sbuild (Debian sbuild) 0.91.10 (27 June 2026) on carme.larted.org.uk +==============================================================================+ | apbs 3.4.1-7 (amd64) Mon, 21 Sep 2026 13:02:58 +0000 | +==============================================================================+ Package: apbs Version: 3.4.1-7 Source Version: 3.4.1-7 Distribution: sid Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: full I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... +------------------------------------------------------------------------------+ | Chroot Setup Commands Mon, 21 Sep 2026 13:02:58 +0000 | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup apbs_3.4.1-7 sid amd64 --------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup apbs_3.4.1-7 sid amd64'. Finished processing commands. -------------------------------------------------------------------------------- I: Setting up apt archive... +------------------------------------------------------------------------------+ | Update chroot Mon, 21 Sep 2026 13:02:59 +0000 | +------------------------------------------------------------------------------+ Hit:1 http://deb.debian.org/debian unstable InRelease Hit:2 http://deb.debian.org/debian sid InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files Mon, 21 Sep 2026 13:03:05 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/debomatic/incoming/apbs_3.4.1-7.dsc exists in /srv/debomatic/incoming; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Mon, 21 Sep 2026 13:03:05 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: dpkg-dev (>= 1.22.5), cmake, debhelper-compat (= 13), dh-python, pybuild-plugin-pyproject, pkgconf, libarpack2-dev, libmaloc-dev, libsuitesparse-dev, libsuperlu-dev, libtirpc-dev, mpi-default-dev, python3, python3-dev, python3-pybind11, python3-setuptools, python3-sphinx | sphinx, swig, zlib1g-dev, build-essential, libjs-mathjax, python3-sphinx-rtd-theme, python3-yaml Filtered Build-Depends: dpkg-dev (>= 1.22.5), cmake, debhelper-compat (= 13), dh-python, pybuild-plugin-pyproject, pkgconf, libarpack2-dev, libmaloc-dev, libsuitesparse-dev, libsuperlu-dev, libtirpc-dev, mpi-default-dev, python3, python3-dev, python3-pybind11, python3-setuptools, python3-sphinx, swig, zlib1g-dev, build-essential, libjs-mathjax, python3-sphinx-rtd-theme, python3-yaml dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/apbs-56d3Iv/resolver-L3MEGw/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/build/apbs-56d3Iv/resolver-L3MEGw/apt_archive ./ InRelease Get:2 copy:/build/apbs-56d3Iv/resolver-L3MEGw/apt_archive ./ Release [609 B] Ign:3 copy:/build/apbs-56d3Iv/resolver-L3MEGw/apt_archive ./ Release.gpg Get:4 copy:/build/apbs-56d3Iv/resolver-L3MEGw/apt_archive ./ Sources [950 B] Get:5 copy:/build/apbs-56d3Iv/resolver-L3MEGw/apt_archive ./ Packages [961 B] Fetched 2520 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils ca-certificates cmake debhelper dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz file fonts-font-awesome fonts-font-awesome-legacy fonts-lato fonts-mathjax fonts-roboto-slab gettext gettext-base gfortran-16 gfortran-16-x86-64-linux-gnu groff-base ibverbs-providers intltool-debian libamd-comgr3 libamd3 libamdhip64-6 libarchive-zip-perl libarchive13t64 libarpack2-dev libarpack2t64 libblas-dev libblas3 libbrotli1 libbtf2 libcamd3 libcbor0.10 libccolamd3 libcholmod5 libclang-common-21-dev libcolamd3 libcom-err2 libcurl4t64 libcxsparse4 libdebhelper-perl libdrm-amdgpu1 libdrm-common libdrm2 libedit2 libelf1t64 libesmtp6 libevent-2.1-7t64 libevent-core-2.1-7t64 libevent-dev libevent-extra-2.1-7t64 libevent-openssl-2.1-7t64 libevent-pthreads-2.1-7t64 libexpat1 libexpat1-dev libfabric1 libfido2-1 libfile-stripnondeterminism-perl libfuse3-4 libgfortran-16-dev libgfortran5 libgssapi-krb5-2 libhsa-runtime64-1 libhwloc-dev libhwloc-plugins libhwloc15 libibmad5 libibumad3 libibverbs-dev libibverbs1 libjs-jquery libjs-jquery-ui libjs-mathjax libjs-sphinxdoc libjson-perl libjsoncpp26 libk5crypto3 libkeyutils1 libklu2 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 libldl3 libllvm21 libltdl-dev libltdl7 libmagic-mgc libmagic1t64 libmaloc-dev libmaloc1 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-ossl0 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi40 libparu1 libpciaccess0 libpipeline1 libpkgconf7 libpmix2t64 libproc2-1 libprrte-bin libprrte-dev libprrte4 libpsl5t64 libpsm2-2 libpython3-dev libpython3-stdlib libpython3.14 libpython3.14-dev libpython3.14-minimal libpython3.14-stdlib librbio4 librdmacm1t64 librhash1 libspex3 libspqr4 libssh2-1t64 libsuitesparse-dev libsuitesparse-mongoose3 libsuitesparseconfig7 libsuperlu-dev libsuperlu7 libsystemd-shared libtirpc-common libtirpc-dev libtirpc3t64 libtool libucc1 libuchardet0 libucx0 libumfpack6 libuv1t64 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2-16 libxnvctrl0 libyaml-0-2 libz3-4 libze1 m4 man-db media-types mpi-default-dev netbase ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client openssh-common openssl pci.ids pkgconf pkgconf-bin po-debconf procps prrte-common pybind11-dev pybuild-plugin-pyproject python-babel-localedata python3 python3-alabaster python3-autocommand python3-babel python3-build python3-certifi python3-chardet python3-charset-normalizer python3-defusedxml python3-dev python3-docutils python3-idna python3-imagesize python3-installer python3-jaraco.context python3-jaraco.functools python3-jinja2 python3-markupsafe python3-minimal python3-more-itertools python3-packaging python3-pybind11 python3-pygments python3-pyproject-hooks python3-requests python3-roman-numerals python3-setuptools python3-snowballstemmer python3-sphinx python3-sphinx-rtd-theme python3-sphinxcontrib.jquery python3-urllib3 python3-wheel python3-yaml python3-zipp python3.14 python3.14-dev python3.14-minimal sensible-utils sgml-base sphinx-common sphinx-rtd-theme-common swig systemd tzdata xml-core zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc cmake-doc cmake-format elpa-cmake-mode ninja-build dh-make flit node-fortawesome-fontawesome-free fonts-roboto gettext-doc libasprintf-dev libgettextpo-dev gnulib-l10n gfortran-16-multilib gfortran-16-doc libcoarrays-dev groff lrzip liblapack-doc fuse3 krb5-doc krb5-user libhwloc-contrib-plugins libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix libjs-mathjax-doc libtool-doc openmpi-doc libsuperlu-doc libapparmor1 libbpf1 libcryptsetup12 libdw1t64 libfdisk1 libkmod2 libmicrohttpd12t64 libpwquality1 libqrencode4 libtss2-esys-3.0.2-0t64 m4-doc apparmor less www-browser opencl-icd gfortran | fortran-compiler keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl pybind11-doc python3-doc python3-tk python3-venv python3-pip python-build-doc python-charset-normalizer-doc docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french texlive-latex-base texlive-latex-recommended python-installer-doc python-jinja2-doc python-pygments-doc ttf-bitstream-vera python3-cryptography python3-openssl python3-socks python-requests-doc python-setuptools-doc python3-stemmer dvipng dvisvgm fonts-freefont-otf imagemagick latexmk node-mathjax-full sphinx-doc tex-gyre texlive-fonts-extra texlive-fonts-recommended texlive-latex-extra texlive-plain-generic python3-brotli python3.14-venv python3.14-doc binfmt-support sgml-base-doc swig-doc swig-examples systemd-container systemd-homed systemd-imds systemd-userdbd systemd-boot systemd-report systemd-resolved systemd-repart polkitd Recommended packages: curl | wget | lynx libclang-rt-21-dev libarchive-cpio-perl javascript-common libjson-xs-perl krb5-locales libcoarrays-openmpi-dev libpmix-dev publicsuffix libgraphblas-dev xauth libmail-sendmail-perl psmisc linux-sysctl-defaults libeigen3-dev libpaper-utils python3-pil python3-numpy default-dbus-system-bus | dbus-system-bus systemd-timesyncd | time-daemon systemd-tpm systemd-cryptsetup libapparmor1 libbpf1 libcryptsetup12 libkmod2 The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils ca-certificates cmake debhelper dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz file fonts-font-awesome fonts-font-awesome-legacy fonts-lato fonts-mathjax fonts-roboto-slab gettext gettext-base gfortran-16 gfortran-16-x86-64-linux-gnu groff-base ibverbs-providers intltool-debian libamd-comgr3 libamd3 libamdhip64-6 libarchive-zip-perl libarchive13t64 libarpack2-dev libarpack2t64 libblas-dev libblas3 libbrotli1 libbtf2 libcamd3 libcbor0.10 libccolamd3 libcholmod5 libclang-common-21-dev libcolamd3 libcom-err2 libcurl4t64 libcxsparse4 libdebhelper-perl libdrm-amdgpu1 libdrm-common libdrm2 libedit2 libelf1t64 libesmtp6 libevent-2.1-7t64 libevent-core-2.1-7t64 libevent-dev libevent-extra-2.1-7t64 libevent-openssl-2.1-7t64 libevent-pthreads-2.1-7t64 libexpat1 libexpat1-dev libfabric1 libfido2-1 libfile-stripnondeterminism-perl libfuse3-4 libgfortran-16-dev libgfortran5 libgssapi-krb5-2 libhsa-runtime64-1 libhwloc-dev libhwloc-plugins libhwloc15 libibmad5 libibumad3 libibverbs-dev