sbuild (Debian sbuild) 0.85.9 (29 May 2024) on carme.larted.org.uk +==============================================================================+ | fastqc 0.12.1+dfsg-3 (amd64) Mon, 03 Jun 2024 05:07:34 +0000 | +==============================================================================+ Package: fastqc Version: 0.12.1+dfsg-3 Source Version: 0.12.1+dfsg-3 Distribution: perl-5.40-throwaway Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: full I: NOTICE: Log filtering will replace 'var/run/schroot/mount/perl-5.40-amd64-debomatic-7aaed1ed-64ff-4ba7-b7f4-72deb58bd7a2' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup fastqc_0.12.1+dfsg-3 perl-5.40-throwaway amd64 --------------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup fastqc_0.12.1+dfsg-3 perl-5.40-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- I: NOTICE: Log filtering will replace 'build/fastqc-qKdvLe/resolver-bjkJWz' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 file:/srv/reprepro perl-5.40 InRelease [3039 B] Get:1 file:/srv/reprepro perl-5.40 InRelease [3039 B] Get:2 http://localhost:3142/debian unstable InRelease [198 kB] Get:3 http://localhost:3142/debian sid InRelease [198 kB] Get:4 file:/srv/reprepro perl-5.40/main amd64 Packages [598 kB] Get:5 http://localhost:3142/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:6 http://localhost:3142/debian unstable/main amd64 Packages T-2024-06-03-0205.12-F-2024-06-03-0205.12.pdiff [9885 B] Get:6 http://localhost:3142/debian unstable/main amd64 Packages T-2024-06-03-0205.12-F-2024-06-03-0205.12.pdiff [9885 B] Get:7 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:8 http://localhost:3142/debian sid/main Sources T-2024-06-03-0205.12-F-2024-06-03-0205.12.pdiff [7265 B] Get:8 http://localhost:3142/debian sid/main Sources T-2024-06-03-0205.12-F-2024-06-03-0205.12.pdiff [7265 B] Fetched 541 kB in 3s (168 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: login passwd 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 1564 kB of archives. After this operation, 57.3 kB disk space will be freed. Get:1 http://localhost:3142/debian unstable/main amd64 login amd64 1:4.13+dfsg1-5 [590 kB] Get:2 http://localhost:3142/debian unstable/main amd64 passwd amd64 1:4.13+dfsg1-5 [974 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 1564 kB in 0s (44.1 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21779 files and directories currently installed.) Preparing to unpack .../login_1%3a4.13+dfsg1-5_amd64.deb ... Unpacking login (1:4.13+dfsg1-5) over (1:4.13+dfsg1-4) ... Setting up login (1:4.13+dfsg1-5) ... Installing new version of config file /etc/pam.d/login ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21765 files and directories currently installed.) Preparing to unpack .../passwd_1%3a4.13+dfsg1-5_amd64.deb ... Unpacking passwd (1:4.13+dfsg1-5) over (1:4.13+dfsg1-4) ... Setting up passwd (1:4.13+dfsg1-5) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- /srv/debomatic/incoming/fastqc_0.12.1+dfsg-3.dsc exists in /srv/debomatic/incoming; copying to chroot I: NOTICE: Log filtering will replace 'build/fastqc-qKdvLe/fastqc-0.12.1+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/fastqc-qKdvLe' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), javahelper, default-jdk, ant, libhtsjdk-java, libjbzip2-java, libcommons-math3-java, libsis-jhdf5-java, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 13), javahelper, default-jdk, ant, libhtsjdk-java, libjbzip2-java, libcommons-math3-java, libsis-jhdf5-java, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [721 B] Get:5 copy:/<>/apt_archive ./ Packages [753 B] Fetched 2083 B in 0s (96.0 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: adwaita-icon-theme ant at-spi2-common autoconf automake autopoint autotools-dev binfmt-support bsdextrautils ca-certificates ca-certificates-java dctrl-tools debhelper default-jdk default-jdk-headless default-jre default-jre-headless devscripts dh-autoreconf dh-strip-nondeterminism dwz fakeroot fastjar file fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono gettext gettext-base groff-base gtk-update-icon-cache hicolor-icon-theme intltool-debian jarwrapper java-common javahelper libaec0 libapache-pom-java libarchive-zip-perl libargs4j-java libasound2-data libasound2t64 libatk1.0-0t64 libavahi-client3 libavahi-common-data libavahi-common3 libb-hooks-op-check-perl libbrotli1 libbsd0 libcairo2 libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcom-err2 libcommons-compress-java libcommons-io-java libcommons-jexl2-java libcommons-lang3-java libcommons-logging-java libcommons-math3-java libcommons-parent-java libcups2t64 libcurl4t64 libdatrie1 libdbus-1-3 libdebhelper-perl libdeflate0 libdevel-callchecker-perl libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-radeon1 libdrm2 libdynaloader-functions-perl libedit2 libelf1t64 libencode-locale-perl libexpat1 libfakeroot libfile-dirlist-perl libfile-homedir-perl libfile-listing-perl libfile-stripnondeterminism-perl libfile-touch-perl libfile-which-perl libfontconfig1 libfreetype6 libfribidi0 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgif7 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0t64 libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 libgssapi-krb5-2 libgtk2.0-0t64 libgtk2.0-common libharfbuzz0b libhdf5-103-1t64 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhtsjdk-java libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu72 libimport-into-perl libio-html-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libjbig0 libjbzip2-java libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblcms2-2 liblerc4 libllvm17t64 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1t64 libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 libmjson-java libmodule-runtime-perl libmoo-perl libncbi-ngs3 libncbi-vdb3 libnet-http-perl libnet-ssleay-perl libnghttp2-14 libngs-java libngs-jni libnspr4 libnss3 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libparams-classify-perl libpciaccess0 libpcsclite1 libpipeline1 libpixman-1-0 libpng16-16t64 libpsl5t64 libpython3-stdlib libpython3.11-minimal libpython3.11-stdlib librhino-java librole-tiny-perl librtmp1 libsensors-config libsensors5 libsharpyuv0 libsis-base-java libsis-base-jni libsis-jhdf5-java libsis-jhdf5-jni libsnappy-java libsnappy-jni libsnappy1v5 libssh2-1t64 libsub-quote-perl libsz2 libthai-data libthai0 libtiff6 libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libvulkan1 libwebp7 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxi6 libxinerama1 libxml2 libxrandr2 libxrender1 libxshmfence1 libxtst6 libxxf86vm1 libz3-4 m4 man-db media-types ncbi-vdb-data netbase openjdk-17-jdk openjdk-17-jdk-headless openjdk-17-jre openjdk-17-jre-headless openssl patchutils perl-openssl-defaults po-debconf python3 python3-minimal python3.11 python3.11-minimal sensible-utils shared-mime-info tzdata wdiff x11-common Suggested packages: ant-doc autoconf-archive gnu-standards autoconf-doc debtags dh-make adequate at autopkgtest bls-standalone bsd-mailx | mailx check-all-the-things cvs-buildpackage diffoscope disorderfs dose-extra duck elpa-devscripts faketime gnuplot how-can-i-help libauthen-sasl-perl libdbd-pg-perl libfile-desktopentry-perl libterm-size-perl libyaml-syck-perl mmdebstrap mutt piuparts postgresql-client pristine-lfs quilt ratt reprotest ssh-client svn-buildpackage w3m gettext-doc libasprintf-dev libgettextpo-dev groff alsa-utils libasound2-plugins libasm-java libxz-java libavalon-framework-java libexcalibur-logkit-java liblog4j1.2-java cups-common low-memory-monitor krb5-doc krb5-user gvfs libdata-dump-perl picard-tools liblcms2-utils libcrypt-ssleay-perl libngs-java-doc libscalar-number-perl pciutils pcscd rhino lm-sensors libtool-doc gfortran | fortran95-compiler gcj-jdk libsub-name-perl libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl m4-doc apparmor less www-browser openjdk-17-demo openjdk-17-source visualvm libnss-mdns fonts-dejavu-extra fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic libmail-box-perl python3-doc python3-tk python3-venv python3.11-venv python3.11-doc wdiff-doc Recommended packages: librsvg2-common ant-optional dput | dupload libdistro-info-perl libgit-wrapper-perl libjson-perl liblist-compare-perl libstring-shellquote-perl licensecheck lintian python3-apt python3-debian python3-magic python3-requests python3-unidiff python3-xdg strace unzip wget | curl debian-keyring equivs libgitlab-api-v4-perl libsoap-lite-perl pristine-tar curl | wget | lynx alsa-ucm-conf alsa-topology-conf dbus libarchive-cpio-perl libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs libgail-common libgtk2.0-bin libhtml-format-perl libio-compress-brotli-perl krb5-locales libnamespace-clean-perl publicsuffix libxstring-perl libltdl-dev mesa-vulkan-drivers | vulkan-icd libdata-dump-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl libxt-dev libatk-wrapper-java-jni fonts-dejavu-extra libmail-sendmail-perl The following NEW packages will be installed: adwaita-icon-theme ant at-spi2-common autoconf automake autopoint autotools-dev binfmt-support bsdextrautils ca-certificates ca-certificates-java dctrl-tools debhelper default-jdk default-jdk-headless default-jre default-jre-headless devscripts dh-autoreconf dh-strip-nondeterminism dwz fakeroot fastjar file fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono gettext gettext-base groff-base gtk-update-icon-cache hicolor-icon-theme intltool-debian jarwrapper java-common javahelper libaec0 libapache-pom-java libarchive-zip-perl libargs4j-java libasound2-data libasound2t64 libatk1.0-0t64 libavahi-client3 libavahi-common-data libavahi-common3 libb-hooks-op-check-perl libbrotli1 libbsd0 libcairo2 libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcom-err2 libcommons-compress-java libcommons-io-java libcommons-jexl2-java libcommons-lang3-java libcommons-logging-java libcommons-math3-java libcommons-parent-java libcups2t64 libcurl4t64 libdatrie1 libdbus-1-3 libdebhelper-perl libdeflate0 libdevel-callchecker-perl libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-radeon1 libdrm2 libdynaloader-functions-perl libedit2 libelf1t64 libencode-locale-perl libexpat1 libfakeroot libfile-dirlist-perl libfile-homedir-perl libfile-listing-perl libfile-stripnondeterminism-perl libfile-touch-perl libfile-which-perl libfontconfig1 libfreetype6 libfribidi0 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgif7 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0t64 libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 libgssapi-krb5-2 libgtk2.0-0t64 libgtk2.0-common libharfbuzz0b libhdf5-103-1t64 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhtsjdk-java libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu72 libimport-into-perl libio-html-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libjbig0 libjbzip2-java libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblcms2-2 liblerc4 libllvm17t64 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1t64 libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 libmjson-java libmodule-runtime-perl libmoo-perl libncbi-ngs3 libncbi-vdb3 libnet-http-perl libnet-ssleay-perl libnghttp2-14 libngs-java libngs-jni libnspr4 libnss3 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libparams-classify-perl libpciaccess0 libpcsclite1 libpipeline1 libpixman-1-0 libpng16-16t64 libpsl5t64 libpython3-stdlib libpython3.11-minimal libpython3.11-stdlib librhino-java librole-tiny-perl librtmp1 libsensors-config libsensors5 libsharpyuv0 libsis-base-java libsis-base-jni libsis-jhdf5-java libsis-jhdf5-jni libsnappy-java libsnappy-jni libsnappy1v5 libssh2-1t64 libsub-quote-perl libsz2 libthai-data libthai0 libtiff6 libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl libvulkan1 libwebp7 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxi6 libxinerama1 libxml2 libxrandr2 libxrender1 libxshmfence1 libxtst6 libxxf86vm1 libz3-4 m4 man-db media-types ncbi-vdb-data netbase openjdk-17-jdk openjdk-17-jdk-headless openjdk-17-jre openjdk-17-jre-headless openssl patchutils perl-openssl-defaults po-debconf python3 python3-minimal python3.11 python3.11-minimal sbuild-build-depends-main-dummy sensible-utils shared-mime-info tzdata wdiff x11-common 0 upgraded, 241 newly installed, 0 to remove and 0 not upgraded. Need to get 224 MB/225 MB of archives. After this operation, 686 MB of additional disk space will be used. Get:1 file:/srv/reprepro perl-5.40/main amd64 libio-pty-perl amd64 1:1.20-1+b2 [34.3 kB] Get:2 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [936 B] Get:3 file:/srv/reprepro perl-5.40/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b4 [36.3 kB] Get:4 file:/srv/reprepro perl-5.40/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b2 [10.6 kB] Get:5 file:/srv/reprepro perl-5.40/main amd64 libdevel-callchecker-perl amd64 0.009-1+b1 [16.1 kB] Get:6 file:/srv/reprepro perl-5.40/main amd64 libparams-classify-perl amd64 0.015-2+b4 [22.4 kB] Get:7 file:/srv/reprepro perl-5.40/main amd64 libhtml-parser-perl amd64 3.82-1+b1 [99.2 kB] Get:8 file:/srv/reprepro perl-5.40/main amd64 libclone-perl amd64 0.46-1+b3 [13.7 kB] Get:9 file:/srv/reprepro perl-5.40/main amd64 libnet-ssleay-perl amd64 1.94-1+b2 [339 kB] Get:10 http://localhost:3142/debian unstable/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get:11 http://localhost:3142/debian unstable/main amd64 binfmt-support amd64 2.2.2-7 [64.3 kB] Get:12 http://localhost:3142/debian unstable/main amd64 libpython3.11-minimal amd64 3.11.9-1 [817 kB] Get:13 http://localhost:3142/debian unstable/main amd64 libexpat1 amd64 2.6.2-1 [103 kB] Get:14 http://localhost:3142/debian unstable/main amd64 python3.11-minimal amd64 3.11.9-1 [1879 kB] Get:15 http://localhost:3142/debian unstable/main amd64 python3-minimal amd64 3.11.8-1 [26.3 kB] Get:16 http://localhost:3142/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get:17 http://localhost:3142/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get:18 http://localhost:3142/debian unstable/main amd64 tzdata all 2024a-4 [255 kB] Get:19 http://localhost:3142/debian unstable/main amd64 libpython3.11-stdlib amd64 3.11.9-1 [1792 kB] Get:20 http://localhost:3142/debian unstable/main amd64 python3.11 amd64 3.11.9-1 [602 kB] Get:21 http://localhost:3142/debian unstable/main amd64 libpython3-stdlib amd64 3.11.8-1 [9332 B] Get:22 http://localhost:3142/debian unstable/main amd64 python3 amd64 3.11.8-1 [27.4 kB] Get:23 http://localhost:3142/debian unstable/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get:24 http://localhost:3142/debian unstable/main amd64 openssl amd64 3.2.1-3 [1360 kB] Get:25 http://localhost:3142/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get:26 http://localhost:3142/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get:27 http://localhost:3142/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get:28 http://localhost:3142/debian unstable/main amd64 file amd64 1:5.45-3 [42.9 kB] Get:29 http://localhost:3142/debian unstable/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get:30 http://localhost:3142/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get:31 http://localhost:3142/debian unstable/main amd64 groff-base amd64 1.23.0-4 [1180 kB] Get:32 http://localhost:3142/debian unstable/main amd64 bsdextrautils amd64 2.40.1-7 [95.9 kB] Get:33 http://localhost:3142/debian unstable/main amd64 man-db amd64 2.12.1-1 [1411 kB] Get:34 http://localhost:3142/debian unstable/main amd64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [311 kB] Get:35 http://localhost:3142/debian unstable/main amd64 libglib2.0-0t64 amd64 2.80.2-2 [1485 kB] Get:36 http://localhost:3142/debian unstable/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get:37 http://localhost:3142/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg-2 [670 kB] Get:38 http://localhost:3142/debian unstable/main amd64 shared-mime-info amd64 2.4-5 [758 kB] Get:39 http://localhost:3142/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3 [167 kB] Get:40 http://localhost:3142/debian unstable/main amd64 libpng16-16t64 amd64 1.6.43-5 [278 kB] Get:41 http://localhost:3142/debian unstable/main amd64 libdeflate0 amd64 1.20-1 [46.0 kB] Get:42 http://localhost:3142/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b1 [32.0 kB] Get:43 http://localhost:3142/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-4+b1 [171 kB] Get:44 http://localhost:3142/debian unstable/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [113 kB] Get:45 http://localhost:3142/debian unstable/main amd64 libwebp7 amd64 1.4.0-0.1 [311 kB] Get:46 http://localhost:3142/debian unstable/main amd64 libtiff6 amd64 4.5.1+git230720-4 [322 kB] Get:47 http://localhost:3142/debian unstable/main amd64 libgdk-pixbuf-2.0-0 amd64 2.42.12+dfsg-1 [139 kB] Get:48 http://localhost:3142/debian unstable/main amd64 gtk-update-icon-cache amd64 3.24.42-1 [46.7 kB] Get:49 http://localhost:3142/debian unstable/main amd64 hicolor-icon-theme all 0.18-1 [12.0 kB] Get:50 http://localhost:3142/debian unstable/main amd64 adwaita-icon-theme all 46.0-1 [614 kB] Get:51 http://localhost:3142/debian unstable/main amd64 ca-certificates-java all 20240118 [11.6 kB] Get:52 http://localhost:3142/debian unstable/main amd64 java-common all 0.75 [6640 B] Get:53 http://localhost:3142/debian unstable/main amd64 liblcms2-2 amd64 2.14-2+b1 [154 kB] Get:54 http://localhost:3142/debian unstable/main amd64 libnspr4 amd64 2:4.35-1.1+b1 [109 kB] Get:55 http://localhost:3142/debian unstable/main amd64 libnss3 amd64 2:3.100-1 [1406 kB] Get:56 http://localhost:3142/debian unstable/main amd64 libpcsclite1 amd64 2.2.3-1 [54.9 kB] Get:57 http://localhost:3142/debian unstable/main amd64 openjdk-17-jre-headless amd64 17.0.11+9-1 [43.8 MB] Get:58 http://localhost:3142/debian unstable/main amd64 default-jre-headless amd64 2:1.17-75 [3068 B] Get:59 http://localhost:3142/debian unstable/main amd64 ant all 1.10.14-1 [2162 kB] Get:60 http://localhost:3142/debian unstable/main amd64 at-spi2-common all 2.52.0-1 [166 kB] Get:61 http://localhost:3142/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get:62 http://localhost:3142/debian unstable/main amd64 autoconf all 2.71-3 [332 kB] Get:63 http://localhost:3142/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:64 http://localhost:3142/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:65 http://localhost:3142/debian unstable/main amd64 autopoint all 0.21-14 [496 kB] Get:66 http://localhost:3142/debian unstable/main amd64 dctrl-tools amd64 2.24-3+b1 [104 kB] Get:67 http://localhost:3142/debian unstable/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get:68 http://localhost:3142/debian unstable/main amd64 libtool all 2.4.7-7 [517 kB] Get:69 http://localhost:3142/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:70 http://localhost:3142/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:71 http://localhost:3142/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get:72 http://localhost:3142/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get:73 http://localhost:3142/debian unstable/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get:74 http://localhost:3142/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:75 http://localhost:3142/debian unstable/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get:76 http://localhost:3142/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:77 http://localhost:3142/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:78 http://localhost:3142/debian unstable/main amd64 debhelper all 13.15.3 [901 kB] Get:79 http://localhost:3142/debian unstable/main amd64 libgtk2.0-common all 2.24.33-4 [2661 kB] Get:80 http://localhost:3142/debian unstable/main amd64 libatk1.0-0t64 amd64 2.52.0-1 [50.8 kB] Get:81 http://localhost:3142/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB] Get:82 http://localhost:3142/debian unstable/main amd64 libfreetype6 amd64 2.13.2+dfsg-1+b4 [439 kB] Get:83 http://localhost:3142/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get:84 http://localhost:3142/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get:85 