sbuild (Debian sbuild) 0.88.2 (16 January 2025) on carme.larted.org.uk +==============================================================================+ | fastqc 0.12.1+dfsg-4 (amd64) Mon, 20 Jan 2025 23:08:44 +0000 | +==============================================================================+ Package: fastqc Version: 0.12.1+dfsg-4 Source Version: 0.12.1+dfsg-4 Distribution: perl-5.40-throwaway Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: full I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... +------------------------------------------------------------------------------+ | Chroot Setup Commands Mon, 20 Jan 2025 23:08:45 +0000 | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup fastqc_0.12.1+dfsg-4 perl-5.40-throwaway amd64 --------------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup fastqc_0.12.1+dfsg-4 perl-5.40-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- I: Setting up apt archive... +------------------------------------------------------------------------------+ | Update chroot Mon, 20 Jan 2025 23:08:45 +0000 | +------------------------------------------------------------------------------+ Get:1 file:/srv/reprepro perl-5.40 InRelease [3030 B] Get:2 http://deb.debian.org/debian unstable InRelease [205 kB] Get:3 http://localhost:3142/debian sid InRelease [205 kB] Get:1 file:/srv/reprepro perl-5.40 InRelease [3030 B] Get:4 http://deb.debian.org/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:5 http://deb.debian.org/debian unstable/main amd64 Packages T-2025-01-20-2014.44-F-2025-01-20-0805.29.pdiff [56.8 kB] Get:6 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:5 http://deb.debian.org/debian unstable/main amd64 Packages T-2025-01-20-2014.44-F-2025-01-20-0805.29.pdiff [56.8 kB] Get:7 file:/srv/reprepro perl-5.40/main amd64 Packages [8875 B] Get:8 http://localhost:3142/debian sid/main Sources T-2025-01-20-2014.44-F-2025-01-20-0805.29.pdiff [52.8 kB] Get:8 http://localhost:3142/debian sid/main Sources T-2025-01-20-2014.44-F-2025-01-20-0805.29.pdiff [52.8 kB] Fetched 647 kB in 4s (174 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files Mon, 20 Jan 2025 23:08:52 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/debomatic/incoming/fastqc_0.12.1+dfsg-4.dsc exists in /srv/debomatic/incoming; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Mon, 20 Jan 2025 23:08:52 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), javahelper, default-jdk, ant, libhtsjdk-java, libjbzip2-java, libcommons-math3-java, build-essential Filtered Build-Depends: debhelper-compat (= 13), javahelper, default-jdk, ant, libhtsjdk-java, libjbzip2-java, libcommons-math3-java, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/fastqc-DdbkjU/resolver-I6PEoU/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/build/fastqc-DdbkjU/resolver-I6PEoU/apt_archive ./ InRelease Get:2 copy:/build/fastqc-DdbkjU/resolver-I6PEoU/apt_archive ./ Release [609 B] Ign:3 copy:/build/fastqc-DdbkjU/resolver-I6PEoU/apt_archive ./ Release.gpg Get:4 copy:/build/fastqc-DdbkjU/resolver-I6PEoU/apt_archive ./ Sources [685 B] Get:5 copy:/build/fastqc-DdbkjU/resolver-I6PEoU/apt_archive ./ Packages [724 B] Fetched 2018 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: adwaita-icon-theme ant at-spi2-common autoconf automake autopoint autotools-dev binfmt-support bsdextrautils ca-certificates ca-certificates-java dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service dctrl-tools debhelper default-jdk default-jdk-headless default-jre default-jre-headless devscripts dh-autoreconf dh-strip-nondeterminism dwz fastjar file fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono gettext gettext-base groff-base gtk-update-icon-cache hicolor-icon-theme intltool-debian jarwrapper java-common javahelper junit4 libapache-pom-java libapparmor1 libarchive-zip-perl libasound2-data libasound2t64 libatk-bridge2.0-0t64 libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3 libavahi-common-data libavahi-common3 libb-hooks-op-check-perl libbrotli1 libcairo-gobject2 libcairo2 libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcloudproviders0 libcolord2 libcom-err2 libcommons-beanutils-java libcommons-codec-java libcommons-collections3-java libcommons-collections4-java libcommons-compress-java libcommons-io-java libcommons-jexl2-java libcommons-lang3-java libcommons-logging-java libcommons-math3-java libcommons-parent-java libcups2t64 libdatrie1 libdbus-1-3 libdconf1 libdebhelper-perl libdeflate0 libdevel-callchecker-perl libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-radeon1 libdrm2 libdynaloader-functions-perl libedit2 libelf1t64 libencode-locale-perl libepoxy0 libexpat1 libezmorph-java libfile-dirlist-perl libfile-homedir-perl libfile-listing-perl libfile-stripnondeterminism-perl libfile-touch-perl libfile-which-perl libfontconfig1 libfreetype6 libfribidi0 libgbm1 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgif7 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0t64 libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 libgssapi-krb5-2 libgtk-3-0t64 libgtk-3-common libhamcrest-java libharfbuzz0b libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhtsjdk-java libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu72 libimport-into-perl libio-html-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libjaxen-java libjbig0 libjbzip2-java libjpeg62-turbo libjson-java libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblcms2-2 liblerc4 libllvm19 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1t64 libmbedcrypto16 libmbedtls21 libmbedx509-7 libmodule-runtime-perl libmoo-perl libncbi-ngs3 libncbi-vdb3 libnet-http-perl libnet-ssleay-perl libngs-java libngs-jni libnspr4 libnss3 libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libparams-classify-perl libpciaccess0 libpcsclite1 libpipeline1 libpixman-1-0 libpng16-16t64 libproc2-0 libpython3-stdlib libpython3.13-minimal libpython3.13-stdlib librhino-java librole-tiny-perl libsensors-config libsensors5 libsharpyuv0 libslf4j-java libsnappy-java libsnappy-jni libsnappy1v5 libsub-quote-perl libsystemd-shared libthai-data libthai0 libtiff6 libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libvulkan1 libwayland-client0 libwayland-cursor0 libwayland-egl1 libwayland-server0 libwebp7 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxerces2-java libxext6 libxfixes3 libxi6 libxinerama1 libxkbcommon0 libxml-commons-external-java libxml-commons-resolver1.1-java libxml2 libxom-java libxrandr2 libxrender1 libxshmfence1 libxtst6 libxxf86vm1 libz3-4 m4 man-db media-types mesa-libgallium mount ncbi-vdb-data netbase openjdk-21-jdk openjdk-21-jdk-headless openjdk-21-jre openjdk-21-jre-headless openssl patchutils perl-openssl-defaults po-debconf procps python3 python3-minimal python3.13 python3.13-minimal sensible-utils shared-mime-info systemd systemd-sysv tzdata wdiff x11-common xkb-data Suggested packages: adwaita-icon-theme-legacy ant-doc autoconf-archive gnu-standards autoconf-doc debtags dh-make adequate at autopkgtest bls-standalone bsd-mailx | mailx check-all-the-things diffoscope disorderfs docker.io dose-extra duck elpa-devscripts faketime gnuplot how-can-i-help libauthen-sasl-perl libdbd-pg-perl libterm-size-perl libyaml-syck-perl mmdebstrap mutt piuparts postgresql-client pristine-lfs python3-debianbts python3-pycurl quilt ratt reprotest ssh-client svn-buildpackage w3m gettext-doc libasprintf-dev libgettextpo-dev groff alsa-utils libasound2-plugins colord libcommons-collections3-java-doc libcommons-collections4-java-doc libasm-java libxz-java libavalon-framework-java libexcalibur-logkit-java liblog4j1.2-java cups-common low-memory-monitor krb5-doc krb5-user gvfs libdata-dump-perl picard-tools libdom4j-java libjdom1-java liblcms2-utils libcrypt-ssleay-perl libngs-java-doc libcryptsetup12 libtss2-rc0t64 libscalar-number-perl pciutils pcscd rhino lm-sensors libarchive13t64 libbpf1 libdw1t64 libfido2-1 libip4tc2 libpwquality1 libqrencode4 libtool-doc gfortran | fortran95-compiler gcj-jdk libsub-name-perl libbusiness-isbn-perl libmime-base32-perl libregexp-ipv6-perl libauthen-ntlm-perl libxerces2-java-doc libxml-commons-resolver1.1-java-doc libxom-java-doc m4-doc apparmor less www-browser nfs-common openjdk-21-demo openjdk-21-source visualvm libnss-mdns fonts-dejavu-extra fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic libmail-box-perl python3-doc python3-tk python3-venv python3.13-venv python3.13-doc systemd-container systemd-homed systemd-userdbd systemd-boot systemd-resolved systemd-repart libtss2-tcti-device0 polkitd wdiff-doc Recommended packages: librsvg2-common ant-optional dput | dupload libdistro-info-perl libgit-wrapper-perl libjson-perl liblist-compare-perl libstring-shellquote-perl licensecheck lintian python3-apt python3-debian python3-magic python3-requests python3-unidiff python3-xdg strace unzip wget | curl debian-keyring equivs libgitlab-api-v4-perl libsoap-lite-perl pristine-tar curl | wget | lynx alsa-ucm-conf alsa-topology-conf at-spi2-core libarchive-cpio-perl libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs libgtk-3-bin libhtml-format-perl libio-compress-brotli-perl krb5-locales libnamespace-clean-perl libxstring-perl libkmod2 libltdl-dev mesa-vulkan-drivers | vulkan-icd libdata-dump-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl libxt-dev libatk-wrapper-java-jni fonts-dejavu-extra libmail-sendmail-perl psmisc linux-sysctl-defaults systemd-timesyncd | time-daemon systemd-cryptsetup libnss-systemd