libibverbs1 libjs-jquery libjs-jquery-ui libjs-mathjax libjs-sphinxdoc libjson-perl libjsoncpp26 libk5crypto3 libkeyutils1 libklu2 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 libldl3 libllvm21 libltdl-dev libltdl7 libmagic-mgc libmagic1t64 libmaloc-dev libmaloc1 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-ossl0 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi40 libparu1 libpciaccess0 libpipeline1 libpkgconf7 libpmix2t64 libproc2-1 libprrte-bin libprrte-dev libprrte4 libpsl5t64 libpsm2-2 libpython3-dev libpython3-stdlib libpython3.14 libpython3.14-dev libpython3.14-minimal libpython3.14-stdlib librbio4 librdmacm1t64 librhash1 libspex3 libspqr4 libssh2-1t64 libsuitesparse-dev libsuitesparse-mongoose3 libsuitesparseconfig7 libsuperlu-dev libsuperlu7 libsystemd-shared libtirpc-common libtirpc-dev libtirpc3t64 libtool libucc1 libuchardet0 libucx0 libumfpack6 libuv1t64 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2-16 libxnvctrl0 libyaml-0-2 libz3-4 libze1 m4 man-db media-types mpi-default-dev netbase ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client openssh-common openssl pci.ids pkgconf pkgconf-bin po-debconf procps prrte-common pybind11-dev pybuild-plugin-pyproject python-babel-localedata python3 python3-alabaster python3-autocommand python3-babel python3-build python3-certifi python3-chardet python3-charset-normalizer python3-defusedxml python3-dev python3-docutils python3-idna python3-imagesize python3-installer python3-jaraco.context python3-jaraco.functools python3-jinja2 python3-markupsafe python3-minimal python3-more-itertools python3-packaging python3-pybind11 python3-pygments python3-pyproject-hooks python3-requests python3-roman-numerals python3-setuptools python3-snowballstemmer python3-sphinx python3-sphinx-rtd-theme python3-sphinxcontrib.jquery python3-urllib3 python3-wheel python3-yaml python3-zipp python3.14 python3.14-dev python3.14-minimal sbuild-build-depends-main-dummy sensible-utils sgml-base sphinx-common sphinx-rtd-theme-common swig systemd tzdata xml-core zlib1g-dev 0 upgraded, 226 newly installed, 0 to remove and 0 not upgraded. Need to get 198 MB of archives. After this operation, 819 MB of additional disk space will be used. Get:1 copy:/build/apbs-56d3Iv/resolver-L3MEGw/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1012 B] Get:2 http://deb.debian.org/debian unstable/main amd64 libsystemd-shared amd64 262~rc3-1 [2790 kB] Get:3 http://deb.debian.org/debian unstable/main amd64 systemd amd64 262~rc3-1 [3480 kB] Get:4 http://deb.debian.org/debian unstable/main amd64 fonts-lato all 2.015-1 [2780 kB] Get:5 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.8.4-1 [130 kB] Get:6 http://deb.debian.org/debian unstable/main amd64 libpython3.14-minimal amd64 3.14.7-4 [902 kB] Get:7 http://deb.debian.org/debian unstable/main amd64 python3.14-minimal amd64 3.14.7-4 [2713 kB] Get:8 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.14.7-3 [25.3 kB] Get:9 http://deb.debian.org/debian unstable/main amd64 media-types all 14.0.0 [30.8 kB] Get:10 http://deb.debian.org/debian unstable/main amd64 netbase all 6.6 [10.3 kB] Get:11 http://deb.debian.org/debian unstable/main amd64 tzdata all 2026c-1 [260 kB] Get:12 http://deb.debian.org/debian unstable/main amd64 libpython3.14-stdlib amd64 3.14.7-4 [2362 kB] Get:13 http://deb.debian.org/debian unstable/main amd64 python3.14 amd64 3.14.7-4 [861 kB] Get:14 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.14.7-3 [8252 B] Get:15 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.14.7-3 [26.0 kB] Get:16 http://deb.debian.org/debian unstable/main amd64 libproc2-1 amd64 2:4.0.7-1 [73.0 kB] Get:17 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.7-1 [989 kB] Get:18 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get:19 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.6.4-1 [1546 kB] Get:20 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20260816 [134 kB] Get:21 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.47-4 [345 kB] Get:22 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.47-4 [111 kB] Get:23 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.47-4 [43.0 kB] Get:24 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 1.0-5 [334 kB] Get:25 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-2+b2 [69.0 kB] Get:26 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.24.1-1 [1336 kB] Get:27 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.42.3-1 [102 kB] Get:28 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-3 [49.2 kB] Get:29 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get:30 http://deb.debian.org/debian unstable/main amd64 libcbor0.10 amd64 0.10.2-2.2 [29.0 kB] Get:31 http://deb.debian.org/debian unstable/main amd64 libfido2-1 amd64 1.17.0-2 [80.5 kB] Get:32 http://deb.debian.org/debian unstable/main amd64 openssh-common amd64 1:10.5p1-1 [499 kB] Get:33 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20260512-1 [93.6 kB] Get:34 http://deb.debian.org/debian unstable/main amd64 openssh-client amd64 1:10.5p1-1 [734 kB] Get:35 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.21-1 [332 kB] Get:36 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.73-2 [516 kB] Get:37 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20240727.1+nmu1 [60.0 kB] Get:38 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.19-2 [891 kB] Get:39 http://deb.debian.org/debian unstable/main amd64 autopoint all 1.0-5 [820 kB] Get:40 http://deb.debian.org/debian unstable/main amd64 libxml2-16 amd64 2.15.4+dfsg-1 [683 kB] Get:41 http://deb.debian.org/debian unstable/main amd64 libarchive13t64 amd64 3.8.9-1 [364 kB] Get:42 http://deb.debian.org/debian unstable/main amd64 libnghttp3-9 amd64 1.17.0-1 [68.1 kB] Get:43 http://deb.debian.org/debian unstable/main amd64 libngtcp2-16 amd64 1.24.0-1 [145 kB] Get:44 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.2.0-4+b1 [312 kB] Get:45 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.22.1-3 [31.1 kB] Get:46 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.4-1+b1 [19.5 kB] Get:47 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.22.1-3 [79.0 kB] Get:48 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-6+b2 [9348 B] Get:49 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.22.1-3 [335 kB] Get:50 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.22.1-3 [137 kB] Get:51 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.70.0-1 [92.7 kB] Get:52 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-ossl0 amd64 1.24.0-1 [26.5 kB] Get:53 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.23.3-1 [61.7 kB] Get:54 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-6 [253 kB] Get:55 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.22.0-1 [462 kB] Get:56 http://deb.debian.org/debian unstable/main amd64 libjsoncpp26 amd64 1.9.8-2 [87.5 kB] Get:57 http://deb.debian.org/debian unstable/main amd64 librhash1 amd64 1.4.6-1.1+b1 [135 kB] Get:58 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.52.1-4 [158 kB] Get:59 http://deb.debian.org/debian unstable/main amd64 cmake amd64 4.3.4-1 [16.2 MB] Get:60 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 14.5 [77.7 kB] Get:61 http://deb.debian.org/debian unstable/main amd64 libtool all 2.6.2-3 [552 kB] Get:62 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 23 [12.7 kB] Get:63 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:64 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.15.1-1 [17.1 kB] Get:65 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.15.1-1 [6020 B] Get:66 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.196-1 [61.2 kB] Get:67 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.17-1 [109 kB] Get:68 http://deb.debian.org/debian unstable/main amd64 gettext amd64 1.0-5 [2704 kB] Get:69 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:70 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.22 [216 kB] Get:71 http://deb.debian.org/debian unstable/main amd64 debhelper all 14.5 [944 kB] Get:72 http://deb.debian.org/debian unstable/main amd64 dh-python all 7.20260623 [114 kB] Get:73 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31+nmu1 [10.9 kB] Get:74 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.21 [19.0 kB] Get:75 http://deb.debian.org/debian unstable/main amd64 docutils-common all 0.23+dfsg-2 [124 kB] Get:76 http://deb.debian.org/debian unstable/main amd64 fonts-font-awesome-legacy all 6-3 [1547 kB] Get:77 http://deb.debian.org/debian unstable/main amd64 fonts-font-awesome all 7.3.0+dfsg-1 [677 kB] Get:78 http://deb.debian.org/debian unstable/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get:79 http://deb.debian.org/debian unstable/main amd64 fonts-roboto-slab all 2.002+20231012+ds-1 [1159 kB] Get:80 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 16.2.0-3 [879 kB] Get:81 http://deb.debian.org/debian unstable/main amd64 libgfortran-16-dev amd64 16.2.0-3 [921 kB] Get:82 