sbuild (Debian sbuild) 0.85.10 (30 May 2024) on carme.larted.org.uk +==============================================================================+ | libbio-db-refseq-perl 1.7.4-1 (amd64) Tue, 06 Aug 2024 13:08:16 +0000 | +==============================================================================+ Package: libbio-db-refseq-perl Version: 1.7.4-1 Source Version: 1.7.4-1 Distribution: perl-5.40-throwaway Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: full I: NOTICE: Log filtering will replace 'var/run/schroot/mount/perl-5.40-amd64-debomatic-1afbc5b5-cf4f-4e87-9d6a-19e3b0153093' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup libbio-db-refseq-perl_1.7.4-1 perl-5.40-throwaway amd64 ------------------------------------------------------------------------------------------------------------------------------ I: Finished running '/usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup libbio-db-refseq-perl_1.7.4-1 perl-5.40-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- I: NOTICE: Log filtering will replace 'build/libbio-db-refseq-perl-arLCM8/resolver-6TQo1A' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 file:/srv/reprepro perl-5.40 InRelease [3042 B] Get:1 file:/srv/reprepro perl-5.40 InRelease [3042 B] Ign:2 http://localhost:3142/debian sid InRelease Hit:3 http://deb.debian.org/debian unstable InRelease Hit:2 http://localhost:3142/debian sid InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- /srv/debomatic/incoming/libbio-db-refseq-perl_1.7.4-1.dsc exists in /srv/debomatic/incoming; copying to chroot I: NOTICE: Log filtering will replace 'build/libbio-db-refseq-perl-arLCM8/libbio-db-refseq-perl-1.7.4' with '<>' I: NOTICE: Log filtering will replace 'build/libbio-db-refseq-perl-arLCM8' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), build-essential, fakeroot, libbio-perl-perl, libtest-most-perl, libhttp-message-perl, libwww-perl, libtest-requiresinternet-perl, libtest-needs-perl, perl Filtered Build-Depends: debhelper-compat (= 12), build-essential, fakeroot, libbio-perl-perl, libtest-most-perl, libhttp-message-perl, libwww-perl, libtest-requiresinternet-perl, libtest-needs-perl, perl dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [766 B] Get:5 copy:/<>/apt_archive ./ Packages [778 B] Fetched 2153 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils ca-certificates debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file gettext gettext-base groff-base intltool-debian libalgorithm-diff-perl libarchive-zip-perl libbio-perl-perl libcapture-tiny-perl libclass-data-inheritable-perl libclone-perl libdata-stag-perl libdebhelper-perl libdevel-stacktrace-perl libelf1t64 libencode-locale-perl libexception-class-perl libfakeroot libfile-listing-perl libfile-stripnondeterminism-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu72 libio-html-perl libio-socket-ssl-perl libio-string-perl liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1t64 libnet-http-perl libnet-ssleay-perl libpipeline1 libsub-uplevel-perl libtest-deep-perl libtest-differences-perl libtest-exception-perl libtest-most-perl libtest-needs-perl libtest-requiresinternet-perl libtest-warn-perl libtext-diff-perl libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libwww-perl libwww-robotrules-perl libxml2 m4 man-db netbase openssl perl-openssl-defaults po-debconf sensible-utils Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff bioperl libxml-sax-expatxs-perl libdata-dump-perl libcrypt-ssleay-perl libtool-doc gfortran | fortran95-compiler gcj-jdk libsub-name-perl libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libalgorithm-diff-xs-perl bioperl-run | libbio-perl-run-perl libace-perl libalgorithm-munkres-perl libarray-compare-perl libbio-asn1-entrezgene-perl libconvert-binary-c-perl libdbd-sqlite3-perl libdbd-mysql-perl libdbd-pg-perl libgd-perl libgraph-perl libgraphviz-perl libhtml-tableextract-perl liblist-moreutils-perl libpostscript-perl libset-scalar-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-perl libsvg-graph-perl libxml-dom-xpath-perl libxml-parser-perl libxml-sax-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl libxml-writer-perl libxml-libxml-perl perl-tk libgd-gd2-perl | libgd-gd2-noxpm-perl libxml-libxslt-perl libmldbm-perl libxml-perl libarchive-cpio-perl libhtml-format-perl libio-compress-brotli-perl libltdl-dev libdata-dump-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils ca-certificates debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file gettext gettext-base groff-base intltool-debian libalgorithm-diff-perl libarchive-zip-perl libbio-perl-perl libcapture-tiny-perl libclass-data-inheritable-perl libclone-perl libdata-stag-perl libdebhelper-perl libdevel-stacktrace-perl libelf1t64 libencode-locale-perl libexception-class-perl libfakeroot libfile-listing-perl libfile-stripnondeterminism-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu72 libio-html-perl libio-socket-ssl-perl libio-string-perl liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1t64 libnet-http-perl libnet-ssleay-perl libpipeline1 libsub-uplevel-perl libtest-deep-perl libtest-differences-perl