Format: 1.0
Source: trinityrnaseq
Binary: trinityrnaseq trinityrnaseq-dbgsym trinityrnaseq-examples
Architecture: amd64 source
Version: 2.15.2+dfsg-3
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Build-Origin: Debian
Build-Architecture: amd64
Build-Date: Mon, 21 Sep 2026 20:54:43 +0000
Build-Path: /build/trinityrnaseq-AWN2Nw/trinityrnaseq-2.15.2+dfsg
Build-Tainted-By:
 usr-local-has-programs
Installed-Build-Depends:
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 autoconf (= 2.73-2),
 automake (= 1:1.19-2),
 autopoint (= 1.0-5),
 autotools-dev (= 20240727.1+nmu1),
 base-files (= 14.2),
 base-passwd (= 3.6.8),
 bash (= 5.3-4),
 binfmt-support (= 2.2.2-8),
 binutils (= 2.47-6),
 binutils-common (= 2.47-6),
 binutils-x86-64-linux-gnu (= 2.47-6),
 bsdextrautils (= 2.42.3-1),
 bubblewrap (= 0.12.0-1),
 build-essential (= 12.12),
 bzip2 (= 1.0.8-6+b2),
 ca-certificates (= 20260816),
 ca-certificates-java (= 20260311),
 cmake (= 4.3.4-1),
 comerr-dev (= 2.1-1.47.4-1+b1),
 coreutils (= 9.10-1),
 cpp (= 4:16.1.0-3),
 cpp-13 (= 13.5.0-1),
 cpp-13-x86-64-linux-gnu (= 13.5.0-1),
 cpp-16 (= 16.2.0-3),
 cpp-16-x86-64-linux-gnu (= 16.2.0-3),
 cpp-x86-64-linux-gnu (= 4:16.1.0-3),
 dash (= 0.5.12-12),
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 dbus-bin (= 1.16.2-5+b1),
 dbus-daemon (= 1.16.2-5+b1),
 dbus-session-bus-common (= 1.16.2-5),
 dbus-system-bus-common (= 1.16.2-5),
 dbus-user-session (= 1.16.2-5+b1),
 dconf-gsettings-backend (= 51.0-2),
 dconf-service (= 51.0-2),
 dctrl-tools (= 2.24-3+b1),
 debconf (= 1.5.92),
 debhelper (= 14.5),
 debianutils (= 5.24),
 default-jdk (= 2:1.25-77),
 default-jdk-headless (= 2:1.25-77),
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 default-jre-headless (= 2:1.25-77),
 devscripts (= 2.26.12),
 dh-autoreconf (= 23),
 dh-strip-nondeterminism (= 1.15.1-1),
 diffutils (= 1:3.12-1),
 dpkg (= 1.23.11),
 dpkg-dev (= 1.23.11),
 dwz (= 0.17-1),
 fastjar (= 2:0.98-8),
 file (= 1:5.47-4),
 findutils (= 4.11.0-2),
 fontconfig (= 2.17.1-5),
 fontconfig-config (= 2.17.1-5),
 fonts-dejavu-core (= 2.37-9),
 fonts-dejavu-mono (= 2.37-9),
 g++ (= 4:16.1.0-3),
 g++-16 (= 16.2.0-3),
 g++-16-x86-64-linux-gnu (= 16.2.0-3),
 g++-x86-64-linux-gnu (= 4:16.1.0-3),
 gcc (= 4:16.1.0-3),
 gcc-13 (= 13.5.0-1),
 gcc-13-base (= 13.5.0-1),
 gcc-13-x86-64-linux-gnu (= 13.5.0-1),
 gcc-16 (= 16.2.0-3),
 gcc-16-base (= 16.2.0-3),
 gcc-16-x86-64-linux-gnu (= 16.2.0-3),
 gcc-x86-64-linux-gnu (= 4:16.1.0-3),
 gettext (= 1.0-5),
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 glycin-loaders (= 2.2.1+ds-1),
 glycin-thumbnailers (= 2.2.1+ds-1),
 gpg (= 2.4.9-7+b1),
 gpg-agent (= 2.4.9-7+b1),
 gpgconf (= 2.4.9-7+b1),
 gpgv (= 2.4.9-7+b1),
 grep (= 3.12-1),
 groff-base (= 1.24.1-1),