The following NEW packages will be installed: adwaita-icon-theme ant at-spi2-common autoconf automake autopoint autotools-dev binfmt-support bsdextrautils ca-certificates ca-certificates-java dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service dctrl-tools debhelper default-jdk default-jdk-headless default-jre default-jre-headless devscripts dh-autoreconf dh-strip-nondeterminism dwz fastjar file fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono gettext gettext-base groff-base gtk-update-icon-cache hicolor-icon-theme intltool-debian jarwrapper java-common javahelper junit4 libapache-pom-java libapparmor1 libarchive-zip-perl libasound2-data libasound2t64 libatk-bridge2.0-0t64 libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3 libavahi-common-data libavahi-common3 libb-hooks-op-check-perl libbrotli1 libcairo-gobject2 libcairo2 libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcloudproviders0 libcolord2 libcom-err2 libcommons-beanutils-java libcommons-codec-java libcommons-collections3-java libcommons-collections4-java libcommons-compress-java libcommons-io-java libcommons-jexl2-java libcommons-lang3-java libcommons-logging-java libcommons-math3-java libcommons-parent-java libcups2t64 libdatrie1 libdbus-1-3 libdconf1 libdebhelper-perl libdeflate0 libdevel-callchecker-perl libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-radeon1 libdrm2 libdynaloader-functions-perl libedit2 libelf1t64 libencode-locale-perl libepoxy0 libexpat1 libezmorph-java libfile-dirlist-perl libfile-homedir-perl libfile-listing-perl libfile-stripnondeterminism-perl libfile-touch-perl libfile-which-perl libfontconfig1 libfreetype6 libfribidi0 libgbm1 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgif7 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0t64 libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 libgssapi-krb5-2 libgtk-3-0t64 libgtk-3-common libhamcrest-java libharfbuzz0b libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhtsjdk-java libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu72 libimport-into-perl libio-html-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libjaxen-java libjbig0 libjbzip2-java libjpeg62-turbo libjson-java libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblcms2-2 liblerc4 libllvm19 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1t64 libmbedcrypto16 libmbedtls21 libmbedx509-7 libmodule-runtime-perl libmoo-perl libncbi-ngs3 libncbi-vdb3 libnet-http-perl libnet-ssleay-perl libngs-java libngs-jni libnspr4 libnss3 libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libparams-classify-perl libpciaccess0 libpcsclite1 libpipeline1 libpixman-1-0 libpng16-16t64 libproc2-0 libpython3-stdlib libpython3.13-minimal libpython3.13-stdlib librhino-java librole-tiny-perl libsensors-config libsensors5 libsharpyuv0 libslf4j-java libsnappy-java libsnappy-jni libsnappy1v5 libsub-quote-perl libsystemd-shared libthai-data libthai0 libtiff6 libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libvulkan1 libwayland-client0 libwayland-cursor0 libwayland-egl1 libwayland-server0 libwebp7 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxerces2-java libxext6 libxfixes3 libxi6 libxinerama1 libxkbcommon0 libxml-commons-external-java libxml-commons-resolver1.1-java libxml2 libxom-java libxrandr2 libxrender1 libxshmfence1 libxtst6 libxxf86vm1 libz3-4 m4 man-db media-types mesa-libgallium mount ncbi-vdb-data netbase openjdk-21-jdk openjdk-21-jdk-headless openjdk-21-jre openjdk-21-jre-headless openssl patchutils perl-openssl-defaults po-debconf procps python3 python3-minimal python3.13 python3.13-minimal sbuild-build-depends-main-dummy sensible-utils shared-mime-info systemd systemd-sysv tzdata wdiff x11-common xkb-data 0 upgraded, 268 newly installed, 0 to remove and 0 not upgraded. Need to get 255 MB/255 MB of archives. After this operation, 780 MB of additional disk space will be used. Get:1 file:/srv/reprepro perl-5.40/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b5 [36.2 kB] Get:2 copy:/build/fastqc-DdbkjU/resolver-I6PEoU/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [900 B] Get:3 http://deb.debian.org/debian unstable/main amd64 mount amd64 2.40.4-1 [155 kB] Get:4 http://deb.debian.org/debian unstable/main amd64 libsystemd-shared amd64 257.2-2 [2138 kB] Get:5 http://deb.debian.org/debian unstable/main amd64 libapparmor1 amd64 3.1.7-1+b3 [42.1 kB] Get:6 http://deb.debian.org/debian unstable/main amd64 systemd amd64 257.2-2 [3092 kB] Get:7 http://deb.debian.org/debian unstable/main amd64 systemd-sysv amd64 257.2-2 [60.8 kB] Get:8 http://deb.debian.org/debian unstable/main amd64 libdbus-1-3 amd64 1.16.0-1 [177 kB] Get:9 http://deb.debian.org/debian unstable/main amd64 dbus-bin amd64 1.16.0-1 [78.9 kB] Get:10 http://deb.debian.org/debian unstable/main amd64 dbus-session-bus-common all 1.16.0-1 [51.1 kB] Get:11 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get:12 http://deb.debian.org/debian unstable/main amd64 dbus-daemon amd64 1.16.0-1 [157 kB] Get:13 http://deb.debian.org/debian unstable/main amd64 dbus-system-bus-common all 1.16.0-1 [52.2 kB] Get:14 http://deb.debian.org/debian unstable/main amd64 dbus amd64 1.16.0-1 [70.5 kB] Get:15 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:16 http://deb.debian.org/debian unstable/main amd64 binfmt-support amd64 2.2.2-7 [64.3 kB] Get:17 http://deb.debian.org/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.1-3 [858 kB] Get:18 http://deb.debian.org/debian unstable/main amd64 python3.13-minimal amd64 3.13.1-3 [2202 kB] Get:19 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.13.1-2 [27.0 kB] Get:20 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get:21 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get:22 http://deb.debian.org/debian unstable/main amd64 tzdata all 2025a-1 [259 kB] Get:23 http://deb.debian.org/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.1-3 [1973 kB] Get:24 http://deb.debian.org/debian unstable/main amd64 python3.13 amd64 3.13.1-3 [740 kB] Get:25 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.13.1-2 [9952 B] Get:26 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.13.1-2 [28.0 kB] Get:27 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB] Get:28 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-6 [879 kB] Get:29 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:30 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.4.0-2 [1422 kB] Get:31 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20241223 [164 kB] Get:32 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get:33 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get:34 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get:35 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.1-1 [243 kB] Get:36 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get:37 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-7 [1185 kB] Get:38 http://deb.debian.org/debian unstable/main amd64 libpam-systemd amd64 257.2-2 [293 kB] Get:39 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.4-1 [92.2 kB] Get:40 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get:41 http://deb.debian.org/debian unstable/main amd64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [311 kB] Get:42 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.82.4-2 [1502 kB] Get:43 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-6 [9421 kB] Get:44 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get:45 http://deb.debian.org/debian unstable/main amd64 shared-mime-info amd64 2.4-5+b1 [759 kB] Get:46 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3+b1 [168 kB] Get:47 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.45-1 [281 kB] Get:48 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.23-1+b1 [47.5 kB] Get:49 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Get:50 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Get:51 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [116 kB] Get:52 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.5.0-0.1 [318 kB] Get:53 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get:54 http://deb.debian.org/debian unstable/main amd64 libgdk-pixbuf-2.0-0 amd64 2.42.12+dfsg-1+b1 [141 kB] Get:55 http://deb.debian.org/debian unstable/main amd64 gtk-update-icon-cache amd64 4.16.12+ds-1 [50.6 kB] Get:56 http://deb.debian.org/debian unstable/main amd64 hicolor-icon-theme all 0.18-1 [12.0 kB] Get:57 http://deb.debian.org/debian unstable/main amd64 adwaita-icon-theme all 47.0-2 [463 kB] Get:58 http://deb.debian.org/debian unstable/main amd64 ca-certificates-java all 20240118 [11.6 kB] Get:59 http://deb.debian.org/debian unstable/main amd64 java-common all 0.76 [6776 B] Get:60 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get:61 http://deb.debian.org/debian unstable/main amd64 libnspr4 amd64 2:4.36-1 [110 kB] Get:62 http://deb.debian.org/debian unstable/main amd64 libnss3 amd64 2:3.107-1 [1390 kB] Get:63 http://deb.debian.org/debian unstable/main amd64 libpcsclite1 amd64 2.3.1-1 [56.0 kB] Get:64 http://deb.debian.org/debian unstable/main amd64 openjdk-21-jre-headless amd64 21.0.6~6ea-1 [41.8 MB] Get:65 http://deb.debian.org/debian unstable/main amd64 default-jre-headless amd64 2:1.21-76 [3192 B] Get:66 http://deb.debian.org/debian unstable/main amd64 ant all 1.10.15-1 [2163 kB] Get:67 http://deb.debian.org/debian unstable/main amd64 at-spi2-common all 2.55.0.1-1 [170 kB] Get:68 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-5 [294 kB] Get:69 