libtest-exception-perl libtest-most-perl libtest-needs-perl libtest-requiresinternet-perl libtest-warn-perl libtext-diff-perl libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libwww-perl libwww-robotrules-perl libxml2 m4 man-db netbase openssl perl-openssl-defaults po-debconf sbuild-build-depends-main-dummy sensible-utils 0 upgraded, 74 newly installed, 0 to remove and 0 not upgraded. Need to get 25.7 MB/26.1 MB of archives. After this operation, 93.2 MB of additional disk space will be used. Get:1 file:/srv/reprepro perl-5.40/main amd64 libclone-perl amd64 0.46-1+b3 [13.7 kB] Get:2 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [940 B] Get:3 file:/srv/reprepro perl-5.40/main amd64 libhtml-parser-perl amd64 3.83-1+b1 [99.7 kB] Get:4 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get:5 file:/srv/reprepro perl-5.40/main amd64 libnet-ssleay-perl amd64 1.94-1+b2 [339 kB] Get:6 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:7 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.3.1-2 [1380 kB] Get:8 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get:9 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get:10 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get:11 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3 [42.9 kB] Get:12 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get:13 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get:14 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get:15 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-4 [96.6 kB] Get:16 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get:17 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.12.1-2 [1411 kB] Get:18 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get:19 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.71-3 [332 kB] Get:20 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:21 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:22 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get:23 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.16 [88.6 kB] Get:24 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-7 [517 kB] Get:25 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:26 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:27 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get:28 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get:29 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.191-2 [188 kB] Get:30 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:31 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5 [9396 kB] Get:32 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg-3+b1 [671 kB] Get:33 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get:34 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:35 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:36 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.16 [891 kB] Get:37 http://deb.debian.org/debian unstable/main amd64 libfakeroot amd64 1.35.1-1 [28.6 kB] Get:38 http://deb.debian.org/debian unstable/main amd64 fakeroot amd64 1.35.1-1 [74.5 kB] Get:39 http://deb.debian.org/debian unstable/main amd64 libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get:40 http://deb.debian.org/debian unstable/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:41 http://deb.debian.org/debian unstable/main amd64 libdata-stag-perl all 0.14-3 [448 kB] Get:42 http://deb.debian.org/debian unstable/main amd64 libbio-perl-perl all 1.7.8-1 [2603 kB] Get:43 http://deb.debian.org/debian unstable/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:44 http://deb.debian.org/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:45 http://deb.debian.org/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:46 http://deb.debian.org/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:47 http://deb.debian.org/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:48 http://deb.debian.org/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:49 http://deb.debian.org/debian unstable/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:50 http://deb.debian.org/debian unstable/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:51 http://deb.debian.org/debian unstable/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:52 http://deb.debian.org/debian unstable/main amd64 liburi-perl all 5.28-1 [98.6 kB] Get:53 http://deb.debian.org/debian unstable/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:54 http://deb.debian.org/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:55 http://deb.debian.org/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:56 http://deb.debian.org/debian unstable/main amd64 libhttp-message-perl all 6.46-1 [79.7 kB] Get:57 http://deb.debian.org/debian unstable/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:58 http://deb.debian.org/debian unstable/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:59 http://deb.debian.org/debian unstable/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get:60 http://deb.debian.org/debian unstable/main amd64 libio-socket-ssl-perl all 2.088-1 [222 kB] Get:61 http://deb.debian.org/debian unstable/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:62 