 gtk-update-icon-cache (= 4.24.0+ds-2),
 gzip (= 1.14-1),
 hicolor-icon-theme (= 0.18-2),
 hostname (= 3.25),
 init-system-helpers (= 1.69+nmu2),
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 jaligner (= 1.0+dfsg-11),
 jarwrapper (= 0.82),
 java-common (= 0.77),
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 krb5-multidev (= 1.22.1-3),
 libacl1 (= 2.4.0-1),
 libapparmor1 (= 4.1.8-2),
 libarchive-zip-perl (= 1.68-1),
 libarchive13t64 (= 3.8.9-1),
 libasan8 (= 16.2.0-3),
 libasound2-data (= 1.2.16.1-1),
 libasound2t64 (= 1.2.16.1-1),
 libassuan9 (= 3.0.2-2+b2),
 libatinject-jsr330-api-java (= 1.0+ds1-6),
 libatk-bridge2.0-0t64 (= 2.62.0-1),
 libatk1.0-0t64 (= 2.62.0-1),
 libatomic1 (= 16.2.0-3),
 libatspi2.0-0t64 (= 2.62.0-1),
 libattr1 (= 1:2.6.0-1),
 libaudit-common (= 1:4.2.1-1),
 libaudit1 (= 1:4.2.1-1),
 libavahi-client3 (= 0.8-18),
 libavahi-common-data (= 0.8-18),
 libavahi-common3 (= 0.8-18),
 libb-hooks-op-check-perl (= 0.22-3+b5),
 libbinutils (= 2.47-6),
 libblkid1 (= 2.42.3-1),
 libbrotli-dev (= 1.2.0-4+b1),
 libbrotli1 (= 1.2.0-4+b1),
 libbsd0 (= 0.12.2-3),
 libbz2-1.0 (= 1.0.8-6+b2),
 libbz2-dev (= 1.0.8-6+b2),
 libc-bin (= 2.43-6),
 libc-dev-bin (= 2.43-6),
 libc-gconv-modules-extra (= 2.43-6),
 libc6 (= 2.43-6),
 libc6-dev (= 2.43-6),
 libcairo-gobject2 (= 1.18.4-3+b1),
 libcairo2 (= 1.18.4-3+b1),
 libcap-ng0 (= 0.9.6-1),
 libcap2 (= 1:2.78-1+b1),
 libcc1-0 (= 16.2.0-3),
 libclass-method-modifiers-perl (= 2.15-1),
 libclass-xsaccessor-perl (= 1.19-4+b7),
 libclone-perl (= 0.50-1+b2),
 libcloudproviders0 (= 0.4.1-1),
 libcolord2 (= 1.4.8-3),
 libcom-err2 (= 1.47.4-1+b1),
 libconfig-inifiles-perl (= 3.003000-1),
 libcrypt1 (= 1:4.5.2+20251210-1),
 libctf-nobfd0 (= 2.47-6),
 libctf0 (= 2.47-6),
 libcups2t64 (= 2.4.18-1),
 libcurl4-gnutls (= 8.22.0-1),
 libcurl4-gnutls-dev (= 8.22.0-1),
 libcurl4t64 (= 8.22.0-1),
 libdatrie1 (= 0.2.14-2),
 libdav1d7 (= 1.5.4-1),
 libdb5.3t64 (= 5.3.28+dfsg2-11+b1),
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 libdebconfclient0 (= 0.283),
 libdebhelper-perl (= 14.5),
 libdeflate-dev (= 1.25-1),
 libdeflate0 (= 1.25-1),
 libdevel-callchecker-perl (= 0.009-3+b1),
 libdpkg-perl (= 1.23.11),
 libdrm-amdgpu1 (= 2.4.134-3),
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 libdrm-intel1 (= 2.4.134-3),
 libdrm2 (= 2.4.134-3),
 libdynaloader-functions-perl (= 0.004-2),
 libedit2 (= 3.1-20260512-1),
 libelf1t64 (= 0.196-1),
 libencode-locale-perl (= 1.05-3),
 libepoxy0 (= 1.5.10-2+b2),
 liberror-prone-java (= 2.18.0-1),
 libevent-2.1-7t64 (= 2.1.13-stable-1),
 libexpat1 (= 2.8.4-1),
 libffi8 (= 3.8.0-2),
 libfile-dirlist-perl (= 0.05-3),
 libfile-homedir-perl (= 1.006-2),
 libfile-listing-perl (= 6.16-1),