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get:70 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:71 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:72 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.1-1 [770 kB] Get:73 http://deb.debian.org/debian unstable/main amd64 dbus-user-session amd64 1.16.0-1 [51.0 kB] Get:74 http://deb.debian.org/debian unstable/main amd64 libdconf1 amd64 0.40.0-5 [41.8 kB] Get:75 http://deb.debian.org/debian unstable/main amd64 dconf-service amd64 0.40.0-5 [32.4 kB] Get:76 http://deb.debian.org/debian unstable/main amd64 dconf-gsettings-backend amd64 0.40.0-5 [28.6 kB] Get:77 http://deb.debian.org/debian unstable/main amd64 dctrl-tools amd64 2.24-3+b1 [104 kB] Get:78 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.24.1 [90.9 kB] Get:79 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-2 [539 kB] Get:80 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:81 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:82 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get:83 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get:84 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get:85 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:86 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.1-1 [1680 kB] Get:87 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:88 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:89 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.24.1 [920 kB] Get:90 http://deb.debian.org/debian unstable/main amd64 libatk1.0-0t64 amd64 2.55.0.1-1 [51.5 kB] Get:91 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get:92 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] Get:93 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get:94 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.10-2 [337 kB] Get:95 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB] Get:96 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB] Get:97 http://deb.debian.org/debian unstable/main amd64 libxi6 amd64 2:1.8.2-1 [78.9 kB] Get:98 http://deb.debian.org/debian unstable/main amd64 libatspi2.0-0t64 amd64 2.55.0.1-1 [77.0 kB] Get:99 http://deb.debian.org/debian unstable/main amd64 libatk-bridge2.0-0t64 amd64 2.55.0.1-1 [68.1 kB] Get:100 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] Get:101 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get:102 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get:103 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get:104 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-2 [317 kB] Get:105 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-2 [391 kB] Get:106 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB] Get:107 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Get:108 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get:109 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b3 [27.8 kB] Get:110 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.2-2 [535 kB] Get:111 http://deb.debian.org/debian unstable/main amd64 libcairo-gobject2 amd64 1.18.2-2 [130 kB] Get:112 http://deb.debian.org/debian unstable/main amd64 libcloudproviders0 amd64 0.3.6-1+b1 [29.2 kB] Get:113 http://deb.debian.org/debian unstable/main amd64 libcolord2 amd64 1.4.7-1+b2 [140 kB] Get:114 http://deb.debian.org/debian unstable/main amd64 libavahi-common-data amd64 0.8-16 [112 kB] Get:115 http://deb.debian.org/debian unstable/main amd64 libavahi-common3 amd64 0.8-16 [44.2 kB] Get:116 http://deb.debian.org/debian unstable/main amd64 libavahi-client3 amd64 0.8-16 [48.4 kB] Get:117 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-4 [32.8 kB] Get:118 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.2-1 [24.0 kB] Get:119 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-4 [80.9 kB] Get:120 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get:121 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-4 [326 kB] Get:122 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-4 [138 kB] Get:123 http://deb.debian.org/debian unstable/main amd64 libcups2t64 amd64 2.4.10-2+b1 [251 kB] Get:124 http://deb.debian.org/debian unstable/main amd64 libepoxy0 amd64 1.5.10-2 [193 kB] Get:125 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.16-1 [26.5 kB] Get:126 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB] Get:127 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 10.2.0-1 [479 kB] Get:128 http://deb.debian.org/debian unstable/main amd64 fontconfig amd64 2.15.0-2 [463 kB] Get:129 http://deb.debian.org/debian unstable/main amd64 libthai-data all 0.1.29-2 [168 kB] Get:130 http://deb.debian.org/debian unstable/main amd64 libdatrie1 amd64 0.2.13-3+b1 [38.1 kB] Get:131 http://deb.debian.org/debian unstable/main amd64 libthai0 amd64 0.1.29-2+b1 [49.4 kB] Get:132 http://deb.debian.org/debian unstable/main amd64 libpango-1.0-0 amd64 1.56.1-1 [226 kB] Get:133 http://deb.debian.org/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.56.1-1 [55.3 kB] Get:134 http://deb.debian.org/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.56.1-1 [35.8 kB] Get:135 http://deb.debian.org/debian unstable/main amd64 libwayland-client0 amd64 1.23.0-1+b1 [26.6 kB] Get:136 http://deb.debian.org/debian unstable/main amd64 libwayland-cursor0 amd64 1.23.0-1+b1 [11.7 kB] Get:137 http://deb.debian.org/debian unstable/main amd64 libwayland-egl1 amd64 1.23.0-1+b1 [5664 B] Get:138 http://deb.debian.org/debian unstable/main amd64 libxcomposite1 amd64 1:0.4.6-1 [16.3 kB] Get:139 http://deb.debian.org/debian unstable/main amd64 libxfixes3 amd64 1:6.0.0-2+b3 [20.2 kB] Get:140 http://deb.debian.org/debian unstable/main amd64 libxcursor1 amd64 1:1.2.3-1 [39.7 kB] Get:141 http://deb.debian.org/debian unstable/main amd64 libxdamage1 amd64 1:1.1.6-1+b2 [15.5 kB] Get:142 http://deb.debian.org/debian unstable/main amd64 libxinerama1 amd64 2:1.1.4-3+b3 [16.0 kB] Get:143 http://deb.debian.org/debian unstable/main amd64 xkb-data all 2.42-1 [790 kB] Get:144 http://deb.debian.org/debian unstable/main amd64 libxkbcommon0 amd64 1.7.0-2 [113 kB] Get:145 http://deb.debian.org/debian unstable/main amd64 libxrandr2 amd64 2:1.5.4-1+b2 [36.4 kB] Get:146 http://deb.debian.org/debian unstable/main amd64 libgtk-3-common all 3.24.43-5 [4655 kB] Get:147 http://deb.debian.org/debian unstable/main amd64 libgtk-3-0t64 amd64 3.24.43-5 [2755 kB] Get:148 http://deb.debian.org/debian unstable/main amd64 libglvnd0 amd64 1.7.0-1+b2 [52.0 kB] Get:149 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.123-1 [8084 B] Get:150 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.123-1 [38.7 kB] Get:151 http://deb.debian.org/debian unstable/main amd64 libglapi-mesa amd64 24.3.3-1 [38.0 kB] Get:152 http://deb.debian.org/debian unstable/main amd64 libx11-xcb1 amd64 2:1.8.10-2 [241 kB] Get:153 http://deb.debian.org/debian unstable/main amd64 libxcb-dri3-0 amd64 1.17.0-2+b1 [107 kB] Get:154 http://deb.debian.org/debian unstable/main amd64 libxcb-glx0 amd64 1.17.0-2+b1 [122 kB] Get:155 http://deb.debian.org/debian unstable/main amd64 libxcb-present0 amd64 1.17.0-2+b1 [106 kB] Get:156 http://deb.debian.org/debian unstable/main amd64 libxcb-xfixes0 amd64 1.17.0-2+b1 [109 kB] Get:157 http://deb.debian.org/debian unstable/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b4 [19.3 kB] Get:158 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [22.3 kB] Get:159 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b3 [51.9 kB] Get:160 http://deb.debian.org/debian unstable/main amd64 libdrm-intel1 amd64 2.4.123-1 [63.7 kB] Get:161 http://deb.debian.org/debian unstable/main amd64 libdrm-radeon1 amd64 2.4.123-1 [22.3 kB] Get:162 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20250104-1 [93.8 kB] Get:163 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB] Get:164 http://deb.debian.org/debian unstable/main amd64 libllvm19 amd64 1:19.1.7-1 [26.0 MB] Get:165 http://deb.debian.org/debian unstable/main amd64 libsensors-config all 1:3.6.0-10 [14.6 kB] Get:166 http://deb.debian.org/debian unstable/main amd64 libsensors5 amd64 1:3.6.0-10+b1 [35.1 kB] Get:167 http://deb.debian.org/debian unstable/main amd64 libxcb-randr0 amd64 1.17.0-2+b1 [117 kB] Get:168 http://deb.debian.org/debian unstable/main amd64 libxcb-sync1 amd64 1.17.0-2+b1 [109 kB] Get:169 http://deb.debian.org/debian unstable/main amd64 libxshmfence1 amd64 1.3-1+b3 [8852 B] Get:170 http://deb.debian.org/debian unstable/main amd64 mesa-libgallium amd64 24.3.3-1 [9488 kB] Get:171 http://deb.debian.org/debian unstable/main amd64 libvulkan1 amd64 1.4.304.0-1 [129 kB] Get:172 http://deb.debian.org/debian unstable/main amd64 libwayland-server0 amd64 1.23.0-1+b1 [34.2 kB] Get:173 http://deb.debian.org/debian unstable/main amd64 libgbm1 amd64 24.3.3-1 [43.5 kB] Get:174 http://deb.debian.org/debian unstable/main amd64 libgl1-mesa-dri amd64 24.3.3-1 [44.9 kB] Get:175 http://deb.debian.org/debian unstable/main amd64 libglx-mesa0 amd64 24.3.3-1 [142 kB] Get:176 http://deb.debian.org/debian unstable/main amd64 libglx0 amd64 1.7.0-1+b2 [34.9 kB] Get:177 http://deb.debian.org/debian unstable/main amd64 libgl1 amd64 1.7.0-1+b2 [89.5 kB] Get:178 http://deb.debian.org/debian unstable/main amd64 libasound2-data all 1.2.13-1 [21.1 kB] Get:179 http://deb.debian.org/debian unstable/main amd64 libasound2t64 amd64 1.2.13-1+b1 [373 kB] Get:180 http://deb.debian.org/debian unstable/main amd64 libgif7 amd64 5.2.2-1+b1 [44.2 kB] Get:181 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+23.2 [216 kB] Get:182 