http://deb.debian.org/debian unstable/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:63 http://deb.debian.org/debian unstable/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:64 http://deb.debian.org/debian unstable/main amd64 libwww-perl all 6.77-1 [183 kB] Get:65 http://deb.debian.org/debian unstable/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get:66 http://deb.debian.org/debian unstable/main amd64 libsub-uplevel-perl all 0.2800-3 [14.0 kB] Get:67 http://deb.debian.org/debian unstable/main amd64 libtest-deep-perl all 1.204-1 [52.9 kB] Get:68 http://deb.debian.org/debian unstable/main amd64 libtext-diff-perl all 1.45-2 [27.2 kB] Get:69 http://deb.debian.org/debian unstable/main amd64 libtest-differences-perl all 0.71-1 [17.9 kB] Get:70 http://deb.debian.org/debian unstable/main amd64 libtest-exception-perl all 0.43-3 [16.9 kB] Get:71 http://deb.debian.org/debian unstable/main amd64 libtest-warn-perl all 0.37-2 [14.5 kB] Get:72 http://deb.debian.org/debian unstable/main amd64 libtest-most-perl all 0.38-1 [25.1 kB] Get:73 http://deb.debian.org/debian unstable/main amd64 libtest-needs-perl all 0.002010-1 [9352 B] Get:74 http://deb.debian.org/debian unstable/main amd64 libtest-requiresinternet-perl all 0.05-4 [6864 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 25.7 MB in 0s (104 MB/s) Selecting previously unselected package netbase. (Reading database ... 22925 files and directories currently installed.) Preparing to unpack .../00-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../02-openssl_3.3.1-2_amd64.deb ... Unpacking openssl (3.3.1-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../03-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../04-libmagic-mgc_1%3a5.45-3_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../05-libmagic1t64_1%3a5.45-3_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3) ... Selecting previously unselected package file. 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Selecting previously unselected package libhttp-cookies-perl. Preparing to unpack .../54-libhttp-cookies-perl_6.11-1_all.deb ... Unpacking libhttp-cookies-perl (6.11-1) ... Selecting previously unselected package libhttp-negotiate-perl. Preparing to unpack .../55-libhttp-negotiate-perl_6.01-2_all.deb ... Unpacking libhttp-negotiate-perl (6.01-2) ... Selecting previously unselected package perl-openssl-defaults:amd64. Preparing to unpack .../56-perl-openssl-defaults_7+b2_amd64.deb ... Unpacking perl-openssl-defaults:amd64 (7+b2) ... Selecting previously unselected package libnet-ssleay-perl:amd64. Preparing to unpack .../57-libnet-ssleay-perl_1.94-1+b2_amd64.deb ... Unpacking libnet-ssleay-perl:amd64 (1.94-1+b2) ... Selecting previously unselected package libio-socket-ssl-perl. Preparing to unpack .../58-libio-socket-ssl-perl_2.088-1_all.deb ... Unpacking libio-socket-ssl-perl (2.088-1) ... Selecting previously unselected package libnet-http-perl. Preparing to unpack .../59-libnet-http-perl_6.23-1_all.deb ... Unpacking libnet-http-perl (6.23-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../60-libtry-tiny-perl_0.31-2_all.deb ... Unpacking libtry-tiny-perl (0.31-2) ... Selecting previously unselected package libwww-robotrules-perl. Preparing to unpack .../61-libwww-robotrules-perl_6.02-1_all.deb ... Unpacking libwww-robotrules-perl (6.02-1) ... Selecting previously unselected package libwww-perl. Preparing to unpack .../62-libwww-perl_6.77-1_all.deb ... Unpacking libwww-perl (6.77-1) ... Selecting previously unselected package liblwp-protocol-https-perl. Preparing to unpack .../63-liblwp-protocol-https-perl_6.14-1_all.deb ... Unpacking liblwp-protocol-https-perl (6.14-1) ... Selecting previously unselected package libsub-uplevel-perl. Preparing to unpack .../64-libsub-uplevel-perl_0.2800-3_all.deb ... Unpacking libsub-uplevel-perl (0.2800-3) ... Selecting previously unselected package libtest-deep-perl. Preparing to unpack .../65-libtest-deep-perl_1.204-1_all.deb ... Unpacking libtest-deep-perl (1.204-1) ... Selecting previously unselected package libtext-diff-perl. Preparing to unpack .../66-libtext-diff-perl_1.45-2_all.deb ... Unpacking libtext-diff-perl (1.45-2) ... Selecting previously unselected package libtest-differences-perl. Preparing to unpack .../67-libtest-differences-perl_0.71-1_all.deb ... Unpacking libtest-differences-perl (0.71-1) ... Selecting previously unselected package libtest-exception-perl. Preparing to unpack .../68-libtest-exception-perl_0.43-3_all.deb ... Unpacking libtest-exception-perl (0.43-3) ... Selecting previously unselected package libtest-warn-perl. Preparing to unpack .../69-libtest-warn-perl_0.37-2_all.deb ... Unpacking libtest-warn-perl (0.37-2) ... Selecting previously unselected package libtest-most-perl. Preparing to unpack .../70-libtest-most-perl_0.38-1_all.deb ... Unpacking libtest-most-perl (0.38-1) ... Selecting previously unselected package libtest-needs-perl. Preparing to unpack .../71-libtest-needs-perl_0.002010-1_all.deb ... Unpacking libtest-needs-perl (0.002010-1) ... Selecting previously unselected package libtest-requiresinternet-perl. Preparing