 libfile-stripnondeterminism-perl (= 1.15.1-1),
 libfile-touch-perl (= 0.12-2),
 libfile-which-perl (= 1.27-2),
 libfontconfig1 (= 2.17.1-5),
 libfreetype6 (= 2.14.3+dfsg-2),
 libfribidi0 (= 1.0.16-5+b1),
 libgbm1 (= 26.2.3-2),
 libgcc-13-dev (= 13.5.0-1),
 libgcc-16-dev (= 16.2.0-3),
 libgcc-s1 (= 16.2.0-3),
 libgcrypt20 (= 1.12.3-2),
 libgdbm-compat4t64 (= 1.26-1+b2),
 libgdbm6t64 (= 1.26-1+b2),
 libgdk-pixbuf-2.0-0 (= 2.44.8+dfsg-1),
 libgdk-pixbuf2.0-common (= 2.44.8+dfsg-1),
 libgetopt-java (= 1.0.14+dfsg-6),
 libgif7 (= 6.1.3-1),
 libgl1 (= 1.7.0-3+b1),
 libgl1-mesa-dri (= 26.2.3-2),
 libglib2.0-0t64 (= 2.90.0-1),
 libglvnd0 (= 1.7.0-3+b1),
 libglx-mesa0 (= 26.2.3-2),
 libglx0 (= 1.7.0-3+b1),
 libglycin-2-0 (= 2.2.1+ds-1),
 libgmp-dev (= 2:6.3.0+dfsg-5+b2),
 libgmp10 (= 2:6.3.0+dfsg-5+b2),
 libgmpxx4ldbl (= 2:6.3.0+dfsg-5+b2),
 libgnutls-dane0t64 (= 3.8.13-1),
 libgnutls28-dev (= 3.8.13-1),
 libgnutls30t64 (= 3.8.13-1),
 libgomp1 (= 16.2.0-3),
 libgpg-error0 (= 1.61-5),
 libgprofng0 (= 2.47-6),
 libgraphite2-3 (= 1.3.15-2),
 libgssapi-krb5-2 (= 1.22.1-3),
 libgssrpc4t64 (= 1.22.1-3),
 libgtk-3-0t64 (= 3.24.52-1),
 libgtk-3-common (= 3.24.52-1),
 libguava-java (= 32.0.1-1),
 libharfbuzz0b (= 12.3.2-2+b2),
 libheif-plugin-dav1d (= 1.23.4-1+b1),
 libheif-plugin-libde265 (= 1.23.4-1+b1),
 libheif1 (= 1.23.4-1+b1),
 libhogweed6t64 (= 3.10.2-1+b1),
 libhtml-parser-perl (= 3.83-2+b2),
 libhtml-tagset-perl (= 3.24-1),
 libhtml-tree-perl (= 5.07-3),
 libhts-dev (= 1.24-2),
 libhts3t64 (= 1.24-2),
 libhtscodecs2 (= 1.6.7-1),
 libhttp-cookies-perl (= 6.12-2),
 libhttp-date-perl (= 6.08-1),
 libhttp-message-perl (= 7.04-1),
 libhttp-negotiate-perl (= 6.01-2),
 libhwasan0 (= 16.2.0-3),
 libhwy1t64 (= 1.3.0-5.1),
 libidn2-0 (= 2.3.8-5),
 libidn2-dev (= 2.3.8-5),
 libimport-into-perl (= 1.002005-2),
 libio-html-perl (= 1.004-3),
 libio-socket-ssl-perl (= 2.099-1),
 libio-string-perl (= 1.08-4),
 libisl23 (= 0.28-1),
 libitm1 (= 16.2.0-3),
 libjansson4 (= 2.15.1-1),
 libjpeg62-turbo (= 1:3.1.3-4),
 libjs-jquery (= 3.7.1+dfsg+~3.5.33-1),
 libjsoncpp26 (= 1.9.8-2),
 libjsr305-java (= 0.1~+svn49-12),
 libjung-free-java (= 2.1.1-3),
 libjxl0.11 (= 0.11.2-5.1),
 libk5crypto3 (= 1.22.1-3),
 libkadm5clnt-mit12 (= 1.22.1-3),
 libkadm5srv-mit12 (= 1.22.1-3),
 libkdb5-10t64 (= 1.22.1-3),
 libkeyutils1 (= 1.6.3-6+b2),
 libkrb5-3 (= 1.22.1-3),
 libkrb5-dev (= 1.22.1-3),
 libkrb5support0 (= 1.22.1-3),
 libksba8 (= 1.8.1-1),
 liblcms2-2 (= 2.19.1-1),
 libldap-dev (= 2.6.14+dfsg-2),
 libldap2 (= 2.6.14+dfsg-2),
 libllvm22 (= 1:22.1.8-1+b2),
 liblsan0 (= 16.2.0-3),
 liblwp-mediatypes-perl (= 6.04-2),
 liblwp-protocol-https-perl (= 6.15-1),
 liblz4-1 (= 1.10.0-10),
 liblzma-dev (= 5.8.4-1),
 liblzma5 (= 5.8.4-1),
 libmagic-mgc (= 1:5.47-4),