http://deb.debian.org/debian unstable/main amd64 libxtst6 amd64 2:1.2.3-1.1+b3 [25.9 kB] Get:183 http://deb.debian.org/debian unstable/main amd64 openjdk-21-jre amd64 21.0.6~6ea-1 [204 kB] Get:184 http://deb.debian.org/debian unstable/main amd64 default-jre amd64 2:1.21-76 [1068 B] Get:185 http://deb.debian.org/debian unstable/main amd64 openjdk-21-jdk-headless amd64 21.0.6~6ea-1 [82.8 MB] Get:186 http://deb.debian.org/debian unstable/main amd64 default-jdk-headless amd64 2:1.21-76 [1124 B] Get:187 http://deb.debian.org/debian unstable/main amd64 openjdk-21-jdk amd64 21.0.6~6ea-1 [3938 kB] Get:188 http://deb.debian.org/debian unstable/main amd64 default-jdk amd64 2:1.21-76 [1076 B] Get:189 http://deb.debian.org/debian unstable/main amd64 libfile-dirlist-perl all 0.05-3 [7600 B] Get:190 http://deb.debian.org/debian unstable/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:191 http://deb.debian.org/debian unstable/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:192 http://deb.debian.org/debian unstable/main amd64 libfile-touch-perl all 0.12-2 [8816 B] Get:193 http://deb.debian.org/debian unstable/main amd64 libio-pty-perl amd64 1:1.20-1+b2 [34.3 kB] Get:194 http://deb.debian.org/debian unstable/main amd64 libipc-run-perl all 20231003.0-2 [101 kB] Get:195 http://deb.debian.org/debian unstable/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:196 http://deb.debian.org/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b2 [10.6 kB] Get:197 http://deb.debian.org/debian unstable/main amd64 libdynaloader-functions-perl all 0.004-1 [12.1 kB] Get:198 http://deb.debian.org/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.009-1+b1 [16.2 kB] Get:199 http://deb.debian.org/debian unstable/main amd64 libparams-classify-perl amd64 0.015-2+b4 [22.5 kB] Get:200 http://deb.debian.org/debian unstable/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:201 http://deb.debian.org/debian unstable/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:202 http://deb.debian.org/debian unstable/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:203 http://deb.debian.org/debian unstable/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:204 http://deb.debian.org/debian unstable/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:205 http://deb.debian.org/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:206 http://deb.debian.org/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:207 http://deb.debian.org/debian unstable/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:208 http://deb.debian.org/debian unstable/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:209 http://deb.debian.org/debian unstable/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:210 http://deb.debian.org/debian unstable/main amd64 liburi-perl all 5.30-1 [105 kB] Get:211 http://deb.debian.org/debian unstable/main amd64 libhtml-parser-perl amd64 3.83-1+b2 [99.7 kB] Get:212 http://deb.debian.org/debian unstable/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:213 http://deb.debian.org/debian unstable/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get:214 http://deb.debian.org/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:215 http://deb.debian.org/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:216 http://deb.debian.org/debian unstable/main amd64 libhttp-message-perl all 7.00-2 [79.8 kB] Get:217 http://deb.debian.org/debian unstable/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:218 http://deb.debian.org/debian unstable/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:219 http://deb.debian.org/debian unstable/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get:220 http://deb.debian.org/debian unstable/main amd64 libnet-ssleay-perl amd64 1.94-2 [339 kB] Get:221 http://deb.debian.org/debian unstable/main amd64 libio-socket-ssl-perl all 2.089-1 [223 kB] Get:222 http://deb.debian.org/debian unstable/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:223 http://deb.debian.org/debian unstable/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get:224 http://deb.debian.org/debian unstable/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get:225 http://deb.debian.org/debian unstable/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:226 http://deb.debian.org/debian unstable/main amd64 libwww-perl all 6.77-1 [183 kB] Get:227 http://deb.debian.org/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:228 http://deb.debian.org/debian unstable/main amd64 wdiff amd64 1.2.2-7 [122 kB] Get:229 http://deb.debian.org/debian unstable/main amd64 devscripts all 2.25.1 [1053 kB] Get:230 http://deb.debian.org/debian unstable/main amd64 fastjar amd64 2:0.98-7 [80.1 kB] Get:231 http://deb.debian.org/debian unstable/main amd64 jarwrapper all 0.80 [9692 B] Get:232 http://deb.debian.org/debian unstable/main amd64 javahelper all 0.80 [80.4 kB] Get:233 http://deb.debian.org/debian unstable/main amd64 libhamcrest-java all 2.2-2 [121 kB] Get:234 http://deb.debian.org/debian unstable/main amd64 junit4 all 4.13.2-5 [350 kB] Get:235 http://deb.debian.org/debian unstable/main amd64 libapache-pom-java all 33-2 [5852 B] Get:236 http://deb.debian.org/debian unstable/main amd64 libcommons-collections3-java all 3.2.2-3 [530 kB] Get:237 http://deb.debian.org/debian unstable/main amd64 libcommons-parent-java all 56-1 [10.8 kB] Get:238 http://deb.debian.org/debian unstable/main amd64 libcommons-logging-java all 1.3.0-1 [68.6 kB] Get:239 http://deb.debian.org/debian unstable/main amd64 libcommons-beanutils-java all 1.9.4-2 [233 kB] Get:240 http://deb.debian.org/debian unstable/main amd64 libcommons-codec-java all 1.17.1-1 [303 kB] Get:241 http://deb.debian.org/debian unstable/main amd64 libcommons-collections4-java all 4.4-2 [682 kB] Get:242 http://deb.debian.org/debian unstable/main amd64 libcommons-io-java all 2.17.0-1 [488 kB] Get:243 http://deb.debian.org/debian unstable/main amd64 libcommons-compress-java all 1.27.1-2 [641 kB] Get:244 http://deb.debian.org/debian unstable/main amd64 libcommons-jexl2-java all 2.1.1-6 [256 kB] Get:245 http://deb.debian.org/debian unstable/main amd64 libcommons-lang3-java all 3.17.0-1 [641 kB] Get:246 http://deb.debian.org/debian unstable/main amd64 libcommons-math3-java all 3.6.1-4 [2040 kB] Get:247 http://deb.debian.org/debian unstable/main amd64 libezmorph-java all 1.0.6-4 [75.9 kB] Get:248 http://deb.debian.org/debian unstable/main amd64 libslf4j-java all 1.7.32-1 [144 kB] Get:249 http://deb.debian.org/debian unstable/main amd64 libjaxen-java all 1.1.6-5 [214 kB] Get:250 http://deb.debian.org/debian unstable/main amd64 libxml-commons-external-java all 1.4.01-6 [240 kB] Get:251 http://deb.debian.org/debian unstable/main amd64 libxml-commons-resolver1.1-java all 1.2-11 [98.3 kB] Get:252 http://deb.debian.org/debian unstable/main amd64 libxerces2-java all 2.12.2-1 [1440 kB] Get:253 http://deb.debian.org/debian unstable/main amd64 libxom-java all 1.3.9-1 [174 kB] Get:254 http://deb.debian.org/debian unstable/main amd64 libjson-java all 3.1.0+dfsg-2 [142 kB] Get:255 http://deb.debian.org/debian unstable/main amd64 libmbedcrypto16 amd64 3.6.2-3 [355 kB] Get:256 http://deb.debian.org/debian unstable/main amd64 libmbedx509-7 amd64 3.6.2-3 [147 kB] Get:257 http://deb.debian.org/debian unstable/main amd64 libmbedtls21 amd64 3.6.2-3 [234 kB] Get:258 http://deb.debian.org/debian unstable/main amd64 ncbi-vdb-data all 3.0.9+dfsg-2 [74.0 kB] Get:259 http://deb.debian.org/debian unstable/main amd64 libncbi-vdb3 amd64 3.0.9+dfsg-2 [1189 kB] Get:260 http://deb.debian.org/debian unstable/main amd64 libncbi-ngs3 amd64 3.0.9+dfsg-7+b1 [157 kB] Get:261 http://deb.debian.org/debian unstable/main amd64 libngs-jni amd64 3.0.9+dfsg-7+b1 [25.8 kB] Get:262 http://deb.debian.org/debian unstable/main amd64 libngs-java amd64 3.0.9+dfsg-7+b1 [112 kB] Get:263 http://deb.debian.org/debian unstable/main amd64 librhino-java all 1.7.15-1 [1382 kB] Get:264 http://deb.debian.org/debian unstable/main amd64 libsnappy1v5 amd64 1.2.1-1+b1 [29.6 kB] Get:265 http://deb.debian.org/debian unstable/main amd64 libsnappy-jni amd64 1.1.10.7-1 [6492 B] Get:266 http://deb.debian.org/debian unstable/main amd64 libsnappy-java all 1.1.10.7-1 [87.6 kB] Get:267 http://deb.debian.org/debian unstable/main amd64 libhtsjdk-java all 4.1.3+dfsg-2 [1841 kB] Get:268 http://deb.debian.org/debian unstable/main amd64 libjbzip2-java all 0.9.1-8 [42.7 kB] Preconfiguring packages ... 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Created symlink '/etc/systemd/system/getty.target.wants/getty@tty1.service' → '/usr/lib/systemd/system/getty@.service'. Created symlink '/etc/systemd/system/multi-user.target.wants/remote-fs.target' → '/usr/lib/systemd/system/remote-fs.target'. Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-pstore.service' → '/usr/lib/systemd/system/systemd-pstore.service'. Initializing machine ID from random generator. /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. Selecting previously unselected package systemd-sysv. (Reading database ... 24026 files and directories currently installed.) Preparing to unpack .../00-systemd-sysv_257.2-2_amd64.deb ... Unpacking systemd-sysv (257.2-2) ... Selecting previously unselected package libdbus-1-3:amd64. Preparing to unpack .../01-libdbus-1-3_1.16.0-1_amd64.deb ... Unpacking libdbus-1-3:amd64 (1.16.0-1) ... Selecting previously unselected package dbus-bin. 