to unpack .../72-libtest-requiresinternet-perl_0.05-4_all.deb ... Unpacking libtest-requiresinternet-perl (0.05-4) ... Selecting previously unselected package sbuild-build-depends-main-dummy. Preparing to unpack .../73-sbuild-build-depends-main-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.7-2) ... Setting up libicu72:amd64 (72.1-5) ... Setting up bsdextrautils (2.40.2-4) ... Setting up libtest-deep-perl (1.204-1) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libclone-perl:amd64 (0.46-1+b3) ... Setting up libalgorithm-diff-perl (1.201-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdebhelper-perl (13.16) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up perl-openssl-defaults:amd64 (7+b2) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up file (1:5.45-3) ... Setting up libfakeroot:amd64 (1.35.1-1) ... Setting up libelf1t64:amd64 (0.191-2) ... Setting up libtest-needs-perl (0.002010-1) ... Setting up fakeroot (1.35.1-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libtext-diff-perl (1.45-2) ... Setting up libio-html-perl (1.004-3) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.71-3) ... Setting up libcapture-tiny-perl (0.48-2) ... Setting up libtimedate-perl (2.3300-2) ... Setting up dwz (0.15-1+b1) ... Setting up libdata-stag-perl (0.14-3) ... Configuration file '/etc/protocols' ==> File on system created by you or by a script. ==> File also in package provided by package maintainer. ==> Using current old file as you requested. Configuration file '/etc/services' ==> File on system created by you or by a script. ==> File also in package provided by package maintainer. ==> Using current old file as you requested. Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up libsub-uplevel-perl (0.2800-3) ... Setting up netbase (6.4) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libbio-perl-perl (1.7.8-1) ... Setting up openssl (3.3.1-2) ... Setting up libxml2:amd64 (2.12.7+dfsg-3+b1) ... Setting up liburi-perl (5.28-1) ... Setting up libnet-ssleay-perl:amd64 (1.94-1+b2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up gettext (0.22.5-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libtest-requiresinternet-perl (0.05-4) ... Setting up libtool (2.4.7-7) ... Setting up libtest-warn-perl (0.37-2) ... Setting up libtest-differences-perl (0.71-1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libtest-exception-perl (0.43-3) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up groff-base (1.23.0-5) ... Setting up libhtml-parser-perl:amd64 (3.83-1+b1) ... Setting up libio-socket-ssl-perl (2.088-1) ... Setting up libhttp-message-perl (6.46-1) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libtest-most-perl (0.38-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up man-db (2.12.1-2) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.16) ... Setting up libwww-perl (6.77-1) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Processing triggers for libc-bin (2.39-6) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.9.7-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.9.7-1 (2024-06-27) amd64 (x86_64) Toolchain package versions: binutils_2.43-1 dpkg-dev_1.22.11 g++-13_13.3.0-5 g++-14_14.2.0-1 gcc-13_13.3.0-5 gcc-14_14.2.0-1 libc6-dev_2.39-6 libstdc++-13-dev_13.3.0-5 libstdc++-14-dev_14.2.0-1 libstdc++6_14.2.0-1 linux-libc-dev_6.10.3-1 Package versions: adduser_3.137 apt_2.9.7 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 autotools-dev_20220109.1 base-files_13.5 base-passwd_3.6.4 bash_5.2.21-2.1 binutils_2.43-1 binutils-common_2.43-1 binutils-x86-64-linux-gnu_2.43-1 bsdextrautils_2.40.2-4 bsdutils_1:2.40.2-4 build-essential_12.10 bzip2_1.0.8-5.1 ca-certificates_20240203 coreutils_9.4-3.1 cpp_4:14.1.0-2 cpp-13_13.3.0-5 cpp-13-x86-64-linux-gnu_13.3.0-5 cpp-14_14.2.0-1 cpp-14-x86-64-linux-gnu_14.2.0-1 cpp-x86-64-linux-gnu_4:14.1.0-2 dash_0.5.12-9 debconf_1.5.87 debhelper_13.16 debian-archive-keyring_2023.4 debianutils_5.20 dh-autoreconf_20 dh-strip-nondeterminism_1.14.0-1 diffutils_1:3.10-1 dirmngr_2.2.43-8 dpkg_1.22.11 dpkg-dev_1.22.11 dwz_0.15-1+b1 eatmydata_131-2 fakeroot_1.35.1-1 file_1:5.45-3 findutils_4.10.0-2 g++_4:14.1.0-2 g++-13_13.3.0-5 g++-13-x86-64-linux-gnu_13.3.0-5 g++-14_14.2.0-1 g++-14-x86-64-linux-gnu_14.2.0-1 g++-x86-64-linux-gnu_4:14.1.0-2 gcc_4:14.1.0-2 gcc-13_13.3.0-5 gcc-13-base_13.3.0-5 gcc-13-x86-64-linux-gnu_13.3.0-5 gcc-14_14.2.0-1 gcc-14-base_14.2.0-1 gcc-14-x86-64-linux-gnu_14.2.0-1 gcc-x86-64-linux-gnu_4:14.1.0-2 gettext_0.22.5-2 gettext-base_0.22.5-2 gnupg_2.2.43-8 gnupg-l10n_2.2.43-8 gnupg-utils_2.2.43-8 gpg_2.2.43-8 gpg-agent_2.2.43-8 gpg-wks-client_2.2.43-8 gpgconf_2.2.43-8 gpgsm_2.2.43-8 gpgv_2.2.43-8 grep_3.11-4 groff-base_1.23.0-5 gzip_1.12-1.1 hostname_3.23+nmu2 init-system-helpers_1.66 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2 libalgorithm-diff-perl_1.201-1 libapt-pkg6.0t64_2.9.7 libarchive-zip-perl_1.68-1 libasan8_14.2.0-1 libassuan0_2.5.6-1+b1 libatomic1_14.2.0-1 libattr1_1:2.5.2-1 libaudit-common_1:3.1.2-4 libaudit1_1:3.1.2-4+b1 libbinutils_2.43-1 libbio-perl-perl_1.7.8-1 libblkid1_2.40.2-4 libbsd0_0.12.2-1 