 libmagic1t64 (= 1:5.47-4),
 libmd0 (= 1.2.0-2),
 libmodule-runtime-perl (= 0.018-1),
 libmoo-perl (= 2.005005-1),
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 libmpc3 (= 1.3.1-3),
 libmpfr6 (= 4.2.2-3),
 libncursesw6 (= 6.6+20260608-2),
 libnet-http-perl (= 6.24-1),
 libnet-ssleay-perl (= 1.96-2),
 libnettle8t64 (= 3.10.2-1+b1),
 libnghttp2-14 (= 1.70.0-1),
 libnghttp2-dev (= 1.70.0-1),
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 libnghttp3-dev (= 1.17.0-1),
 libngtcp2-16 (= 1.24.0-1),
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 libngtcp2-dev (= 1.24.0-1),
 libnpth0t64 (= 1.8-4),
 libnspr4 (= 2:4.40-1),
 libnss3 (= 2:3.129-1),
 libp11-kit-dev (= 0.26.5-1),
 libp11-kit0 (= 0.26.5-1),
 libpam-modules (= 1.7.0-8),
 libpam-modules-bin (= 1.7.0-8),
 libpam-runtime (= 1.7.0-8),
 libpam-systemd (= 262~rc3-1),
 libpam0g (= 1.7.0-8),
 libpango-1.0-0 (= 1.58.0-1),
 libpangocairo-1.0-0 (= 1.58.0-1),
 libpangoft2-1.0-0 (= 1.58.0-1),
 libparams-classify-perl (= 0.015-2+b7),
 libpciaccess0 (= 0.19-2),
 libpcre2-8-0 (= 10.48-3),
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 libperl5.42 (= 5.42.3-1),
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 libpng16-16t64 (= 1.6.58-1),
 libproc2-1 (= 2:4.0.7-1),
 libpsl-dev (= 0.23.3-1),
 libpsl5t64 (= 0.23.3-1),
 libpython3-stdlib (= 3.14.7-3),
 libpython3.14-minimal (= 3.14.7-4),
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 libquadmath0 (= 16.2.0-3),
 libreadline8t64 (= 8.3-4),
 librhash1 (= 1.4.6-1.1+b1),
 librole-tiny-perl (= 2.002005-1),
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 librtmp-dev (= 2.6-1),
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 libsasl2-2 (= 2.1.28+dfsg1-11),
 libsasl2-modules-db (= 2.1.28+dfsg1-11),
 libseccomp2 (= 2.6.1-1+b1),
 libselinux1 (= 3.11-2),
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 libsmartcols1 (= 2.42.3-1),
 libsqlite3-0 (= 3.53.4-2),
 libssh2-1-dev (= 1.11.1-6),
 libssh2-1t64 (= 1.11.1-6),
 libssl-dev (= 3.6.4-1),
 libssl3t64 (= 3.6.4-1),
 libstdc++-16-dev (= 16.2.0-3),
 libstdc++6 (= 16.2.0-3),
 libsub-quote-perl (= 2.006009-1),
 libsystemd-shared (= 262~rc3-1),
 libsystemd0 (= 262~rc3-1),
 libtasn1-6 (= 4.21.0-2+b1),
 libtasn1-6-dev (= 4.21.0-2+b1),
 libthai-data (= 0.1.30-3),
 libthai0 (= 0.1.30-3),
 libtimedate-perl (= 2.3500-1),
 libtinfo6 (= 6.6+20260608-2),
 libtool (= 2.6.2-3),
 libtry-tiny-perl (= 0.32-1),
 libtsan2 (= 16.2.0-3),
 libubsan1 (= 16.2.0-3),
 libuchardet0 (= 0.0.8-2+b2),
 libudev1 (= 262~rc3-1),
 libunbound8 (= 1.26.1-1),
 libunistring-dev (= 1.4.2-1),
 libunistring5 (= 1.4.2-1),
 liburi-perl (= 5.37-1),
 libuuid1 (= 2.42.3-1),
 libuv1t64 (= 1.52.1-4),
 libvulkan1 (= 1.4.357.0-1),
 libwayland-client0 (= 1.26.0-1),
