqlite3:amd64 (1.6.3-3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libtest-exception-perl (0.43-3) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up groff-base (1.23.0-5) ... Setting up libhtml-parser-perl:amd64 (3.83-1+b1) ... Setting up libdbd-sqlite3-perl:amd64 (1.74-1+b3) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libcurl4t64:amd64 (8.10.1-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libtest-most-perl (0.38-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libcgi-pm-perl (4.66-1) ... Setting up libpq5:amd64 (17.0-1+b1) ... Setting up libdbd-pg-perl (3.18.0-1+b3) ... Setting up apache2-bin (2.4.62-3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libwww-perl (6.77-1) ... Setting up libapache2-mod-perl2 (2.0.13-2+b1) ... Setting up libbio-db-biofetch-perl (1.7.3-4) ... Setting up libapache-dbi-perl (1.12-3) ... Setting up libbio-db-gff-perl (1.7.4-1) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.9.7-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.9.7-1 (2024-06-27) amd64 (x86_64) Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.11 g++-13_13.3.0-8 g++-14_14.2.0-6 gcc-13_13.3.0-8 gcc-14_14.2.0-6 libc6-dev_2.40-3 libstdc++-13-dev_13.3.0-8 libstdc++-14-dev_14.2.0-6 libstdc++6_14.2.0-6 linux-libc-dev_6.11.2-1 Package versions: adduser_3.137 apache2-bin_2.4.62-3 apt_2.9.8 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 autotools-dev_20220109.1 base-files_13.5 base-passwd_3.6.4 bash_5.2.32-1+b1 binutils_2.43.1-5 binutils-common_2.43.1-5 binutils-x86-64-linux-gnu_2.43.1-5 bsdextrautils_2.40.2-9 bsdutils_1:2.40.2-9 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20240203 coreutils_9.4-3.1 cpp_4:14.2.0-1 cpp-13_13.3.0-8 cpp-13-x86-64-linux-gnu_13.3.0-8 cpp-14_14.2.0-6 cpp-14-x86-64-linux-gnu_14.2.0-6 cpp-x86-64-linux-gnu_4:14.2.0-1 dash_0.5.12-9 debconf_1.5.87 debhelper_13.20 debian-archive-keyring_2023.4 debianutils_5.20 dh-autoreconf_20 dh-strip-nondeterminism_1.14.0-1 diffutils_1:3.10-1 dirmngr_2.2.44-1 dpkg_1.22.11 dpkg-dev_1.22.11 dwz_0.15-1+b1 eatmydata_131-2 fakeroot_1.36-1 file_1:5.45-3 findutils_4.10.0-3 g++_4:14.2.0-1 g++-13_13.3.0-8 g++-13-x86-64-linux-gnu_13.3.0-8 g++-14_14.2.0-6 g++-14-x86-64-linux-gnu_14.2.0-6 g++-x86-64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-13_13.3.0-8 gcc-13-base_13.3.0-8 gcc-13-x86-64-linux-gnu_13.3.0-8 gcc-14_14.2.0-6 gcc-14-base_14.2.0-6 gcc-14-x86-64-linux-gnu_14.2.0-6 gcc-x86-64-linux-gnu_4:14.2.0-1 gettext_0.22.5-2 gettext-base_0.22.5-2 gnupg_2.2.44-1 gnupg-l10n_2.2.44-1 gnupg-utils_2.2.44-1 gpg_2.2.44-1 gpg-agent_2.2.44-1 gpg-wks-client_2.2.44-1 gpgconf_2.2.44-1 gpgsm_2.2.44-1 gpgv_2.2.44-1 grep_3.11-4 groff-base_1.23.0-5 gzip_1.12-1.1 hostname_3.25 init-system-helpers_1.67 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2 libalgorithm-diff-perl_1.201-1 libapache-dbi-perl_1.12-3 libapache2-mod-perl2_2.0.13-2+b1 libapr1t64_1.7.5-1 libaprutil1-dbd-sqlite3_1.6.3-3 libaprutil1-ldap_1.6.3-3 libaprutil1t64_1.6.3-3 libapt-pkg6.0t64_2.9.8 libarchive-zip-perl_1.68-1 libasan8_14.2.0-6 libassuan0_2.5.6-1+b1 libassuan9_3.0.1-2 libatomic1_14.2.0-6 libattr1_1:2.5.2-1 libaudit-common_1:4.0.1-1 libaudit1_1:4.0.1-1 libbinutils_2.43.1-5 libbio-db-biofetch-perl_1.7.3-4 libbio-db-gff-perl_1.7.4-1 libbio-perl-perl_1.7.8-1 libblkid1_2.40.2-9 libbrotli1_1.1.0-2+b4 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libc-bin_2.40-3 libc-dev-bin_2.40-3 libc-l10n_2.40-3 libc6_2.40-3 libc6-dev_2.40-3 libcap-ng0_0.8.5-2 libcap2_1:2.66-5 libcapture-tiny-perl_0.48-2 libcc1-0_14.2.0-6 libcgi-pm-perl_4.66-1 libclass-data-inheritable-perl_0.08-3 libclone-perl_0.47-1+b1 libcom-err2_1.47.1-1 libcrypt-dev_1:4.4.36-5 libcrypt1_1:4.4.36-5 libctf-nobfd0_2.43.1-5 libctf0_2.43.1-5 libcurl4t64_8.10.1-2 libdata-stag-perl_0.14-3 libdb5.3t64_5.3.28+dfsg2-8 libdbd-pg-perl_3.18.0-1+b3 libdbd-sqlite3-perl_1.74-1+b3 libdbi-perl_1.645-1+b1 libdebconfclient0_0.272 libdebhelper-perl_13.20 libdevel-stacktrace-perl_2.0500-1 libdevel-symdump-perl_2.18-5 libdpkg-perl_1.22.11 libeatmydata1_131-2 libelf1t64_0.191-2 libencode-locale-perl_1.05-3 libexception-class-perl_1.45-1 libexpat1_2.6.3-1 libfakeroot_1.36-1 libffi8_3.4.6-1 libfile-listing-perl_6.16-1 libfile-stripnondeterminism-perl_1.14.0-1 libgcc-13-dev_13.3.0-8 libgcc-14-dev_14.2.0-6 libgcc-s1_14.2.0-6 libgcrypt20_1.11.0-6 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgmp10_2:6.3.0+dfsg-2+b1 libgnutls30t64_3.8.6-2 libgomp1_14.2.0-6 libgpg-error0_1.50-4 libgprofng0_2.43.1-5 libgssapi-krb5-2_1.21.3-3 libhogweed6t64_3.10-1 libhtml-parser-perl_3.83-1+b1 libhtml-tagset-perl_3.24-1 libhtml-tree-perl_5.07-3 libhttp-cookies-perl_6.11-1 libhttp-date-perl_6.06-1 libhttp-message-perl_7.00-2 libhttp-negotiate-perl_6.01-2 libhwasan0_14.2.0-6 libicu72_72.1-5 libidn2-0_2.3.7-2 libio-html-perl_1.004-3 libio-socket-ssl-perl_2.089-1 libio-string-perl_1.08-4 libisl23_0.27-1 