libbz2-1.0_1.0.8-5.1 libc-bin_2.39-6 libc-dev-bin_2.39-6 libc-l10n_2.39-6 libc6_2.39-6 libc6-dev_2.39-6 libcap-ng0_0.8.5-1+b1 libcap2_1:2.66-5 libcapture-tiny-perl_0.48-2 libcc1-0_14.2.0-1 libclass-data-inheritable-perl_0.08-3 libclone-perl_0.46-1+b3 libcrypt-dev_1:4.4.36-4 libcrypt1_1:4.4.36-4 libctf-nobfd0_2.43-1 libctf0_2.43-1 libdata-stag-perl_0.14-3 libdb5.3t64_5.3.28+dfsg2-7 libdebconfclient0_0.272 libdebhelper-perl_13.16 libdevel-stacktrace-perl_2.0500-1 libdpkg-perl_1.22.11 libeatmydata1_131-2 libelf1t64_0.191-2 libencode-locale-perl_1.05-3 libexception-class-perl_1.45-1 libfakeroot_1.35.1-1 libffi8_3.4.6-1 libfile-listing-perl_6.16-1 libfile-stripnondeterminism-perl_1.14.0-1 libgcc-13-dev_13.3.0-5 libgcc-14-dev_14.2.0-1 libgcc-s1_14.2.0-1 libgcrypt20_1.11.0-5 libgdbm-compat4t64_1.23-6 libgdbm6t64_1.23-6 libgmp10_2:6.3.0+dfsg-2+b1 libgnutls30t64_3.8.6-2 libgomp1_14.2.0-1 libgpg-error0_1.50-2 libgprofng0_2.43-1 libhogweed6t64_3.10-1 libhtml-parser-perl_3.83-1+b1 libhtml-tagset-perl_3.24-1 libhtml-tree-perl_5.07-3 libhttp-cookies-perl_6.11-1 libhttp-date-perl_6.06-1 libhttp-message-perl_6.46-1 libhttp-negotiate-perl_6.01-2 libhwasan0_14.2.0-1 libicu72_72.1-5 libidn2-0_2.3.7-2 libio-html-perl_1.004-3 libio-socket-ssl-perl_2.088-1 libio-string-perl_1.08-4 libisl23_0.26-3+b2 libitm1_14.2.0-1 libjansson4_2.14-2+b2 libksba8_1.6.7-2 libldap-2.5-0_2.5.18+dfsg-2+b1 liblsan0_14.2.0-1 liblwp-mediatypes-perl_6.04-2 liblwp-protocol-https-perl_6.14-1 liblz4-1_1.9.4-3 liblzma5_5.6.2-2 libmagic-mgc_1:5.45-3 libmagic1t64_1:5.45-3 libmd0_1.1.0-2 libmount1_2.40.2-4 libmpc3_1.3.1-1+b2 libmpfr6_4.2.1-1+b1 libncursesw6_6.5-2 libnet-http-perl_6.23-1 libnet-ssleay-perl_1.94-1+b2 libnettle8t64_3.10-1 libnpth0t64_1.6-3.1 libp11-kit0_0.25.5-2 libpam-modules_1.5.3-7 libpam-modules-bin_1.5.3-7 libpam-runtime_1.5.3-7 libpam0g_1.5.3-7 libpcre2-8-0_10.42-4+b1 libperl5.38t64_5.38.2-5 libperl5.40_5.40.0-1 libpipeline1_1.5.7-2 libquadmath0_14.2.0-1 libreadline8t64_8.2-4 libsasl2-2_2.1.28+dfsg1-6 libsasl2-modules-db_2.1.28+dfsg1-6 libseccomp2_2.5.5-1+b1 libselinux1_3.5-2+b3 libsemanage-common_3.5-1 libsemanage2_3.5-1+b4 libsepol2_3.5-2+b1 libsframe1_2.43-1 libsmartcols1_2.40.2-4 libsqlite3-0_3.46.0-1 libssl3t64_3.3.1-2 libstdc++-13-dev_13.3.0-5 libstdc++-14-dev_14.2.0-1 libstdc++6_14.2.0-1 libsub-uplevel-perl_0.2800-3 libsystemd0_256.4-2 libtasn1-6_4.19.0-3+b2 libtest-deep-perl_1.204-1 libtest-differences-perl_0.71-1 libtest-exception-perl_0.43-3 libtest-most-perl_0.38-1 libtest-needs-perl_0.002010-1 libtest-requiresinternet-perl_0.05-4 libtest-warn-perl_0.37-2 libtext-diff-perl_1.45-2 libtimedate-perl_2.3300-2 libtinfo6_6.5-2 libtool_2.4.7-7 libtry-tiny-perl_0.31-2 libtsan2_14.2.0-1 libubsan1_14.2.0-1 libuchardet0_0.0.8-1+b1 libudev1_256.4-2 libunistring5_1.2-1 liburi-perl_5.28-1 libuuid1_2.40.2-4 libwww-perl_6.77-1 libwww-robotrules-perl_6.02-1 libxml2_2.12.7+dfsg-3+b1 libxxhash0_0.8.2-2+b1 libzstd1_1.5.6+dfsg-1 linux-libc-dev_6.10.3-1 locales-all_2.39-6 login_1:4.16.0-2+really2.40.2-4 login.defs_1:4.16.0-4 m4_1.4.19-4 make_4.3-4.1 man-db_2.12.1-2 mawk_1.3.4.20240622-2 ncurses-base_6.5-2 ncurses-bin_6.5-2 netbase_6.4 openssl_3.3.1-2 passwd_1:4.16.0-4 patch_2.7.6-7 perl_5.40.0-1 perl-base_5.40.0-1 perl-modules-5.38_5.38.2-5 perl-modules-5.40_5.40.0-1 perl-openssl-defaults_7+b2 pinentry-curses_1.2.1-3+b2 po-debconf_1.0.21+nmu1 readline-common_8.2-4 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.24 sysvinit-utils_3.09-2 tar_1.35+dfsg-3 usr-is-merged_39 util-linux_2.40.2-4 xz-utils_5.6.2-2 zlib1g_1:1.3.dfsg+really1.3.1-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libbio-db-refseq-perl Binary: libbio-db-refseq-perl Architecture: all Version: 1.7.4-1 Maintainer: Debian Med team Uploaders: Michael R. Crusoe Homepage: https://metacpan.org/release/Bio-DB-RefSeq Standards-Version: 4.4.1 Vcs-Browser: https://salsa.debian.org/med-team/libbio-db-refseq-perl Vcs-Git: https://salsa.debian.org/med-team/libbio-db-refseq-perl.git Testsuite: autopkgtest-pkg-perl Build-Depends: debhelper-compat (= 12) Build-Depends-Indep: libbio-perl-perl, libtest-most-perl, libhttp-message-perl, libwww-perl, libtest-requiresinternet-perl, libtest-needs-perl, perl Package-List: libbio-db-refseq-perl deb perl optional arch=all Checksums-Sha1: 3f19baaa6b61630152b8d4973ed32adb720cc786 13741 libbio-db-refseq-perl_1.7.4.orig.tar.gz 948494d6b42f99345b70c851456859c0d370a6b5 1892 libbio-db-refseq-perl_1.7.4-1.debian.tar.xz Checksums-Sha256: f3f4e44827cc86af9c2486c63935474951fde7f8647d2edc0c3a18c23640feab 13741 libbio-db-refseq-perl_1.7.4.orig.tar.gz cade30ba7e2d7005785024f00a87e56f3b0606695e032e2ec318c5019497a28d 1892 libbio-db-refseq-perl_1.7.4-1.debian.tar.xz Files: 0cfdbfd77e868e39387a7014094b9d58 13741 libbio-db-refseq-perl_1.7.4.orig.tar.gz 0d15335c68c24d26635490cb815aec40 1892 libbio-db-refseq-perl_1.7.4-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAl4KXO4ACgkQPCZ2P2xn 5uJCOBAAyR1HV0uoqPcQZ32SE26nNwYn2CxL+Hj9oNMHfk9Ym+Pym/Hr+mBkLNZ0 3XMzXug8g46SDV8YFXUuH+HzclHZcjL1Aw8JXBBl2/iK2mnTFoZ83+I6Ts/FuR4X 3D5yOzCGRhECKh8ikzdBoyL6il8uSu5TP5pasSuABO1CdNVqV9m2g0WDyHSKK6NF HG5v6FUR1Jevp8tw6ozPf4frQyVm88wu+7tA/RYGL4YAk6+nvOWxS91hRHHbkzPH