http://deb.debian.org/debian unstable/main amd64 gfortran-16-x86-64-linux-gnu amd64 16.2.0-3 [14.5 MB] Get:83 http://deb.debian.org/debian unstable/main amd64 gfortran-16 amd64 16.2.0-3 [16.5 kB] Get:84 http://deb.debian.org/debian unstable/main amd64 libnl-3-200 amd64 3.12.0-2+b1 [62.2 kB] Get:85 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-200 amd64 3.12.0-2+b1 [200 kB] Get:86 http://deb.debian.org/debian unstable/main amd64 libibverbs1 amd64 65.0-1 [67.9 kB] Get:87 http://deb.debian.org/debian unstable/main amd64 ibverbs-providers amd64 65.0-1 [424 kB] Get:88 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1.1 [8644 kB] Get:89 http://deb.debian.org/debian unstable/main amd64 libllvm21 amd64 1:21.1.8-13 [28.3 MB] Get:90 http://deb.debian.org/debian unstable/main amd64 libclang-common-21-dev amd64 1:21.1.8-13 [769 kB] Get:91 http://deb.debian.org/debian unstable/main amd64 libamd-comgr3 amd64 7.0.2+dfsg-3 [13.9 MB] Get:92 http://deb.debian.org/debian unstable/main amd64 libsuitesparseconfig7 amd64 1:7.14.1+dfsg-1 [32.8 kB] Get:93 http://deb.debian.org/debian unstable/main amd64 libamd3 amd64 1:7.14.1+dfsg-1 [49.9 kB] Get:94 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.134-3 [7860 B] Get:95 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.134-3 [38.5 kB] Get:96 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.134-3 [23.3 kB] Get:97 http://deb.debian.org/debian unstable/main amd64 libnuma1 amd64 2.0.19-1+b2 [22.0 kB] Get:98 http://deb.debian.org/debian unstable/main amd64 libhsa-runtime64-1 amd64 6.4.3+dfsg-5 [678 kB] Get:99 http://deb.debian.org/debian unstable/main amd64 libamdhip64-6 amd64 6.4.3-5 [9385 kB] Get:100 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.1-8 [206 kB] Get:101 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.1-8 [2548 kB] Get:102 http://deb.debian.org/debian unstable/main amd64 libarpack2t64 amd64 3.9.1-6+b2 [105 kB] Get:103 http://deb.debian.org/debian unstable/main amd64 libblas-dev amd64 3.12.1-8 [219 kB] Get:104 http://deb.debian.org/debian unstable/main amd64 liblapack-dev amd64 3.12.1-8 [5230 kB] Get:105 http://deb.debian.org/debian unstable/main amd64 libarpack2-dev amd64 3.9.1-6+b2 [119 kB] Get:106 http://deb.debian.org/debian unstable/main amd64 libbtf2 amd64 1:7.14.1+dfsg-1 [33.7 kB] Get:107 http://deb.debian.org/debian unstable/main amd64 libcamd3 amd64 1:7.14.1+dfsg-1 [46.9 kB] Get:108 http://deb.debian.org/debian unstable/main amd64 libccolamd3 amd64 1:7.14.1+dfsg-1 [49.2 kB] Get:109 http://deb.debian.org/debian unstable/main amd64 libcolamd3 amd64 1:7.14.1+dfsg-1 [41.9 kB] Get:110 http://deb.debian.org/debian unstable/main amd64 libcholmod5 amd64 1:7.14.1+dfsg-1 [713 kB] Get:111 http://deb.debian.org/debian unstable/main amd64 libcxsparse4 amd64 1:7.14.1+dfsg-1 [97.7 kB] Get:112 http://deb.debian.org/debian unstable/main amd64 libesmtp6 amd64 1.1.0-3.2+b2 [59.3 kB] Get:113 http://deb.debian.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.13-stable-1 [183 kB] Get:114 http://deb.debian.org/debian unstable/main amd64 libevent-core-2.1-7t64 amd64 2.1.13-stable-1 [133 kB] Get:115 http://deb.debian.org/debian unstable/main amd64 libevent-extra-2.1-7t64 amd64 2.1.13-stable-1 [108 kB] Get:116 http://deb.debian.org/debian unstable/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.13-stable-1 [53.8 kB] Get:117 http://deb.debian.org/debian unstable/main amd64 libevent-openssl-2.1-7t64 amd64 2.1.13-stable-1 [60.9 kB] Get:118 http://deb.debian.org/debian unstable/main amd64 libevent-dev amd64 2.1.13-stable-1 [307 kB] Get:119 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.8.4-1 [186 kB] Get:120 http://deb.debian.org/debian unstable/main amd64 libpsm2-2 amd64 11.2.185-2.1 [181 kB] Get:121 http://deb.debian.org/debian unstable/main amd64 librdmacm1t64 amd64 65.0-1 [79.0 kB] Get:122 http://deb.debian.org/debian unstable/main amd64 libfabric1 amd64 2.1.0-1.1+b2 [716 kB] Get:123 http://deb.debian.org/debian unstable/main amd64 libfuse3-4 amd64 3.18.3-1 [109 kB] Get:124 http://deb.debian.org/debian unstable/main amd64 libhwloc15 amd64 2.14.0-2 [166 kB] Get:125 http://deb.debian.org/debian unstable/main amd64 libnuma-dev amd64 2.0.19-1+b2 [36.2 kB] Get:126 http://deb.debian.org/debian unstable/main amd64 libltdl7 amd64 2.6.2-3 [427 kB] Get:127 http://deb.debian.org/debian unstable/main amd64 libltdl-dev amd64 2.6.2-3 [171 kB] Get:128 http://deb.debian.org/debian unstable/main amd64 libhwloc-dev amd64 2.14.0-2 [260 kB] Get:129 http://deb.debian.org/debian unstable/main amd64 pci.ids all 0.0~2026.07.21-1 [285 kB] Get:130 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.19-2 [18.5 kB] Get:131 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1+b2 [20.7 kB] Get:132 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-2+b1 [28.2 kB] Get:133 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b2 [144 kB] Get:134 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.13-1 [346 kB] Get:135 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.13-1 [829 kB] Get:136 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b4 [50.7 kB] Get:137 http://deb.debian.org/debian unstable/main amd64 libxnvctrl0 amd64 535.171.04-1+b3 [14.1 kB] Get:138 http://deb.debian.org/debian unstable/main amd64 libze1 amd64 1.32.0-1 [648 kB] Get:139 http://deb.debian.org/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.3.4-1+b1 [42.8 kB] Get:140 http://deb.debian.org/debian unstable/main amd64 libhwloc-plugins amd64 2.14.0-2 [21.7 kB] Get:141 http://deb.debian.org/debian unstable/main amd64 libibumad3 amd64 65.0-1 [29.6 kB] Get:142 http://deb.debian.org/debian unstable/main amd64 libibmad5 amd64 65.0-1 [44.2 kB] Get:143 http://deb.debian.org/debian unstable/main amd64 libnl-3-dev amd64 3.12.0-2+b1 [105 kB] Get:144 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-dev amd64 3.12.0-2+b1 [220 kB] Get:145 http://deb.debian.org/debian unstable/main amd64 libibverbs-dev amd64 65.0-1 [759 kB] Get:146 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1 [319 kB] Get:147 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-ui all 1.14.2+dfsg-1 [245 kB] Get:148 http://deb.debian.org/debian unstable/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get:149 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 9.1.0-8 [46.1 kB] Get:150 http://deb.debian.org/debian unstable/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Get:151 http://deb.debian.org/debian unstable/main amd64 libklu2 amd64 1:7.14.1+dfsg-1 [105 kB] Get:152 http://deb.debian.org/debian unstable/main amd64 libldl3 amd64 1:7.14.1+dfsg-1 [33.7 kB] Get:153 http://deb.debian.org/debian unstable/main amd64 libmaloc1 amd64 1.5-2+b4 [85.0 kB] Get:154 http://deb.debian.org/debian unstable/main amd64 libmaloc-dev amd64 1.5-2+b4 [1271 kB] Get:155 http://deb.debian.org/debian unstable/main amd64 libpmix2t64 amd64 7.0.0~git.20260918-1 [832 kB] Get:156 http://deb.debian.org/debian unstable/main amd64 libucx0 amd64 1.22.0-1 [1064 kB] Get:157 http://deb.debian.org/debian unstable/main amd64 libucc1 amd64 1.9.0-1 [379 kB] Get:158 http://deb.debian.org/debian unstable/main amd64 libopenmpi40 amd64 5.0.11-2 [2106 kB] Get:159 http://deb.debian.org/debian unstable/main amd64 openmpi-common all 5.0.11-2 [31.4 kB] Get:160 http://deb.debian.org/debian unstable/main amd64 libprrte4 amd64 5.0.0~git.20260918.1-2 [711 kB] Get:161 http://deb.debian.org/debian unstable/main amd64 prrte-common all 5.0.0~git.20260918.1-2 [50.2 kB] Get:162 http://deb.debian.org/debian unstable/main amd64 libprrte-dev amd64 5.0.0~git.20260918.1-2 [4258 kB] Get:163 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.2-3 [918 kB] Get:164 http://deb.debian.org/debian unstable/main amd64 libprrte-bin amd64 5.0.0~git.20260918.1-2 [42.4 kB] Get:165 http://deb.debian.org/debian unstable/main amd64 openmpi-bin amd64 5.0.11-2 [182 kB] Get:166 http://deb.debian.org/debian unstable/main amd64 libopenmpi-dev amd64 5.0.11-2 [1023 kB] Get:167 http://deb.debian.org/debian unstable/main amd64 libumfpack6 amd64 1:7.14.1+dfsg-1 [299 kB] Get:168 http://deb.debian.org/debian unstable/main amd64 libparu1 amd64 1:7.14.1+dfsg-1 [76.4 kB] Get:169 http://deb.debian.org/debian unstable/main amd64 libpkgconf7 amd64 2.5.1-4 [47.8 kB] Get:170 http://deb.debian.org/debian unstable/main amd64 libpython3.14 amd64 3.14.7-4 [2528 kB] Get:171 http://deb.debian.org/debian unstable/main amd64 libpython3.14-dev amd64 3.14.7-4 [5819 kB] Get:172 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.14.7-3 [8492 B] Get:173 http://deb.debian.org/debian unstable/main amd64 librbio4 amd64 1:7.14.1+dfsg-1 [49.4 kB] Get:174 http://deb.debian.org/debian unstable/main amd64 libspex3 amd64 1:7.14.1+dfsg-1 [70.5 kB] Get:175 http://deb.debian.org/debian unstable/main amd64 libspqr4 amd64 1:7.14.1+dfsg-1 [160 kB] Get:176 http://deb.debian.org/debian unstable/main amd64 libsuitesparse-mongoose3 amd64 1:7.14.1+dfsg-1 [57.4 kB] Get:177 http://deb.debian.org/debian unstable/main