http://localhost:3142/debian unstable/main amd64 fontconfig-config amd64 2.15.0-1.1 [317 kB] Get:86 http://localhost:3142/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-1.1 [388 kB] Get:87 http://localhost:3142/debian unstable/main amd64 libpixman-1-0 amd64 0.42.2-1+b1 [556 kB] Get:88 http://localhost:3142/debian unstable/main amd64 libxau6 amd64 1:1.0.9-1+b1 [18.1 kB] Get:89 http://localhost:3142/debian unstable/main amd64 libbsd0 amd64 0.12.2-1 [131 kB] Get:90 http://localhost:3142/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3+b1 [24.3 kB] Get:91 http://localhost:3142/debian unstable/main amd64 libxcb1 amd64 1.17.0-2 [144 kB] Get:92 http://localhost:3142/debian unstable/main amd64 libx11-data all 2:1.8.7-1 [328 kB] Get:93 http://localhost:3142/debian unstable/main amd64 libx11-6 amd64 2:1.8.7-1+b1 [799 kB] Get:94 http://localhost:3142/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2 [115 kB] Get:95 http://localhost:3142/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2 [105 kB] Get:96 http://localhost:3142/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get:97 http://localhost:3142/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b1 [27.9 kB] Get:98 http://localhost:3142/debian unstable/main amd64 libcairo2 amd64 1.18.0-3+b1 [531 kB] Get:99 http://localhost:3142/debian unstable/main amd64 libavahi-common-data amd64 0.8-13+b2 [112 kB] Get:100 http://localhost:3142/debian unstable/main amd64 libavahi-common3 amd64 0.8-13+b2 [43.3 kB] Get:101 http://localhost:3142/debian unstable/main amd64 libdbus-1-3 amd64 1.14.10-4+b1 [203 kB] Get:102 http://localhost:3142/debian unstable/main amd64 libavahi-client3 amd64 0.8-13+b2 [47.0 kB] Get:103 http://localhost:3142/debian unstable/main amd64 libkrb5support0 amd64 1.20.1-6+b1 [33.3 kB] Get:104 http://localhost:3142/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1 [22.9 kB] Get:105 http://localhost:3142/debian unstable/main amd64 libk5crypto3 amd64 1.20.1-6+b1 [79.8 kB] Get:106 http://localhost:3142/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get:107 http://localhost:3142/debian unstable/main amd64 libkrb5-3 amd64 1.20.1-6+b1 [333 kB] Get:108 http://localhost:3142/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.20.1-6+b1 [135 kB] Get:109 http://localhost:3142/debian unstable/main amd64 libcups2t64 amd64 2.4.7-1.2+b1 [247 kB] Get:110 http://localhost:3142/debian unstable/main amd64 fontconfig amd64 2.15.0-1.1 [463 kB] Get:111 http://localhost:3142/debian unstable/main amd64 libfribidi0 amd64 1.0.13-3+b1 [71.4 kB] Get:112 http://localhost:3142/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2 [74.9 kB] Get:113 http://localhost:3142/debian unstable/main amd64 libharfbuzz0b amd64 8.3.0-2+b1 [2214 kB] Get:114 http://localhost:3142/debian unstable/main amd64 libthai-data all 0.1.29-2 [168 kB] Get:115 http://localhost:3142/debian unstable/main amd64 libdatrie1 amd64 0.2.13-3 [37.7 kB] Get:116 http://localhost:3142/debian unstable/main amd64 libthai0 amd64 0.1.29-2 [49.1 kB] Get:117 http://localhost:3142/debian unstable/main amd64 libpango-1.0-0 amd64 1.52.2+ds-1 [218 kB] Get:118 http://localhost:3142/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.52.2+ds-1 [48.1 kB] Get:119 http://localhost:3142/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.52.2+ds-1 [35.0 kB] Get:120 http://localhost:3142/debian unstable/main amd64 libxcomposite1 amd64 1:0.4.5-1+b1 [14.9 kB] Get:121 http://localhost:3142/debian unstable/main amd64 libxfixes3 amd64 1:6.0.0-2+b1 [20.3 kB] Get:122 http://localhost:3142/debian unstable/main amd64 libxcursor1 amd64 1:1.2.2-1 [37.1 kB] Get:123 http://localhost:3142/debian unstable/main amd64 libxdamage1 amd64 1:1.1.6-1+b1 [15.5 kB] Get:124 http://localhost:3142/debian unstable/main amd64 libxi6 amd64 2:1.8.1-1 [79.0 kB] Get:125 http://localhost:3142/debian unstable/main amd64 libxinerama1 amd64 2:1.1.4-3+b1 [16.0 kB] Get:126 http://localhost:3142/debian unstable/main amd64 libxrandr2 amd64 2:1.5.4-1 [36.1 kB] Get:127 http://localhost:3142/debian unstable/main amd64 libgtk2.0-0t64 amd64 2.24.33-4 [1816 kB] Get:128 http://localhost:3142/debian unstable/main amd64 libglvnd0 amd64 1.7.0-1+b1 [56.3 kB] Get:129 http://localhost:3142/debian unstable/main amd64 libdrm-common all 2.4.120-2 [7688 B] Get:130 http://localhost:3142/debian unstable/main amd64 libdrm2 amd64 2.4.120-2 [38.1 kB] Get:131 http://localhost:3142/debian unstable/main amd64 libglapi-mesa amd64 24.1.0-2 [36.6 kB] Get:132 http://localhost:3142/debian unstable/main amd64 libx11-xcb1 amd64 2:1.8.7-1+b1 [232 kB] Get:133 http://localhost:3142/debian unstable/main amd64 libxcb-dri2-0 amd64 1.17.0-2 [106 kB] Get:134 http://localhost:3142/debian unstable/main amd64 libxcb-dri3-0 amd64 1.17.0-2 [107 kB] Get:135 http://localhost:3142/debian unstable/main amd64 libxcb-glx0 amd64 1.17.0-2 [122 kB] Get:136 http://localhost:3142/debian unstable/main amd64 libxcb-present0 amd64 1.17.0-2 [105 kB] Get:137 http://localhost:3142/debian unstable/main amd64 libxcb-randr0 amd64 1.17.0-2 [116 kB] Get:138 http://localhost:3142/debian unstable/main amd64 libxcb-sync1 amd64 1.17.0-2 [108 kB] Get:139 http://localhost:3142/debian unstable/main amd64 libxcb-xfixes0 amd64 1.17.0-2 [109 kB] Get:140 http://localhost:3142/debian unstable/main amd64 libxshmfence1 amd64 1.3-1+b1 [8852 B] Get:141 http://localhost:3142/debian unstable/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB] Get:142 http://localhost:3142/debian unstable/main amd64 libvulkan1 amd64 1.3.283.0-1 [125 kB] Get:143 http://localhost:3142/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.120-2 [21.4 kB] Get:144 http://localhost:3142/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b1 [51.9 kB] Get:145 http://localhost:3142/debian unstable/main amd64 libdrm-intel1 amd64 2.4.120-2 [62.7 kB] Get:146 http://localhost:3142/debian unstable/main amd64 libdrm-radeon1 amd64 2.4.120-2 [22.2 kB] Get:147 http://localhost:3142/debian unstable/main amd64 libedit2 amd64 3.1-20240517-1 [93.3 kB] Get:148 http://localhost:3142/debian unstable/main amd64 libz3-4 amd64 4.8.12-3.1+b2 [7346 kB] Get:149 http://localhost:3142/debian unstable/main amd64 libllvm17t64 amd64 1:17.0.6-12 [23.7 MB] Get:150 http://localhost:3142/debian unstable/main amd64 libsensors-config all 1:3.6.0-10 [14.6 kB] Get:151 http://localhost:3142/debian unstable/main amd64 libsensors5 amd64 1:3.6.0-10 [34.7 kB] Get:152 http://localhost:3142/debian unstable/main amd64 libgl1-mesa-dri amd64 24.1.0-2 [8638 kB] Get:153 http://localhost:3142/debian unstable/main amd64 libglx-mesa0 amd64 24.1.0-2 [151 kB] Get:154 http://localhost:3142/debian unstable/main amd64 libglx0 amd64 1.7.0-1+b1 [35.0 kB] Get:155 http://localhost:3142/debian unstable/main amd64 libgl1 amd64 1.7.0-1+b1 [89.8 kB] Get:156 http://localhost:3142/debian unstable/main amd64 libasound2-data all 1.2.11-1 [20.9 kB] Get:157 http://localhost:3142/debian unstable/main amd64 libasound2t64 amd64 1.2.11-1+b1 [369 kB] Get:158 http://localhost:3142/debian unstable/main amd64 libgif7 amd64 5.2.2-1 [43.9 kB] Get:159 http://localhost:3142/debian unstable/main amd64 x11-common all 1:7.7+23 [252 kB] Get:160 http://localhost:3142/debian unstable/main amd64 libxtst6 amd64 2:1.2.3-1.1+b1 [25.9 kB] Get:161 http://localhost:3142/debian unstable/main amd64 openjdk-17-jre amd64 17.0.11+9-1 [185 kB] Get:162 http://localhost:3142/debian unstable/main amd64 default-jre amd64 2:1.17-75 [1056 B] Get:163 http://localhost:3142/debian unstable/main amd64 openjdk-17-jdk-headless amd64 17.0.11+9-1 [71.4 MB] Get:164 http://localhost:3142/debian unstable/main amd64 default-jdk-headless amd64 2:1.17-75 [1108 B] Get:165 http://localhost:3142/debian unstable/main amd64 openjdk-17-jdk amd64 17.0.11+9-1 [10.4 kB] Get:166 http://localhost:3142/debian unstable/main amd64 default-jdk amd64 2:1.17-75 [1068 B] Get:167 http://localhost:3142/debian unstable/main amd64 libfile-dirlist-perl all 0.05-3 [7600 B] Get:168 http://localhost:3142/debian unstable/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:169 http://localhost:3142/debian unstable/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:170 http://localhost:3142/debian unstable/main amd64 libfile-touch-perl all 0.12-2 [8816 B] Get:171 http://localhost:3142/debian unstable/main amd64 libipc-run-perl all 20231003.0-2 [101 kB] Get:172 http://localhost:3142/debian unstable/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:173 http://localhost:3142/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get:174 http://localhost:3142/debian unstable/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:175 http://localhost:3142/debian unstable/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:176 http://localhost:3142/debian unstable/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:177 http://localhost:3142/debian unstable/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:178 http://localhost:3142/debian unstable/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:179 http://localhost:3142/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:180 http://localhost:3142/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:181 http://localhost:3142/debian unstable/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:182 http://localhost:3142/debian unstable/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:183 http://localhost:3142/debian unstable/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:184 http://localhost:3142/debian unstable/main amd64 liburi-perl all 5.28-1 [98.6 kB] Get:185 http://localhost:3142/debian unstable/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:186 http://localhost:3142/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:187 http://localhost:3142/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:188 http://localhost:3142/debian unstable/main amd64 libhttp-message-perl all 6.46-1 [79.7 kB] Get:189 http://localhost:3142/debian unstable/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:190 http://localhost:3142/debian