kq5m8rs+sngntv4luv00qjiv6RgN/rPw3jz6Fgxm/AFgppLOUd+/eVOMlRWVKJGX G2M/H5dDjlWWKhj54woaEybU5IAiqFHPeT4sGTWUhZO701+icdzRs+M6UmOTW09R 6i/Ip5YNwIQ+PVSXVOdPyRsDPAd3VPDfdYG9osQMdrCJhn4bFfRTtWJpZpTo6ojJ T7eSg35O28iSUu7/GQU2tPuZNFCrLcdMIihQzmdSjjGa2lidPfG3d73twUioA6bn pUK92yOYmHl7G2TdjCnAlCN1ZPsv4eLRM23KjResS/GJdhNZYO+hhKflGup4yhE+ SyqFPLCuXqjK92fpsMgT7EGMIju2yCM2cXPznO9IMmqskJo2bWzwjumUaKLgWBHz Vibo8kp7ob4a50uOiH5qC2GRw4zNm11WKnAOXWd1eZeqsipK79U= =z3fE -----END PGP SIGNATURE----- gpgv: Signature made Mon Dec 30 20:24:14 2019 UTC gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libbio-db-refseq-perl_1.7.4-1.dsc: no acceptable signature found dpkg-source: info: extracting libbio-db-refseq-perl in /<> dpkg-source: info: unpacking libbio-db-refseq-perl_1.7.4.orig.tar.gz dpkg-source: info: unpacking libbio-db-refseq-perl_1.7.4-1.debian.tar.xz Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Timed Build Commands | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/starting-build-commands/no-network libbio-db-refseq-perl_1.7.4-1 perl-5.40-throwaway amd64 ------------------------------------------------------------------------------------------------------------------------------ I: Finished running '/usr/share/debomatic/sbuildcommands/starting-build-commands/no-network libbio-db-refseq-perl_1.7.4-1 perl-5.40-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_GB.UTF-8 LANGUAGE=en_GB:en LC_ALL=C.UTF-8 LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so LOGNAME=debomatic PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/<> SCHROOT_ALIAS_NAME=perl-5.40-throwaway-amd64-debomatic SCHROOT_CHROOT_NAME=perl-5.40-amd64-debomatic SCHROOT_COMMAND=env SCHROOT_GID=110 SCHROOT_GROUP=sbuild SCHROOT_SESSION_ID=perl-5.40-amd64-debomatic-1afbc5b5-cf4f-4e87-9d6a-19e3b0153093 SCHROOT_UID=1002 SCHROOT_USER=debomatic SHELL=/bin/sh USER=debomatic dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -Zxz dpkg-buildpackage: info: source package libbio-db-refseq-perl dpkg-buildpackage: info: source version 1.7.4-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source -Zxz --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean dh_clean dpkg-source -Zxz -b . dpkg-source: info: using source format '3.0 (quilt)' dpkg-source: info: building libbio-db-refseq-perl using existing ./libbio-db-refseq-perl_1.7.4.orig.tar.gz dpkg-source: info: building libbio-db-refseq-perl in libbio-db-refseq-perl_1.7.4-1.debian.tar.xz dpkg-source: info: building libbio-db-refseq-perl in libbio-db-refseq-perl_1.7.4-1.dsc debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2" "LD=x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro" Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Bio::DB::RefSeq Writing MYMETA.yml and MYMETA.json dh_auto_build make -j2 make[1]: Entering directory '/<>' cp lib/Bio/DB/RefSeq.pm blib/lib/Bio/DB/RefSeq.pm Manifying 1 pod document make[1]: Leaving directory '/<>' dh_auto_test make -j2 test TEST_VERBOSE=1 make[1]: Entering directory '/<>' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/00-compile.t ........... 1..1 ok 1 - Bio/DB/RefSeq.pm loaded ok ok t/author-mojibake.t ...... skipped: these tests are for testing by the author t/author-pod-coverage.t .. skipped: these tests are for testing by the author t/author-pod-syntax.t .... skipped: these tests are for testing by the author t/RefSeq.t ............... ok 1 ok 2 ok 3 ok 4 ok 5 ok 6 1..6 ok All tests successful. Files=5, Tests=7, 2 wallclock secs ( 0.02 usr 0.01 sys + 0.30 cusr 0.06 csys = 0.39 CPU) Result: PASS make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install --destdir=debian/libbio-db-refseq-perl/ make -j2 install DESTDIR=/<>/debian/libbio-db-refseq-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/<>' Manifying 1 pod document Installing /<>/debian/libbio-db-refseq-perl/usr/share/perl5/Bio/DB/RefSeq.pm Installing /<>/debian/libbio-db-refseq-perl/usr/share/man/man3/Bio::DB::RefSeq.3pm make[1]: Leaving directory '/<>' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libbio-db-refseq-perl' in '../libbio-db-refseq-perl_1.7.4-1_all.deb'. dpkg-genbuildinfo -O../libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo dpkg-genchanges -O../libbio-db-refseq-perl_1.7.4-1_amd64.changes dpkg-genchanges: info: including full source code in upload dpkg-source -Zxz --after-build . dpkg-buildpackage: info: full upload (original source is included) -------------------------------------------------------------------------------- Build finished at 2024-08-06T13:08:41Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libbio-db-refseq-perl_1.7.4-1_amd64.changes: -------------------------------------------- Format: 1.8 Date: Mon, 30 Dec 2019 21:21:28 +0100 Source: libbio-db-refseq-perl Binary: libbio-db-refseq-perl Architecture: source all Version: 1.7.4-1 Distribution: perl-5.40-throwaway Urgency: medium Maintainer: Debian Med team Changed-By: Michael R. Crusoe Description: libbio-db-refseq-perl - Database object interface for RefSeq retrieval Changes: libbio-db-refseq-perl (1.7.4-1) unstable; urgency=medium . * New upstream version Checksums-Sha1: c67323107a14666a342c4a3cc28031fab7337361 1339 libbio-db-refseq-perl_1.7.4-1.dsc 3f19baaa6b61630152b8d4973ed32adb720cc786 13741 libbio-db-refseq-perl_1.7.4.orig.tar.gz 32ecf09f3a8f3077a8510277dbec1e401ba35f88 1900 libbio-db-refseq-perl_1.7.4-1.debian.tar.xz dabcbaf6a377088ecf0eec0617aeee69925cc6c6 7268 libbio-db-refseq-perl_1.7.4-1_all.deb c255b7ecf30a30cb72d3dfb61b9a633f7c96c9fc 6442 libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo Checksums-Sha256: 7ca91f53098091ca5fe2423207465a2a8ff794c72df4e5651fe87a5d011c8a30 1339 libbio-db-refseq-perl_1.7.4-1.dsc f3f4e44827cc86af9c2486c63935474951fde7f8647d2edc0c3a18c23640feab 13741 libbio-db-refseq-perl_1.7.4.orig.tar.gz b6f73c60d76e7ef2ff3d5546e3e027634f52c9cc21947cc524e2612bc4c7594f 1900 libbio-db-refseq-perl_1.7.4-1.debian.tar.xz a20c3a17ce3a84dd12a6f1b2965265ebffaa94fe7ce6aa36657de380fd854666 7268 libbio-db-refseq-perl_1.7.4-1_all.deb 5bedaaea3d341026bc9fc505fdbd87ee33b24eb0bf43ed2380129870ecde0410 6442 libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo Files: 59952cdccff7baabbf5cc18ac11b98e4 1339 perl optional libbio-db-refseq-perl_1.7.4-1.dsc 0cfdbfd77e868e39387a7014094b9d58 13741 perl optional libbio-db-refseq-perl_1.7.4.orig.tar.gz da984b094784c7f0b5696858d90a8a57 1900 perl optional libbio-db-refseq-perl_1.7.4-1.debian.tar.xz 6652298c466b44165250bd65b2ecccf0 7268 perl optional libbio-db-refseq-perl_1.7.4-1_all.deb a354f2a3f1b7dd5bb3239edaedf9332f 6442 perl optional libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: libbio-db-refseq-perl Binary: libbio-db-refseq-perl Architecture: all source Version: 1.7.4-1 Checksums-Md5: 59952cdccff7baabbf5cc18ac11b98e4 1339 libbio-db-refseq-perl_1.7.4-1.dsc 6652298c466b44165250bd65b2ecccf0 7268 libbio-db-refseq-perl_1.7.4-1_all.deb Checksums-Sha1: c67323107a14666a342c4a3cc28031fab7337361 1339 libbio-db-refseq-perl_1.7.4-1.dsc dabcbaf6a377088ecf0eec0617aeee69925cc6c6 7268 libbio-db-refseq-perl_1.7.4-1_all.deb Checksums-Sha256: 7ca91f53098091ca5fe2423207465a2a8ff794c72df4e5651fe87a5d011c8a30 1339 libbio-db-refseq-perl_1.7.4-1.dsc a20c3a17ce3a84dd12a6f1b2965265ebffaa94fe7ce6aa36657de380fd854666 7268 libbio-db-refseq-perl_1.7.4-1_all.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Tue, 06 Aug 2024 13:08:41 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.22.5-2), autotools-dev (= 20220109.1), base-files (= 13.5), base-passwd (= 3.6.4), bash (= 5.2.21-2.1), binutils (= 2.43-1), binutils-common (= 2.43-1), binutils-x86-64-linux-gnu (= 2.43-1), bsdextrautils (= 2.40.2-4), bsdutils (= 1:2.40.2-4), build-essential (= 12.10), bzip2 (= 1.0.8-5.1), ca-certificates (= 20240203), coreutils (= 9.4-3.1), cpp (= 4:14.1.0-2), cpp-13 (= 13.3.0-5), cpp-13-x86-64-linux-gnu (= 13.3.0-5), cpp-14 (= 14.2.0-1), cpp-14-x86-64-linux-gnu (= 14.2.0-1), cpp-x86-64-linux-gnu (= 4:14.1.0-2), dash (= 0.5.12-9), debconf (= 1.5.87), debhelper (= 13.16), debianutils (= 5.20), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.0-1), diffutils (= 1:3.10-1), dpkg (= 1.22.11), dpkg-dev (= 1.22.11), dwz (= 0.15-1+b1), file (= 1:5.45-3), findutils (= 4.10.0-2), g++ (= 4:14.1.0-2), g++-14 (= 14.2.0-1), g++-14-x86-64-linux-gnu (= 14.2.0-1), g++-x86-64-linux-gnu (= 4:14.1.0-2), gcc (= 4:14.1.0-2), gcc-13 (= 13.3.0-5), gcc-13-base (= 13.3.0-5), gcc-13-x86-64-linux-gnu (= 13.3.0-5), gcc-14 (= 14.2.0-1), gcc-14-base (= 14.2.0-1), gcc-14-x86-64-linux-gnu (= 14.2.0-1), gcc-x86-64-linux-gnu (= 4:14.1.0-2), gettext (= 0.22.5-2), gettext-base (= 0.22.5-2), grep (= 3.11-4), groff-base (= 1.23.0-5), gzip (= 1.12-1.1), hostname (= 3.23+nmu2), init-system-helpers (= 1.66), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-2), libalgorithm-diff-perl (= 1.201-1), libarchive-zip-perl (= 1.68-1), libasan8 (= 14.2.0-1), libatomic1 (= 14.2.0-1), libattr1 (= 1:2.5.2-1), libaudit-common (= 1:3.1.2-4), libaudit1 (= 1:3.1.2-4+b1), libbinutils (= 2.43-1), libbio-perl-perl (= 1.7.8-1), libblkid1 (= 2.40.2-4), libbz2-1.0 (= 1.0.8-5.1), libc-bin (= 2.39-6), libc-dev-bin (= 2.39-6), libc6 (= 2.39-6), libc6-dev (= 2.39-6), libcap-ng0 (= 0.8.5-1+b1), libcap2 (= 1:2.66-5), libcapture-tiny-perl (= 0.48-2), libcc1-0 (= 14.2.0-1), libclass-data-inheritable-perl (= 0.08-3), libclone-perl (= 0.46-1+b3), libcrypt-dev (= 1:4.4.36-4), libcrypt1 (= 1:4.4.36-4), libctf-nobfd0 (= 2.43-1), libctf0 (= 2.43-1), libdata-stag-perl (= 0.14-3), libdb5.3t64 (= 5.3.28+dfsg2-7), libdebconfclient0 (= 0.272), libdebhelper-perl (= 13.16), libdevel-stacktrace-perl (= 2.0500-1), libdpkg-perl (= 1.22.11), libelf1t64 (= 0.191-2), libencode-locale-perl (= 1.05-3), libexception-class-perl (= 1.45-1), libfile-listing-perl (= 6.16-1), libfile-stripnondeterminism-perl (= 1.14.0-1), libgcc-13-dev (= 13.3.0-5), libgcc-14-dev (= 14.2.0-1), libgcc-s1 (= 14.2.0-1), libgdbm-compat4t64 (= 1.23-6), libgdbm6t64 (= 1.23-6), libgmp10 (= 2:6.3.0+dfsg-2+b1), libgomp1 (= 14.2.0-1), libgprofng0 (= 2.43-1), libhtml-parser-perl (= 3.83-1+b1), libhtml-tagset-perl (= 3.24-1), libhtml-tree-perl (= 5.07-3), libhttp-cookies-perl (= 6.11-1), libhttp-date-perl (= 6.06-1), libhttp-message-perl (= 6.46-1), libhttp-negotiate-perl (= 6.01-2), libhwasan0 (= 