amd64 libsuitesparse-dev amd64 1:7.14.1+dfsg-1 [1593 kB] Get:178 http://deb.debian.org/debian unstable/main amd64 libsuperlu7 amd64 7.0.1+dfsg1-2+b2 [174 kB] Get:179 http://deb.debian.org/debian unstable/main amd64 libsuperlu-dev amd64 7.0.1+dfsg1-2+b2 [21.6 kB] Get:180 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.7+ds-1 [10.0 kB] Get:181 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.7+ds-1 [82.9 kB] Get:182 http://deb.debian.org/debian unstable/main amd64 libtirpc-dev amd64 1.3.7+ds-1 [190 kB] Get:183 http://deb.debian.org/debian unstable/main amd64 libyaml-0-2 amd64 0.2.5-2+b1 [53.8 kB] Get:184 http://deb.debian.org/debian unstable/main amd64 mpi-default-dev amd64 1.20 [3504 B] Get:185 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 2.5.1-4 [35.9 kB] Get:186 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 2.5.1-4 [33.6 kB] Get:187 http://deb.debian.org/debian unstable/main amd64 pybind11-dev all 3.1.0-1 [260 kB] Get:188 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 26.2-2 [84.2 kB] Get:189 http://deb.debian.org/debian unstable/main amd64 python3-pyproject-hooks all 1.2.0-2 [11.7 kB] Get:190 http://deb.debian.org/debian unstable/main amd64 python3-wheel all 0.47.0-1 [26.9 kB] Get:191 http://deb.debian.org/debian unstable/main amd64 python3-build all 1.5.1-1 [85.5 kB] Get:192 http://deb.debian.org/debian unstable/main amd64 python3-installer all 1.0.1+dfsg1-3 [19.7 kB] Get:193 http://deb.debian.org/debian unstable/main amd64 pybuild-plugin-pyproject all 7.20260623 [6996 B] Get:194 http://deb.debian.org/debian unstable/main amd64 python-babel-localedata all 2.18.0+git2026-08-12-2 [6377 kB] Get:195 http://deb.debian.org/debian unstable/main amd64 python3-alabaster all 1.0.0-1 [20.4 kB] Get:196 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-4 [13.7 kB] Get:197 http://deb.debian.org/debian unstable/main amd64 python3-babel all 2.18.0+git2026-08-12-2 [120 kB] Get:198 http://deb.debian.org/debian unstable/main amd64 python3-certifi all 2026.7.22+ds-1 [9928 B] Get:199 http://deb.debian.org/debian unstable/main amd64 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get:200 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.7-2+b1 [190 kB] Get:201 http://deb.debian.org/debian unstable/main amd64 python3-defusedxml all 0.7.1-3 [43.4 kB] Get:202 http://deb.debian.org/debian unstable/main amd64 python3.14-dev amd64 3.14.7-4 [508 kB] Get:203 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.14.7-3 [26.7 kB] Get:204 http://deb.debian.org/debian unstable/main amd64 python3-roman-numerals all 4.1.0-1 [9196 B] Get:205 http://deb.debian.org/debian unstable/main amd64 python3-docutils all 0.23+dfsg-2 [433 kB] Get:206 http://deb.debian.org/debian unstable/main amd64 python3-idna all 3.19-1 [45.2 kB] Get:207 http://deb.debian.org/debian unstable/main amd64 python3-imagesize all 2.0.1-1 [14.9 kB] Get:208 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.1-2 [8184 B] Get:209 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 11.1.0-2 [74.5 kB] Get:210 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get:211 http://deb.debian.org/debian unstable/main amd64 python3-markupsafe amd64 3.0.3-2+b1 [13.7 kB] Get:212 http://deb.debian.org/debian unstable/main amd64 python3-jinja2 all 3.1.6-3 [106 kB] Get:213 http://deb.debian.org/debian unstable/main amd64 python3-pybind11 all 3.1.0-1 [272 kB] Get:214 http://deb.debian.org/debian unstable/main amd64 python3-pygments all 2.20.0+dfsg-2 [850 kB] Get:215 http://deb.debian.org/debian unstable/main amd64 python3-urllib3 all 2.8.0-1 [125 kB] Get:216 http://deb.debian.org/debian unstable/main amd64 python3-requests all 2.34.2-1 [77.6 kB] Get:217 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.23.0-2 [10.2 kB] Get:218 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 84.0.0-2 [560 kB] Get:219 http://deb.debian.org/debian unstable/main amd64 python3-snowballstemmer all 3.1.1-1 [61.9 kB] Get:220 http://deb.debian.org/debian unstable/main amd64 sphinx-common all 9.1.0-8 [700 kB] Get:221 http://deb.debian.org/debian unstable/main amd64 python3-sphinx all 9.1.0-8 [504 kB] Get:222 http://deb.debian.org/debian unstable/main amd64 sphinx-rtd-theme-common all 3.1.0+dfsg-3 [916 kB] Get:223 http://deb.debian.org/debian unstable/main amd64 python3-sphinxcontrib.jquery all 4.1-7 [7652 B] Get:224 http://deb.debian.org/debian unstable/main amd64 python3-sphinx-rtd-theme all 3.1.0+dfsg-3 [28.8 kB] Get:225 http://deb.debian.org/debian unstable/main amd64 python3-yaml amd64 6.0.3-1+b1 [138 kB] Get:226 http://deb.debian.org/debian unstable/main amd64 swig amd64 4.5.1-2 [1597 kB] Preconfiguring packages ... Fetched 198 MB in 1s (167 MB/s) Selecting previously unselected package libsystemd-shared:amd64. (Reading database ... 23390 files and directories currently installed.) Preparing to unpack .../libsystemd-shared_262~rc3-1_amd64.deb ... Unpacking libsystemd-shared:amd64 (262~rc3-1) ... Setting up libsystemd-shared:amd64 (262~rc3-1) ... Selecting previously unselected package systemd. (Reading database ... 23398 files and directories currently installed.) Preparing to unpack .../systemd_262~rc3-1_amd64.deb ... Unpacking systemd (262~rc3-1) ... Selecting previously unselected package fonts-lato. Preparing to unpack .../fonts-lato_2.015-1_all.deb ... Unpacking fonts-lato (2.015-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.8.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.8.4-1) ... Selecting previously unselected package libpython3.14-minimal:amd64. Preparing to unpack .../libpython3.14-minimal_3.14.7-4_amd64.deb ... 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Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up libmaloc1:amd64 (1.5-2+b4) ... Setting up media-types (14.0.0) ... Setting up libpipeline1:amd64 (1.5.8-3) ... Setting up fonts-font-awesome-legacy (6-3) ... Setting up libxau6:amd64 (1:1.0.11-1+b2) ... Setting up libxdmcp6:amd64 (1:1.1.5-2+b1) ... Setting up libkeyutils1:amd64 (1.6.3-6+b2) ... Setting up pci.ids (0.0~2026.07.21-1) ... Setting up libxcb1:amd64 (1.17.0-2+b2) ... Setting up fonts-lato (2.015-1) ... Setting up fonts-mathjax (2.7.9+dfsg-1) ... Setting up swig (4.5.1-2) ... Setting up bsdextrautils (2.42.3-1) ... Setting up libjs-mathjax (2.7.9+dfsg-1) ... Setting up libmagic-mgc (1:5.47-4) ... Setting up libcbor0.10:amd64 (0.10.2-2.2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libyaml-0-2:amd64 (0.2.5-2+b1) ... Setting up libxml2-16:amd64 (2.15.4+dfsg-1) ... Setting up libtirpc-common (1.3.7+ds-1) ... Setting up libdebhelper-perl (14.5) ... Setting up libbrotli1:amd64 (1.2.0-4+b1) ... Setting up libedit2:amd64 (3.1-20260512-1) ... Setting up libpkgconf7:amd64 (2.5.1-4) ... Setting up libuv1t64:amd64 (1.52.1-4) ... Setting up libmagic1t64:amd64 (1:5.47-4) ... Setting up libpsl5t64:amd64 (0.23.3-1) ... Setting up libnghttp2-14:amd64 (1.70.0-1) ... Setting up libibumad3:amd64 (65.0-1) ... Setting up fonts-roboto-slab (2.002+20231012+ds-1) ... Setting up gettext-base (1.0-5) ... Setting up m4 (1.4.21-1) ... Setting up libevent-2.1-7t64:amd64 (2.1.13-stable-1) ... Setting up systemd (262~rc3-1) ... Setting up libesmtp6:amd64 (1.1.0-3.2+b2) ... Setting up libibmad5:amd64 (65.0-1) ... Setting up libcom-err2:amd64 (1.47.4-1+b1) ... Setting up libldl3:amd64 (1:7.14.1+dfsg-1) ... Setting up file (1:5.47-4) ... Setting up libze1:amd64 (1.32.0-1) ... Setting up libelf1t64:amd64 (0.196-1) ... Setting up python-babel-localedata (2.18.0+git2026-08-12-2) ... Setting up libkrb5support0:amd64 (1.22.1-3) ... Setting up tzdata (2026c-1) ... Current default time zone: 'Etc/UTC' Local time is now: Mon Sep 21 13:03:24 UTC 2026. Universal Time is now: Mon Sep 21 13:03:24 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libbtf2:amd64 (1:7.14.1+dfsg-1) ... Setting up autotools-dev (20240727.1+nmu1) ... Setting up libz3-4:amd64 (4.13.3-1.1) ... Setting up libblas3:amd64 (3.12.1-8) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libexpat1-dev:amd64 (2.8.4-1) ... Setting up libproc2-1:amd64 (2:4.0.7-1) ... Setting up libx11-data (2:1.8.13-1) ... Setting up libjsoncpp26:amd64 (1.9.8-2) ... Setting up libllvm21:amd64 (1:21.1.8-13) ... Setting up libhwloc15:amd64 (2.14.0-2) ... Setting up autopoint (1.0-5) ... Setting up pkgconf-bin (2.5.1-4) ... Setting up libk5crypto3:amd64 (1.22.1-3) ... Setting up libltdl7:amd64 (2.6.2-3) ... Setting up libjs-sphinxdoc (9.1.0-8) ... Setting up libgfortran5:amd64 (16.2.0-3) ... Setting up autoconf (2.73-2) ... Setting up libnghttp3-9:amd64 (1.17.0-1) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.2-3) ... Setting up libnuma1:amd64 (2.0.19-1+b2) ... Setting up dwz (0.17-1) ... Setting up sensible-utils (0.0.26) ... Setting up ocl-icd-libopencl1:amd64 (2.3.4-1+b1) ... Setting up libuchardet0:amd64 (0.0.8-2+b2) ... Setting up procps (2:4.0.7-1) ... Setting up libjson-perl (4.10000-1) ... Setting up libnl-3-200:amd64 (3.12.0-2+b1) ... Setting up libpsm2-2 (11.2.185-2.1) ... Setting