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Setting up libnet-ssleay-perl:amd64 (1.94-2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libxcb-dri3-0:amd64 (1.17.0-2+b1) ... Setting up libllvm19:amd64 (1:19.1.7-1) ... Setting up libx11-xcb1:amd64 (2:1.8.10-2) ... Setting up libhttp-date-perl (6.06-1) ... Setting up gettext (0.23.1-1) ... Setting up libxdamage1:amd64 (1:1.1.6-1+b2) ... Setting up libatk1.0-0t64:amd64 (2.55.0.1-1) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libxrender1:amd64 (1:0.9.10-1.1+b3) ... Setting up jarwrapper (0.80) ... Setting up libtool (2.5.4-2) ... Setting up python3.13 (3.13.1-3) ... Setting up fontconfig-config (2.15.0-2) ... Setting up libcommons-parent-java (56-1) ... Setting up libavahi-common3:amd64 (0.8-16) ... Setting up libcloudproviders0:amd64 (0.3.6-1+b1) ... Setting up libcommons-logging-java (1.3.0-1) ... Setting up libxext6:amd64 (2:1.3.4-1+b3) ... Setting up libnet-http-perl (6.23-1) ... Setting up python3 (3.13.1-2) ... Setting up libnss3:amd64 (2:3.107-1) ... Setting up dbus-daemon (1.16.0-1) ... Setting up libxom-java (1.3.9-1) ... Setting up libdevel-callchecker-perl:amd64 (0.009-1+b1) ... Setting up libcolord2:amd64 (1.4.7-1+b2) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libdconf1:amd64 (0.40.0-5) ... Setting up dh-autoreconf (20) ... Setting up patchutils (0.4.2-1) ... Setting up libcommons-jexl2-java (2.1.1-6) ... Setting up libthai0:amd64 (0.1.29-2+b1) ... Setting up ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 152 added, 0 removed; done. Setting up libmbedx509-7:amd64 (3.6.2-3) ... Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up libxfixes3:amd64 (1:6.0.0-2+b3) ... Setting up dbus (1.16.0-1) ... Running in chroot, ignoring request. Setting up shared-mime-info (2.4-5+b1) ... Setting up libxinerama1:amd64 (2:1.1.4-3+b3) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-4) ... Setting up libxrandr2:amd64 (2:1.5.4-1+b2) ... Setting up libcommons-collections4-java (4.4-2) ... Setting up libcommons-lang3-java (3.17.0-1) ... Setting up libmbedtls21:amd64 (3.6.2-3) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libdrm2:amd64 (2.4.123-1) ... Setting up groff-base (1.23.0-7) ... Setting up libwayland-cursor0:amd64 (1.23.0-1+b1) ... Setting up libhtml-parser-perl:amd64 (3.83-1+b2) ... Setting up libpam-systemd:amd64 (257.2-2) ... Setting up libcommons-beanutils-java (1.9.4-2) ... Setting up libharfbuzz0b:amd64 (10.2.0-1) ... Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1+b1) ... Setting up libsnappy-java (1.1.10.7-1) ... Setting up libfontconfig1:amd64 (2.15.0-2) ... Setting up ca-certificates-java (20240118) ... No JRE found. Skipping Java certificates setup. Setting up libcommons-codec-java (1.17.1-1) ... Setting up libavahi-client3:amd64 (0.8-16) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libdrm-amdgpu1:amd64 (2.4.123-1) ... Setting up gtk-update-icon-cache (4.16.12+ds-1) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up fontconfig (2.15.0-2) ... Regenerating fonts cache... done. Setting up openjdk-21-jre-headless:amd64 (21.0.6~6ea-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up libxi6:amd64 (2:1.8.2-1) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libcommons-io-java (2.17.0-1) ... Setting up libdrm-radeon1:amd64 (2.4.123-1) ... Setting up libxtst6:amd64 (2:1.2.3-1.1+b3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libxcursor1:amd64 (1:1.2.3-1) ... Setting up libparams-classify-perl:amd64 (0.015-2+b4) ... Setting up libpango-1.0-0:amd64 (1.56.1-1) ... Setting up libdrm-intel1:amd64 (2.4.123-1) ... Setting up libncbi-vdb3:amd64 (3.0.9+dfsg-2) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink '/etc/systemd/system/timers.target.wants/man-db.timer' → '/usr/lib/systemd/system/man-db.timer'. Setting up libcairo2:amd64 (1.18.2-2) ... Setting up dbus-user-session (1.16.0-1) ... Setting up adwaita-icon-theme (47.0-2) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libmodule-runtime-perl (0.016-2) ... Setting up libatspi2.0-0t64:amd64 (2.55.0.1-1) ... Setting up libcairo-gobject2:amd64 (1.18.2-2) ... Setting up libpangoft2-1.0-0:amd64 (1.56.1-1) ... Setting up libcups2t64:amd64 (2.4.10-2+b1) ... Setting up libpangocairo-1.0-0:amd64 (1.56.1-1) ... Setting up libncbi-ngs3:amd64 (3.0.9+dfsg-7+b1) ... Setting up libatk-bridge2.0-0t64:amd64 (2.55.0.1-1) ... Setting up mesa-libgallium:amd64 (24.3.3-1) ... Setting up libngs-jni:amd64 (3.0.9+dfsg-7+b1) ... Setting up libcommons-compress-java (1.27.1-2) ... Setting up libgbm1:amd64 (24.3.3-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up libgl1-mesa-dri:amd64 (24.3.3-1) ... Setting up debhelper (13.24.1) ... Setting up dconf-service (0.40.0-5) ... Setting up libngs-java:amd64 (3.0.9+dfsg-7+b1) ... Setting up libglx-mesa0:amd64 (24.3.3-1) ... Setting up libglx0:amd64 (1.7.0-1+b2) ... Setting up dconf-gsettings-backend:amd64 (0.40.0-5) ... Setting up libgl1:amd64 (1.7.0-1+b2) ... Setting up libgtk-3-common (3.24.43-5) ... Setting up libgtk-3-0t64:amd64 (3.24.43-5) ... Setting up libwww-perl (6.77-1) ... Setting up devscripts (2.25.1) ... Setting up javahelper (0.80) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Processing triggers for libc-bin (2.40-5) ... Processing triggers for systemd (257.2-2) ... Processing triggers for ca-certificates-java (20240118) ... Adding debian:ACCVRAIZ1.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:AffirmTrust_Premium.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:BJCA_Global_Root_CA1.pem Adding debian:BJCA_Global_Root_CA2.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:Certainly_Root_E1.pem Adding debian:Certainly_Root_R1.pem Adding debian:Certigna.pem Adding debian:Certigna_Root_CA.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:CommScope_Public_Trust_ECC_Root-01.pem Adding debian:CommScope_Public_Trust_ECC_Root-02.pem Adding debian:CommScope_Public_Trust_RSA_Root-01.pem Adding debian:CommScope_Public_Trust_RSA_Root-02.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:D-TRUST_BR_Root_CA_1_2020.pem Adding debian:D-TRUST_EV_Root_CA_1_2020.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:Entrust_Root_Certification_Authority_-_G4.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:FIRMAPROFESIONAL_CA_ROOT-A_WEB.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:GLOBALTRUST_2020.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:GTS_Root_R1.pem Adding debian:GTS_Root_R2.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R4.pem Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:HiPKI_Root_CA_-_G1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:ISRG_Root_X1.pem Adding debian:ISRG_Root_X2.pem Adding debian:Izenpe.com.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem Adding debian:Secure_Global_CA.pem Adding debian:SecureSign_RootCA11.pem Adding debian:SecureSign_Root_CA12.pem Adding debian:SecureSign_Root_CA14.pem Adding debian:SecureSign_Root_CA15.pem Adding debian:SecureTrust_CA.pem Adding debian:Security_Communication_ECC_RootCA1.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Security_Communication_RootCA3.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Telekom_Security_TLS_ECC_Root_2020.pem Adding debian:Telekom_Security_TLS_RSA_Root_2023.pem Adding debian:Telia_Root_CA_v2.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:TrustAsia_Global_Root_CA_G3.pem Adding debian:TrustAsia_Global_Root_CA_G4.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:TunTrust_Root_CA.pem Adding debian:TWCA_CYBER_Root_CA.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:vTrus_ECC_Root_CA.pem Adding debian:vTrus_Root_CA.pem Adding debian:XRamp_Global_CA_Root.pem done. Setting up openjdk-21-jre:amd64 (21.0.6~6ea-1) ... Setting up ant (1.10.15-1) ... Setting up junit4 (4.13.2-5) ... Setting up openjdk-21-jdk-headless:amd64 (21.0.6~6ea-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode Setting up default-jre-headless (2:1.21-76) ... Setting up default-jre (2:1.21-76) ... Setting up openjdk-21-jdk:amd64 (21.0.6~6ea-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode Setting up default-jdk-headless (2:1.21-76) ... Setting up libjson-java (3.1.0+dfsg-2) ... Setting up libhtsjdk-java (4.1.3+dfsg-2) ... Setting up default-jdk (2:1.21-76) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for ca-certificates-java (20240118) ... done. +------------------------------------------------------------------------------+ | Check architectures Mon, 20 Jan 2025 23:10:01 +0000 | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in all) +------------------------------------------------------------------------------+ | Build environment Mon, 20 Jan 2025 23:10:01 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.11.10-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.10-1 (2024-11-23) amd64 (x86_64) Toolchain package versions: binutils_2.43.50.20250108-1 dpkg-dev_1.22.14 g++-13_13.3.0-12 g++-14_14.2.0-14 gcc-13_13.3.0-12 gcc-14_14.2.0-14 libc6-dev_2.40-5 libstdc++-13-dev_13.3.0-12 libstdc++-14-dev_14.2.0-14 libstdc++6_14.2.0-14 linux-libc-dev_6.12.10-1 Package versions: adduser_3.137 adwaita-icon-theme_47.0-2 ant_1.10.15-1 apt_2.9.23 at-spi2-common_2.55.0.1-1 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.23.1-1 autotools-dev_20220109.1 base-files_13.6 base-passwd_3.6.6 bash_5.2.37-1 binfmt-support_2.2.2-7 binutils_2.43.50.20250108-1 binutils-common_2.43.50.20250108-1 binutils-x86-64-linux-gnu_2.43.50.20250108-1 bsdextrautils_2.40.4-1 bsdutils_1:2.40.4-1 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20241223 ca-certificates-java_20240118 coreutils_9.5-1+b1 cpp_4:14.2.0-1 cpp-13_13.3.0-12 