libitm1_14.2.0-6 libjansson4_2.14-2+b2 libk5crypto3_1.21.3-3 libkeyutils1_1.6.3-3 libkrb5-3_1.21.3-3 libkrb5support0_1.21.3-3 libksba8_1.6.7-2 libldap-2.5-0_2.5.18+dfsg-3+b1 liblsan0_14.2.0-6 liblua5.4-0_5.4.6-3+b1 liblwp-mediatypes-perl_6.04-2 liblwp-protocol-https-perl_6.14-1 liblz4-1_1.9.4-3 liblzma5_5.6.2-2 libmagic-mgc_1:5.45-3 libmagic1t64_1:5.45-3 libmd0_1.1.0-2 libmount1_2.40.2-9 libmpc3_1.3.1-1+b2 libmpfr6_4.2.1-1+b1 libncursesw6_6.5-2 libnet-http-perl_6.23-1 libnet-ssleay-perl_1.94-1+b2 libnettle8t64_3.10-1 libnghttp2-14_1.63.0-1 libnpth0t64_1.6-3.1 libp11-kit0_0.25.5-2 libpam-modules_1.5.3-7 libpam-modules-bin_1.5.3-7 libpam-runtime_1.5.3-7 libpam0g_1.5.3-7 libpcre2-8-0_10.42-4+b1 libperl5.38t64_5.38.2-5 libperl5.40_5.40.0-5 libpipeline1_1.5.8-1 libpq5_17.0-1+b1 libpsl5t64_0.21.2-1.1 libquadmath0_14.2.0-6 libreadline8t64_8.2-5 librtmp1_2.4+20151223.gitfa8646d.1-2+b4 libsasl2-2_2.1.28+dfsg1-8 libsasl2-modules-db_2.1.28+dfsg1-8 libseccomp2_2.5.5-1+b1 libselinux1_3.7-3 libsemanage-common_3.7-2 libsemanage2_3.7-2 libsepol2_3.7-1 libsframe1_2.43.1-5 libsmartcols1_2.40.2-9 libsqlite3-0_3.46.1-1 libssh2-1t64_1.11.0-7 libssl3t64_3.3.2-1 libstdc++-13-dev_13.3.0-8 libstdc++-14-dev_14.2.0-6 libstdc++6_14.2.0-6 libsub-uplevel-perl_0.2800-3 libsystemd0_256.7-1 libtasn1-6_4.19.0-3+b2 libtest-deep-perl_1.204-1 libtest-differences-perl_0.71-1 libtest-exception-perl_0.43-3 libtest-most-perl_0.38-1 libtest-warn-perl_0.37-2 libtext-diff-perl_1.45-2 libtimedate-perl_2.3300-2 libtinfo6_6.5-2 libtool_2.4.7-7 libtry-tiny-perl_0.32-1 libtsan2_14.2.0-6 libubsan1_14.2.0-6 libuchardet0_0.0.8-1+b1 libudev1_256.7-1 libunistring5_1.2-1 liburi-perl_5.30-1 libuuid1_2.40.2-9 libwww-perl_6.77-1 libwww-robotrules-perl_6.02-1 libxml2_2.12.7+dfsg+really2.9.14-0.1 libxxhash0_0.8.2-2+b1 libzstd1_1.5.6+dfsg-1 linux-libc-dev_6.11.2-1 locales-all_2.40-3 login_1:4.16.0-2+really2.40.2-9 login.defs_1:4.16.0-4 m4_1.4.19-4 make_4.3-4.1 man-db_2.13.0-1 mawk_1.3.4.20240905-1 ncurses-base_6.5-2 ncurses-bin_6.5-2 netbase_6.4 openssl_3.3.2-1 openssl-provider-legacy_3.3.2-1 passwd_1:4.16.0-4 patch_2.7.6-7 perl_5.40.0-5 perl-base_5.40.0-5 perl-modules-5.38_5.38.2-5 perl-modules-5.40_5.40.0-5 perl-openssl-defaults_7+b2 pinentry-curses_1.2.1-4+b1 po-debconf_1.0.21+nmu1 readline-common_8.2-5 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.24 sysvinit-utils_3.10-2 tar_1.35+dfsg-3 usr-is-merged_39 util-linux_2.40.2-9 xz-utils_5.6.2-2 zlib1g_1:1.3.dfsg+really1.3.1-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libbio-db-seqfeature-perl Binary: libbio-db-seqfeature-perl Architecture: all Version: 1.7.5-1 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe , Étienne Mollier Homepage: https://metacpan.org/release/Bio-DB-SeqFeature Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/libbio-db-seqfeature-perl Vcs-Git: https://salsa.debian.org/med-team/libbio-db-seqfeature-perl.git Testsuite: autopkgtest-pkg-perl Build-Depends: debhelper-compat (= 13) Build-Depends-Indep: libbio-perl-perl, libbio-db-gff-perl, libdbd-pg-perl, libdbd-sqlite3-perl, libdbi-perl, perl, libtest-most-perl Package-List: libbio-db-seqfeature-perl deb perl optional arch=all Checksums-Sha1: fa9683859235e2e08868e5fd131cdb2f64138e33 274481 libbio-db-seqfeature-perl_1.7.5.orig.tar.gz 2703b137885dfc7da21eecef8cf416e2ee723b43 2312 libbio-db-seqfeature-perl_1.7.5-1.debian.tar.xz Checksums-Sha256: 384b3b416f43df2bf4272abeeac5671310b21e75951be1ddc52daa41794dd2d1 274481 libbio-db-seqfeature-perl_1.7.5.orig.tar.gz 1fcc1e0f369893bf4e21f11fd71a450d810c11a6fbd4c0a91285cd83d1241ab4 2312 libbio-db-seqfeature-perl_1.7.5-1.debian.tar.xz Files: 521c760af1b2e8f095c7a9c5ff0f8381 274481 libbio-db-seqfeature-perl_1.7.5.orig.tar.gz 0a08aeec7efdc74d4dafe427e30b2cd6 2312 libbio-db-seqfeature-perl_1.7.5-1.debian.tar.xz Dgit: 9b039b3477b2e15c05db508282f3604dbec7d9dc debian archive/debian/1.7.5-1 https://git.dgit.debian.org/libbio-db-seqfeature-perl -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmcJBGUUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdod6w/+MU7UDT+cFeRzsf+4QDcI4BQWZgwN MDt46hKSU8fsrVE9SHz2s8DWQrzkg8thkpiGOP4tDnIo7nPvua1zfzG7EacjMcBn OGg3lzWcAY6y5YjTqOhTvh4nSqaOPxRLxEZ9BG+mEAaKAtE4JITSSjCRzWNbxhmq TSVWx605HtT1ndA6S9E7QnLbcuFgYQI4CQ2IB7fziUstarE1XK6lhHxhNdRERamp tR8TNZH2EF2ZvmZe9kVj7kX20jd4meRhK3aU2nkNL22JG+Qg8kAQc6aESRinuJ27 Hpn1yXqU7D6u9f1da8V1PRICQObCTfA/T4D+TQQa3sQyrxsVAikQqnZZNepDqKlY pZ25CDmQeBZS3P7m/KdlSTNL0bvVD8RxnR+LDuyUbwBL0371vk1pyC1T8rCdw7Xd k3OnnDguxi7n8SmZ8QnBP6AwjzxPH5bFNqBd7WIFeCkBY7YJC0UvDd777DPTrQoB 7HVVR+HsgFl+zapQ+0fui6jfcieDtiLMMxwJ/SnztfqNU7Dh1Fv1KCABfwP161j2 6U3WSFLJPr7BlblLmMapL0AmQtazqy2WBNzTS+yOUEMPFhC6eerB52/QJ4QxcVYy 0uFVzeFTZ5LwzNfqvfn66nIv2bEt1svU5gTZnyURRprxHZfdrgTIXzq5Khp5/frO nzmXOknHMnH/1ds= =DCKp -----END PGP SIGNATURE----- gpgv: Signature made Fri Oct 11 10:56:37 2024 UTC gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libbio-db-seqfeature-perl_1.7.5-1.dsc: no acceptable signature found dpkg-source: info: extracting libbio-db-seqfeature-perl in /<> dpkg-source: info: unpacking libbio-db-seqfeature-perl_1.7.5.orig.tar.gz dpkg-source: info: unpacking libbio-db-seqfeature-perl_1.7.5-1.debian.tar.xz Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Timed Build Commands | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/starting-build-commands/no-network libbio-db-seqfeature-perl_1.7.5-1 perl-5.40-throwaway amd64 ---------------------------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/starting-build-commands/no-network libbio-db-seqfeature-perl_1.7.5-1 perl-5.40-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_GB.UTF-8 LANGUAGE=en_GB:en LC_ALL=C.UTF-8 LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so LOGNAME=debomatic PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/<> SCHROOT_ALIAS_NAME=perl-5.40-throwaway-amd64-debomatic SCHROOT_CHROOT_NAME=perl-5.40-amd64-debomatic SCHROOT_COMMAND=env SCHROOT_GID=110 SCHROOT_GROUP=sbuild SCHROOT_SESSION_ID=perl-5.40-amd64-debomatic-ea15c7b7-c6a8-4f60-950e-d037fe440080 SCHROOT_UID=1002 SCHROOT_USER=debomatic SHELL=/bin/sh USER=debomatic dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -Zxz dpkg-buildpackage: info: source package libbio-db-seqfeature-perl dpkg-buildpackage: info: source version 1.7.5-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source -Zxz --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean dpkg-source -Zxz -b . dpkg-source: info: using source format '3.0 (quilt)' dpkg-source: info: building libbio-db-seqfeature-perl using existing ./libbio-db-seqfeature-perl_1.7.5.orig.tar.gz dpkg-source: info: building libbio-db-seqfeature-perl in libbio-db-seqfeature-perl_1.7.5-1.debian.tar.xz dpkg-source: info: building libbio-db-seqfeature-perl in libbio-db-seqfeature-perl_1.7.5-1.dsc debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2" "LD=x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro" Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Bio::DB::SeqFeature Writing MYMETA.yml and MYMETA.json dh_auto_build make -j2 make[1]: Entering directory '/<>' cp lib/Bio/DB/SeqFeature/Store/bdb.pm blib/lib/Bio/DB/SeqFeature/Store/bdb.pm cp lib/Bio/DB/SeqFeature/Store/Loader.pm blib/lib/Bio/DB/SeqFeature/Store/Loader.pm cp lib/Bio/DB/SeqFeature/Store/memory.pm blib/lib/Bio/DB/SeqFeature/Store/memory.pm cp lib/Bio/DB/SeqFeature/Store/berkeleydb.pm blib/lib/Bio/DB/SeqFeature/Store/berkeleydb.pm cp lib/Bio/DB/SeqFeature/Store/DBI/Iterator.pm blib/lib/Bio/DB/SeqFeature/Store/DBI/Iterator.pm cp lib/Bio/DB/SeqFeature/Store.pm blib/lib/Bio/DB/SeqFeature/Store.pm cp lib/Bio/DB/SeqFeature/Store/DBI/Pg.pm blib/lib/Bio/DB/SeqFeature/Store/DBI/Pg.pm cp lib/Bio/DB/SeqFeature/Segment.pm blib/lib/Bio/DB/SeqFeature/Segment.pm cp lib/Bio/DB/SeqFeature/Store/LoadHelper.pm blib/lib/Bio/DB/SeqFeature/Store/LoadHelper.pm cp lib/Bio/DB/SeqFeature/Store/GFF3Loader.pm blib/lib/Bio/DB/SeqFeature/Store/GFF3Loader.pm cp lib/Bio/DB/SeqFeature/Store/FeatureFileLoader.pm blib/lib/Bio/DB/SeqFeature/Store/FeatureFileLoader.pm cp lib/Bio/DB/SeqFeature/Store/DBI/mysql.pm blib/lib/Bio/DB/SeqFeature/Store/DBI/mysql.pm cp lib/Bio/DB/SeqFeature.pm blib/lib/Bio/DB/SeqFeature.pm cp lib/Bio/DB/SeqFeature/Store/DBI/MariaDB.pm blib/lib/Bio/DB/SeqFeature/Store/DBI/MariaDB.pm cp lib/Bio/DB/SeqFeature/Store/DBI/SQLite.pm blib/lib/Bio/DB/SeqFeature/Store/DBI/SQLite.pm cp lib/Bio/DB/SeqFeature/NormalizedFeatureI.pm blib/lib/Bio/DB/SeqFeature/NormalizedFeatureI.pm cp lib/Bio/DB/SeqFeature/Store/GFF2Loader.pm blib/lib/Bio/DB/SeqFeature/Store/GFF2Loader.pm cp lib/Bio/DB/SeqFeature/NormalizedFeature.pm blib/lib/Bio/DB/SeqFeature/NormalizedFeature.pm cp lib/Bio/DB/SeqFeature/Store/berkeleydb3.pm blib/lib/Bio/DB/SeqFeature/Store/berkeleydb3.pm cp lib/Bio/DB/SeqFeature/NormalizedTableFeatureI.pm blib/lib/Bio/DB/SeqFeature/NormalizedTableFeatureI.pm cp bin/bp_seqfeature_delete blib/script/bp_seqfeature_delete "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/bp_seqfeature_delete cp bin/bp_seqfeature_gff3 blib/script/bp_seqfeature_gff3 "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/bp_seqfeature_gff3 cp bin/bp_seqfeature_load blib/script/bp_seqfeature_load "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/bp_seqfeature_load Manifying 1 pod document Manifying 20 pod documents make[1]: Leaving directory '/<>' dh_auto_test make -j2 test TEST_VERBOSE=1 make[1]: Entering directory '/<>' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/00-compile.t ......... 