up openmpi-common (5.0.11-2) ... Setting up libsuitesparseconfig7:amd64 (1:7.14.1+dfsg-1) ... Setting up libx11-6:amd64 (2:1.8.13-1) ... Setting up netbase (6.6) ... Configuration file '/etc/protocols' ==> File on system created locally. ==> File also in package provided by package distributor. ==> Using current old file as requested. Configuration file '/etc/services' ==> File on system created locally. ==> File also in package provided by package distributor. ==> Using current old file as requested. Setting up libngtcp2-16:amd64 (1.24.0-1) ... Setting up sgml-base (1.31+nmu1) ... Setting up librhash1:amd64 (1.4.6-1.1+b1) ... Setting up libkrb5-3:amd64 (1.22.1-3) ... Setting up libevent-core-2.1-7t64:amd64 (2.1.13-stable-1) ... Setting up libclang-common-21-dev:amd64 (1:21.1.8-13) ... Setting up libssh2-1t64:amd64 (1.11.1-6) ... Setting up libjs-jquery (3.7.1+dfsg+~3.5.33-1) ... Setting up libfuse3-4:amd64 (3.18.3-1) ... Setting up libfido2-1:amd64 (1.17.0-2) ... Setting up openssl (3.6.4-1) ... Setting up libdrm-common (2.4.134-3) ... Setting up libarchive13t64:amd64 (3.8.9-1) ... Setting up fonts-font-awesome (7.3.0+dfsg-1) ... Setting up sphinx-rtd-theme-common (3.1.0+dfsg-3) ... Setting up libmaloc-dev (1.5-2+b4) ... Setting up libblas-dev:amd64 (3.12.1-8) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up prrte-common (5.0.0~git.20260918.1-2) ... Setting up automake (1:1.19-2) ... update-alternatives: using /usr/bin/automake-1.19 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.1-1) ... Setting up libpciaccess0:amd64 (0.19-2) ... Setting up liblapack3:amd64 (3.12.1-8) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gettext (1.0-5) ... Setting up libarpack2t64:amd64 (3.9.1-6+b2) ... Setting up libamd3:amd64 (1:7.14.1+dfsg-1) ... Setting up libtool (2.6.2-3) ... Setting up libcolamd3:amd64 (1:7.14.1+dfsg-1) ... Setting up libpython3.14-stdlib:amd64 (3.14.7-4) ... Setting up libspex3:amd64 (1:7.14.1+dfsg-1) ... Setting up libsuitesparse-mongoose3:amd64 (1:7.14.1+dfsg-1) ... Setting up openssh-common (1:10.5p1-1) ... Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.13-stable-1) ... Setting up openssh-client (1:10.5p1-1) ... Created symlink '/etc/systemd/user/sockets.target.wants/ssh-agent.socket' → '/usr/lib/systemd/user/ssh-agent.socket'. Setting up libevent-openssl-2.1-7t64:amd64 (2.1.13-stable-1) ... Setting up libgfortran-16-dev:amd64 (16.2.0-3) ... Setting up libcxsparse4:amd64 (1:7.14.1+dfsg-1) ... Setting up libxext6:amd64 (2:1.3.4-1+b4) ... Setting up libcamd3:amd64 (1:7.14.1+dfsg-1) ... Setting up libsuperlu7:amd64 (7.0.1+dfsg1-2+b2) ... Setting up pkgconf:amd64 (2.5.1-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:amd64 (2.0.19-1+b2) ... Setting up libnl-route-3-200:amd64 (3.12.0-2+b1) ... Setting up libxnvctrl0:amd64 (535.171.04-1+b3) ... Setting up dh-autoreconf (23) ... Setting up libltdl-dev:amd64 (2.6.2-3) ... Setting up ca-certificates (20260816) ... Updating certificates in /etc/ssl/certs... 121 added, 0 removed; done. Setting up libjs-jquery-ui (1.14.2+dfsg-1) ... Setting up librbio4:amd64 (1:7.14.1+dfsg-1) ... Setting up sphinx-common (9.1.0-8) ... Setting up liblapack-dev:amd64 (3.12.1-8) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libgssapi-krb5-2:amd64 (1.22.1-3) ... Setting up gfortran-16-x86-64-linux-gnu (16.2.0-3) ... Setting up libngtcp2-crypto-ossl0:amd64 (1.24.0-1) ... Setting up libevent-extra-2.1-7t64:amd64 (2.1.13-stable-1) ... Setting up libccolamd3:amd64 (1:7.14.1+dfsg-1) ... Setting up dh-strip-nondeterminism (1.15.1-1) ... Setting up libdrm2:amd64 (2.4.134-3) ... Setting up libnl-3-dev:amd64 (3.12.0-2+b1) ... Setting up groff-base (1.24.1-1) ... Setting up gfortran-16 (16.2.0-3) ... Setting up libamd-comgr3:amd64 (7.0.2+dfsg-3) ... Setting up xml-core (0.21) ... Setting up libpython3.14:amd64 (3.14.7-4) ... Setting up libpython3.14-dev:amd64 (3.14.7-4) ... Setting up libhwloc-dev:amd64 (2.14.0-2) ... Setting up python3.14 (3.14.7-4) ... Setting up libsuperlu-dev:amd64 (7.0.1+dfsg1-2+b2) ... Setting up libpython3-stdlib:amd64 (3.14.7-3) ... Setting up libdrm-amdgpu1:amd64 (2.4.134-3) ... Setting up libibverbs1:amd64 (65.0-1) ... Creating group 'rdma' with GID 993. Setting up libcholmod5:amd64 (1:7.14.1+dfsg-1) ... Setting up libarpack2-dev:amd64 (3.9.1-6+b2) ... Setting up libpython3-dev:amd64 (3.14.7-3) ... Setting up libcurl4t64:amd64 (8.22.0-1) ... Setting up python3.14-dev (3.14.7-4) ... Setting up libtirpc3t64:amd64 (1.3.7+ds-1) ... Setting up ibverbs-providers:amd64 (65.0-1) ... Setting up libspqr4:amd64 (1:7.14.1+dfsg-1) ... Setting up po-debconf (1.0.22) ... Setting up python3 (3.14.7-3) ... Setting up python3-zipp (3.23.0-2) ... Setting up python3-autocommand (2.2.2-4) ... Setting up libhwloc-plugins:amd64 (2.14.0-2) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink '/etc/systemd/system/timers.target.wants/man-db.timer' → '/usr/lib/systemd/system/man-db.timer'. Setting up python3-markupsafe (3.0.3-2+b1) ... Setting up pybind11-dev (3.1.0-1) ... Setting up libnl-route-3-dev:amd64 (3.12.0-2+b1) ... Setting up python3-jinja2 (3.1.6-3) ... Setting up python3-pygments (2.20.0+dfsg-2) ... Setting up python3-packaging (26.2-2) ... Setting up libtirpc-dev:amd64 (1.3.7+ds-1) ... Setting up python3-chardet (5.2.0+dfsg-2) ... Setting up python3-pyproject-hooks (1.2.0-2) ... Setting up python3-certifi (2026.7.22+ds-1) ... Setting up python3-snowballstemmer (3.1.1-1) ... Setting up libklu2:amd64 (1:7.14.1+dfsg-1) ... Setting up python3-dev (3.14.7-3) ... Setting up libevent-dev (2.1.13-stable-1) ... Setting up python3-idna (3.19-1) ... Setting up libpmix2t64:amd64 (7.0.0~git.20260918-1) ... Setting up python3-installer (1.0.1+dfsg1-3) ... Setting up python3-urllib3 (2.8.0-1) ... Setting up libumfpack6:amd64 (1:7.14.1+dfsg-1) ... Setting up libhsa-runtime64-1:amd64 (6.4.3+dfsg-5) ... Setting up cmake (4.3.4-1) ... Setting up librdmacm1t64:amd64 (65.0-1) ... Setting up python3-roman-numerals (4.1.0-1) ... Setting up python3-pybind11 (3.1.0-1) ... Setting up python3-imagesize (2.0.1-1) ... Setting up dh-python (7.20260623) ... Setting up python3-more-itertools (11.1.0-2) ... Setting up libfabric1:amd64 (2.1.0-1.1+b2) ... Setting up libprrte4:amd64 (5.0.0~git.20260918.1-2) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.1-2) ... Setting up python3-babel (2.18.0+git2026-08-12-2) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-defusedxml (0.7.1-3) ... Setting up python3-charset-normalizer (3.4.7-2+b1) ... Setting up python3-alabaster (1.0.0-1) ... Setting up python3-yaml (6.0.3-1+b1) ... Setting up debhelper (14.5) ... Setting up libibverbs-dev:amd64 (65.0-1) ... Setting up libparu1:amd64 (1:7.14.1+dfsg-1) ... Setting up python3-wheel (0.47.0-1) ... Setting up libamdhip64-6:amd64 (6.4.3-5) ... Setting up python3-requests (2.34.2-1) ... Setting up python3-build (1.5.1-1) ... Setting up libprrte-dev:amd64 (5.0.0~git.20260918.1-2) ... Setting up libprrte-bin (5.0.0~git.20260918.1-2) ... Setting up libucx0:amd64 (1.22.0-1) ... Setting up python3-setuptools (84.0.0-2) ... Setting up libsuitesparse-dev:amd64 (1:7.14.1+dfsg-1) ... Setting up pybuild-plugin-pyproject (7.20260623) ... Setting up libucc1:amd64 (1.9.0-1) ... Setting up libopenmpi40:amd64 (5.0.11-2) ... Setting up openmpi-bin (5.0.11-2) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libopenmpi-dev (5.0.11-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up mpi-default-dev (1.20) ... Processing triggers for libc-bin (2.43-6) ... Processing triggers for sgml-base (1.31+nmu1) ... Setting up docutils-common (0.23+dfsg-2) ... Processing triggers for sgml-base (1.31+nmu1) ... Setting up python3-docutils (0.23+dfsg-2) ... Setting up python3-sphinx (9.1.0-8) ... Setting up python3-sphinxcontrib.jquery (4.1-7) ... Setting up python3-sphinx-rtd-theme (3.1.0+dfsg-3) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for ca-certificates (20260816) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. +------------------------------------------------------------------------------+ | Check architectures Mon, 21 Sep 2026 13:03:37 +0000 | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Build environment Mon, 21 Sep 2026 13:03:37 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 7.0.10+deb14-amd64 #1 SMP PREEMPT_DYNAMIC Debian 7.0.10-1 (2026-05-27) amd64 (x86_64) Toolchain package versions: binutils_2.47-6 dpkg-dev_1.23.11 g++-13_13.5.0-1 g++-16_16.2.0-3 gcc-13_13.5.0-1 gcc-16_16.2.0-3 libc6-dev_2.43-6 libstdc++-13-dev_13.5.0-1 libstdc++-16-dev_16.2.0-3 libstdc++6_16.2.0-3 linux-libc-dev_7.2.6-1 Package versions: adduser_3.159 apt_3.3.3 autoconf_2.73-2 automake_1:1.19-2 autopoint_1.0-5 autotools-dev_20240727.1+nmu1 base-files_14.2 base-passwd_3.6.8 bash_5.3-4 binutils_2.47-6 binutils-common_2.47-6 binutils-x86-64-linux-gnu_2.47-6 bsdextrautils_2.42.3-1 bsdutils_1:2.42.3-1 build-essential_12.12 bzip2_1.0.8-6+b2 ca-certificates_20260816 cmake_4.3.4-1 coreutils_9.10-1 