cpp-13-x86-64-linux-gnu_13.3.0-12 cpp-14_14.2.0-14 cpp-14-x86-64-linux-gnu_14.2.0-14 cpp-x86-64-linux-gnu_4:14.2.0-1 dash_0.5.12-11 dbus_1.16.0-1 dbus-bin_1.16.0-1 dbus-daemon_1.16.0-1 dbus-session-bus-common_1.16.0-1 dbus-system-bus-common_1.16.0-1 dbus-user-session_1.16.0-1 dconf-gsettings-backend_0.40.0-5 dconf-service_0.40.0-5 dctrl-tools_2.24-3+b1 debconf_1.5.89 debhelper_13.24.1 debian-archive-keyring_2023.4 debianutils_5.21 default-jdk_2:1.21-76 default-jdk-headless_2:1.21-76 default-jre_2:1.21-76 default-jre-headless_2:1.21-76 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python3.13_3.13.1-3 python3.13-minimal_3.13.1-3 readline-common_8.2-6 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.24 shared-mime-info_2.4-5+b1 sqv_1.2.1-5 systemd_257.2-2 systemd-sysv_257.2-2 sysvinit-utils_3.13-1 tar_1.35+dfsg-3.1 tzdata_2025a-1 usr-is-merged_39+nmu2 util-linux_2.40.4-1 wdiff_1.2.2-7 x11-common_1:7.7+23.2 xkb-data_2.42-1 xz-utils_5.6.3-1+b1 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build Mon, 20 Jan 2025 23:10:01 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: fastqc Binary: fastqc Architecture: all Version: 0.12.1+dfsg-4 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Andreas Tille , Olivier Sallou Homepage: https://www.bioinformatics.babraham.ac.uk/projects/fastqc/ Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/fastqc Vcs-Git: https://salsa.debian.org/med-team/fastqc.git Testsuite: autopkgtest Testsuite-Triggers: unzip Build-Depends: debhelper-compat (= 13), javahelper, default-jdk, ant, libhtsjdk-java, libjbzip2-java, libcommons-math3-java Package-List: fastqc deb science optional arch=all Checksums-Sha1: e2e69ecdad67c0ea28a1f32822b1299b2025f812 303884 fastqc_0.12.1+dfsg.orig.tar.xz 309a934f19e5679a1bbf491a48f54a03bb8bd310 15720 fastqc_0.12.1+dfsg-4.debian.tar.xz Checksums-Sha256: e6ddc23aa7c2e45b99564e1bcb58b9ad173b9a529e306366c1037c7a2edbb1f5 303884 fastqc_0.12.1+dfsg.orig.tar.xz 562a80072e37e3a79dbc02ebf127dc9578bcb9b8880792c17e388a350c4fe7b2 15720 fastqc_0.12.1+dfsg-4.debian.tar.xz Files: 674cf57d8e899e286fc1a9fa88aba82f 303884 fastqc_0.12.1+dfsg.orig.tar.xz 9b8be055dde4246889aa0273342e563f 15720 fastqc_0.12.1+dfsg-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEM8soQxPpC9J9y0UjYAMWptwndHYFAmbdpG4ACgkQYAMWptwn dHYqsA/+N3rIhXuC5XA8Jj002UP7y0P/OGKKAzWbQtxQJ3LnXYIq5EjAjqul5zeH ASTyIKMTonH2dxTh4kEIyRL7r+reHDgqVXOYFHngLmjY9KcOJauUiSDo5rWP9l9w gHlxwVb6EgJJ0wtzhD68yK0/Py5R4eFUFIIfYAmsCTrFV9WoJSApzGR9WSV35R2I t/VmUqGmkjB9O5B4+VuklKHB0QVif3EJ+AitbP46TKbFlI4lHc5LAOwMegSklsfs QTR8XJuKe6ACKK27BmxK8Nv+HlwbBWsCJBjLISCthymESF1M2wxWuZN9N0jIW4/S LbBCuuCDVTQ2gmqrSdnyb0njNXxsZMoK5epxMjpD9uP0LC5luf+vvrxq4j2v0no2 q48qwugeuWo0/MWqxcgYrbZ33zxpS67wlrnLrYOqHOy9N7aBLNrPY2QTROW+eBlT 0DmKYMwEnWXRr/aKLY79rhMWY8GNtHbE/qbsi4GjB9aGt13MpfwYqehL/uPMTFz9 kgxT3OV2zkUnhZlLgqS5pzCOJigkgTkRbndLnD5SzHqIQC80UR2QSowNNXozQ+1F zj0kXTcgVLdN+gauTj/Gn3jmu/TaL0ouUKcGl6i03cSE9HssiuIighyHXTWuwT20 MJr817/NEYSuHf98R/2PoMIGfTEPgfKqEJc/5KtKeNeTW/k+tSE= =veVx -----END PGP SIGNATURE----- gpgv: Signature made Sun Sep 8 13:19:42 2024 UTC gpgv: using RSA key 33CB284313E90BD27DCB4523600316A6DC277476 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./fastqc_0.12.1+dfsg-4.dsc: no acceptable signature found dpkg-source: info: extracting fastqc in /build/fastqc-DdbkjU/fastqc-0.12.1+dfsg dpkg-source: info: unpacking fastqc_0.12.1+dfsg.orig.tar.xz dpkg-source: info: unpacking fastqc_0.12.1+dfsg-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying build_xml.patch dpkg-source: info: applying fastqc.patch dpkg-source: info: applying fix-help-call.patch dpkg-source: info: applying set_configuration_path.patch dpkg-source: info: applying no_hdf5.patch Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Timed Build Commands Mon, 20 Jan 2025 23:10:03 +0000 | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/starting-build-commands/no-network fastqc_0.12.1+dfsg-4 perl-5.40-throwaway amd64 --------------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/starting-build-commands/no-network fastqc_0.12.1+dfsg-4 perl-5.40-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_GB.UTF-8 LANGUAGE=en_GB:en LC_ALL=C.UTF-8 LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so LOGNAME=debomatic PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/build/fastqc-DdbkjU/fastqc-0.12.1+dfsg SCHROOT_ALIAS_NAME=perl-5.40-throwaway-amd64-debomatic SCHROOT_CHROOT_NAME=perl-5.40-amd64-debomatic SCHROOT_COMMAND=env SCHROOT_GID=110 SCHROOT_GROUP=sbuild SCHROOT_SESSION_ID=perl-5.40-amd64-debomatic-c39888de-66b1-46d6-98e0-7c8b6598f5d4 SCHROOT_UID=1002 SCHROOT_USER=debomatic SHELL=/bin/sh USER=debomatic dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -Zxz dpkg-buildpackage: info: source package fastqc dpkg-buildpackage: info: source version 0.12.1+dfsg-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Pierre Gruet dpkg-source -Zxz --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with javahelper dh_auto_clean ant clean Buildfile: /build/fastqc-DdbkjU/fastqc-0.12.1+dfsg/build.xml clean: BUILD SUCCESSFUL Total time: 0 seconds jh_clean Duplicate specification "u=s" for option "u" dh_clean dpkg-source -Zxz -b . dpkg-source: info: using source format '3.0 (quilt)' dpkg-source: info: building fastqc using existing ./fastqc_0.12.1+dfsg.orig.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: building fastqc in fastqc_0.12.1+dfsg-4.debian.tar.xz dpkg-source: info: building fastqc in fastqc_0.12.1+dfsg-4.dsc debian/rules binary dh binary --with javahelper dh_update_autotools_config dh_autoreconf dh_auto_configure jh_linkjars debian/rules override_dh_auto_build make[1]: Entering directory '/build/fastqc-DdbkjU/fastqc-0.12.1+dfsg' dh_auto_build ant -Duser.name debian Buildfile: /build/fastqc-DdbkjU/fastqc-0.12.1+dfsg/build.xml build-subprojects: init: [mkdir] Created dir: /build/fastqc-DdbkjU/fastqc-0.12.1+dfsg/bin [copy] Copying 97 files to /build/fastqc-DdbkjU/fastqc-0.12.1+dfsg/bin build-project: [echo] FastQC: /build/fastqc-DdbkjU/fastqc-0.12.1+dfsg/build.xml [javac] Compiling 69 source files to /build/fastqc-DdbkjU/fastqc-0.12.1+dfsg/bin [javac] warning: [options] system modules path not set in conjunction with -source 11 [javac] Note: /build/fastqc-DdbkjU/fastqc-0.12.1+dfsg/uk/ac/babraham/FastQC/FastQCMenuBar.java uses or overrides a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. [javac] 1 warning build: BUILD SUCCESSFUL Total time: 4 seconds cd bin && jar cf fastqc.jar `find uk -name "*.class" -o -name "*.png"` `find net -name "*.class" -o -name "*.png"` Templates # Configuration Help make[1]: Leaving directory '/build/fastqc-DdbkjU/fastqc-0.12.1+dfsg' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/fastqc/ dh_install jh_installjavadoc dh_installdocs debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/fastqc-DdbkjU/fastqc-0.12.1+dfsg' dh_installchangelogs RELEASE_NOTES.txt make[1]: Leaving directory '/build/fastqc-DdbkjU/fastqc-0.12.1+dfsg' dh_installexamples dh_installman dh_icons dh_perl dh_link jh_installlibs jh_classpath jh_manifest jh_exec jh_depends dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dpkg-gencontrol: warning: package fastqc: substitution variable ${perl:Depends} unused, but is defined dh_md5sums dh_builddeb dpkg-deb: building package 'fastqc' in '../fastqc_0.12.1+dfsg-4_all.deb'. dpkg-genbuildinfo -O../fastqc_0.12.1+dfsg-4_amd64.buildinfo dpkg-genchanges -O../fastqc_0.12.1+dfsg-4_amd64.changes dpkg-genchanges: info: not including original source code in upload dpkg-source -Zxz --after-build . dpkg-buildpackage: info: binary and diff upload (original source NOT included) -------------------------------------------------------------------------------- Build finished at 2025-01-20T23:10:16Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Mon, 20 Jan 2025 23:10:16 +0000 | +------------------------------------------------------------------------------+ fastqc_0.12.1+dfsg-4_amd64.changes: ----------------------------------- Format: 1.8 Date: Sun, 08 Sep 2024 15:15:52 +0200 Source: fastqc Binary: fastqc Architecture: source all Version: 0.12.1+dfsg-4 Distribution: perl-5.40-throwaway Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Pierre Gruet Description: fastqc - quality control for high throughput sequence data Changes: fastqc (0.12.1+dfsg-4) unstable; urgency=medium . * Stopping (build-)depending on libsis-jhdf5-java: - Patching files to avoid importing the sis-jhdf5 classes - Refreshing patches * Raising Standards version to 4.7.0 (no change) Checksums-Sha1: 10e629f9124ddf9e153b578b97eb891de18557fb 1284 fastqc_0.12.1+dfsg-4.dsc a2a6359914ca51e7af06813dcf3a970ffe2d4703 15720 fastqc_0.12.1+dfsg-4.debian.tar.xz 460eacadf3854cddc892231b137f375ecba35cd0 397520 fastqc_0.12.1+dfsg-4_all.deb 9dd674f1744be22b0cb1d039fb129129735b1520 13443 fastqc_0.12.1+dfsg-4_amd64.buildinfo Checksums-Sha256: 8712840ba2d5af36d90a78d1fb587a40922fc21b5e838a3e60aa606bd1501fd9 1284 fastqc_0.12.1+dfsg-4.dsc cebd36c5c5365c83a8a95c543cce38fe9d2ae6de9297709c6b759306c782c277 15720 fastqc_0.12.1+dfsg-4.debian.tar.xz 96c786c668e88af5aa8d7e91f67602f5dc0873f874f1b46b857a1e3781b290f6 397520 fastqc_0.12.1+dfsg-4_all.deb 111bd45fe044d309c8966cc8632fcb9791304d2b83ef4b6bb857c64c18644d65 13443 fastqc_0.12.1+dfsg-4_amd64.buildinfo Files: e191b8282286dda16c291e7a451730ff 1284 science optional fastqc_0.12.1+dfsg-4.dsc ea15eab8375c543984b8ba133b273eab 15720 science optional fastqc_0.12.1+dfsg-4.debian.tar.xz 6ea1a416aa7367d31146b9062e5b8073 397520 science optional fastqc_0.12.1+dfsg-4_all.deb d6c8bba8144c2f822d09421f431756d6 13443 science optional fastqc_0.12.1+dfsg-4_amd64.buildinfo +------------------------------------------------------------------------------+ | Buildinfo Mon, 20 Jan 2025 23:10:16 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: fastqc Binary: fastqc Architecture: all source Version: 0.12.1+dfsg-4 Checksums-Md5: e191b8282286dda16c291e7a451730ff 1284 fastqc_0.12.1+dfsg-4.dsc 6ea1a416aa7367d31146b9062e5b8073 397520 fastqc_0.12.1+dfsg-4_all.deb Checksums-Sha1: 10e629f9124ddf9e153b578b97eb891de18557fb 1284 fastqc_0.12.1+dfsg-4.dsc 460eacadf3854cddc892231b137f375ecba35cd0 397520 fastqc_0.12.1+dfsg-4_all.deb Checksums-Sha256: 8712840ba2d5af36d90a78d1fb587a40922fc21b5e838a3e60aa606bd1501fd9 1284 fastqc_0.12.1+dfsg-4.dsc 96c786c668e88af5aa8d7e91f67602f5dc0873f874f1b46b857a1e3781b290f6 397520 fastqc_0.12.1+dfsg-4_all.