1..21 ok 1 - Bio/DB/SeqFeature.pm loaded ok ok 2 - Bio/DB/SeqFeature/NormalizedFeature.pm loaded ok ok 3 - Bio/DB/SeqFeature/NormalizedFeatureI.pm loaded ok ok 4 - Bio/DB/SeqFeature/NormalizedTableFeatureI.pm loaded ok ok 5 - Bio/DB/SeqFeature/Segment.pm loaded ok ok 6 - Bio/DB/SeqFeature/Store.pm loaded ok ok 7 - Bio/DB/SeqFeature/Store/DBI/Iterator.pm loaded ok ok 8 - Bio/DB/SeqFeature/Store/DBI/MariaDB.pm loaded ok ok 9 - Bio/DB/SeqFeature/Store/DBI/mysql.pm loaded ok ok 10 - Bio/DB/SeqFeature/Store/FeatureFileLoader.pm loaded ok ok 11 - Bio/DB/SeqFeature/Store/GFF2Loader.pm loaded ok ok 12 - Bio/DB/SeqFeature/Store/GFF3Loader.pm loaded ok ok 13 - Bio/DB/SeqFeature/Store/LoadHelper.pm loaded ok ok 14 - Bio/DB/SeqFeature/Store/Loader.pm loaded ok ok 15 - Bio/DB/SeqFeature/Store/bdb.pm loaded ok ok 16 - Bio/DB/SeqFeature/Store/berkeleydb.pm loaded ok ok 17 - Bio/DB/SeqFeature/Store/berkeleydb3.pm loaded ok ok 18 - Bio/DB/SeqFeature/Store/memory.pm loaded ok ok 19 - bin/bp_seqfeature_delete compiled ok ok 20 - bin/bp_seqfeature_gff3 compiled ok ok 21 - bin/bp_seqfeature_load compiled ok ok t/author-mojibake.t .... skipped: these tests are for testing by the author t/author-pod-syntax.t .. skipped: these tests are for testing by the author t/SeqFeature.t ......... 1..116 ok 1 - use Bio::SeqFeature::Generic; ok 2 - use Bio::DB::SeqFeature::Store; ok 3 - use Bio::DB::SeqFeature::Store::GFF3Loader; ok 4 - use Bio::Root::IO; ok 5 - use Bio::DB::Fasta; ok 6 - use File::Copy; ok 7 ok 8 ok 9 ok 10 - adding a feature ok 11 ok 12 ok 13 ok 14 - adding a feature with no primary_id ok 15 ok 16 - searching for a feature that shouldnt exist ok 17 - simple type ok 18 - base type with colon ok 19 - base type alone ok 20 - queried types are not interpolated ok 21 ok 22 ok 23 - An object of class 'Bio::DB::GFF::Typename' isa 'Bio::DB::GFF::Typename' ok 24 - feature deletion ok 25 ok 26 ok 27 - adding subfeatures ok 28 ok 29 ok 30 ok 31 ok 32 ok 33 ok 34 ok 35 ok 36 ok 37 ok 38 ok 39 ok 40 ok 41 ok 42 ok 43 ok 44 - feature names should be case insensitive ok 45 ok 46 ok 47 ok 48 ok 49 ok 50 ok 51 ok 52 ok 53 ok 54 ok 55 ok 56 ok 57 ok 58 ok 59 ok 60 ok 61 ok 62 ok 63 ok 64 - base type ok 65 - base:source type ok 66 ok 67 ok 68 ok 69 ok 70 ok 71 ok 72 ok 73 - An object of class 'Bio::Location::Split' isa 'Bio::Location::Split' ok 74 ok 75 ok 76 ok 77 ok 78 ok 79 ok 80 ok 81 ok 82 ok 83 ok 84 ok 85 ok 86 ok 87 ok 88 ok 89 ok 90 ok 91 ok 92 ok 93 ok 94 ok 95 ok 96 ok 97 ok 98 ok 99 ok 100 ok 101 ok 102 - keyword search; 1 term ok 103 - keyword search; 2 terms ok 104 ok 105 ok 106 ok 107 ok 108 ok 109 ok 110 ok 111 # skip Namespaces only supported for DBI::mysql and DBI::Pg adaptors ok 112 # skip Namespaces only supported for DBI::mysql and DBI::Pg adaptors ok 113 # skip Namespaces only supported for DBI::mysql and DBI::Pg adaptors ok 114 # skip Namespaces only supported for DBI::mysql and DBI::Pg adaptors ok 115 # skip Namespaces only supported for DBI::mysql and DBI::Pg adaptors ok 116 # skip Namespaces only supported for DBI::mysql and DBI::Pg adaptors ok All tests successful. Files=4, Tests=137, 2 wallclock secs ( 0.02 usr 0.01 sys + 1.29 cusr 0.34 csys = 1.66 CPU) Result: PASS make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/libbio-db-seqfeature-perl/ make -j2 install DESTDIR=/<>/debian/libbio-db-seqfeature-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/<>' Manifying 1 pod document Manifying 20 pod documents Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature/NormalizedTableFeatureI.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature/NormalizedFeatureI.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature/Segment.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature/Store.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature/NormalizedFeature.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature/Store/GFF3Loader.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature/Store/LoadHelper.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature/Store/berkeleydb.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature/Store/berkeleydb3.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature/Store/memory.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature/Store/Loader.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature/Store/GFF2Loader.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature/Store/bdb.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature/Store/FeatureFileLoader.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature/Store/DBI/SQLite.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature/Store/DBI/MariaDB.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature/Store/DBI/Pg.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature/Store/DBI/mysql.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/perl5/Bio/DB/SeqFeature/Store/DBI/Iterator.pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man1/bp_seqfeature_load.1p Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature::Store::GFF3Loader.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature::Store.