cpp_4:16.1.0-3 cpp-13_13.5.0-1 cpp-13-x86-64-linux-gnu_13.5.0-1 cpp-16_16.2.0-3 cpp-16-x86-64-linux-gnu_16.2.0-3 cpp-x86-64-linux-gnu_4:16.1.0-3 dash_0.5.12-12 debconf_1.5.92 debhelper_14.5 debian-archive-keyring_2025.1 debianutils_5.24 dh-autoreconf_23 dh-python_7.20260623 dh-strip-nondeterminism_1.15.1-1 diffutils_1:3.12-1 dirmngr_2.4.9-7+b1 docutils-common_0.23+dfsg-2 dpkg_1.23.11 dpkg-dev_1.23.11 dwz_0.17-1 eatmydata_131-2 file_1:5.47-4 findutils_4.11.0-2 fonts-font-awesome_7.3.0+dfsg-1 fonts-font-awesome-legacy_6-3 fonts-lato_2.015-1 fonts-mathjax_2.7.9+dfsg-1 fonts-roboto-slab_2.002+20231012+ds-1 g++_4:16.1.0-3 g++-13_13.5.0-1 g++-13-x86-64-linux-gnu_13.5.0-1 g++-16_16.2.0-3 g++-16-x86-64-linux-gnu_16.2.0-3 g++-x86-64-linux-gnu_4:16.1.0-3 gcc_4:16.1.0-3 gcc-13_13.5.0-1 gcc-13-base_13.5.0-1 gcc-13-x86-64-linux-gnu_13.5.0-1 gcc-14-base_14.4.0-2 gcc-16_16.2.0-3 gcc-16-base_16.2.0-3 gcc-16-x86-64-linux-gnu_16.2.0-3 gcc-x86-64-linux-gnu_4:16.1.0-3 gettext_1.0-5 gettext-base_1.0-5 gfortran-16_16.2.0-3 gfortran-16-x86-64-linux-gnu_16.2.0-3 gnupg_2.4.9-7 gnupg-l10n_2.4.9-7 gnupg-utils_2.4.9-7+b1 gpg_2.4.9-7+b1 gpg-agent_2.4.9-7+b1 gpg-wks-client_2.4.9-7+b1 gpgconf_2.4.9-7+b1 gpgsm_2.4.9-7+b1 gpgv_2.4.9-7+b1 grep_3.12-1 groff-base_1.24.1-1 gzip_1.14-1 hostname_3.25 ibverbs-providers_65.0-1 init-system-helpers_1.69+nmu2 intltool-debian_0.35.0+20060710.6 libacl1_2.4.0-1 libamd-comgr3_7.0.2+dfsg-3 libamd3_1:7.14.1+dfsg-1 libamdhip64-6_6.4.3-5 libapt-pkg6.0t64_2.9.29 libapt-pkg7.0_3.3.3 libarchive-zip-perl_1.68-1 libarchive13t64_3.8.9-1 libarpack2-dev_3.9.1-6+b2 libarpack2t64_3.9.1-6+b2 libasan8_16.2.0-3 libassuan0_2.5.6-1+b1 libassuan9_3.0.2-2+b2 libatomic1_16.2.0-3 libattr1_1:2.6.0-1 libaudit-common_1:4.2.1-1 libaudit1_1:4.2.1-1 libbinutils_2.47-6 libblas-dev_3.12.1-8 libblas3_3.12.1-8 libblkid1_2.42.3-1 libbrotli1_1.2.0-4+b1 libbsd0_0.12.2-3 libbtf2_1:7.14.1+dfsg-1 libbz2-1.0_1.0.8-6+b2 libc-bin_2.43-6 libc-dev-bin_2.43-6 libc-gconv-modules-extra_2.43-6 libc-l10n_2.43-6 libc6_2.43-6 libc6-dev_2.43-6 libcamd3_1:7.14.1+dfsg-1 libcap-ng0_0.9.6-1 libcap2_1:2.78-1+b1 libcbor0.10_0.10.2-2.2 libcc1-0_16.2.0-3 libccolamd3_1:7.14.1+dfsg-1 libcholmod5_1:7.14.1+dfsg-1 libclang-common-21-dev_1:21.1.8-13 libcolamd3_1:7.14.1+dfsg-1 libcom-err2_1.47.4-1+b1 libcrypt1_1:4.5.2+20251210-1 libctf-nobfd0_2.47-6 libctf0_2.47-6 libcurl4t64_8.22.0-1 libcxsparse4_1:7.14.1+dfsg-1 libdb5.3t64_5.3.28+dfsg2-11+b1 libdebconfclient0_0.283 libdebhelper-perl_14.5 libdpkg-perl_1.23.11 libdrm-amdgpu1_2.4.134-3 libdrm-common_2.4.134-3 libdrm2_2.4.134-3 libeatmydata1_131-2+b2 libedit2_3.1-20260512-1 libelf1t64_0.196-1 libesmtp6_1.1.0-3.2+b2 libevent-2.1-7t64_2.1.13-stable-1 libevent-core-2.1-7t64_2.1.13-stable-1 libevent-dev_2.1.13-stable-1 libevent-extra-2.1-7t64_2.1.13-stable-1 libevent-openssl-2.1-7t64_2.1.13-stable-1 libevent-pthreads-2.1-7t64_2.1.13-stable-1 libexpat1_2.8.4-1 libexpat1-dev_2.8.4-1 libfabric1_2.1.0-1.1+b2 libffi8_3.8.0-2 libfido2-1_1.17.0-2 libfile-stripnondeterminism-perl_1.15.1-1 libfuse3-4_3.18.3-1 libgcc-13-dev_13.5.0-1 libgcc-16-dev_16.2.0-3 libgcc-s1_16.2.0-3 libgcrypt20_1.12.3-2 libgdbm-compat4t64_1.26-1+b2 libgdbm6t64_1.26-1+b2 libgfortran-16-dev_16.2.0-3 libgfortran5_16.2.0-3 libgmp10_2:6.3.0+dfsg-5+b2 libgnutls30t64_3.8.13-1 libgomp1_16.2.0-3 libgpg-error0_1.61-5 libgprofng0_2.47-6 libgssapi-krb5-2_1.22.1-3 libhogweed6t64_3.10.2-1+b1 libhsa-runtime64-1_6.4.3+dfsg-5 libhwasan0_16.2.0-3 libhwloc-dev_2.14.0-2 libhwloc-plugins_2.14.0-2 libhwloc15_2.14.0-2 libibmad5_65.0-1 libibumad3_65.0-1 libibverbs-dev_65.0-1 libibverbs1_65.0-1 libidn2-0_2.3.8-5 libisl23_0.28-1 libitm1_16.2.0-3 libjansson4_2.15.1-1 libjs-jquery_3.7.1+dfsg+~3.5.33-1 libjs-jquery-ui_1.14.2+dfsg-1 libjs-mathjax_2.7.9+dfsg-1 libjs-sphinxdoc_9.1.0-8 libjson-perl_4.10000-1 libjsoncpp26_1.9.8-2 libk5crypto3_1.22.1-3 libkeyutils1_1.6.3-6+b2 libklu2_1:7.14.1+dfsg-1 libkrb5-3_1.22.1-3 libkrb5support0_1.22.1-3 libksba8_1.8.1-1 liblapack-dev_3.12.1-8 liblapack3_3.12.1-8 libldap-2.5-0_2.5.19+dfsg-1 libldap2_2.6.14+dfsg-2 libldl3_1:7.14.1+dfsg-1 libllvm21_1:21.1.8-13 liblsan0_16.2.0-3 libltdl-dev_2.6.2-3 libltdl7_2.6.2-3 liblz4-1_1.10.0-10 liblzma5_5.8.4-1 libmagic-mgc_1:5.47-4 libmagic1t64_1:5.47-4 libmaloc-dev_1.5-2+b4 libmaloc1_1.5-2+b4 libmd0_1.2.0-2 libmount1_2.42.3-1 libmpc3_1.3.1-3 libmpfr6_4.2.2-3 libncursesw6_6.6+20260608-2 libnettle8t64_3.10.2-1+b1 libnghttp2-14_1.70.0-1 libnghttp3-9_1.17.0-1 libngtcp2-16_1.24.0-1 libngtcp2-crypto-ossl0_1.24.0-1 libnl-3-200_3.12.0-2+b1 libnl-3-dev_3.12.0-2+b1 libnl-route-3-200_3.12.0-2+b1 libnl-route-3-dev_3.12.0-2+b1 libnpth0t64_1.8-4 libnuma-dev_2.0.19-1+b2 libnuma1_2.0.19-1+b2 libopenmpi-dev_5.0.11-2 libopenmpi40_5.0.11-2 libp11-kit0_0.26.5-1 libpam-modules_1.7.0-8 libpam-modules-bin_1.7.0-8 libpam-runtime_1.7.0-8 libpam0g_1.7.0-8 libparu1_1:7.14.1+dfsg-1 libpciaccess0_0.19-2 libpcre2-8-0_10.48-3 libperl5.38t64_5.38.2-5 libperl5.42_5.42.3-1 libpipeline1_1.5.8-3 libpkgconf7_2.5.1-4 libpmix2t64_7.0.0~git.20260918-1 libproc2-1_2:4.0.7-1 libprrte-bin_5.0.0~git.20260918.1-2 libprrte-dev_5.0.0~git.20260918.1-2 libprrte4_5.0.0~git.20260918.1-2 libpsl5t64_0.23.3-1 libpsm2-2_11.2.185-2.1 libpython3-dev_3.14.7-3 libpython3-stdlib_3.14.7-3 libpython3.14_3.14.7-4 libpython3.14-dev_3.14.7-4 libpython3.14-minimal_3.14.7-4 libpython3.14-stdlib_3.14.7-4 libquadmath0_16.2.0-3 librbio4_1:7.14.1+dfsg-1 librdmacm1t64_65.0-1 libreadline8t64_8.3-4 librhash1_1.4.6-1.1+b1 libsasl2-2_2.1.28+dfsg1-11 libsasl2-modules-db_2.1.28+dfsg1-11 libseccomp2_2.6.1-1+b1 libselinux1_3.11-2 libsemanage-common_3.11-1 libsemanage2_3.11-1+b1 libsepol2_3.11-1 libsframe1_2.44-3 libsframe3_2.47-6 libsmartcols1_2.42.3-1 libspex3_1:7.14.1+dfsg-1 libspqr4_1:7.14.1+dfsg-1 libsqlite3-0_3.53.4-2 libssh2-1t64_1.11.1-6 libssl3t64_3.6.4-1 libstdc++-13-dev_13.5.0-1 libstdc++-16-dev_16.2.0-3 libstdc++6_16.2.0-3 libsuitesparse-dev_1:7.14.1+dfsg-1 libsuitesparse-mongoose3_1:7.14.1+dfsg-1 libsuitesparseconfig7_1:7.14.1+dfsg-1 libsuperlu-dev_7.0.1+dfsg1-2+b2 libsuperlu7_7.0.1+dfsg1-2+b2 libsystemd-shared_262~rc3-1 libsystemd0_262~rc3-1 libtasn1-6_4.21.0-2+b1 libtinfo6_6.6+20260608-2 libtirpc-common_1.3.7+ds-1 libtirpc-dev_1.3.7+ds-1 libtirpc3t64_1.3.7+ds-1 libtool_2.6.2-3 libtsan2_16.2.0-3 libtss2-mu-4.0.1-0t64_4.1.3-7 libtss2-rc0t64_4.1.3-7 libtss2-sys1t64_4.1.3-7 libtss2-tcti-device0t64_4.1.3-7 libtss2-tcti-mssim0t64_4.1.3-7 libtss2-tcti-swtpm0t64_4.1.3-7 libubsan1_16.2.0-3 libucc1_1.9.0-1 libuchardet0_0.0.8-2+b2 libucx0_1.22.0-1 libudev1_262~rc3-1 libumfpack6_1:7.14.1+dfsg-1 libunistring5_1.4.2-1 libuuid1_2.42.3-1 libuv1t64_1.52.1-4 libx11-6_2:1.8.13-1 libx11-data_2:1.8.13-1 libxau6_1:1.0.11-1+b2 libxcb1_1.17.0-2+b2 libxdmcp6_1:1.1.5-2+b1 libxext6_2:1.3.4-1+b4 libxml2-16_2.15.4+dfsg-1 libxnvctrl0_535.171.04-1+b3 libxxhash0_0.8.3-2+b2 libyaml-0-2_0.2.5-2+b1 libz3-4_4.13.3-1.1 libze1_1.32.0-1 libzstd1_1.5.7+dfsg-4 linux-libc-dev_7.2.6-1 locales-all_2.43-6 login_1:4.16.0-2+really2.42.3-1 login.defs_1:4.19.3-2 m4_1.4.21-1 make_4.4.1-3 man-db_2.13.1-1 mawk_1.3.4.20260302-1 media-types_14.0.0 mount_2.42.3-1 mpi-default-dev_1.20 ncurses-base_6.6+20260608-2 ncurses-bin_6.6+20260608-2 netbase_6.6 ocl-icd-libopencl1_2.3.4-1+b1 openmpi-bin_5.0.11-2 openmpi-common_5.0.11-2 openssh-client_1:10.5p1-1 openssh-common_1:10.5p1-1 openssl_3.6.4-1 openssl-provider-legacy_3.6.4-1 passwd_1:4.19.3-2 patch_2.8-2 pci.ids_0.0~2026.07.21-1 perl_5.42.3-1 perl-base_5.42.3-1 perl-modules-5.38_5.38.2-5 perl-modules-5.42_5.42.3-1 pinentry-curses_1.3.3-3 pkgconf_2.5.1-4 pkgconf-bin_2.5.1-4 po-debconf_1.0.22 procps_2:4.0.7-1 prrte-common_5.0.0~git.20260918.1-2 pybind11-dev_3.1.0-1 pybuild-plugin-pyproject_7.20260623 python-babel-localedata_2.18.0+git2026-08-12-2 python3_3.14.7-3 python3-alabaster_1.0.0-1 python3-autocommand_2.2.2-4 python3-babel_2.18.0+git2026-08-12-2 python3-build_1.5.1-1 python3-certifi_2026.7.22+ds-1 python3-chardet_5.2.0+dfsg-2 python3-charset-normalizer_3.4.7-2+b1 python3-defusedxml_0.7.1-3 python3-dev_3.14.7-3 python3-docutils_0.23+dfsg-2 python3-idna_3.19-1 python3-imagesize_2.0.1-1 python3-installer_1.0.1+dfsg1-3 python3-jaraco.context_6.0.1-2 python3-jaraco.functools_4.1.0-1 python3-jinja2_3.1.6-3 python3-markupsafe_3.0.3-2+b1 python3-minimal_3.14.7-3 python3-more-itertools_11.1.0-2 python3-packaging_26.2-2 python3-pybind11_3.1.0-1 python3-pygments_2.20.0+dfsg-2 python3-pyproject-hooks_1.2.0-2 python3-requests_2.34.2-1 python3-roman-numerals_4.1.0-1 python3-setuptools_84.0.0-2 python3-snowballstemmer_3.1.1-1 python3-sphinx_9.1.0-8 python3-sphinx-rtd-theme_3.1.0+dfsg-3 python3-sphinxcontrib.jquery_4.1-7 python3-urllib3_2.8.0-1 python3-wheel_0.47.0-1 python3-yaml_6.0.3-1+b1 python3-zipp_3.23.0-2 python3.14_3.14.7-4 python3.14-dev_3.14.7-4 python3.14-minimal_3.14.7-4 readline-common_8.3-4 rpcsvc-proto_1.4.4-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-3 sensible-utils_0.0.26 sgml-base_1.31+nmu1 sphinx-common_9.1.0-8 sphinx-rtd-theme-common_3.1.0+dfsg-3 sqv_1.5.0-1 