14.2.0-1), libicu72 (= 72.1-5), libio-html-perl (= 1.004-3), libio-socket-ssl-perl (= 2.088-1), libio-string-perl (= 1.08-4), libisl23 (= 0.26-3+b2), libitm1 (= 14.2.0-1), libjansson4 (= 2.14-2+b2), liblsan0 (= 14.2.0-1), liblwp-mediatypes-perl (= 6.04-2), liblwp-protocol-https-perl (= 6.14-1), liblzma5 (= 5.6.2-2), libmagic-mgc (= 1:5.45-3), libmagic1t64 (= 1:5.45-3), libmd0 (= 1.1.0-2), libmount1 (= 2.40.2-4), libmpc3 (= 1.3.1-1+b2), libmpfr6 (= 4.2.1-1+b1), libnet-http-perl (= 6.23-1), libnet-ssleay-perl (= 1.94-1+b2), libpam-modules (= 1.5.3-7), libpam-modules-bin (= 1.5.3-7), libpam-runtime (= 1.5.3-7), libpam0g (= 1.5.3-7), libpcre2-8-0 (= 10.42-4+b1), libperl5.40 (= 5.40.0-1), libpipeline1 (= 1.5.7-2), libquadmath0 (= 14.2.0-1), libseccomp2 (= 2.5.5-1+b1), libselinux1 (= 3.5-2+b3), libsframe1 (= 2.43-1), libsmartcols1 (= 2.40.2-4), libssl3t64 (= 3.3.1-2), libstdc++-14-dev (= 14.2.0-1), libstdc++6 (= 14.2.0-1), libsub-uplevel-perl (= 0.2800-3), libsystemd0 (= 256.4-2), libtest-deep-perl (= 1.204-1), libtest-differences-perl (= 0.71-1), libtest-exception-perl (= 0.43-3), libtest-most-perl (= 0.38-1), libtest-needs-perl (= 0.002010-1), libtest-requiresinternet-perl (= 0.05-4), libtest-warn-perl (= 0.37-2), libtext-diff-perl (= 1.45-2), libtimedate-perl (= 2.3300-2), libtinfo6 (= 6.5-2), libtool (= 2.4.7-7), libtry-tiny-perl (= 0.31-2), libtsan2 (= 14.2.0-1), libubsan1 (= 14.2.0-1), libuchardet0 (= 0.0.8-1+b1), libudev1 (= 256.4-2), libunistring5 (= 1.2-1), liburi-perl (= 5.28-1), libuuid1 (= 2.40.2-4), libwww-perl (= 6.77-1), libwww-robotrules-perl (= 6.02-1), libxml2 (= 2.12.7+dfsg-3+b1), libzstd1 (= 1.5.6+dfsg-1), linux-libc-dev (= 6.10.3-1), m4 (= 1.4.19-4), make (= 4.3-4.1), man-db (= 2.12.1-2), mawk (= 1.3.4.20240622-2), ncurses-base (= 6.5-2), ncurses-bin (= 6.5-2), netbase (= 6.4), openssl (= 3.3.1-2), patch (= 2.7.6-7), perl (= 5.40.0-1), perl-base (= 5.40.0-1), perl-modules-5.40 (= 5.40.0-1), perl-openssl-defaults (= 7+b2), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.24), sysvinit-utils (= 3.09-2), tar (= 1.35+dfsg-3), usr-is-merged (= 39), util-linux (= 2.40.2-4), xz-utils (= 5.6.2-2), zlib1g (= 1:1.3.dfsg+really1.3.1-1) Environment: DEB_BUILD_OPTIONS="parallel=2" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" LD_LIBRARY_PATH="/usr/lib/libeatmydata" SOURCE_DATE_EPOCH="1577737288" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libbio-db-refseq-perl_1.7.4-1_all.deb ------------------------------------- new Debian package, version 2.0. size 7268 bytes: control archive=1020 bytes. 1004 bytes, 25 lines control 396 bytes, 5 lines md5sums Package: libbio-db-refseq-perl Version: 1.7.4-1 Architecture: all Maintainer: Debian Med team Installed-Size: 23 Depends: perl:any, libhttp-message-perl, libwww-perl, libbio-perl-perl Breaks: libbio-perl-perl (<< 1.7.3) Replaces: libbio-perl-perl (<< 1.7.3) Section: perl Priority: optional Homepage: https://metacpan.org/release/Bio-DB-RefSeq Description: Database object interface for RefSeq retrieval Allows the dynamic retrieval of sequence objects Bio::Seq from the RefSeq nucleotide database using the dbfetch script at EBI: . http://www.ebi.ac.uk/Tools/dbfetch/dbfetch . At this time the module specifically retrieves nucleotide sequences only. . In order to make changes transparent host type (currently only ebi) and location (defaults to ebi) were separated out. This allows later additions of more servers in different geographical locations. . The functionality of this module is inherited from Bio::DB::DBFetch which implements Bio::DB::WebDBSeqI. drwxr-xr-x root/root 0 2019-12-30 20:21 ./ drwxr-xr-x root/root 0 2019-12-30 20:21 ./usr/ drwxr-xr-x root/root 0 2019-12-30 20:21 ./usr/share/ drwxr-xr-x root/root 0 2019-12-30 20:21 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-12-30 20:21 ./usr/share/doc/libbio-db-refseq-perl/ -rw-r--r-- root/root 276 2019-12-30 20:21 ./usr/share/doc/libbio-db-refseq-perl/changelog.Debian.gz -rw-r--r-- root/root 282 2019-12-07 22:09 ./usr/share/doc/libbio-db-refseq-perl/changelog.gz -rw-r--r-- root/root 1156 2019-12-30 20:21 ./usr/share/doc/libbio-db-refseq-perl/copyright drwxr-xr-x root/root 0 2019-12-30 20:21 ./usr/share/man/ drwxr-xr-x root/root 0 2019-12-30 20:21 ./usr/share/man/man3/ -rw-r--r-- root/root 2400 2019-12-30 20:21 ./usr/share/man/man3/Bio::DB::RefSeq.3pm.gz drwxr-xr-x root/root 0 2019-12-30 20:21 ./usr/share/perl5/ drwxr-xr-x root/root 0 2019-12-30 20:21 ./usr/share/perl5/Bio/ drwxr-xr-x root/root 0 2019-12-30 20:21 ./usr/share/perl5/Bio/DB/ -rw-r--r-- root/root 4747 2019-12-07 22:09 ./usr/share/perl5/Bio/DB/RefSeq.pm +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: full Build-Space: 440 Build-Time: 4 Distribution: perl-5.40-throwaway Host Architecture: amd64 Install-Time: 8 Job: /srv/debomatic/incoming/libbio-db-refseq-perl_1.7.4-1.dsc Machine Architecture: amd64 Package: libbio-db-refseq-perl Package-Time: 25 Source-Version: 1.7.4-1 Space: 440 Status: successful Version: 1.7.4-1 -------------------------------------------------------------------------------- Finished at 2024-08-06T13:08:41Z Build needed 00:00:25, 440k disk space