unstable/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:191 http://localhost:3142/debian unstable/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get:192 http://localhost:3142/debian unstable/main amd64 libio-socket-ssl-perl all 2.085-1 [218 kB] Get:193 http://localhost:3142/debian unstable/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:194 http://localhost:3142/debian unstable/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get:195 http://localhost:3142/debian unstable/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:196 http://localhost:3142/debian unstable/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:197 http://localhost:3142/debian unstable/main amd64 libwww-perl all 6.77-1 [183 kB] Get:198 http://localhost:3142/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:199 http://localhost:3142/debian unstable/main amd64 wdiff amd64 1.2.2-6 [119 kB] Get:200 http://localhost:3142/debian unstable/main amd64 devscripts all 2.23.7 [1068 kB] Get:201 http://localhost:3142/debian unstable/main amd64 libfakeroot amd64 1.34-1 [28.9 kB] Get:202 http://localhost:3142/debian unstable/main amd64 fakeroot amd64 1.34-1 [74.0 kB] Get:203 http://localhost:3142/debian unstable/main amd64 fastjar amd64 2:0.98-7 [80.1 kB] Get:204 http://localhost:3142/debian unstable/main amd64 jarwrapper all 0.80 [9692 B] Get:205 http://localhost:3142/debian unstable/main amd64 javahelper all 0.80 [80.4 kB] Get:206 http://localhost:3142/debian unstable/main amd64 libaec0 amd64 1.1.3-1 [23.4 kB] Get:207 http://localhost:3142/debian unstable/main amd64 libapache-pom-java all 29-2 [5276 B] Get:208 http://localhost:3142/debian unstable/main amd64 libargs4j-java all 2.33-2 [138 kB] Get:209 http://localhost:3142/debian unstable/main amd64 libcommons-parent-java all 56-1 [10.8 kB] Get:210 http://localhost:3142/debian unstable/main amd64 libcommons-compress-java all 1.25.0-1 [635 kB] Get:211 http://localhost:3142/debian unstable/main amd64 libcommons-io-java all 2.16.1-1 [480 kB] Get:212 http://localhost:3142/debian unstable/main amd64 libcommons-logging-java all 1.3.0-1 [68.6 kB] Get:213 http://localhost:3142/debian unstable/main amd64 libcommons-jexl2-java all 2.1.1-6 [256 kB] Get:214 http://localhost:3142/debian unstable/main amd64 libcommons-lang3-java all 3.14.0-1 [621 kB] Get:215 http://localhost:3142/debian unstable/main amd64 libcommons-math3-java all 3.6.1-3 [2018 kB] Get:216 http://localhost:3142/debian unstable/main amd64 libnghttp2-14 amd64 1.61.0-1+b1 [75.6 kB] Get:217 http://localhost:3142/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get:218 http://localhost:3142/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get:219 http://localhost:3142/debian unstable/main amd64 libssh2-1t64 amd64 1.11.0-5 [215 kB] Get:220 http://localhost:3142/debian unstable/main amd64 libcurl4t64 amd64 8.8.0-1 [441 kB] Get:221 http://localhost:3142/debian unstable/main amd64 libsz2 amd64 1.1.3-1 [7740 B] Get:222 http://localhost:3142/debian unstable/main amd64 libhdf5-103-1t64 amd64 1.10.10+repack-3.3 [1241 kB] Get:223 http://localhost:3142/debian unstable/main amd64 libmjson-java all 1.4.0-3 [60.4 kB] Get:224 http://localhost:3142/debian unstable/main amd64 libmbedcrypto7t64 amd64 2.28.8-1 [284 kB] Get:225 http://localhost:3142/debian unstable/main amd64 libmbedx509-1t64 amd64 2.28.8-1 [131 kB] Get:226 http://localhost:3142/debian unstable/main amd64 libmbedtls14t64 amd64 2.28.8-1 [167 kB] Get:227 http://localhost:3142/debian unstable/main amd64 ncbi-vdb-data all 3.0.2+dfsg-2 [73.3 kB] Get:228 http://localhost:3142/debian unstable/main amd64 libncbi-vdb3 amd64 3.0.2+dfsg-2+b1 [1049 kB] Get:229 http://localhost:3142/debian unstable/main amd64 libncbi-ngs3 amd64 3.0.3+dfsg-7+b1 [156 kB] Get:230 http://localhost:3142/debian unstable/main amd64 libngs-jni amd64 3.0.3+dfsg-7+b1 [23.9 kB] Get:231 http://localhost:3142/debian unstable/main amd64 libngs-java amd64 3.0.3+dfsg-7+b1 [111 kB] Get:232 http://localhost:3142/debian unstable/main amd64 librhino-java all 1.7.14-2.1 [1357 kB] Get:233 http://localhost:3142/debian unstable/main amd64 libsnappy1v5 amd64 1.2.1-1 [29.1 kB] Get:234 http://localhost:3142/debian unstable/main amd64 libsnappy-jni amd64 1.1.10.5-2 [6396 B] Get:235 http://localhost:3142/debian unstable/main amd64 libsnappy-java all 1.1.10.5-2 [87.5 kB] Get:236 http://localhost:3142/debian unstable/main amd64 libhtsjdk-java all 4.1.0+dfsg-2 [1833 kB] Get:237 http://localhost:3142/debian unstable/main amd64 libjbzip2-java all 0.9.1-8 [42.7 kB] Get:238 http://localhost:3142/debian unstable/main amd64 libsis-base-jni amd64 18.09~pre1+git20180928.45fbd31+dfsg-3 [12.5 kB] Get:239 http://localhost:3142/debian unstable/main amd64 libsis-base-java all 18.09~pre1+git20180928.45fbd31+dfsg-3 [97.8 kB] Get:240 http://localhost:3142/debian unstable/main amd64 libsis-jhdf5-jni amd64 19.04.1+dfsg-4+b1 [97.0 kB] Get:241 http://localhost:3142/debian unstable/main amd64 libsis-jhdf5-java all 19.04.1+dfsg-4 [1491 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 224 MB in 7s (33.3 MB/s) Selecting previously unselected package libpipeline1:amd64. (Reading database ... 21765 files and directories currently installed.) Preparing to unpack .../libpipeline1_1.5.7-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.7-2) ... Selecting previously unselected package binfmt-support. Preparing to unpack .../binfmt-support_2.2.2-7_amd64.deb ... Unpacking binfmt-support (2.2.2-7) ... Selecting previously unselected package libpython3.11-minimal:amd64. Preparing to unpack .../libpython3.11-minimal_3.11.9-1_amd64.deb ... Unpacking libpython3.11-minimal:amd64 (3.11.9-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.2-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.9-1_amd64.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:amd64 (3.11.9-1) ... Setting up libexpat1:amd64 (2.6.2-1) ... Setting up python3.11-minimal (3.11.9-1) ... 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Selecting previously unselected package libsis-jhdf5-java. Preparing to unpack .../227-libsis-jhdf5-java_19.04.1+dfsg-4_all.deb ... Unpacking libsis-jhdf5-java (19.04.1+dfsg-4) ... Selecting previously unselected package sbuild-build-depends-main-dummy. Preparing to unpack .../228-sbuild-build-depends-main-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:amd64 (1.5.7-2) ... Setting up fastjar (2:0.98-7) ... Setting up libgraphite2-3:amd64 (1.3.14-2) ... Setting up liblcms2-2:amd64 (2.14-2+b1) ... Setting up libpixman-1-0:amd64 (0.42.2-1+b1) ... Setting up wdiff (1.2.2-6) ... Setting up libsharpyuv0:amd64 (1.4.0-0.1) ... Setting up libpciaccess0:amd64 (0.17-3+b1) ... Setting up libfile-which-perl (1.27-2) ... Setting up libxau6:amd64 (1:1.0.9-1+b1) ... Setting up libkeyutils1:amd64 (1.6.3-3) ... Setting up libicu72:amd64 (72.1-4+b1) ... Setting up liblerc4:amd64 (4.0.0+ds-4+b1) ... Setting up bsdextrautils (2.40.1-7) ... Setting up hicolor-icon-theme (0.18-1) ... Setting up libmbedcrypto7t64:amd64 (2.28.8-1) ... Setting up java-common (0.75) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libdatrie1:amd64 (0.2.13-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up libio-pty-perl (1:1.20-1+b2) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libclone-perl:amd64 (0.46-1+b3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglvnd0:amd64 (1.7.0-1+b1) ... Setting up libmjson-java (1.4.0-3) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libbrotli1:amd64 (1.1.0-2+b3) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: WARNING: No init system and policy-rc.d missing! Defaulting to block. Setting up libtry-tiny-perl (0.31-2) ... Setting up libsensors-config (1:3.6.0-10) ... Setting up libpsl5t64:amd64 (0.21.2-1.1) ... Setting up libnghttp2-14:amd64 (1.61.0-1+b1) ... Setting up libdeflate0:amd64 (1.20-1) ... Setting up perl-openssl-defaults:amd64 (7+b2) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libcom-err2:amd64 (1.47.1-1) ... Setting up file (1:5.45-3) ... Setting up libjbig0:amd64 (2.1-6.1+b1) ... Setting up libaec0:amd64 (1.1.3-1) ... Setting up libfakeroot:amd64 (1.34-1) ... Setting up libelf1t64:amd64 (0.191-1+b1) ... Setting up libsnappy1v5:amd64 (1.2.1-1) ... Setting up libkrb5support0:amd64 (1.20.1-6+b1) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Mon Jun 3 05:08:33 UTC 2024. Universal Time is now: Mon Jun 3 05:08:33 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up fakeroot (1.34-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up libasound2-data (1.2.11-1) ... Setting up libsis-base-jni (18.09~pre1+git20180928.45fbd31+dfsg-3) ... Setting up librhino-java (1.7.14-2.1) ... Setting up autotools-dev (20220109.1) ... Setting up libz3-4:amd64 (4.8.12-3.1+b2) ... Setting up libglib2.0-0t64:amd64 (2.80.2-2) ... No schema files found: doing nothing. Setting up libasound2t64:amd64 (1.2.11-1+b1) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-3) ... Setting up libx11-data (2:1.8.7-1) ... Setting up libnspr4:amd64 (2:4.35-1.1+b1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libapache-pom-java (29-2) ... Setting up libavahi-common-data:amd64 (0.8-13+b2) ... Setting up libdbus-1-3:amd64 (1.14.10-4+b1) ... Setting up libfribidi0:amd64 (1.0.13-3+b1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:amd64 (1.6.43-5) ... Setting up libio-html-perl (1.004-3) ... Setting up autopoint (0.21-14) ... Setting up binfmt-support (2.2.2-7) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: WARNING: No init system and policy-rc.d missing! Defaulting to block. Setting up libb-hooks-op-check-perl:amd64 (0.22-3+b2) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libjbzip2-java (0.9.1-8) ... Setting up libipc-run-perl (20231003.0-2) ... Setting up libpcsclite1:amd64 (2.2.3-1) ... Setting up libsensors5:amd64 (1:3.6.0-10) ... Setting up libk5crypto3:amd64 (1.20.1-6+b1) ... Setting up libglapi-mesa:amd64 (24.1.0-2) ... Setting up libvulkan1:amd64 (1.3.283.0-1) ... Setting up autoconf (2.71-3) ... Setting up libwebp7:amd64 (1.4.0-0.1) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libgif7:amd64 (5.2.2-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up libxshmfence1:amd64 (1.3-1+b1) ... Setting up at-spi2-common (2.52.0-1) ... Setting up libtiff6:amd64 (4.5.1+git230720-4) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up ncbi-vdb-data (3.0.2+dfsg-2) ... Setting up libthai-data (0.1.29-2) ... Setting up netbase (6.4) ... Configuration file '/etc/protocols' ==> File on system created by you or by a script. ==> File also in package provided by package maintainer. ==> Using current old file as you requested. Configuration file '/etc/services' ==> File on system created by you or by a script. ==> File also in package provided by package maintainer. ==> Using current old file as you requested. Setting up libcommons-math3-java (3.6.1-3) ... Setting up libsub-quote-perl (2.006008-1) ... Setting up libclass-xsaccessor-perl (1.19-4+b4) ... Setting up libgtk2.0-common (2.24.33-4) ... Setting up libkrb5-3:amd64 (1.20.1-6+b1) ... Setting up libssh2-1t64:amd64 (1.11.0-5) ... Setting up libfile-dirlist-perl (0.05-3) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up openssl (3.2.1-3) ... Setting up libbsd0:amd64 (0.12.2-1) ... Setting up libdrm-common (2.4.120-2) ... Setting up libsnappy-jni (1.1.10.5-2) ... Setting up libxml2:amd64 (2.12.7+dfsg-2) ... Setting up liburi-perl (5.28-1) ... Setting up libargs4j-java (2.33-2) ... Setting up libfile-touch-perl (0.12-2) ... Setting up libsz2:amd64 (1.1.3-1) ... Setting up dctrl-tools (2.24-3+b1) ... Setting up libnet-ssleay-perl:amd64 (1.94-1+b2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3+b1) ... Setting up libxcb1:amd64 (1.17.0-2) ... Setting up gettext (0.21-14+b1) ... Setting up libmbedx509-1t64:amd64 (2.28.8-1) ... Setting up libxcb-xfixes0:amd64 (1.17.0-2) ... Setting up libatk1.0-0t64:amd64 (2.52.0-1) ... Setting up libfile-listing-perl (6.16-1) ... Setting up jarwrapper (0.80) ... Setting up libtool (2.4.7-7) ... Setting up libxcb-render0:amd64 (1.17.0-2) ... Setting up fontconfig-config (2.15.0-1.1) ... Setting up libxcb-glx0:amd64 (1.17.0-2) ... Setting up libpython3.11-stdlib:amd64 (3.11.9-1) ... Setting up libedit2:amd64 (3.1-20240517-1) ... Setting up libcommons-parent-java (56-1) ... Setting up libavahi-common3:amd64 (0.8-13+b2) ... Setting up libcommons-logging-java (1.3.0-1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libnss3:amd64 (2:3.100-1) ... Setting up libxcb-shm0:amd64 (1.17.0-2) ... Setting up libdevel-callchecker-perl:amd64 (0.009-1+b1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libxcb-present0:amd64 (1.17.0-2) ... Setting up dh-autoreconf (20) ... Setting up patchutils (0.4.2-1) ... Setting up libcommons-jexl2-java (2.1.1-6) ... Setting up libthai0:amd64 (0.1.29-2) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libllvm17t64:amd64 (1:17.0.6-12) ... Setting up libfreetype6:amd64 (2.13.2+dfsg-1+b4) ... Setting up libxcb-sync1:amd64 (1.17.0-2) ... Setting up shared-mime-info (2.4-5) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-6+b1) ... Setting up libcommons-lang3-java (3.14.0-1) ... Setting up libxcb-dri2-0:amd64 (1.17.0-2) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libdrm2:amd64 (2.4.120-2) ... Setting up libmbedtls14t64:amd64 (2.28.8-1) ... Setting up groff-base (1.23.0-4) ... Setting up libxcb-randr0:amd64 (1.17.0-2) ... Setting up libhtml-parser-perl:amd64 (3.82-1+b1) ... Setting up libx11-6:amd64 (2:1.8.7-1+b1) ... Setting up libharfbuzz0b:amd64 (8.3.0-2+b1) ... Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1) ... Setting up libsnappy-java (1.1.10.5-2) ... Setting up libfontconfig1:amd64 (2.15.0-1.1) ... Setting up ca-certificates-java (20240118) ... No JRE found. Skipping Java certificates setup. Setting up libxcomposite1:amd64 (1:0.4.5-1+b1) ... Setting up libavahi-client3:amd64 (0.8-13+b2) ... Setting up libio-socket-ssl-perl (2.085-1) ... Setting up libpython3-stdlib:amd64 (3.11.8-1) ... Setting up libhttp-message-perl (6.46-1) ... Setting up libdrm-amdgpu1:amd64 (2.4.120-2) ... Setting up libxcb-dri3-0:amd64 (1.17.0-2) ... Setting up gtk-update-icon-cache (3.24.42-1) ... Setting up libx11-xcb1:amd64 (2:1.8.7-1+b1) ... Setting up python3.11 (3.11.9-1) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up fontconfig (2.15.0-1.1) ... Regenerating fonts cache... done. Setting up libxdamage1:amd64 (1:1.1.6-1+b1) ... Setting up libxrender1:amd64 (1:0.9.10-1.1+b1) ... Setting up libcommons-compress-java (1.25.0-1) ... Setting up libcurl4t64:amd64 (8.8.0-1) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libcommons-io-java (2.16.1-1) ... Setting up libdrm-radeon1:amd64 (2.4.120-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b4) ... Setting up libpango-1.0-0:amd64 (1.52.2+ds-1) ... Setting up libdrm-intel1:amd64 (2.4.120-2) ... Setting up libgl1-mesa-dri:amd64 (24.1.0-2) ... Setting up libncbi-vdb3:amd64 (3.0.2+dfsg-2+b1) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up python3 (3.11.8-1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:amd64 (1.18.0-3+b1) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Setting up adwaita-icon-theme (46.0-1) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libmodule-runtime-perl (0.016-2) ... Setting up libxfixes3:amd64 (1:6.0.0-2+b1) ... Setting up libxinerama1:amd64 (2:1.1.4-3+b1) ... Setting up libxrandr2:amd64 (2:1.5.4-1) ... Setting up openjdk-17-jre-headless:amd64 (17.0.11+9-1) ... update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up libsis-base-java (18.09~pre1+git20180928.45fbd31+dfsg-3) ... Setting up libpangoft2-1.0-0:amd64 (1.52.2+ds-1) ... Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-3.3) ... Setting up libcups2t64:amd64 (2.4.7-1.2+b1) ... Setting up libpangocairo-1.0-0:amd64 (1.52.2+ds-1) ... Setting up libncbi-ngs3:amd64 (3.0.3+dfsg-7+b1) ... Setting up libngs-jni:amd64 (3.0.3+dfsg-7+b1) ... Setting up libglx-mesa0:amd64 (24.1.0-2) ... Setting up libxi6:amd64 (2:1.8.1-1) ... Setting up libglx0:amd64 (1.7.0-1+b1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libxtst6:amd64 (2:1.2.3-1.1+b1) ... Setting up libmoo-perl (2.005005-1) ... Setting up libxcursor1:amd64 (1:1.2.2-1) ... Setting up debhelper (13.15.3) ... Setting up libgl1:amd64 (1.7.0-1+b1) ... Setting up libgtk2.0-0t64:amd64 (2.24.33-4) ... Setting up libsis-jhdf5-jni (19.04.1+dfsg-4+b1) ... Setting up libngs-java:amd64 (3.0.3+dfsg-7+b1) ... Setting up libhtsjdk-java (4.1.0+dfsg-2) ... Setting up libsis-jhdf5-java (19.04.1+dfsg-4) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libwww-perl (6.77-1) ... Setting up devscripts (2.23.7) ... Setting up javahelper (0.80) ... Processing triggers for libc-bin (2.38-12) ... Processing triggers for ca-certificates-java (20240118) ... Adding debian:ACCVRAIZ1.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:AffirmTrust_Premium.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:BJCA_Global_Root_CA1.pem Adding debian:BJCA_Global_Root_CA2.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:Certainly_Root_E1.pem Adding debian:Certainly_Root_R1.pem Adding debian:Certigna.pem Adding debian:Certigna_Root_CA.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:CommScope_Public_Trust_ECC_Root-01.pem Adding debian:CommScope_Public_Trust_ECC_Root-02.pem Adding debian:CommScope_Public_Trust_RSA_Root-01.pem Adding debian:CommScope_Public_Trust_RSA_Root-02.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:D-TRUST_BR_Root_CA_1_2020.pem Adding debian:D-TRUST_EV_Root_CA_1_2020.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:Entrust_Root_Certification_Authority_-_G4.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:GLOBALTRUST_2020.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:GTS_Root_R1.pem Adding debian:GTS_Root_R2.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R4.pem Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:HiPKI_Root_CA_-_G1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:ISRG_Root_X1.pem Adding debian:ISRG_Root_X2.pem Adding debian:Izenpe.com.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem Adding debian:Secure_Global_CA.pem Adding debian:SecureSign_RootCA11.pem Adding debian:SecureTrust_CA.pem Adding debian:Security_Communication_ECC_RootCA1.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Security_Communication_RootCA3.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Telia_Root_CA_v2.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:TrustAsia_Global_Root_CA_G3.pem Adding debian:TrustAsia_Global_Root_CA_G4.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:TunTrust_Root_CA.