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature::Segment.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature::Store::berkeleydb3.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature::Store::LoadHelper.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature::Store::DBI::mysql.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature::Store::berkeleydb.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature::Store::DBI::Pg.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature::Store::memory.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature::Store::bdb.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature::Store::DBI::Iterator.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature::Store::DBI::SQLite.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature::Store::DBI::MariaDB.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature::NormalizedFeature.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature::Store::FeatureFileLoader.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature::Store::Loader.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature::NormalizedTableFeatureI.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature::NormalizedFeatureI.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/share/man/man3/Bio::DB::SeqFeature::Store::GFF2Loader.3pm Installing /<>/debian/libbio-db-seqfeature-perl/usr/bin/bp_seqfeature_load Installing /<>/debian/libbio-db-seqfeature-perl/usr/bin/bp_seqfeature_gff3 Installing /<>/debian/libbio-db-seqfeature-perl/usr/bin/bp_seqfeature_delete make[1]: Leaving directory '/<>' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libbio-db-seqfeature-perl' in '../libbio-db-seqfeature-perl_1.7.5-1_all.deb'. dpkg-genbuildinfo -O../libbio-db-seqfeature-perl_1.7.5-1_amd64.buildinfo dpkg-genchanges -O../libbio-db-seqfeature-perl_1.7.5-1_amd64.changes dpkg-genchanges: info: including full source code in upload dpkg-source -Zxz --after-build . dpkg-buildpackage: info: full upload (original source is included) -------------------------------------------------------------------------------- Build finished at 2024-10-11T16:03:03Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libbio-db-seqfeature-perl_1.7.5-1_amd64.changes: ------------------------------------------------ Format: 1.8 Date: Fri, 11 Oct 2024 12:41:29 +0200 Source: libbio-db-seqfeature-perl Binary: libbio-db-seqfeature-perl Architecture: source all Version: 1.7.5-1 Distribution: perl-5.40-throwaway Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: libbio-db-seqfeature-perl - Normalized feature for use with Bio::DB::SeqFeature::Store Changes: libbio-db-seqfeature-perl (1.7.5-1) unstable; urgency=medium . * New upstream version 1.7.5 * d/control: declare compliance to standards version 4.7.0. * d/copyright: update upstream copyright year. * d/control: add myself to uploaders. Checksums-Sha1: 227b8ead67a4524a6528ebddd32c4eb1661f7a48 1434 libbio-db-seqfeature-perl_1.7.5-1.dsc fa9683859235e2e08868e5fd131cdb2f64138e33 274481 libbio-db-seqfeature-perl_1.7.5.orig.tar.gz cd771a39cd01b81985f17dd21f0f99ae0414dbba 2312 libbio-db-seqfeature-perl_1.7.5-1.debian.tar.xz f8e449cb6ffa379170e614495cfe8e8733277ba6 166068 libbio-db-seqfeature-perl_1.7.5-1_all.deb 79d76277efff17d970db199e809df47103fadbd1 7664 libbio-db-seqfeature-perl_1.7.5-1_amd64.buildinfo Checksums-Sha256: e38d227be6fd9a16996ed40bd3fc15c591fbf8dea590b9adeccabf6a748247fc 1434 libbio-db-seqfeature-perl_1.7.5-1.dsc 384b3b416f43df2bf4272abeeac5671310b21e75951be1ddc52daa41794dd2d1 274481 libbio-db-seqfeature-perl_1.7.5.orig.tar.gz b043261a411808b53227d6cb3287c85ac6fe937886107047e173ebc074cadd08 2312 libbio-db-seqfeature-perl_1.7.5-1.debian.tar.xz 01f386cc6ed1f869e7e400daea4f5bd12156946b0a8b6cc7513526629c5b4a9a 166068 libbio-db-seqfeature-perl_1.7.5-1_all.deb c6f73fd3f78d6373d19c6b08c19d1aace82e8b286a4c96e0d55e20186dfa7f51 7664 libbio-db-seqfeature-perl_1.7.5-1_amd64.buildinfo Files: 52800706d3135d368f169e4104ddb95e 1434 perl optional libbio-db-seqfeature-perl_1.7.5-1.dsc 521c760af1b2e8f095c7a9c5ff0f8381 274481 perl optional libbio-db-seqfeature-perl_1.7.5.orig.tar.gz a2bbfffd1dc5c25ab443253ced8ff169 2312 perl optional libbio-db-seqfeature-perl_1.7.5-1.debian.tar.xz 6268e32aa8f7c8ed028c3468fed2082b 166068 perl optional libbio-db-seqfeature-perl_1.7.5-1_all.deb 4f920f031b55ceb2166348ca58eef0e1 7664 perl optional libbio-db-seqfeature-perl_1.7.5-1_amd64.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: libbio-db-seqfeature-perl Binary: libbio-db-seqfeature-perl Architecture: all source Version: 1.7.5-1 Checksums-Md5: 52800706d3135d368f169e4104ddb95e 1434 libbio-db-seqfeature-perl_1.7.5-1.dsc 6268e32aa8f7c8ed028c3468fed2082b 166068 libbio-db-seqfeature-perl_1.7.5-1_all.deb Checksums-Sha1: 227b8ead67a4524a6528ebddd32c4eb1661f7a48 1434 libbio-db-seqfeature-perl_1.7.5-1.dsc f8e449cb6ffa379170e614495cfe8e8733277ba6 166068 libbio-db-seqfeature-perl_1.7.5-1_all.deb Checksums-Sha256: e38d227be6fd9a16996ed40bd3fc15c591fbf8dea590b9adeccabf6a748247fc 1434 libbio-db-seqfeature-perl_1.7.5-1.dsc 01f386cc6ed1f869e7e400daea4f5bd12156946b0a8b6cc7513526629c5b4a9a 166068 libbio-db-seqfeature-perl_1.7.5-1_all.