swig_4.5.1-2 systemd_262~rc3-1 sysvinit-utils_3.18-1 tar_1.35+dfsg-6 tzdata_2026c-1 usr-is-merged_39+nmu2 util-linux_2.42.3-1 xml-core_0.21 xz-utils_5.8.4-1 zlib1g_1:1.3.dfsg+really1.3.2-3 zlib1g-dev_1:1.3.dfsg+really1.3.2-3 +------------------------------------------------------------------------------+ | Build Mon, 21 Sep 2026 13:03:37 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: apbs Binary: apbs, python3-apbslib, libapbs-dev, libapbs3t64, apbs-data, apbs-doc, libfetk-dev, libfetk1.9t64 Architecture: any all Version: 3.4.1-7 Maintainer: Debichem Team Uploaders: Michael Banck Homepage: http://www.poissonboltzmann.org/ Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/debichem-team/apbs Vcs-Git: https://salsa.debian.org/debichem-team/apbs.git Testsuite: autopkgtest Testsuite-Triggers: python3 Build-Depends: dpkg-dev (>= 1.22.5), cmake, debhelper-compat (= 13), dh-python, pybuild-plugin-pyproject, pkgconf, libarpack2-dev, libmaloc-dev, libsuitesparse-dev, libsuperlu-dev, libtirpc-dev, mpi-default-dev, python3, python3-dev, python3-pybind11, python3-setuptools, python3-sphinx | sphinx, swig, zlib1g-dev Build-Depends-Indep: libjs-mathjax, python3-sphinx-rtd-theme, python3-yaml Package-List: apbs deb science optional arch=any apbs-data deb science optional arch=all apbs-doc deb science optional arch=all libapbs-dev deb libdevel optional arch=any libapbs3t64 deb libs optional arch=any libfetk-dev deb libdevel optional arch=any libfetk1.9t64 deb libs optional arch=any python3-apbslib deb python optional arch=any Checksums-Sha1: 584fd36dc1424cb22fd8846f1cf2c7ead60ce0c6 85806314 apbs_3.4.1.orig.tar.gz c80f4450c2b89c077c09775422446dc12ecbce5d 20421920 apbs_3.4.1-7.debian.tar.xz Checksums-Sha256: 644e6246fd37c9dd4172fc7be1763337082ab8584dbcd53e738c831b62c89bb2 85806314 apbs_3.4.1.orig.tar.gz 07f5ff27a501fa7fb2977c39b106f8fa39cd3b6a90e4126dd6db6fee6af54d1e 20421920 apbs_3.4.1-7.debian.tar.xz Files: 5d2af7c3592f8c410a5df39887361520 85806314 apbs_3.4.1.orig.tar.gz a36b1f810e0f9ace0049e98c801e8025 20421920 apbs_3.4.1-7.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQEzBAEBCgAdFiEE1Uw7+v+wQt44LaXXQc5/C58bizIFAmjQGxgACgkQQc5/C58b izKGhwf9HR4Tu/vZrvvkXQnRLtw7ym0qIF7qi0isKuX5QbOc5bVZs8pdUPaIyCXS jmsyyoyYbJeKZGm5n+Wukzo7ws11v8uGQmoOwRbctCd/ChIluUWVtXEa6i54wcxG lCwhsOdFhwvZnijq8lNi/1QEsYLfnbSSOVZpcCBMHVOtvxPP3xfDLMw9qFNgwv7+ upJZ9a9hmhMKUCEQKRmUxjqrzf61ljmaOEOSan3XSRdRGO2aVC5DzHrunJC5mzMs Wfbj+GG/NZBfRKjCx4q27J4bJ2t6v1094ZsNZhL4xqcWYCb3ahjAIq7EI3mNlWrP va+2egzYatG1Xv1I9PLks2RkFFP01g== =m7dm -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./apbs_3.4.1-7.dsc: missing OpenPGP keyrings dpkg-source: info: verifying ./apbs_3.4.1-7.dsc dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-keyring.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-tag2upload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-nonupload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting apbs in /build/apbs-56d3Iv/apbs-3.4.1 dpkg-source: info: unpacking apbs_3.4.1.orig.tar.gz dpkg-source: info: unpacking apbs_3.4.1-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying wrong-path-for-interpreter.patch dpkg-source: info: applying debian_testfiles.patch dpkg-source: info: applying fix_spelling_errors.patch dpkg-source: info: applying shared_library_soname.patch dpkg-source: info: applying python3.patch dpkg-source: info: applying cmake.patch dpkg-source: info: applying docs.patch dpkg-source: info: applying open-U-obsolete.patch dpkg-source: info: applying gcc14.patch clean up apt cache ------------------ Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Time Build Commands Mon, 21 Sep 2026 13:03:40 +0000 | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/starting-build-commands/no-network apbs_3.4.1-7 sid amd64 --------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/starting-build-commands/no-network apbs_3.4.1-7 sid amd64'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANGUAGE=en_GB:en LC_ALL=C.UTF-8 LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so LOGNAME=debomatic PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/build/apbs-56d3Iv/apbs-3.4.1 SCHROOT_ALIAS_NAME=sid-amd64-debomatic SCHROOT_CHROOT_NAME=sid-amd64-debomatic SCHROOT_COMMAND=env SCHROOT_GID=110 SCHROOT_GROUP=sbuild SCHROOT_SESSION_ID=sid-amd64-debomatic-4ab984e8-ebc8-44c5-9fdc-0cd00f744ce2 SCHROOT_UID=1002 SCHROOT_USER=debomatic SHELL=/bin/sh USER=debomatic dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -Zxz dpkg-buildpackage: info: source package apbs dpkg-buildpackage: info: source version 3.4.1-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Santiago Vila dpkg-source -Zxz --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3,sphinxdoc --buildsystem=cmake dh_auto_clean -O--buildsystem=cmake dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake dpkg-source -Zxz -b . dpkg-source: info: using source format '3.0 (quilt)' dpkg-source: info: building apbs using existing ../apbs_3.4.1.orig.tar.gz dpkg-source: info: using patch list from debian/patches/series dpkg-source: warning: ignoring deletion of file examples/hca-bind/UHBD/bindf.out.orig, use --include-removal to override dpkg-source: info: building apbs in ../apbs_3.4.1-7.debian.tar.xz dpkg-source: info: building apbs in ../apbs_3.4.1-7.dsc debian/rules binary dh binary --with python3,sphinxdoc --buildsystem=cmake dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1' dh_auto_configure -- \ -DCMAKE_BUILD_TYPE=None \ -DAPBS_STATIC_BUILD=Off \ -DBUILD_DOC=Off -DBUILD_TOOLS=On \ -DENABLE_OPENMP=On -DENABLE_MPI=On \ -DENABLE_PYTHON=On -DBUILD_SHARED_LIBS=On \ -DENABLE_READLINE=Off -DENABLE_ZLIB=On \ -DFETCHCONTENT_SOURCE_DIR_FETK=/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk \ -DRPC_CFLAGS=-I/usr/include/tirpc \ -DBUILD_MALOC=Off cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=x86_64-linux-gnu-pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_C_COMPILER=/usr/bin/x86_64-linux-gnu-gcc -DCMAKE_CXX_COMPILER=/usr/bin/x86_64-linux-gnu-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/x86_64-linux-gnu-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/x86_64-linux-gnu-pkg-config -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_BUILD_TYPE=None -DAPBS_STATIC_BUILD=Off -DBUILD_DOC=Off -DBUILD_TOOLS=On -DENABLE_OPENMP=On -DENABLE_MPI=On -DENABLE_PYTHON=On -DBUILD_SHARED_LIBS=On -DENABLE_READLINE=Off -DENABLE_ZLIB=On -DFETCHCONTENT_SOURCE_DIR_FETK=/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk -DRPC_CFLAGS=-I/usr/include/tirpc -DBUILD_MALOC=Off .. -- The C compiler identification is GNU 16.2.0 -- The CXX compiler identification is GNU 16.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/x86_64-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/x86_64-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Install prefix: /usr -- -- APBS Static build: Off -- Building shared libs: ON -- Find-library suffixes: .so;.so;.a -- -- Building FETK from commit 57195e55351e04ce6ee0ef56a143c996a9aee7e2 CMake Deprecation Warning at debian/external_deps/fetk/CMakeLists.txt:2 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- FETK set_basic_vars_and_paths: FALSE, FETK -- Setting project paths -- Install prefix: /usr -- FETK static build: OFF -- Building shared libs: ON -- Find-library suffixes: .so;.so;.so;.a CMake Deprecation Warning at debian/external_deps/fetk/punc/CMakeLists.txt:2 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. Configuring build for PUNC -- FETK set_basic_vars_and_paths: FALSE, punc -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of mode_t -- Check size of mode_t - done -- Check size of pid_t -- Check size of pid_t - done -- Check size of size_t -- Check size of size_t - done -- Looking for 4 include files stdlib.h, ..., float.h -- Looking for 4 include files stdlib.h, ..., float.h - found -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file sys/socket.h -- Looking for include file sys/socket.