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:vTrus_ECC_Root_CA.pem Adding debian:vTrus_Root_CA.pem Adding debian:XRamp_Global_CA_Root.pem done. Setting up openjdk-17-jdk-headless:amd64 (17.0.11+9-1) ... update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode Setting up ant (1.10.14-1) ... Setting up default-jre-headless (2:1.17-75) ... Setting up openjdk-17-jre:amd64 (17.0.11+9-1) ... Setting up default-jre (2:1.17-75) ... Setting up openjdk-17-jdk:amd64 (17.0.11+9-1) ... update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode Setting up default-jdk-headless (2:1.17-75) ... Setting up default-jdk (2:1.17-75) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for ca-certificates-java (20240118) ... done. +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-21-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) amd64 (x86_64) Toolchain package versions: binutils_2.42-4 dpkg-dev_1.22.6 g++-13_13.2.0-25 gcc-13_13.2.0-25 libc6-dev_2.38-12 libstdc++-13-dev_13.2.0-25 libstdc++6_14.1.0-1 linux-libc-dev_6.8.12-1 Package versions: adduser_3.137 adwaita-icon-theme_46.0-1 ant_1.10.14-1 apt_2.9.4 at-spi2-common_2.52.0-1 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-14 autotools-dev_20220109.1 base-files_13.2 base-passwd_3.6.3 bash_5.2.21-2+b1 binfmt-support_2.2.2-7 binutils_2.42-4 binutils-common_2.42-4 binutils-x86-64-linux-gnu_2.42-4 bsdextrautils_2.40.1-7 bsdutils_1:2.40.1-7 build-essential_12.10 bzip2_1.0.8-5.1 ca-certificates_20240203 ca-certificates-java_20240118 coreutils_9.4-3.1 cpp_4:13.2.0-7 cpp-13_13.2.0-25 cpp-13-x86-64-linux-gnu_13.2.0-25 cpp-x86-64-linux-gnu_4:13.2.0-7 dash_0.5.12-8 dctrl-tools_2.24-3+b1 debconf_1.5.86 debhelper_13.15.3 debian-archive-keyring_2023.4 debianutils_5.17 default-jdk_2:1.17-75 default-jdk-headless_2:1.17-75 default-jre_2:1.17-75 default-jre-headless_2:1.17-75 devscripts_2.23.7 dh-autoreconf_20 dh-strip-nondeterminism_1.14.0-1 diffutils_1:3.10-1 dirmngr_2.2.43-7 dpkg_1.22.6 dpkg-dev_1.22.6 dwz_0.15-1+b1 eatmydata_131-2 fakeroot_1.34-1 fastjar_2:0.98-7 file_1:5.45-3 findutils_4.9.0-6 fontconfig_2.15.0-1.1 fontconfig-config_2.15.0-1.1 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 g++_4:13.2.0-7 g++-13_13.2.0-25 g++-13-x86-64-linux-gnu_13.2.0-25 g++-x86-64-linux-gnu_4:13.2.0-7 gcc_4:13.2.0-7 gcc-13_13.2.0-25 gcc-13-base_13.2.0-25 gcc-13-x86-64-linux-gnu_13.2.0-25 gcc-14-base_14.1.0-1 gcc-x86-64-linux-gnu_4:13.2.0-7 gettext_0.21-14+b1 gettext-base_0.21-14+b1 gnupg_2.2.43-7 gnupg-l10n_2.2.43-7 gnupg-utils_2.2.43-7 gpg_2.2.43-7 gpg-agent_2.2.43-7 gpg-wks-client_2.2.43-7 gpgconf_2.2.43-7 gpgsm_2.2.43-7 gpgv_2.2.43-7 grep_3.11-4 groff-base_1.23.0-4 gtk-update-icon-cache_3.24.42-1 gzip_1.12-1.1 hicolor-icon-theme_0.18-1 hostname_3.23+nmu2 init-system-helpers_1.66 intltool-debian_0.35.0+20060710.6 jarwrapper_0.80 java-common_0.75 javahelper_0.80 libacl1_2.3.2-2 libaec0_1.1.3-1 libapache-pom-java_29-2 libapt-pkg6.0t64_2.9.4 libarchive-zip-perl_1.68-1 libargs4j-java_2.33-2 libasan8_14.1.0-1 libasound2-data_1.2.11-1 libasound2t64_1.2.11-1+b1 libassuan0_2.5.6-1+b1 libatk1.0-0t64_2.52.0-1 libatomic1_14.1.0-1 libattr1_1:2.5.2-1 libaudit-common_1:3.1.2-2.1 libaudit1_1:3.1.2-2.1 libavahi-client3_0.8-13+b2 libavahi-common-data_0.8-13+b2 libavahi-common3_0.8-13+b2 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libdrm-intel1_2.4.120-2 libdrm-radeon1_2.4.120-2 libdrm2_2.4.120-2 libdynaloader-functions-perl_0.003-3 libeatmydata1_131-2 libedit2_3.1-20240517-1 libelf1t64_0.191-1+b1 libencode-locale-perl_1.05-3 libexpat1_2.6.2-1 libfakeroot_1.34-1 libffi8_3.4.6-1 libfile-dirlist-perl_0.05-3 libfile-homedir-perl_1.006-2 libfile-listing-perl_6.16-1 libfile-stripnondeterminism-perl_1.14.0-1 libfile-touch-perl_0.12-2 libfile-which-perl_1.27-2 libfontconfig1_2.15.0-1.1 libfreetype6_2.13.2+dfsg-1+b4 libfribidi0_1.0.13-3+b1 libgcc-13-dev_13.2.0-25 libgcc-s1_14.1.0-1 libgcrypt20_1.10.3-3 libgdbm-compat4t64_1.23-5.1+b1 libgdbm6t64_1.23-5.1+b1 libgdk-pixbuf-2.0-0_2.42.12+dfsg-1 libgdk-pixbuf2.0-common_2.42.12+dfsg-1 libgif7_5.2.2-1 libgl1_1.7.0-1+b1 libgl1-mesa-dri_24.1.0-2 libglapi-mesa_24.1.0-2 libglib2.0-0t64_2.80.2-2 libglvnd0_1.7.0-1+b1 libglx-mesa0_24.1.0-2 libglx0_1.7.0-1+b1 libgmp10_2:6.3.0+dfsg-2+b1 libgnutls30t64_3.8.5-4 libgomp1_14.1.0-1 libgpg-error0_1.49-2 libgprofng0_2.42-4 libgraphite2-3_1.3.14-2 libgssapi-krb5-2_1.20.1-6+b1 libgtk2.0-0t64_2.24.33-4 libgtk2.0-common_2.24.33-4 libharfbuzz0b_8.3.0-2+b1 libhdf5-103-1t64_1.10.10+repack-3.3 libhogweed6t64_3.9.1-2.2 libhtml-parser-perl_3.82-1+b1 libhtml-tagset-perl_3.24-1 libhtml-tree-perl_5.07-3 libhtsjdk-java_4.1.0+dfsg-2 libhttp-cookies-perl_6.11-1 libhttp-date-perl_6.06-1 libhttp-message-perl_6.46-1 libhttp-negotiate-perl_6.01-2 libhwasan0_14.1.0-1 libicu72_72.1-4+b1 libidn2-0_2.3.7-2 libimport-into-perl_1.002005-2 libio-html-perl_1.004-3 libio-pty-perl_1:1.20-1+b2 libio-socket-ssl-perl_2.085-1 libipc-run-perl_20231003.0-2 libisl23_0.26-3+b2 libitm1_14.1.0-1 libjansson4_2.14-2+b2 libjbig0_2.1-6.1+b1 libjbzip2-java_0.9.1-8 libjpeg62-turbo_1:2.1.5-3 libk5crypto3_1.20.1-6+b1 libkeyutils1_1.6.3-3 libkrb5-3_1.20.1-6+b1 libkrb5support0_1.20.1-6+b1 libksba8_1.6.6-1 liblcms2-2_2.14-2+b1 libldap-2.5-0_2.5.17+dfsg-1+b1 liblerc4_4.0.0+ds-4+b1 libllvm17t64_1:17.0.6-12 liblsan0_14.1.0-1 liblwp-mediatypes-perl_6.04-2 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libsystemd0_256~rc3-7 libsz2_1.1.3-1 libtasn1-6_4.19.0-3+b2 libthai-data_0.1.29-2 libthai0_0.1.29-2 libtiff6_4.5.1+git230720-4 libtimedate-perl_2.3300-2 libtinfo6_6.5-2 libtool_2.4.7-7 libtry-tiny-perl_0.31-2 libtsan2_14.1.0-1 libubsan1_14.1.0-1 libuchardet0_0.0.8-1+b1 libudev1_256~rc3-7 libunistring5_1.2-1 liburi-perl_5.28-1 libuuid1_2.40.1-7 libvulkan1_1.3.283.0-1 libwebp7_1.4.0-0.1 libwww-perl_6.77-1 libwww-robotrules-perl_6.02-1 libx11-6_2:1.8.7-1+b1 libx11-data_2:1.8.7-1 libx11-xcb1_2:1.8.7-1+b1 libxau6_1:1.0.9-1+b1 libxcb-dri2-0_1.17.0-2 libxcb-dri3-0_1.17.0-2 libxcb-glx0_1.17.0-2 libxcb-present0_1.17.0-2 libxcb-randr0_1.17.0-2 libxcb-render0_1.17.0-2 libxcb-shm0_1.17.0-2 libxcb-sync1_1.17.0-2 libxcb-xfixes0_1.17.0-2 libxcb1_1.17.0-2 libxcomposite1_1:0.4.5-1+b1 libxcursor1_1:1.2.2-1 libxdamage1_1:1.1.6-1+b1 libxdmcp6_1:1.1.2-3+b1 libxext6_2:1.3.4-1+b1 libxfixes3_1:6.0.0-2+b1 libxi6_2:1.8.1-1 libxinerama1_2:1.1.4-3+b1 libxml2_2.12.7+dfsg-2 libxrandr2_2:1.5.4-1 libxrender1_1:0.9.10-1.1+b1 libxshmfence1_1.3-1+b1 libxtst6_2:1.2.3-1.1+b1 libxxf86vm1_1:1.1.4-1+b2 libxxhash0_0.8.2-2+b1 libz3-4_4.8.12-3.1+b2 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.8.12-1 locales-all_2.38-12 login_1:4.13+dfsg1-5 m4_1.4.19-4 make_4.3-4.1 man-db_2.12.1-1 mawk_1.3.4.20240123-1 media-types_10.1.0 ncbi-vdb-data_3.0.2+dfsg-2 ncurses-base_6.5-2 ncurses-bin_6.5-2 netbase_6.4 openjdk-17-jdk_17.0.11+9-1 openjdk-17-jdk-headless_17.0.11+9-1 openjdk-17-jre_17.0.11+9-1 openjdk-17-jre-headless_17.0.11+9-1 openssl_3.2.1-3 passwd_1:4.13+dfsg1-5 patch_2.7.6-7 patchutils_0.4.2-1 perl_5.40.0~rc1-1 perl-base_5.40.0~rc1-1 perl-modules-5.38_5.38.2-5 perl-modules-5.40_5.40.0~rc1-1 perl-openssl-defaults_7+b2 pinentry-curses_1.2.1-3+b2 po-debconf_1.0.21+nmu1 python3_3.11.8-1 python3-minimal_3.11.8-1 python3.11_3.11.9-1 python3.11-minimal_3.11.9-1 readline-common_8.2-4 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.22 shared-mime-info_2.4-5 sysvinit-utils_3.09-1 tar_1.35+dfsg-3 tzdata_2024a-4 usr-is-merged_39 util-linux_2.40.1-7 wdiff_1.2.2-6 x11-common_1:7.7+23 xz-utils_5.6.1+really5.4.5-1 zlib1g_1:1.3.dfsg+really1.3.1-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: fastqc Binary: fastqc Architecture: all Version: 0.12.1+dfsg-3 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Andreas Tille , Olivier Sallou Homepage: https://www.bioinformatics.babraham.ac.uk/projects/fastqc/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/fastqc Vcs-Git: https://salsa.debian.org/med-team/fastqc.git Testsuite: autopkgtest Testsuite-Triggers: unzip Build-Depends: debhelper-compat (= 13), javahelper, default-jdk, ant, libhtsjdk-java, libjbzip2-java, libcommons-math3-java, libsis-jhdf5-java Package-List: fastqc deb science optional arch=all Checksums-Sha1: e2e69ecdad67c0ea28a1f32822b1299b2025f812 303884 fastqc_0.12.1+dfsg.orig.tar.xz 23fe813b4a0bdd3727440e770aff0e4cf3ceffed 15360 fastqc_0.12.1+dfsg-3.debian.tar.xz Checksums-Sha256: e6ddc23aa7c2e45b99564e1bcb58b9ad173b9a529e306366c1037c7a2edbb1f5 303884 fastqc_0.12.1+dfsg.orig.tar.xz 2b383a73ff9ddbaa6954edd5a782dfbaf1dbb0c84b0d2ac4ab10a9f1a96093b1 15360 fastqc_0.12.1+dfsg-3.debian.tar.xz Files: 674cf57d8e899e286fc1a9fa88aba82f 303884 fastqc_0.12.1+dfsg.orig.tar.xz 267d1c8ed3428289f2d8dd2ccc2dc70e 15360 fastqc_0.12.1+dfsg-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEE5Qr9Va3SequXFjqLIdIFiZdLPpYFAmSGUngUHHRtYW5jaWxs QGRlYmlhbi5vcmcACgkQIdIFiZdLPpbMQBAAnWKhsXB9zc/ZIiWEVLjGvGCws7xv rUMZfy5XjrZFwvVWtcB6BkvTxVpMRHQEcwL98P6/qL6WVdjR9RAYfZGRfZo3pgDP lX7qfkDSnptLctzmSMDC0dGkMTDOy77Krq7wPHu97zHhwyV9drPP9BIcRKEXmgvW mqGTtcNFLuaviCSgHGTiQFvvEJ640G7UpL+Lt4N/qFyiD7d44Grs8e9brc2tjA6a 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using patch list from debian/patches/series dpkg-source: info: applying build_xml.patch dpkg-source: info: applying fastqc.patch dpkg-source: info: applying fix-help-call.patch dpkg-source: info: applying set_configuration_path.patch Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Timed Build Commands | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/starting-build-commands/no-network fastqc_0.12.1+dfsg-3 perl-5.40-throwaway amd64 --------------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/starting-build-commands/no-network fastqc_0.12.1+dfsg-3 perl-5.40-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_GB.UTF-8 LANGUAGE=en_GB:en LC_ALL=C.UTF-8 LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so LOGNAME=debomatic PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/<> SCHROOT_ALIAS_NAME=perl-5.40-throwaway-amd64-debomatic SCHROOT_CHROOT_NAME=perl-5.40-amd64-debomatic SCHROOT_COMMAND=env SCHROOT_GID=110 SCHROOT_GROUP=sbuild SCHROOT_SESSION_ID=perl-5.40-amd64-debomatic-7aaed1ed-64ff-4ba7-b7f4-72deb58bd7a2 SCHROOT_UID=1002 SCHROOT_USER=debomatic SHELL=/bin/sh USER=debomatic dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -Zxz dpkg-buildpackage: info: source package fastqc dpkg-buildpackage: info: source version 0.12.1+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by tony mancill dpkg-source -Zxz --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with javahelper dh_auto_clean ant clean Buildfile: /<>/build.xml clean: BUILD SUCCESSFUL Total time: 0 seconds jh_clean Duplicate specification "u=s" for option "u" dh_clean dpkg-source -Zxz -b . dpkg-source: info: using source format '3.0 (quilt)' dpkg-source: info: building fastqc using existing ./fastqc_0.12.1+dfsg.orig.