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Fri, 11 Oct 2024 16:03:03 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: apache2-bin (= 2.4.62-3), autoconf (= 2.72-3), automake (= 1:1.16.5-1.3), autopoint (= 0.22.5-2), autotools-dev (= 20220109.1), base-files (= 13.5), base-passwd (= 3.6.4), bash (= 5.2.32-1+b1), binutils (= 2.43.1-5), binutils-common (= 2.43.1-5), binutils-x86-64-linux-gnu (= 2.43.1-5), bsdextrautils (= 2.40.2-9), bsdutils (= 1:2.40.2-9), build-essential (= 12.12), bzip2 (= 1.0.8-6), ca-certificates (= 20240203), coreutils (= 9.4-3.1), cpp (= 4:14.2.0-1), cpp-13 (= 13.3.0-8), cpp-13-x86-64-linux-gnu (= 13.3.0-8), cpp-14 (= 14.2.0-6), cpp-14-x86-64-linux-gnu (= 14.2.0-6), cpp-x86-64-linux-gnu (= 4:14.2.0-1), dash (= 0.5.12-9), debconf (= 1.5.87), debhelper (= 13.20), debianutils (= 5.20), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.0-1), diffutils (= 1:3.10-1), dpkg (= 1.22.11), dpkg-dev (= 1.22.11), dwz (= 0.15-1+b1), file (= 1:5.45-3), findutils (= 4.10.0-3), g++ (= 4:14.2.0-1), g++-14 (= 14.2.0-6), g++-14-x86-64-linux-gnu (= 14.2.0-6), g++-x86-64-linux-gnu (= 4:14.2.0-1), gcc (= 4:14.2.0-1), gcc-13 (= 13.3.0-8), gcc-13-base (= 13.3.0-8), gcc-13-x86-64-linux-gnu (= 13.3.0-8), gcc-14 (= 14.2.0-6), gcc-14-base (= 14.2.0-6), gcc-14-x86-64-linux-gnu (= 14.2.0-6), gcc-x86-64-linux-gnu (= 4:14.2.0-1), gettext (= 0.22.5-2), gettext-base (= 0.22.5-2), grep (= 3.11-4), groff-base (= 1.23.0-5), gzip (= 1.12-1.1), hostname (= 3.25), init-system-helpers (= 1.67), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-2), libalgorithm-diff-perl (= 1.201-1), libapache-dbi-perl (= 1.12-3), libapache2-mod-perl2 (= 2.0.13-2+b1), libapr1t64 (= 1.7.5-1), libaprutil1-dbd-sqlite3 (= 1.6.3-3), libaprutil1-ldap (= 1.6.3-3), libaprutil1t64 (= 1.6.3-3), libarchive-zip-perl (= 1.68-1), libasan8 (= 14.2.0-6), libatomic1 (= 14.2.0-6), libattr1 (= 1:2.5.2-1), libaudit-common (= 1:4.0.1-1), libaudit1 (= 1:4.0.1-1), libbinutils (= 2.43.1-5), libbio-db-biofetch-perl (= 1.7.3-4), libbio-db-gff-perl (= 1.7.4-1), libbio-perl-perl (= 1.7.8-1), libblkid1 (= 2.40.2-9), libbrotli1 (= 1.1.0-2+b4), libbz2-1.0 (= 1.0.8-6), libc-bin (= 2.40-3), libc-dev-bin (= 2.40-3), libc6 (= 2.40-3), libc6-dev (= 2.40-3), libcap-ng0 (= 0.8.5-2), libcap2 (= 1:2.66-5), libcapture-tiny-perl (= 0.48-2), libcc1-0 (= 14.2.0-6), libcgi-pm-perl (= 4.66-1), libclass-data-inheritable-perl (= 0.08-3), libclone-perl (= 0.47-1+b1), libcom-err2 (= 1.47.1-1), libcrypt-dev (= 1:4.4.36-5), libcrypt1 (= 1:4.4.36-5), libctf-nobfd0 (= 2.43.1-5), libctf0 (= 2.43.1-5), libcurl4t64 (= 8.10.1-2), libdata-stag-perl (= 0.14-3), libdb5.3t64 (= 5.3.28+dfsg2-8), libdbd-pg-perl (= 3.18.0-1+b3), libdbd-sqlite3-perl (= 1.74-1+b3), libdbi-perl (= 1.645-1+b1), libdebconfclient0 (= 0.272), libdebhelper-perl (= 13.20), libdevel-stacktrace-perl (= 2.0500-1), libdevel-symdump-perl (= 2.18-5), libdpkg-perl (= 1.22.11), libelf1t64 (= 0.191-2), libencode-locale-perl (= 1.05-3), libexception-class-perl (= 1.45-1), libexpat1 (= 2.6.3-1), libffi8 (= 3.4.6-1), libfile-listing-perl (= 6.16-1), libfile-stripnondeterminism-perl (= 1.14.0-1), libgcc-13-dev (= 13.3.0-8), libgcc-14-dev (= 14.2.0-6), libgcc-s1 (= 14.2.0-6), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgmp10 (= 2:6.3.0+dfsg-2+b1), libgnutls30t64 (= 3.8.6-2), libgomp1 (= 14.2.0-6), libgprofng0 (= 2.43.1-5), libgssapi-krb5-2 (= 1.21.3-3), libhogweed6t64 (= 3.10-1), libhtml-parser-perl (= 3.83-1+b1), libhtml-tagset-perl (= 3.24-1), libhtml-tree-perl (= 5.07-3), libhttp-cookies-perl (= 6.11-1), libhttp-date-perl (= 6.06-1), libhttp-message-perl (= 7.00-2), libhttp-negotiate-perl (= 6.01-2), libhwasan0 (= 14.2.0-6), libicu72 (= 72.1-5), libidn2-0 (= 2.3.7-2), libio-html-perl (= 1.004-3), libio-socket-ssl-perl (= 2.089-1), libio-string-perl (= 1.08-4), libisl23 (= 0.27-1), libitm1 (= 14.2.0-6), libjansson4 (= 2.14-2+b2), libk5crypto3 (= 1.21.3-3), libkeyutils1 (= 1.6.3-3), libkrb5-3 (= 1.21.3-3), libkrb5support0 (= 1.21.3-3), libldap-2.5-0 (= 2.5.18+dfsg-3+b1), liblsan0 (= 14.2.0-6), liblua5.4-0 (= 5.4.6-3+b1), liblwp-mediatypes-perl (= 6.04-2), liblwp-protocol-https-perl (= 6.14-1), liblzma5 (= 5.6.2-2), libmagic-mgc (= 1:5.45-3), libmagic1t64 (= 1:5.45-3), libmd0 (= 1.1.0-2), libmount1 (= 2.40.2-9), libmpc3 (= 1.3.1-1+b2), libmpfr6 (= 4.2.1-1+b1), libnet-http-perl (= 6.23-1), libnet-ssleay-perl (= 1.94-1+b2), libnettle8t64 (= 3.10-1), libnghttp2-14 (= 1.63.0-1), libp11-kit0 (= 0.25.5-2), libpam-modules (= 1.5.3-7), libpam-modules-bin (= 1.5.3-7), libpam-runtime (= 1.5.3-7), libpam0g (= 1.5.3-7), libpcre2-8-0 (= 10.42-4+b1), libperl5.40 (= 5.40.0-5), libpipeline1 (= 1.5.8-1), libpq5 (= 17.0-1+b1), libpsl5t64 (= 0.21.2-1.1), libquadmath0 (= 14.2.0-6), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b4), libsasl2-2 (= 2.1.28+dfsg1-8), libsasl2-modules-db (= 2.1.28+dfsg1-8), libseccomp2 (= 2.5.5-1+b1), libselinux1 (= 3.7-3), libsframe1 (= 2.43.1-5), libsmartcols1 (= 2.40.2-9), libsqlite3-0 (= 3.46.1-1), libssh2-1t64 (= 1.11.0-7), libssl3t64 (= 3.3.2-1), libstdc++-14-dev (= 14.2.0-6), libstdc++6 (= 14.2.0-6), libsub-uplevel-perl (= 0.2800-3), libsystemd0 (= 256.7-1), libtasn1-6 (= 4.19.0-3+b2), libtest-deep-perl (= 1.204-1), libtest-differences-perl (= 0.71-1), libtest-exception-perl (= 0.43-3), libtest-most-perl (= 0.38-1), libtest-warn-perl (= 0.37-2), libtext-diff-perl (= 1.45-2), libtimedate-perl (= 2.3300-2), libtinfo6 (= 6.5-2), libtool (= 2.4.7-7), libtry-tiny-perl (= 0.32-1), libtsan2 (= 14.2.0-6), libubsan1 (= 14.2.0-6), libuchardet0 (= 0.0.8-1+b1), libudev1 (= 256.7-1), libunistring5 (= 1.2-1), liburi-perl (= 5.30-1), libuuid1 (= 2.40.2-9), libwww-perl (= 6.77-1), libwww-robotrules-perl (= 6.02-1), libxml2 (= 2.12.7+dfsg+really2.9.14-0.1), libzstd1 (= 1.5.6+dfsg-1), linux-libc-dev (= 6.11.2-1), m4 (= 1.4.19-4), make (= 4.3-4.1), man-db (= 2.13.0-1), mawk (= 1.3.4.20240905-1), ncurses-base (= 6.5-2), ncurses-bin (= 6.5-2), netbase (= 6.4), openssl (= 3.3.2-1), openssl-provider-legacy (= 3.3.2-1), patch (= 2.7.6-7), perl (= 5.40.0-5), perl-base (= 5.40.0-5), perl-modules-5.40 (= 5.40.0-5), perl-openssl-defaults (= 7+b2), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.24), sysvinit-utils (= 3.10-2), tar (= 1.35+dfsg-3), usr-is-merged (= 39), util-linux (= 2.40.2-9), xz-utils (= 5.6.2-2), zlib1g (= 1:1.3.dfsg+really1.3.1-1) Environment: DEB_BUILD_OPTIONS="parallel=2" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" LD_LIBRARY_PATH="/usr/lib/libeatmydata" SOURCE_DATE_EPOCH="1728643289" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libbio-db-seqfeature-perl_1.7.5-1_all.deb ----------------------------------------- new Debian package, version 2.0. size 166068 bytes: control archive=2088 bytes. 1185 bytes, 23 lines control 4194 bytes, 47 lines md5sums Package: libbio-db-seqfeature-perl Version: 1.7.5-1 Architecture: all Maintainer: Debian Med Packaging Team Installed-Size: 633 Depends: perl:any, libbio-perl-perl, libbio-db-gff-perl, libdbd-pg-perl, libdbd-sqlite3-perl, libdbi-perl Breaks: libbio-perl-perl (<< 1.7.3) Replaces: libbio-perl-perl (<< 1.7.3) Section: perl Priority: optional Homepage: https://metacpan.org/release/Bio-DB-SeqFeature Description: Normalized feature for use with Bio::DB::SeqFeature::Store The Bio::DB::SeqFeature object is the default SeqFeature class stored in Bio::DB::SeqFeature databases. It implements both the Bio::DB::SeqFeature::NormalizedFeatureI and Bio::DB::SeqFeature::NormalizedTableFeatureI interfaces, which means that its subfeatures, if any, are stored in the database in a normalized fashion, and that the parent/child hierarchy of features and subfeatures are also stored in the database as set of tuples. This provides efficiencies in both storage and retrieval speed. . Typically you will not create Bio::DB::SeqFeature directly, but will ask the database to do so on your behalf, as described in Bio::DB::SeqFeature::Store. drwxr-xr-x root/root 0 2024-10-11 10:41 ./ drwxr-xr-x root/root 0 2024-10-11 10:41 ./usr/ drwxr-xr-x root/root 0 2024-10-11 10:41 ./usr/bin/ -rwxr-xr-x root/root 4665 2024-10-11 10:41 ./usr/bin/bp_seqfeature_delete -rwxr-xr-x root/root 2396 2024-10-11 10:41 ./usr/bin/bp_seqfeature_gff3 -rwxr-xr-x root/root 7264 2024-10-11 10:41 ./usr/bin/bp_seqfeature_load drwxr-xr-x root/root 0 2024-10-11 10:41 ./usr/share/ drwxr-xr-x root/root 0 2024-10-11 10:41 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-10-11 10:41 ./usr/share/doc/libbio-db-seqfeature-perl/ -rw-r--r-- root/root 670 2024-10-11 10:41 ./usr/share/doc/libbio-db-seqfeature-perl/changelog.Debian.gz -rw-r--r-- root/root 410 2024-09-27 22:01 ./usr/share/doc/libbio-db-seqfeature-perl/changelog.gz -rw-r--r-- root/root 1244 2024-10-11 10:41 ./usr/share/doc/libbio-db-seqfeature-perl/copyright drwxr-xr-x root/root 0 2024-10-11 10:41 ./usr/share/man/ drwxr-xr-x root/root 0 2024-10-11 10:41 ./usr/share/man/man1/ -rw-r--r-- root/root 2472 2024-10-11 10:41 ./usr/share/man/man1/bp_seqfeature_load.1p.gz drwxr-xr-x root/root 0 2024-10-11 10:41 ./usr/share/man/man3/ -rw-r--r-- root/root 4222 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature.3pm.gz -rw-r--r-- root/root 4553 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature::NormalizedFeature.3pm.gz -rw-r--r-- root/root 1337 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature::NormalizedFeatureI.3pm.gz -rw-r--r-- root/root 1404 