 libwayland-cursor0 (= 1.26.0-1),
 libwayland-egl1 (= 1.26.0-1),
 libwww-perl (= 6.83-1),
 libwww-robotrules-perl (= 6.03-1),
 libx11-6 (= 2:1.8.13-1),
 libx11-data (= 2:1.8.13-1),
 libx11-xcb1 (= 2:1.8.13-1),
 libxau6 (= 1:1.0.11-1+b2),
 libxcb-dri3-0 (= 1.17.0-2+b2),
 libxcb-glx0 (= 1.17.0-2+b2),
 libxcb-present0 (= 1.17.0-2+b2),
 libxcb-randr0 (= 1.17.0-2+b2),
 libxcb-render0 (= 1.17.0-2+b2),
 libxcb-shm0 (= 1.17.0-2+b2),
 libxcb-sync1 (= 1.17.0-2+b2),
 libxcb-xfixes0 (= 1.17.0-2+b2),
 libxcb1 (= 1.17.0-2+b2),
 libxcomposite1 (= 1:0.4.6-1+b2),
 libxcursor1 (= 1:1.2.3-1+b2),
 libxdamage1 (= 1:1.1.7-1+b1),
 libxdmcp6 (= 1:1.1.5-2+b1),
 libxext6 (= 2:1.3.4-1+b4),
 libxfixes3 (= 1:6.0.0-2+b5),
 libxi6 (= 2:1.8.3-1),
 libxinerama1 (= 2:1.1.4-3+b5),
 libxkbcommon0 (= 1.13.1-1),
 libxml2-16 (= 2.15.4+dfsg-1),
 libxrandr2 (= 2:1.5.4-1+b4),
 libxrender1 (= 1:0.9.12-1+b2),
 libxres1 (= 2:1.2.1-2),
 libxshmfence1 (= 1.3.3-1+b2),
 libxtst6 (= 2:1.2.5-1+b2),
 libxxf86vm1 (= 1:1.1.4-2+b1),
 libxxhash0 (= 0.8.3-2+b2),
 libyaml-0-2 (= 0.2.5-2+b1),
 libyaml-libyaml-perl (= 0.910.0+ds-1+b1),
 libz3-4 (= 4.13.3-1.1),
 libzstd-dev (= 1.5.7+dfsg-4),
 libzstd1 (= 1.5.7+dfsg-4),
 linux-libc-dev (= 7.2.6-1),
 m4 (= 1.4.21-1),
 make (= 4.4.1-3),
 man-db (= 2.13.1-1),
 mawk (= 1.3.4.20260302-1),
 media-types (= 14.0.0),
 mesa-libgallium (= 26.2.3-2),
 ncurses-base (= 6.6+20260608-2),
 ncurses-bin (= 6.6+20260608-2),
 netbase (= 6.6),
 nettle-dev (= 3.10.2-1+b1),
 openjdk-25-jdk (= 25.0.5~6ea-1),
 openjdk-25-jdk-headless (= 25.0.5~6ea-1),
 openjdk-25-jre (= 25.0.5~6ea-1),
 openjdk-25-jre-headless (= 25.0.5~6ea-1),
 openssl (= 3.6.4-1),
 openssl-provider-legacy (= 3.6.4-1),
 patch (= 2.8-2),
 patchutils (= 0.4.5-1),
 pci.ids (= 0.0~2026.07.21-1),
 perl (= 5.42.3-1),
 perl-base (= 5.42.3-1),
 perl-modules-5.42 (= 5.42.3-1),
 perl-openssl-defaults (= 7+b2),
 pinentry-curses (= 1.3.3-3),
 pkgconf (= 2.5.1-4),
 pkgconf-bin (= 2.5.1-4),
 po-debconf (= 1.0.22),
 procps (= 2:4.0.7-1),
 python3 (= 3.14.7-3),
 python3-minimal (= 3.14.7-3),
 python3.14 (= 3.14.7-4),
 python3.14-minimal (= 3.14.7-4),
 readline-common (= 8.3-4),
 sed (= 4.9-3),
 sensible-utils (= 0.0.26),
 shared-mime-info (= 2.4-5+b3),
 systemd (= 262~rc3-1),
 systemd-sysv (= 262~rc3-1),
 sysvinit-utils (= 3.18-1),
 tar (= 1.35+dfsg-6),
 tzdata (= 2026c-1),
 util-linux (= 2.42.3-1),
 wdiff (= 1.2.2-9),
 x11-common (= 1:7.7+26),
 xkb-data (= 2.48-1),
 xz-utils (= 5.8.4-1),
 zlib1g (= 1:1.3.dfsg+really1.3.2-3),
 zlib1g-dev (= 1:1.3.dfsg+really1.3.2-3)
Environment:
 DEB_BUILD_OPTIONS="parallel=2"
 LANG="C.UTF-8"
 LANGUAGE="en_GB:en"
 LC_COLLATE="C.UTF-8"
 LC_CTYPE="C.UTF-8"
 LD_LIBRARY_PATH="/usr/lib/libeatmydata"
 LD_PRELOAD="libeatmydata.so"
 SOURCE_DATE_EPOCH="1771417500"