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: building fastqc in fastqc_0.12.1+dfsg-3.debian.tar.xz dpkg-source: info: building fastqc in fastqc_0.12.1+dfsg-3.dsc debian/rules binary dh binary --with javahelper dh_update_autotools_config dh_autoreconf dh_auto_configure jh_linkjars debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build ant -Duser.name debian Buildfile: /<>/build.xml build-subprojects: init: [mkdir] Created dir: /<>/bin [copy] Copying 95 files to /<>/bin build-project: [echo] FastQC: /<>/build.xml [javac] Compiling 70 source files to /<>/bin [javac] warning: [options] system modules path not set in conjunction with -source 11 [javac] Note: /<>/uk/ac/babraham/FastQC/FastQCMenuBar.java uses or overrides a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. [javac] 1 warning build: BUILD SUCCESSFUL Total time: 4 seconds cd bin && jar cf fastqc.jar `find uk -name "*.class" -o -name "*.png"` `find net -name "*.class" -o -name "*.png"` Templates # Configuration Help make[1]: Leaving directory '/<>' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/fastqc/ dh_install jh_installjavadoc dh_installdocs debian/rules override_dh_installchangelogs make[1]: Entering directory '/<>' dh_installchangelogs RELEASE_NOTES.txt make[1]: Leaving directory '/<>' dh_installexamples dh_installman dh_icons dh_perl dh_link jh_installlibs jh_classpath jh_manifest jh_exec jh_depends dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dpkg-gencontrol: warning: package fastqc: substitution variable ${perl:Depends} unused, but is defined dh_md5sums dh_builddeb dpkg-deb: building package 'fastqc' in '../fastqc_0.12.1+dfsg-3_all.deb'. dpkg-genbuildinfo -O../fastqc_0.12.1+dfsg-3_amd64.buildinfo dpkg-genchanges -O../fastqc_0.12.1+dfsg-3_amd64.changes dpkg-genchanges: info: not including original source code in upload dpkg-source -Zxz --after-build . dpkg-buildpackage: info: binary and diff upload (original source NOT included) -------------------------------------------------------------------------------- Build finished at 2024-06-03T05:09:09Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ fastqc_0.12.1+dfsg-3_amd64.changes: ----------------------------------- Format: 1.8 Date: Sun, 11 Jun 2023 16:00:14 -0700 Source: fastqc Binary: fastqc Architecture: source all Version: 0.12.1+dfsg-3 Distribution: perl-5.40-throwaway Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: tony mancill Description: fastqc - quality control for high throughput sequence data Changes: fastqc (0.12.1+dfsg-3) unstable; urgency=medium . * Team upload. * Upload to unstable Checksums-Sha1: 382b894c9156c8b8413dbb91ac1cd3d9f619180f 1303 fastqc_0.12.1+dfsg-3.dsc 23fe813b4a0bdd3727440e770aff0e4cf3ceffed 15360 fastqc_0.12.1+dfsg-3.debian.tar.xz 9bf3a8c71f1ac6e1715ad08cbdac0f4cec60236c 399332 fastqc_0.12.1+dfsg-3_all.deb 7d79d53272611c43e40bf193fefe02b0245753f7 12338 fastqc_0.12.1+dfsg-3_amd64.buildinfo Checksums-Sha256: 9c27f21405e3d777d5abea765d97ea41a9ae16a4b140e253afcb4155cc373224 1303 fastqc_0.12.1+dfsg-3.dsc 2b383a73ff9ddbaa6954edd5a782dfbaf1dbb0c84b0d2ac4ab10a9f1a96093b1 15360 fastqc_0.12.1+dfsg-3.debian.tar.xz f39b06746dc5548adc8bd69884dcf240c6f9fe871168add900de6aab96ff025c 399332 fastqc_0.12.1+dfsg-3_all.deb 72c4a27dd122bd3383ab0f6e9d9b17a3b4fa75d87559205d29adf7caaa6f45e9 12338 fastqc_0.12.1+dfsg-3_amd64.buildinfo Files: f1f3b09884cd77e9952850a5205e1a3d 1303 science optional fastqc_0.12.1+dfsg-3.dsc 267d1c8ed3428289f2d8dd2ccc2dc70e 15360 science optional fastqc_0.12.1+dfsg-3.debian.tar.xz 6a4050639287673a6b85b3fbaf1b3c80 399332 science optional fastqc_0.12.1+dfsg-3_all.deb 2b3eaebde8c657b30b0ab855995caaec 12338 science optional fastqc_0.12.1+dfsg-3_amd64.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: fastqc Binary: fastqc Architecture: all source Version: 0.12.1+dfsg-3 Checksums-Md5: f1f3b09884cd77e9952850a5205e1a3d 1303 fastqc_0.12.1+dfsg-3.dsc 6a4050639287673a6b85b3fbaf1b3c80 399332 fastqc_0.12.1+dfsg-3_all.deb Checksums-Sha1: 382b894c9156c8b8413dbb91ac1cd3d9f619180f 1303 fastqc_0.12.1+dfsg-3.dsc 9bf3a8c71f1ac6e1715ad08cbdac0f4cec60236c 399332 fastqc_0.12.1+dfsg-3_all.deb Checksums-Sha256: 9c27f21405e3d777d5abea765d97ea41a9ae16a4b140e253afcb4155cc373224 1303 fastqc_0.12.1+dfsg-3.dsc f39b06746dc5548adc8bd69884dcf240c6f9fe871168add900de6aab96ff025c 399332 fastqc_0.12.1+dfsg-3_all.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Mon, 03 Jun 2024 05:09:08 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: adduser (= 3.137), adwaita-icon-theme (= 46.0-1), ant (= 1.10.14-1), at-spi2-common (= 2.52.0-1), autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-14), autotools-dev (= 20220109.1), base-files (= 13.2), base-passwd (= 3.6.3), bash (= 5.2.21-2+b1), binfmt-support (= 2.2.2-7), binutils (= 2.42-4), binutils-common (= 2.42-4), binutils-x86-64-linux-gnu (= 2.42-4), bsdextrautils (= 2.40.1-7), bsdutils (= 1:2.40.1-7), build-essential (= 12.10), bzip2 (= 1.0.8-5.1), ca-certificates (= 20240203), ca-certificates-java (= 20240118), coreutils (= 9.4-3.1), cpp (= 4:13.2.0-7), cpp-13 (= 13.2.0-25), cpp-13-x86-64-linux-gnu (= 13.2.0-25), cpp-x86-64-linux-gnu (= 4:13.2.0-7), dash (= 0.5.12-8), dctrl-tools (= 2.24-3+b1), debconf (= 1.5.86), debhelper (= 13.15.3), debianutils (= 5.17), default-jdk (= 2:1.17-75), default-jdk-headless (= 2:1.17-75), default-jre (= 2:1.17-75), default-jre-headless (= 2:1.17-75), devscripts (= 2.23.7), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.0-1), diffutils (= 1:3.10-1), dirmngr (= 2.2.43-7), dpkg (= 1.22.6), dpkg-dev (= 1.22.6), dwz (= 0.15-1+b1), fastjar (= 2:0.98-7), file (= 1:5.45-3), findutils (= 4.9.0-6), fontconfig (= 2.15.0-1.1), fontconfig-config (= 2.15.0-1.1), fonts-dejavu-core (= 2.37-8), fonts-dejavu-mono (= 2.37-8), g++ (= 4:13.2.0-7), g++-13 (= 13.2.0-25), g++-13-x86-64-linux-gnu (= 13.2.0-25), g++-x86-64-linux-gnu (= 4:13.2.0-7), gcc (= 4:13.2.0-7), gcc-13 (= 13.2.0-25), gcc-13-base (= 13.2.0-25), gcc-13-x86-64-linux-gnu (= 13.2.0-25), gcc-14-base (= 14.1.0-1), gcc-x86-64-linux-gnu (= 4:13.2.0-7), gettext (= 0.21-14+b1), gettext-base (= 0.21-14+b1), gnupg (= 2.2.43-7), gnupg-l10n (= 2.2.43-7), gpg (= 2.2.43-7), gpg-agent (= 2.2.43-7), gpgconf (= 2.2.43-7), gpgsm (= 2.2.43-7), gpgv (= 2.2.43-7), grep (= 3.11-4), groff-base (= 1.23.0-4), gtk-update-icon-cache (= 3.24.42-1), gzip (= 1.12-1.1), hicolor-icon-theme (= 0.18-1), hostname (= 3.23+nmu2), init-system-helpers (= 1.66), intltool-debian (= 0.35.0+20060710.6), jarwrapper (= 0.80), java-common (= 0.75), javahelper (= 0.80), libacl1 (= 2.3.2-2), libaec0 (= 1.1.3-1), libapache-pom-java (= 29-2), libarchive-zip-perl (= 1.68-1), libargs4j-java (= 2.33-2), libasan8 (= 14.1.0-1), libasound2-data (= 1.2.11-1), libasound2t64 (= 1.2.11-1+b1), libassuan0 (= 2.5.6-1+b1), libatk1.0-0t64 (= 2.52.0-1), libatomic1 (= 14.1.0-1), libattr1 (= 1:2.5.2-1), libaudit-common (= 1:3.1.2-2.1), libaudit1 (= 1:3.1.2-2.1), libavahi-client3 (= 0.8-13+b2), libavahi-common-data (= 0.8-13+b2), libavahi-common3 (= 0.8-13+b2), libb-hooks-op-check-perl (= 0.22-3+b2), libbinutils (= 2.42-4), libblkid1 (= 2.40.1-7), libbrotli1 (= 1.1.0-2+b3), libbsd0 (= 0.12.2-1), libbz2-1.0 (= 1.0.8-5.1), libc-bin (= 2.38-12), libc-dev-bin (= 2.38-12), libc6 (= 2.38-12), libc6-dev (= 2.38-12), libcairo2 (= 1.18.0-3+b1), libcap-ng0 (= 0.8.5-1), libcap2 (= 1:2.66-5), libcc1-0 (= 14.1.0-1), libclass-method-modifiers-perl (= 2.15-1), libclass-xsaccessor-perl (= 1.19-4+b4), libclone-perl (= 0.46-1+b3), libcom-err2 (= 1.47.1-1), libcommons-compress-java (= 1.25.0-1), libcommons-io-java (= 2.16.1-1), libcommons-jexl2-java (= 2.1.1-6), libcommons-lang3-java (= 3.14.0-1), libcommons-logging-java (= 1.3.0-1), libcommons-math3-java (= 3.6.1-3), libcommons-parent-java (= 56-1), libcrypt-dev (= 1:4.4.36-4), libcrypt1 (= 1:4.4.36-4), libctf-nobfd0 (= 2.42-4), libctf0 (= 2.42-4), libcups2t64 (= 2.4.7-1.2+b1), libcurl4t64 (= 8.8.0-1), libdatrie1 (= 0.2.13-3), libdb5.3t64 (= 5.3.28+dfsg2-7), libdbus-1-3 (= 1.14.10-4+b1), libdebconfclient0 (= 0.272), libdebhelper-perl (= 13.15.3), libdeflate0 (= 1.20-1), libdevel-callchecker-perl (= 0.009-1+b1), libdpkg-perl (= 1.22.6), libdrm-amdgpu1 (= 2.4.120-2), libdrm-common (= 2.4.120-2), libdrm-intel1 (= 2.4.120-2), libdrm-radeon1 (= 2.4.120-2), libdrm2 (= 2.4.120-2), libdynaloader-functions-perl (= 0.003-3), libedit2 (= 3.1-20240517-1), libelf1t64 (= 0.191-1+b1), libencode-locale-perl (= 1.05-3), libexpat1 (= 2.6.2-1), libffi8 (= 3.4.6-1), libfile-dirlist-perl (= 0.05-3), libfile-homedir-perl (= 1.006-2), libfile-listing-perl (= 6.16-1), libfile-stripnondeterminism-perl (= 1.14.0-1), libfile-touch-perl (= 0.12-2), libfile-which-perl (= 1.27-2), libfontconfig1 (= 2.15.0-1.1), libfreetype6 (= 2.13.2+dfsg-1+b4), libfribidi0 (= 1.0.13-3+b1), libgcc-13-dev (= 13.2.0-25), libgcc-s1 (= 14.1.0-1), libgcrypt20 (= 1.10.3-3), libgdbm-compat4t64 (= 1.23-5.1+b1), libgdbm6t64 (= 1.23-5.1+b1), libgdk-pixbuf-2.0-0 (= 2.42.12+dfsg-1), libgdk-pixbuf2.0-common (= 2.42.12+dfsg-1), libgif7 (= 5.2.2-1), libgl1 (= 1.7.0-1+b1), libgl1-mesa-dri (= 24.1.0-2), libglapi-mesa (= 24.1.0-2), libglib2.0-0t64 (= 2.80.2-2), libglvnd0 (= 1.7.0-1+b1), libglx-mesa0 (= 24.1.0-2), libglx0 (= 1.7.0-1+b1), libgmp10 (= 2:6.3.0+dfsg-2+b1), libgnutls30t64 (= 3.8.5-4), libgomp1 (= 14.1.0-1), libgpg-error0 (= 1.49-2), libgprofng0 (= 2.42-4), libgraphite2-3 (= 1.3.14-2), libgssapi-krb5-2 (= 1.20.1-6+b1), libgtk2.0-0t64 (= 2.24.33-4), libgtk2.0-common (= 2.24.33-4), libharfbuzz0b (= 8.3.0-2+b1), libhdf5-103-1t64 (= 1.10.10+repack-3.3), libhogweed6t64 (= 3.9.1-2.2), libhtml-parser-perl (= 3.82-1+b1), libhtml-tagset-perl (= 3.24-1), libhtml-tree-perl (= 5.07-3), libhtsjdk-java (= 4.1.0+dfsg-2), libhttp-cookies-perl (= 6.11-1), libhttp-date-perl (= 6.06-1), libhttp-message-perl (= 6.46-1), libhttp-negotiate-perl (= 6.01-2), libhwasan0 (= 14.1.0-1), libicu72 (= 72.1-4+b1), libidn2-0 (= 2.3.7-2), libimport-into-perl (= 1.002005-2), libio-html-perl (= 1.004-3), libio-pty-perl (= 1:1.20-1+b2), libio-socket-ssl-perl (= 2.085-1), libipc-run-perl (= 20231003.0-2), libisl23 (= 0.26-3+b2), libitm1 (= 14.1.0-1), libjansson4 (= 2.14-2+b2), libjbig0 (= 2.1-6.1+b1), libjbzip2-java (= 0.9.1-8), libjpeg62-turbo (= 1:2.1.5-3), libk5crypto3 (= 1.20.1-6+b1), libkeyutils1 (= 1.6.3-3), libkrb5-3 (= 1.20.1-6+b1), libkrb5support0 (= 1.20.1-6+b1), libksba8 (= 1.6.6-1), liblcms2-2 (= 2.14-2+b1), libldap-2.5-0 (= 2.5.17+dfsg-1+b1), liblerc4 (= 4.0.0+ds-4+b1), libllvm17t64 (= 1:17.0.6-12), liblsan0 (= 14.1.0-1), liblwp-mediatypes-perl (= 6.04-2), liblwp-protocol-https-perl (= 6.14-1), liblzma5 (= 5.6.1+really5.4.5-1), libmagic-mgc (= 1:5.45-3), libmagic1t64 (= 1:5.45-3), libmbedcrypto7t64 (= 2.28.8-1), libmbedtls14t64 (= 2.28.8-1), libmbedx509-1t64 (= 2.28.8-1), libmd0 (= 1.1.0-2), libmjson-java (= 1.4.0-3), libmodule-runtime-perl (= 0.016-2), libmoo-perl (= 2.005005-1), libmount1 (= 2.40.1-7), libmpc3 (= 1.3.1-1+b2), libmpfr6 (= 4.2.1-1+b1), libncbi-ngs3 (= 3.0.3+dfsg-7+b1), libncbi-vdb3 (= 3.0.2+dfsg-2+b1), libncursesw6 (= 6.5-2), libnet-http-perl (= 6.23-1), libnet-ssleay-perl (= 1.94-1+b2), libnettle8t64 (= 3.9.1-2.2), libnghttp2-14 (= 1.61.0-1+b1), libngs-java (= 3.0.3+dfsg-7+b1), libngs-jni (= 3.0.3+dfsg-7+b1), libnpth0t64 (= 1.6-3.1), libnspr4 (= 2:4.35-1.1+b1), libnss3 (= 2:3.100-1), libp11-kit0 (= 0.25.3-5), libpam-modules (= 1.5.3-7), libpam-modules-bin (= 1.5.3-7), libpam-runtime (= 1.5.3-7), libpam0g (= 1.5.3-7), libpango-1.0-0 (= 1.52.2+ds-1), libpangocairo-1.0-0 (= 1.52.2+ds-1), libpangoft2-1.0-0 (= 1.52.2+ds-1), libparams-classify-perl (= 0.015-2+b4), libpciaccess0 (= 0.17-3+b1), libpcre2-8-0 (= 10.42-4+b1), libpcsclite1 (= 2.2.3-1), libperl5.40 (= 5.40.0~rc1-1), libpipeline1 (= 1.5.7-2), libpixman-1-0 (= 0.42.2-1+b1), libpng16-16t64 (= 1.6.43-5), libpsl5t64 (= 0.21.2-1.1), libpython3-stdlib (= 3.11.8-1), libpython3.11-minimal (= 3.11.9-1), libpython3.11-stdlib (= 3.11.9-1), libquadmath0 (= 14.1.0-1), libreadline8t64 (= 8.2-4), librhino-java (= 1.7.14-2.1), librole-tiny-perl (= 2.002004-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b4), libsasl2-2 (= 2.1.28+dfsg1-6), libsasl2-modules-db (= 2.1.28+dfsg1-6), libseccomp2 (= 2.5.5-1), libselinux1 (= 3.5-2+b2), libsemanage-common (= 3.5-1), libsemanage2 (= 3.5-1+b3), libsensors-config (= 1:3.6.0-10), libsensors5 (= 1:3.6.0-10), libsepol2 (= 3.5-2+b1), libsframe1 (= 2.42-4), libsharpyuv0 (= 1.4.0-0.1), libsis-base-java (= 18.09~pre1+git20180928.45fbd31+dfsg-3), libsis-base-jni (= 18.09~pre1+git20180928.45fbd31+dfsg-3), libsis-jhdf5-java (= 19.04.1+dfsg-4), libsis-jhdf5-jni (= 19.04.1+dfsg-4+b1), libsmartcols1 (= 2.40.1-7), libsnappy-java (= 1.1.10.5-2), libsnappy-jni (= 1.1.10.5-2), libsnappy1v5 (= 1.2.1-1), libsqlite3-0 (= 3.46.0-1), libssh2-1t64 (= 1.11.0-5), libssl3t64 (= 3.2.1-3), libstdc++-13-dev (= 13.2.0-25), libstdc++6 (= 14.1.0-1), libsub-quote-perl (= 2.006008-1), libsystemd0 (= 256~rc3-7), libsz2 (= 1.1.3-1), libtasn1-6 (= 4.19.0-3+b2), libthai-data (= 0.1.29-2), libthai0 (= 0.1.29-2), libtiff6 (= 4.5.1+git230720-4), libtimedate-perl (= 2.3300-2), libtinfo6 (= 6.5-2), libtool (= 2.4.7-7), libtry-tiny-perl (= 0.31-2), libtsan2 (= 14.1.0-1), libubsan1 (= 14.1.0-1), libuchardet0 (= 0.0.8-1+b1), libudev1 (= 256~rc3-7), libunistring5 (= 1.2-1), liburi-perl (= 5.28-1), libuuid1 (= 2.40.1-7), libvulkan1 (= 1.3.283.0-1), libwebp7 (= 1.4.0-0.1), libwww-perl (= 6.77-1), libwww-robotrules-perl (= 6.02-1), libx11-6 (= 2:1.8.7-1+b1), libx11-data (= 2:1.8.7-1), libx11-xcb1 (= 2:1.8.7-1+b1), libxau6 (= 1:1.0.9-1+b1), libxcb-dri2-0 (= 1.17.0-2), libxcb-dri3-0 (= 1.17.0-2), libxcb-glx0 (= 1.17.0-2), libxcb-present0 (= 1.17.0-2), libxcb-randr0 (= 1.17.0-2), libxcb-render0 (= 1.17.0-2), libxcb-shm0 (= 1.17.0-2), libxcb-sync1 (= 1.17.0-2), libxcb-xfixes0 (= 1.17.0-2), libxcb1 (= 1.17.0-2), libxcomposite1 (= 1:0.4.5-1+b1), libxcursor1 (= 1:1.2.2-1), libxdamage1 (= 1:1.1.6-1+b1), libxdmcp6 (= 1:1.1.2-3+b1), libxext6 (= 2:1.3.4-1+b1), libxfixes3 (= 1:6.0.0-2+b1), libxi6 (= 2:1.8.1-1), libxinerama1 (= 2:1.1.4-3+b1), libxml2 (= 2.12.7+dfsg-2), libxrandr2 (= 2:1.5.4-1), libxrender1 (= 1:0.9.10-1.1+b1), libxshmfence1 (= 1.3-1+b1), libxtst6 (= 2:1.2.3-1.1+b1), libxxf86vm1 (= 1:1.1.4-1+b2), libz3-4 (= 4.8.12-3.1+b2), libzstd1 (= 1.5.5+dfsg2-2), linux-libc-dev (= 6.8.12-1), login (= 1:4.13+dfsg1-5), m4 (= 1.4.19-4), make (= 4.3-4.1), man-db (= 2.12.1-1), mawk (= 1.3.4.20240123-1), media-types (= 10.1.0), ncbi-vdb-data (= 3.0.2+dfsg-2), ncurses-base (= 6.5-2), ncurses-bin (= 6.5-2), netbase (= 6.4), openjdk-17-jdk (= 17.0.11+9-1), openjdk-17-jdk-headless (= 17.0.11+9-1), openjdk-17-jre (= 17.0.11+9-1), openjdk-17-jre-headless (= 17.0.11+9-1), openssl (= 3.2.1-3), passwd (= 1:4.13+dfsg1-5), patch (= 2.7.6-7), patchutils (= 0.4.2-1), perl (= 5.40.0~rc1-1), perl-base (= 5.40.0~rc1-1), perl-modules-5.40 (= 5.40.0~rc1-1), perl-openssl-defaults (= 7+b2), pinentry-curses (= 1.2.1-3+b2), po-debconf (= 1.0.21+nmu1), python3 (= 3.11.8-1), python3-minimal (= 3.11.8-1), python3.11 (= 3.11.9-1), python3.11-minimal (= 3.11.9-1), readline-common (= 8.2-4), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.22), shared-mime-info (= 2.4-5), sysvinit-utils (= 3.09-1), tar (= 1.35+dfsg-3), tzdata (= 2024a-4), usr-is-merged (= 39), util-linux (= 2.40.1-7), wdiff (= 1.2.2-6), x11-common (= 1:7.7+23), xz-utils (= 5.6.1+really5.4.5-1), zlib1g (= 1:1.3.dfsg+really1.3.1-1) Environment: DEB_BUILD_OPTIONS="parallel=2" LANG="en_GB.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" LD_LIBRARY_PATH="/usr/lib/libeatmydata" SOURCE_DATE_EPOCH="1686524414" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ fastqc_0.12.1+dfsg-3_all.deb ---------------------------- new Debian package, version 2.0. size 399332 bytes: control archive=2408 bytes. 127 bytes, 3 lines conffiles 1186 bytes, 24 lines control 4015 bytes, 44 lines md5sums Package: fastqc Version: 0.12.1+dfsg-3 Architecture: all Maintainer: Debian Med Packaging Team Installed-Size: 574 Depends: libcommons-math3-java, libjbzip2-java, libhtsjdk-java, libfindbin-libs-perl, libsis-jhdf5-java, default-jre Section: science Priority: optional Homepage: https://www.bioinformatics.babraham.ac.uk/projects/fastqc/ Description: quality control for high throughput sequence data FastQC aims to provide a simple way to do some quality control checks on raw sequence data coming from high throughput sequencing pipelines. It provides a modular set of analyses which you can use to give a quick impression of whether your data has any problems of which you should be aware before doing any further analysis. . The main functions of FastQC are * Import of data from BAM, SAM or FastQ files (any variant) * Providing a quick overview to tell you in which areas there may be problems * Summary graphs and tables to quickly assess your data * Export of results to an HTML based permanent report * Offline operation to allow automated generation of reports without running the interactive application drwxr-xr-x root/root 0 2023-06-11 23:00 ./ drwxr-xr-x root/root 0 2023-06-11 23:00 ./etc/ drwxr-xr-x root/root 0 2023-06-11 23:00 ./etc/fastqc/ drwxr-xr-x root/root 0 2023-03-01 15:17 ./etc/fastqc/Configuration/ -rw-r--r-- root/root 1355 2023-03-01 15:17 ./etc/fastqc/Configuration/adapter_list.txt -rw-r--r-- root/root 13175 2023-03-01 15:17 ./etc/fastqc/Configuration/contaminant_list.txt -rw-r--r-- root/root 2608 2023-03-01 15:17 ./etc/fastqc/Configuration/limits.txt drwxr-xr-x root/root 0 2023-06-11 23:00 ./usr/ drwxr-xr-x root/root 0 2023-06-11 23:00 ./usr/bin/ -rwxr-xr-x root/root 16915 2023-06-11 23:00 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15:17 ./usr/share/fastqc/Help/2 Basic Operations/2.1 Opening a sequence file.html -rw-r--r-- root/root 1195 2023-03-01 15:17 ./usr/share/fastqc/Help/2 Basic Operations/2.2 Evaluating Results.html -rw-r--r-- root/root 1202 2023-03-01 15:17 ./usr/share/fastqc/Help/2 Basic Operations/2.3 Saving a Report.html drwxr-xr-x root/root 0 2023-06-11 23:00 ./usr/share/fastqc/Help/3 Analysis Modules/ -rw-r--r-- root/root 1821 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/1 Basic Statistics.html -rw-r--r-- root/root 3067 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/10 Adapter Content.html -rw-r--r-- root/root 2517 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/11 Kmer Content.html -rw-r--r-- root/root 2264 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/12 Per Tile Sequence Quality.html -rw-r--r-- root/root 3691 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/2 Per Base Sequence Quality.html -rw-r--r-- root/root 1718 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/3 Per Sequence Quality Scores.html -rw-r--r-- root/root 3618 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/4 Per Base Sequence Content.html -rw-r--r-- root/root 1873 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/5 Per Sequence GC Content.html -rw-r--r-- root/root 1884 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/6 Per Base N Content.html -rw-r--r-- root/root 1222 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/7 Sequence Length Distribution.html -rw-r--r-- root/root 5491 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/8 Duplicate Sequences.html -rw-r--r-- root/root 2416 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/9 Overrepresented Sequences.html -rw-r--r-- root/root 20545 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/duplication_levels.png -rw-r--r-- root/root 76372 2023-03-01 15:17 ./usr/share/fastqc/Help/3 Analysis Modules/kmer_profiles.png 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./usr/share/icons/hicolor/ drwxr-xr-x root/root 0 2023-06-11 23:00 ./usr/share/icons/hicolor/32x32/ drwxr-xr-x root/root 0 2023-06-11 23:00 ./usr/share/icons/hicolor/32x32/apps/ -rw-r--r-- root/root 1197 2023-03-01 15:17 ./usr/share/icons/hicolor/32x32/apps/fastqc_icon.png drwxr-xr-x root/root 0 2023-06-11 23:00 ./usr/share/java/ -rw-r--r-- root/root 196337 2023-06-11 23:00 ./usr/share/java/fastqc-0.12.1.jar lrwxrwxrwx root/root 0 2023-06-11 23:00 ./usr/share/java/fastqc.jar -> fastqc-0.12.1.jar drwxr-xr-x root/root 0 2023-06-11 23:00 ./usr/share/man/ drwxr-xr-x root/root 0 2023-06-11 23:00 ./usr/share/man/man1/ -rw-r--r-- root/root 1822 2023-06-11 23:00 ./usr/share/man/man1/fastqc.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: full Build-Space: 4420 Build-Time: 14 Distribution: perl-5.40-throwaway Host Architecture: amd64 Install-Time: 70 Job: /srv/debomatic/incoming/fastqc_0.12.1+dfsg-3.dsc Machine Architecture: amd64 Package: fastqc Package-Time: 95 Source-Version: 0.12.1+dfsg-3 Space: 4420 Status: successful Version: 0.12.1+dfsg-3 -------------------------------------------------------------------------------- Finished at 2024-06-03T05:09:09Z Build needed 00:01:35, 4420k disk space