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature::NormalizedTableFeatureI.3pm.gz -rw-r--r-- root/root 4098 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature::Segment.3pm.gz -rw-r--r-- root/root 17418 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature::Store.3pm.gz -rw-r--r-- root/root 887 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature::Store::DBI::Iterator.3pm.gz -rw-r--r-- root/root 2864 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature::Store::DBI::MariaDB.3pm.gz -rw-r--r-- root/root 2786 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature::Store::DBI::Pg.3pm.gz -rw-r--r-- root/root 2972 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature::Store::DBI::SQLite.3pm.gz -rw-r--r-- root/root 2859 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature::Store::DBI::mysql.3pm.gz -rw-r--r-- root/root 6667 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature::Store::FeatureFileLoader.3pm.gz -rw-r--r-- root/root 5043 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature::Store::GFF2Loader.3pm.gz -rw-r--r-- root/root 5575 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature::Store::GFF3Loader.3pm.gz -rw-r--r-- root/root 1143 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature::Store::LoadHelper.3pm.gz -rw-r--r-- root/root 4443 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature::Store::Loader.3pm.gz -rw-r--r-- root/root 981 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature::Store::bdb.3pm.gz -rw-r--r-- root/root 3752 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature::Store::berkeleydb.3pm.gz -rw-r--r-- root/root 1524 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature::Store::berkeleydb3.3pm.gz -rw-r--r-- root/root 2791 2024-10-11 10:41 ./usr/share/man/man3/Bio::DB::SeqFeature::Store::memory.3pm.gz drwxr-xr-x root/root 0 2024-10-11 10:41 ./usr/share/perl5/ drwxr-xr-x root/root 0 2024-10-11 10:41 ./usr/share/perl5/Bio/ drwxr-xr-x root/root 0 2024-10-11 10:41 ./usr/share/perl5/Bio/DB/ -rw-r--r-- root/root 12627 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature.pm drwxr-xr-x root/root 0 2024-10-11 10:41 ./usr/share/perl5/Bio/DB/SeqFeature/ -rw-r--r-- root/root 22407 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature/NormalizedFeature.pm -rw-r--r-- root/root 1237 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature/NormalizedFeatureI.pm -rw-r--r-- root/root 1443 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature/NormalizedTableFeatureI.pm -rw-r--r-- root/root 14369 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature/Segment.pm -rw-r--r-- root/root 81646 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature/Store.pm drwxr-xr-x root/root 0 2024-10-11 10:41 ./usr/share/perl5/Bio/DB/SeqFeature/Store/ drwxr-xr-x root/root 0 2024-10-11 10:41 ./usr/share/perl5/Bio/DB/SeqFeature/Store/DBI/ -rw-r--r-- root/root 680 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature/Store/DBI/Iterator.pm -rw-r--r-- root/root 61016 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature/Store/DBI/MariaDB.pm -rw-r--r-- root/root 29460 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature/Store/DBI/Pg.pm -rw-r--r-- root/root 38027 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature/Store/DBI/SQLite.pm -rw-r--r-- root/root 60969 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature/Store/DBI/mysql.pm -rw-r--r-- root/root 25557 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature/Store/FeatureFileLoader.pm -rw-r--r-- root/root 13878 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature/Store/GFF2Loader.pm -rw-r--r-- root/root 31048 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature/Store/GFF3Loader.pm -rw-r--r-- root/root 4810 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature/Store/LoadHelper.pm -rw-r--r-- root/root 20996 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature/Store/Loader.pm -rw-r--r-- root/root 2519 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature/Store/bdb.pm -rw-r--r-- root/root 44238 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature/Store/berkeleydb.pm -rw-r--r-- root/root 21120 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature/Store/berkeleydb3.pm -rw-r--r-- root/root 22855 2024-09-27 22:01 ./usr/share/perl5/Bio/DB/SeqFeature/Store/memory.pm +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: full Build-Space: 3396 Build-Time: 7 Distribution: perl-5.40-throwaway Host Architecture: amd64 Install-Time: 21 Job: /srv/debomatic/incoming/libbio-db-seqfeature-perl_1.7.5-1.dsc Machine Architecture: amd64 Package: libbio-db-seqfeature-perl Package-Time: 35 Source-Version: 1.7.5-1 Space: 3396 Status: successful Version: 1.7.5-1 -------------------------------------------------------------------------------- Finished at 2024-10-11T16:03:03Z Build needed 00:00:35, 3396k disk space