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Mon, 20 Jan 2025 23:10:15 +0000 Build-Path: /build/fastqc-DdbkjU/fastqc-0.12.1+dfsg Build-Tainted-By: usr-local-has-programs Installed-Build-Depends: adduser (= 3.137), adwaita-icon-theme (= 47.0-2), ant (= 1.10.15-1), at-spi2-common (= 2.55.0.1-1), autoconf (= 2.72-3), automake (= 1:1.16.5-1.3), autopoint (= 0.23.1-1), autotools-dev (= 20220109.1), base-files (= 13.6), base-passwd (= 3.6.6), bash (= 5.2.37-1), binfmt-support (= 2.2.2-7), binutils (= 2.43.50.20250108-1), binutils-common (= 2.43.50.20250108-1), binutils-x86-64-linux-gnu (= 2.43.50.20250108-1), bsdextrautils (= 2.40.4-1), bsdutils (= 1:2.40.4-1), build-essential (= 12.12), bzip2 (= 1.0.8-6), ca-certificates (= 20241223), ca-certificates-java (= 20240118), coreutils (= 9.5-1+b1), cpp (= 4:14.2.0-1), cpp-13 (= 13.3.0-12), cpp-13-x86-64-linux-gnu (= 13.3.0-12), cpp-14 (= 14.2.0-14), cpp-14-x86-64-linux-gnu (= 14.2.0-14), cpp-x86-64-linux-gnu (= 4:14.2.0-1), dash (= 0.5.12-11), dbus (= 1.16.0-1), dbus-bin (= 1.16.0-1), dbus-daemon (= 1.16.0-1), dbus-session-bus-common (= 1.16.0-1), dbus-system-bus-common (= 1.16.0-1), dbus-user-session (= 1.16.0-1), dconf-gsettings-backend (= 0.40.0-5), dconf-service (= 0.40.0-5), dctrl-tools (= 2.24-3+b1), debconf (= 1.5.89), debhelper (= 13.24.1), debianutils (= 5.21), default-jdk (= 2:1.21-76), default-jdk-headless (= 2:1.21-76), default-jre (= 2:1.21-76), default-jre-headless (= 2:1.21-76), devscripts (= 2.25.1), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.0-1), diffutils (= 1:3.10-2), dirmngr (= 2.2.46-1+b1), dpkg (= 1.22.14), dpkg-dev (= 1.22.14), dwz (= 0.15-1+b1), fastjar (= 2:0.98-7), file (= 1:5.45-3+b1), findutils (= 4.10.0-3), fontconfig (= 2.15.0-2), fontconfig-config (= 2.15.0-2), fonts-dejavu-core (= 2.37-8), fonts-dejavu-mono (= 2.37-8), g++ (= 4:14.2.0-1), g++-14 (= 14.2.0-14), g++-14-x86-64-linux-gnu (= 14.2.0-14), g++-x86-64-linux-gnu (= 4:14.2.0-1), gcc (= 4:14.2.0-1), gcc-13 (= 13.3.0-12), gcc-13-base (= 13.3.0-12), gcc-13-x86-64-linux-gnu (= 13.3.0-12), gcc-14 (= 14.2.0-14), gcc-14-base (= 14.2.0-14), gcc-14-x86-64-linux-gnu (= 14.2.0-14), gcc-x86-64-linux-gnu (= 4:14.2.0-1), gettext (= 0.23.1-1), gettext-base (= 0.23.1-1), gnupg (= 2.2.46-1), gnupg-l10n (= 2.2.46-1), gpg (= 2.2.46-1+b1), gpg-agent (= 2.2.46-1+b1), gpgconf (= 2.2.46-1+b1), gpgsm (= 2.2.46-1+b1), gpgv (= 2.2.46-1+b1), grep (= 3.11-4), groff-base (= 1.23.0-7), gtk-update-icon-cache (= 4.16.12+ds-1), gzip (= 1.13-1), hicolor-icon-theme (= 0.18-1), hostname (= 3.25), init-system-helpers (= 1.68), intltool-debian (= 0.35.0+20060710.6), jarwrapper (= 0.80), java-common (= 0.76), javahelper (= 0.80), junit4 (= 4.13.2-5), libacl1 (= 2.3.2-2+b1), libapache-pom-java (= 33-2), libapparmor1 (= 3.1.7-1+b3), libarchive-zip-perl (= 1.68-1), libasan8 (= 14.2.0-14), libasound2-data (= 1.2.13-1), libasound2t64 (= 1.2.13-1+b1), libassuan9 (= 3.0.1-2), libatk-bridge2.0-0t64 (= 2.55.0.1-1), libatk1.0-0t64 (= 2.55.0.1-1), libatomic1 (= 14.2.0-14), libatspi2.0-0t64 (= 2.55.0.1-1), libattr1 (= 1:2.5.2-2), libaudit-common (= 1:4.0.2-2), libaudit1 (= 1:4.0.2-2+b1), libavahi-client3 (= 0.8-16), libavahi-common-data (= 0.8-16), libavahi-common3 (= 0.8-16), libb-hooks-op-check-perl (= 0.22-3+b2), libbinutils (= 2.43.50.20250108-1), libblkid1 (= 2.40.4-1), libbrotli1 (= 1.1.0-2+b6), libbsd0 (= 0.12.2-2), libbz2-1.0 (= 1.0.8-6), libc-bin (= 2.40-5), libc-dev-bin (= 2.40-5), libc6 (= 2.40-5), libc6-dev (= 2.40-5), libcairo-gobject2 (= 1.18.2-2), libcairo2 (= 1.18.2-2), libcap-ng0 (= 0.8.5-4), libcap2 (= 1:2.66-5+b1), libcc1-0 (= 14.2.0-14), libclass-method-modifiers-perl (= 2.15-1), libclass-xsaccessor-perl (= 1.19-4+b5), libclone-perl (= 0.47-1+b1), libcloudproviders0 (= 0.3.6-1+b1), libcolord2 (= 1.4.7-1+b2), libcom-err2 (= 1.47.2-1), libcommons-beanutils-java (= 1.9.4-2), libcommons-codec-java (= 1.17.1-1), libcommons-collections3-java (= 3.2.2-3), libcommons-collections4-java (= 4.4-2), libcommons-compress-java (= 1.27.1-2), libcommons-io-java (= 2.17.0-1), libcommons-jexl2-java (= 2.1.1-6), libcommons-lang3-java (= 3.17.0-1), libcommons-logging-java (= 1.3.0-1), libcommons-math3-java (= 3.6.1-4), libcommons-parent-java (= 56-1), libcrypt-dev (= 1:4.4.38-1), libcrypt1 (= 1:4.4.38-1), libctf-nobfd0 (= 2.43.50.20250108-1), libctf0 (= 2.43.50.20250108-1), libcups2t64 (= 2.4.10-2+b1), libdatrie1 (= 0.2.13-3+b1), libdb5.3t64 (= 5.3.28+dfsg2-9), libdbus-1-3 (= 1.16.0-1), libdconf1 (= 0.40.0-5), libdebconfclient0 (= 0.277), libdebhelper-perl (= 13.24.1), libdeflate0 (= 1.23-1+b1), libdevel-callchecker-perl (= 0.009-1+b1), libdpkg-perl (= 1.22.14), libdrm-amdgpu1 (= 2.4.123-1), libdrm-common (= 2.4.123-1), libdrm-intel1 (= 2.4.123-1), libdrm-radeon1 (= 2.4.123-1), libdrm2 (= 2.4.123-1), libdynaloader-functions-perl (= 0.004-1), libedit2 (= 3.1-20250104-1), libelf1t64 (= 0.192-4), libencode-locale-perl (= 1.05-3), libepoxy0 (= 1.5.10-2), libexpat1 (= 2.6.4-1), libezmorph-java (= 1.0.6-4), libffi8 (= 3.4.6-1), libfile-dirlist-perl (= 0.05-3), libfile-homedir-perl (= 1.006-2), libfile-listing-perl (= 6.16-1), libfile-stripnondeterminism-perl (= 1.14.0-1), libfile-touch-perl (= 0.12-2), libfile-which-perl (= 1.27-2), libfontconfig1 (= 2.15.0-2), libfreetype6 (= 2.13.3+dfsg-1), libfribidi0 (= 1.0.16-1), libgbm1 (= 24.3.3-1), libgcc-13-dev (= 13.3.0-12), libgcc-14-dev (= 14.2.0-14), libgcc-s1 (= 14.2.0-14), libgcrypt20 (= 1.11.0-7), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgdk-pixbuf-2.0-0 (= 2.42.12+dfsg-1+b1), libgdk-pixbuf2.0-common (= 2.42.12+dfsg-1), libgif7 (= 5.2.2-1+b1), libgl1 (= 1.7.0-1+b2), libgl1-mesa-dri (= 24.3.3-1), libglapi-mesa (= 24.3.3-1), libglib2.0-0t64 (= 2.82.4-2), libglvnd0 (= 1.7.0-1+b2), libglx-mesa0 (= 24.3.3-1), libglx0 (= 1.7.0-1+b2), libgmp10 (= 2:6.3.0+dfsg-3), libgnutls30t64 (= 3.8.8-2), libgomp1 (= 14.2.0-14), libgpg-error0 (= 1.51-3), libgprofng0 (= 2.43.50.20250108-1), libgraphite2-3 (= 1.3.14-2+b1), libgssapi-krb5-2 (= 1.21.3-4), libgtk-3-0t64 (= 3.24.43-5), libgtk-3-common (= 3.24.43-5), libhamcrest-java (= 2.2-2), libharfbuzz0b (= 10.2.0-1), libhogweed6t64 (= 3.10-1+b1), libhtml-parser-perl (= 3.83-1+b2), libhtml-tagset-perl (= 3.24-1), libhtml-tree-perl (= 5.07-3), libhtsjdk-java (= 4.1.3+dfsg-2), libhttp-cookies-perl (= 6.11-1), libhttp-date-perl (= 6.06-1), libhttp-message-perl (= 7.00-2), libhttp-negotiate-perl (= 6.01-2), libhwasan0 (= 14.2.0-14), libicu72 (= 72.1-6), libidn2-0 (= 2.3.7-2+b1), libimport-into-perl (= 1.002005-2), libio-html-perl (= 1.004-3), libio-pty-perl (= 1:1.20-1+b2), libio-socket-ssl-perl (= 2.089-1), libipc-run-perl (= 20231003.0-2), libisl23 (= 0.27-1), libitm1 (= 14.2.0-14), libjansson4 (= 2.14-2+b3), libjaxen-java (= 1.1.6-5), libjbig0 (= 2.1-6.1+b2), libjbzip2-java (= 0.9.1-8), libjpeg62-turbo (= 1:2.1.5-3+b1), libjson-java (= 3.1.0+dfsg-2), libk5crypto3 (= 1.21.3-4), libkeyutils1 (= 1.6.3-4), libkrb5-3 (= 1.21.3-4), libkrb5support0 (= 1.21.3-4), libksba8 (= 1.6.7-2+b1), liblcms2-2 (= 2.16-2), libldap2 (= 2.6.9+dfsg-1), liblerc4 (= 4.0.0+ds-5), libllvm19 (= 1:19.1.7-1), liblsan0 (= 14.2.0-14), liblwp-mediatypes-perl (= 6.04-2), liblwp-protocol-https-perl (= 6.14-1), liblzma5 (= 5.6.3-1+b1), libmagic-mgc (= 1:5.45-3+b1), libmagic1t64 (= 1:5.45-3+b1), libmbedcrypto16 (= 3.6.2-3), libmbedtls21 (= 3.6.2-3), libmbedx509-7 (= 3.6.2-3), libmd0 (= 1.1.0-2+b1), libmodule-runtime-perl (= 0.016-2), libmoo-perl (= 2.005005-1), libmount1 (= 2.40.4-1), libmpc3 (= 1.3.1-1+b3), libmpfr6 (= 4.2.1-1+b2), libncbi-ngs3 (= 3.0.9+dfsg-7+b1), libncbi-vdb3 (= 3.0.9+dfsg-2), libncursesw6 (= 6.5-2+b1), libnet-http-perl (= 6.23-1), libnet-ssleay-perl (= 1.94-2), libnettle8t64 (= 3.10-1+b1), libngs-java (= 3.0.9+dfsg-7+b1), libngs-jni (= 3.0.9+dfsg-7+b1), libnpth0t64 (= 1.8-2), libnspr4 (= 2:4.36-1), libnss3 (= 2:3.107-1), libp11-kit0 (= 0.25.5-3), libpam-modules (= 1.5.3-7+b1), libpam-modules-bin (= 1.5.3-7+b1), libpam-runtime (= 1.5.3-7), libpam-systemd (= 257.2-2), libpam0g (= 1.5.3-7+b1), libpango-1.0-0 (= 1.56.1-1), libpangocairo-1.0-0 (= 1.56.1-1), libpangoft2-1.0-0 (= 1.56.1-1), libparams-classify-perl (= 0.015-2+b4), libpciaccess0 (= 0.17-3+b3), libpcre2-8-0 (= 10.44-5), libpcsclite1 (= 2.3.1-1), libperl5.40 (= 5.40.1-1), libpipeline1 (= 1.5.8-1), libpixman-1-0 (= 0.44.0-3), libpng16-16t64 (= 1.6.45-1), libproc2-0 (= 2:4.0.4-6), libpython3-stdlib (= 3.13.1-2), libpython3.13-minimal (= 3.13.1-3), libpython3.13-stdlib (= 3.13.1-3), libquadmath0 (= 14.2.0-14), libreadline8t64 (= 8.2-6), librhino-java (= 1.7.15-1), librole-tiny-perl (= 2.002004-1), libsasl2-2 (= 2.1.28+dfsg1-8+b1), libsasl2-modules-db (= 2.1.28+dfsg1-8+b1), libseccomp2 (= 2.5.5-2), libselinux1 (= 3.7-3+b1), libsemanage-common (= 3.7-2), libsemanage2 (= 3.7-2+b1), libsensors-config (= 1:3.6.0-10), libsensors5 (= 1:3.6.0-10+b1), libsepol2 (= 3.7-1), libsframe1 (= 2.43.50.20250108-1), libsharpyuv0 (= 1.5.0-0.1), libslf4j-java (= 1.7.32-1), libsmartcols1 (= 2.40.4-1), libsnappy-java (= 1.1.10.7-1), libsnappy-jni (= 1.1.10.7-1), libsnappy1v5 (= 1.2.1-1+b1), libsqlite3-0 (= 3.46.1-1), libssl3t64 (= 3.4.0-2), libstdc++-14-dev (= 14.2.0-14), libstdc++6 (= 14.2.0-14), libsub-quote-perl (= 2.006008-1), libsystemd-shared (= 257.2-2), libsystemd0 (= 257.2-2), libtasn1-6 (= 4.19.0-3+b3), libthai-data (= 0.1.29-2), libthai0 (= 0.1.29-2+b1), libtiff6 (= 4.5.1+git230720-5), libtimedate-perl (= 2.3300-2), libtinfo6 (= 6.5-2+b1), libtool (= 2.5.4-2), libtry-tiny-perl (= 0.32-1), libtsan2 (= 14.2.0-14), libubsan1 (= 14.2.0-14), libuchardet0 (= 0.0.8-1+b2), libudev1 (= 257.2-2), libunistring5 (= 1.3-1), liburi-perl (= 5.30-1), libuuid1 (= 2.40.4-1), libvulkan1 (= 1.4.304.0-1), libwayland-client0 (= 1.23.0-1+b1), libwayland-cursor0 (= 1.23.0-1+b1), libwayland-egl1 (= 1.23.0-1+b1), libwayland-server0 (= 1.23.0-1+b1), libwebp7 (= 1.5.0-0.1), libwww-perl (= 6.77-1), libwww-robotrules-perl (= 6.02-1), libx11-6 (= 2:1.8.10-2), libx11-data (= 2:1.8.10-2), libx11-xcb1 (= 2:1.8.10-2), libxau6 (= 1:1.0.11-1), libxcb-dri3-0 (= 1.17.0-2+b1), libxcb-glx0 (= 1.17.0-2+b1), libxcb-present0 (= 1.17.0-2+b1), libxcb-randr0 (= 1.17.0-2+b1), libxcb-render0 (= 1.17.0-2+b1), libxcb-shm0 (= 1.17.0-2+b1), libxcb-sync1 (= 1.17.0-2+b1), libxcb-xfixes0 (= 1.17.0-2+b1), libxcb1 (= 1.17.0-2+b1), libxcomposite1 (= 1:0.4.6-1), libxcursor1 (= 1:1.2.3-1), libxdamage1 (= 1:1.1.6-1+b2), libxdmcp6 (= 1:1.1.5-1), libxerces2-java (= 2.12.2-1), libxext6 (= 2:1.3.4-1+b3), libxfixes3 (= 1:6.0.0-2+b3), libxi6 (= 2:1.8.2-1), libxinerama1 (= 2:1.1.4-3+b3), libxkbcommon0 (= 1.7.0-2), libxml-commons-external-java (= 1.4.01-6), libxml-commons-resolver1.1-java (= 1.2-11), libxml2 (= 2.12.7+dfsg+really2.9.14-0.2+b1), libxom-java (= 1.3.9-1), libxrandr2 (= 2:1.5.4-1+b2), libxrender1 (= 1:0.9.10-1.1+b3), libxshmfence1 (= 1.3-1+b3), libxtst6 (= 2:1.2.3-1.1+b3), libxxf86vm1 (= 1:1.1.4-1+b4), libz3-4 (= 4.13.3-1), libzstd1 (= 1.5.6+dfsg-2), linux-libc-dev (= 6.12.10-1), login.defs (= 1:4.16.0-7), m4 (= 1.4.19-5), make (= 4.4.1-1), man-db (= 2.13.0-1), mawk (= 1.3.4.20240905-1), media-types (= 10.1.0), mesa-libgallium (= 24.3.3-1), mount (= 2.40.4-1), ncbi-vdb-data (= 3.0.9+dfsg-2), ncurses-base (= 6.5-2), ncurses-bin (= 6.5-2+b1), netbase (= 6.4), openjdk-21-jdk (= 21.0.6~6ea-1), openjdk-21-jdk-headless (= 21.0.6~6ea-1), openjdk-21-jre (= 21.0.6~6ea-1), openjdk-21-jre-headless (= 21.0.6~6ea-1), openssl (= 3.4.0-2), openssl-provider-legacy (= 3.4.0-2), passwd (= 1:4.16.0-7), patch (= 2.7.6-7), patchutils (= 0.4.2-1), perl (= 5.40.1-1), perl-base (= 5.40.1-1), perl-modules-5.40 (= 5.40.1-1), perl-openssl-defaults (= 7+b2), pinentry-curses (= 1.3.1-2), po-debconf (= 1.0.21+nmu1), procps (= 2:4.0.4-6), python3 (= 3.13.1-2), python3-minimal (= 3.13.1-2), python3.13 (= 3.13.1-3), python3.13-minimal (= 3.13.1-3), readline-common (= 8.2-6), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.24), shared-mime-info (= 2.4-5+b1), systemd (= 257.2-2), systemd-sysv (= 257.2-2), sysvinit-utils (= 3.13-1), tar (= 1.35+dfsg-3.1), tzdata (= 2025a-1), usr-is-merged (= 39+nmu2), util-linux (= 2.40.4-1), wdiff (= 1.2.2-7), x11-common (= 1:7.7+23.2), xkb-data (= 2.42-1), xz-utils (= 5.6.3-1+b1), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="parallel=2" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" LD_LIBRARY_PATH="/usr/lib/libeatmydata" SOURCE_DATE_EPOCH="1725801352" +------------------------------------------------------------------------------+ | Package contents Mon, 20 Jan 2025 23:10:16 +0000 | +------------------------------------------------------------------------------+ fastqc_0.12.1+dfsg-4_all.deb ---------------------------- new Debian package, version 2.0. size 397520 bytes: control archive=2400 bytes. 127 bytes, 3 lines conffiles 1167 bytes, 24 lines control 4015 bytes, 44 lines md5sums Package: fastqc Version: 0.12.1+dfsg-4 Architecture: all Maintainer: Debian Med Packaging Team Installed-Size: 573 Depends: libcommons-math3-java, libjbzip2-java, libhtsjdk-java, libfindbin-libs-perl, default-jre Section: science Priority: optional Homepage: https://www.bioinformatics.babraham.ac.uk/projects/fastqc/ Description: quality control for high throughput sequence data FastQC aims to provide a simple way to do some quality control checks on raw sequence data coming from high throughput sequencing pipelines. It provides a modular set of analyses which you can use to give a quick impression of whether your data has any problems of which you should be aware before doing any further analysis. . The main functions of FastQC are * Import of data from BAM, SAM or FastQ files (any variant) * Providing a quick overview to tell you in which areas there may be problems * Summary graphs and tables to quickly assess your data * Export of results to an HTML based permanent report * Offline operation to allow automated generation of reports without running the interactive application drwxr-xr-x root/root 0 2024-09-08 13:15 ./ drwxr-xr-x root/root 0 2024-09-08 13:15 ./etc/ drwxr-xr-x root/root 0 2024-09-08 13:15 ./etc/fastqc/ drwxr-xr-x root/root 0 2023-03-01 15:17 ./etc/fastqc/Configuration/ -rw-r--r-- root/root 1355 2023-03-01 15:17 ./etc/fastqc/Configuration/adapter_list.txt -rw-r--r-- root/root 13175 2023-03-01 15:17 ./etc/fastqc/Configuration/contaminant_list.txt -rw-r--r-- root/root 2608 2023-03-01 15:17 ./etc/fastqc/Configuration/limits.txt drwxr-xr-x root/root 0 2024-09-08 13:15 ./usr/ drwxr-xr-x root/root 0 2024-09-08 13:15 ./usr/bin/ -rwxr-xr-x root/root 16915 2024-09-08 13:15 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15:17 ./usr/share/fastqc/Help/2 Basic Operations/2.1 Opening a sequence file.html -rw-r--r-- root/root 1195 2023-03-01 15:17 ./usr/share/fastqc/Help/2 Basic Operations/2.2 Evaluating Results.html -rw-r--r-- root/root 1202 2023-03-01 15:17 ./usr/share/fastqc/Help/2 Basic Operations/2.3 Saving a Report.html drwxr-xr-x root/root 0 2024-09-08 13:15 ./usr/share/fastqc/Help/3 Analysis Modules/ -rw-r--r-- root/root 1821 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/1 Basic Statistics.html -rw-r--r-- root/root 3067 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/10 Adapter Content.html -rw-r--r-- root/root 2517 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/11 Kmer Content.html -rw-r--r-- root/root 2264 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/12 Per Tile Sequence Quality.html -rw-r--r-- root/root 3691 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/2 Per Base Sequence Quality.html -rw-r--r-- root/root 1718 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/3 Per Sequence Quality Scores.html -rw-r--r-- root/root 3618 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/4 Per Base Sequence Content.html -rw-r--r-- root/root 1873 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/5 Per Sequence GC Content.html -rw-r--r-- root/root 1884 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/6 Per Base N Content.html -rw-r--r-- root/root 1222 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/7 Sequence Length Distribution.html -rw-r--r-- root/root 5491 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/8 Duplicate Sequences.html -rw-r--r-- root/root 2416 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/9 Overrepresented Sequences.html -rw-r--r-- root/root 20545 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/duplication_levels.png -rw-r--r-- root/root 76372 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/kmer_profiles.png 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./usr/share/icons/hicolor/ drwxr-xr-x root/root 0 2024-09-08 13:15 ./usr/share/icons/hicolor/32x32/ drwxr-xr-x root/root 0 2024-09-08 13:15 ./usr/share/icons/hicolor/32x32/apps/ -rw-r--r-- root/root 1197 2023-03-01 15:17 ./usr/share/icons/hicolor/32x32/apps/fastqc_icon.png drwxr-xr-x root/root 0 2024-09-08 13:15 ./usr/share/java/ -rw-r--r-- root/root 194337 2024-09-08 13:15 ./usr/share/java/fastqc-0.12.1.jar lrwxrwxrwx root/root 0 2024-09-08 13:15 ./usr/share/java/fastqc.jar -> fastqc-0.12.1.jar drwxr-xr-x root/root 0 2024-09-08 13:15 ./usr/share/man/ drwxr-xr-x root/root 0 2024-09-08 13:15 ./usr/share/man/man1/ -rw-r--r-- root/root 1822 2024-09-08 13:15 ./usr/share/man/man1/fastqc.1.gz +------------------------------------------------------------------------------+ | Post Build Mon, 20 Jan 2025 23:10:17 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Mon, 20 Jan 2025 23:10:17 +0000 | +------------------------------------------------------------------------------+ Purging /build/fastqc-DdbkjU Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Mon, 20 Jan 2025 23:10:18 +0000 | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: full Build-Space: 4460 Build-Time: 13 Distribution: perl-5.40-throwaway Host Architecture: amd64 Install-Time: 69 Job: /srv/debomatic/incoming/fastqc_0.12.1+dfsg-4.dsc Machine Architecture: amd64 Package: fastqc Package-Time: 92 Source-Version: 0.12.1+dfsg-4 Space: 4460 Status: successful Version: 0.12.1+dfsg-4 -------------------------------------------------------------------------------- Finished at 2025-01-20T23:10:16Z Build needed 00:01:32, 4460k disk space