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file sys/un.h -- Looking for include file sys/un.h - found -- Looking for include file sys/wait.h -- Looking for include file sys/wait.h - found -- Looking for include file netinet/in.h -- Looking for include file netinet/in.h - found -- Looking for include file arpa/inet.h -- Looking for include file arpa/inet.h - found -- Looking for include file netdb.h -- Looking for include file netdb.h - found -- Looking for include file sys/stat.h -- Looking for include file sys/stat.h - found -- Looking for include file fcntl.h -- Looking for include file fcntl.h - found -- Looking for include file rpc/rpc.h -- Looking for include file rpc/rpc.h - found -- Looking for getcwd -- Looking for getcwd - found -- Looking for O_NONBLOCK -- Looking for O_NONBLOCK - found -- Will build vf2c -- Looking for sgemm_ -- Looking for sgemm_ - not found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for sgemm_ -- Looking for sgemm_ - found -- Found BLAS: /usr/lib/x86_64-linux-gnu/libblas.so -- Performing Test SUPERLU_HAS_GLOBAL_MEM_USAGE_T -- Performing Test SUPERLU_HAS_GLOBAL_MEM_USAGE_T - Success -- Performing Test SUPERLU_HAS_CLEAN_ENUMS -- Performing Test SUPERLU_HAS_CLEAN_ENUMS - Success -- Performing Test SUPERLU_HAS_GLOBALLU_T -- Performing Test SUPERLU_HAS_GLOBALLU_T - Success -- Found SuperLU: /usr/include/superlu (found version "5.0") -- Found ARPACK: libraries at /usr/lib/x86_64-linux-gnu/libarpack.so -- Will build CGCODE -- Building vf2c -- Type: EXTERNAL_HEADERS -- Items: punc/varpack.h;punc/vblas.h;punc/vcgcode.h;punc/vlapack.h;punc/vpmg.h;punc/vf2c.h -- Type: INTERNAL_HEADERS -- Items: f2c.h;fio.h;fmt.h;fp.h;lio.h;rawio.h;signal1.h;sysdep1.h -- Type: SOURCES -- Items: f77vers.c;i77vers.c;s_rnge.c;abort_.c;exit_.c;getarg_.c;iargc_.c;getenv_.c;signal_.c;s_stop.c;s_paus.c;system_.c;cabs.c;derf_.c;derfc_.c;erf_.c;erfc_.c;sig_die.c;uninit.c;pow_ci.c;pow_dd.c;pow_di.c;pow_hh.c;pow_ii.c;pow_ri.c;pow_zi.c;pow_zz.c;c_abs.c;c_cos.c;c_div.c;c_exp.c;c_log.c;c_sin.c;c_sqrt.c;z_abs.c;z_cos.c;z_div.c;z_exp.c;z_log.c;z_sin.c;z_sqrt.c;r_abs.c;r_acos.c;r_asin.c;r_atan.c;r_atn2.c;r_cnjg.c;r_cos.c;r_cosh.c;r_dim.c;r_exp.c;r_imag.c;r_int.c;r_lg10.c;r_log.c;r_mod.c;r_nint.c;r_sign.c;r_sin.c;r_sinh.c;r_sqrt.c;r_tan.c;r_tanh.c;d_abs.c;d_acos.c;d_asin.c;d_atan.c;d_atn2.c;d_cnjg.c;d_cos.c;d_cosh.c;d_dim.c;d_exp.c;d_imag.c;d_int.c;d_lg10.c;d_log.c;d_mod.c;d_nint.c;d_prod.c;d_sign.c;d_sin.c;d_sinh.c;d_sqrt.c;d_tan.c;d_tanh.c;i_abs.c;i_dim.c;i_dnnt.c;i_indx.c;i_len.c;i_mod.c;i_nint.c;i_sign.c;lbitbits.c;lbitshft.c;h_abs.c;h_dim.c;h_dnnt.c;h_indx.c;h_len.c;h_mod.c;h_nint.c;h_sign.c;l_ge.c;l_gt.c;l_le.c;l_lt.c;hl_ge.c;hl_gt.c;hl_le.c;hl_lt.c;ef1asc_.c;ef1cmc_.c;f77_aloc.c;s_cat.c;s_cmp.c;s_copy.c;dtime_.c;etime_.c;backspac.c;close.c;dfe.c;dolio.c;due.c;endfile.c;err.c;fmt.c;fmtlib.c;ftell_.c;iio.c;ilnw.c;inquire.c;lread.c;lwrite.c;open.c;rdfmt.c;rewind.c;rsfe.c;rsli.c;rsne.c;sfe.c;sue.c;typesize.c;uio.c;util.c;wref.c;wrtfmt.c;wsfe.c;wsle.c;wsne.c;xwsne.c;main.c -- Building cgcode -- Type: INTERNAL_HEADERS -- Items: vcgcode.h -- Type: SOURCES -- Items: scgdrv.c;scg.c;scr.c;scrind.c;spcg.c;scgnr.c;scgne.c;spcgnr.c;spcgne.c;sppcg.c;spcgca.c;sdpchb.c;scbfix.c;sckchb.c;scgchk.c;sonest.c;msstop.c;r1mach.c;sratqr.c;dcgdrv.c;dcg.c;dcr.c;dcrind.c;dpcg.c;dcgnr.c;dcgne.c;dpcgnr.c;dpcgne.c;dppcg.c;dpcgca.c;ddpchb.c;dcbfix.c;dckchb.c;dcgchk.c;donest.c;mdstop.c;d1mach.c;dratqr.c;depsln.c -- Type: INTERNAL_HEADERS -- Items: /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/punccf.h -- Type: SOURCES -- Items: punc_base.c -- Type: EXTERNAL_HEADERS -- Items: punc/punc.h;punc/punc_base.h -- Type: INTERNAL_HEADERS -- Items: punc_base_p.h CMake Deprecation Warning at debian/external_deps/fetk/gamer/CMakeLists.txt:2 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. Configuring build for GAMER -- FETK set_basic_vars_and_paths: FALSE, gamer -- Type: INTERNAL_HEADERS -- Items: /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src/gamercf.h -- Type: SOURCES -- Items: gamer_base.c -- Type: EXTERNAL_HEADERS -- Items: gamer/gamer.h;gamer/gamer_base.h -- Type: INTERNAL_HEADERS -- Items: gamer_base_p.h -- Type: SOURCES -- Items: triangle.c -- Type: EXTERNAL_HEADERS -- Items: gamer/triangle.h -- Type: INTERNAL_HEADERS -- Items: triangle_p.h -- Type: SOURCES -- Items: predicates.cpp;tetgen.cpp -- Type: EXTERNAL_HEADERS -- Items: gamer/tetgen.h -- Type: INTERNAL_HEADERS -- Items: tetgen_p.h -- Type: SOURCES -- Items: CorrectNormals.C;GenerateSphereMesh.C;MarchingCube.C;PDB2Mesh.C;PDB2Volume.C;ReadLattice.C;ReadPDB.C;ReadWriteMesh.C;RegionGrowing.C;SurfaceMesh.C;SurfExtract.C;SurfRefine.C;SurfSmooth.C -- Type: EXTERNAL_HEADERS -- Items: gamer/biom.h -- Type: INTERNAL_HEADERS -- Items: MarchingCube.h;PDB2Volume.h CMake Deprecation Warning at debian/external_deps/fetk/mc/CMakeLists.txt:2 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. Configuring build for MC -- FETK set_basic_vars_and_paths: FALSE, mc -- Found UMFPACK: /usr/include/suitesparse -- @@@@ finding blas -- @@@@ finding lapack -- %%%%% list of libraries: -- Testing libraries: TRUE -- CMAKE_REQUIRED_LIBRARIES: /usr/lib/x86_64-linux-gnu/libblas.so;-lm;-ldl -- checking for function cheev_ -- result: TRUE -- Found LAPACK: /usr/lib/x86_64-linux-gnu/libblas.so;-lm;-ldl -- @@@@ finding amd -- Found AMD headers in: /usr/include/suitesparse -- Found AMD library: /usr/lib/x86_64-linux-gnu/libamd.so -- @@@@ finding camd -- Found CAMD headers in: /usr/include/suitesparse -- Found CAMD library: /usr/lib/x86_64-linux-gnu/libcamd.so -- @@@@ finding colamd -- Found COLAMD headers in: /usr/include/suitesparse -- Found COLAMD library: /usr/lib/x86_64-linux-gnu/libcolamd.so -- @@@@ finding ccolamd -- Found CCOLAMD headers in: /usr/include/suitesparse -- Found CCOLAMD library: /usr/lib/x86_64-linux-gnu/libccolamd.so -- @@@@ finding cholmod -- Found CHOLMOD headers in: /usr/include/suitesparse -- Found CHOLMOD library: /usr/lib/x86_64-linux-gnu/libcholmod.so -- @@@@ finding parseqr -- Found SUITESPARSEQR headers in: /usr/include/suitesparse -- Found SUITESPARSEQR library: /usr/lib/x86_64-linux-gnu/libspqr.so -- Did not find Intel TBB library, assuming SuiteSparseQR was not compiled with TBB. -- @@@@ finding config -- Found SUITESPARSE_CONFIG headers in: /usr/include/suitesparse -- Found SUITESPARSE_CONFIG library: /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so -- Found LIBRT library: /usr/lib/x86_64-linux-gnu/librt.a -- Adding librt: /usr/lib/x86_64-linux-gnu/librt.a to SuiteSparse_config libraries (required on Linux & Unix [not OSX] if SuiteSparse is compiled with timing). -- @@@@ finding metis -- Did not find METIS library (optional SuiteSparse dependency) -- Found SuiteSparse: TRUE (found version "..") -- Type: INTERNAL_HEADERS -- Items: /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src/mccf.h -- Type: SOURCES -- Items: mc_base.c -- Type: EXTERNAL_HEADERS -- Items: mc/mc_base.h;mc/mc.h -- Type: INTERNAL_HEADERS -- Items: mc_base_p.h -- Type: SOURCES -- Items: bmat.c;bsolv.c;bvec.c;mat.c;matcopy.c;matln.c;mtool.c;slu.c;vec.c;vec3.c;zslu.c -- Type: EXTERNAL_HEADERS -- Items: mc/bam.h;mc/bmat.h;mc/bvec.h;mc/mat.h;mc/mtool.h;mc/slu.h;mc/vec.h;mc/vec3.h;mc/zslu.h -- Type: INTERNAL_HEADERS -- Items: bam_p.h;bmat_p.h;bvec_p.h;mat_p.h;mtool_p.h;slu_p.h;vec_p.h;vec3_p.h;zslu_p.h -- Type: SOURCES -- Items: whb.c;bvechb.c;hbtools.c;rcmat.c;brcmat.c;subopt.c -- Type: EXTERNAL_HEADERS -- Items: mc/whb.h -- Type: INTERNAL_HEADERS -- Items: brcmat_p.h;bvechb_p.h;cholesky_p.h;hbtools_p.h;rcmat_p.h;subopt_p.h;whb_p.h -- Type: SOURCES -- Items: aprx.c;assem.c;bnode.c;estim.c;eval.c;io.c;node.c;parti.c;re.c -- Type: EXTERNAL_HEADERS -- Items: mc/aprx.h;mc/bnode.h;mc/node.h;mc/re.h -- Type: INTERNAL_HEADERS -- Items: aprx_p.h;bnode_p.h;node_p.h;re_p.h -- Type: SOURCES -- Items: vel.c;ves.c;gem.c;gemchk.c;gemdisp.c;gemg.c;gemgen.c;gemio.c;gemref.c;gemunref.c;gemcube.c -- Type: EXTERNAL_HEADERS -- Items: mc/gem.h;mc/vel.h;mc/ves.h -- Type: INTERNAL_HEADERS -- Items: gem_p.h;vel_p.h;ves_p.h -- Type: SOURCES -- Items: pde.c -- Type: EXTERNAL_HEADERS -- Items: mc/pde.h -- Type: INTERNAL_HEADERS -- Items: pde_p.h -- Type: SOURCES -- Items: am.c;lsolv.c;nsolv.c -- Type: EXTERNAL_HEADERS -- Items: mc/am.h;mc/nam.h -- Type: INTERNAL_HEADERS -- Items: am_p.h;nam_p.h -- Type: SOURCES -- Items: dyn.c;svio.c -- Type: EXTERNAL_HEADERS -- Items: mc/dyn.h -- Type: INTERNAL_HEADERS -- Items: dyn_p.h;svio_p.h -- Type: SOURCES -- Items: mcsh.c -- Type: EXTERNAL_HEADERS -- Items: mc/mcsh.h -- Type: INTERNAL_HEADERS -- Items: mcsh_p.h -- ############################################################# -- ** PROJECT NAME: APBS -- ** PROJECT DESC: Adaptive Poisson-Boltzmann Solver -- ** PROJECT URL: http://www.poissonboltzmann.org/ -- ** VERSION_DATA: 3.4.1 -- ** CURRENT_TIME: 2025-09-21T15:25:00 -- ** CURRENT_YEAR: 2025 -- Setting project paths -- Setting lookup paths for headers and libraries -- Computing machine epsilon values -- Floating point epsilon is 2.220446e-16 -- Double precision epsilon is 2.220446e-16 -- Looking for time -- Looking for time - found -- Looking for rand -- Looking for rand - found -- Looking for srand -- Looking for srand - found -- Found Intl: built in to C library -- Performing Test Iconv_IS_BUILT_IN -- Performing Test Iconv_IS_BUILT_IN - Success -- Found Iconv: built in to C library -- @@@@ finding blas -- @@@@ finding lapack -- %%%%% list of libraries: -- Testing libraries: TRUE -- CMAKE_REQUIRED_LIBRARIES: /usr/lib/x86_64-linux-gnu/libblas.so;-lm;-ldl -- checking for function cheev_ -- result: TRUE -- @@@@ finding amd -- Found AMD headers in: /usr/include/suitesparse -- Found AMD library: /usr/lib/x86_64-linux-gnu/libamd.so -- @@@@ finding camd -- Found CAMD headers in: /usr/include/suitesparse -- Found CAMD library: /usr/lib/x86_64-linux-gnu/libcamd.so -- @@@@ finding colamd -- Found COLAMD headers in: /usr/include/suitesparse -- Found COLAMD library: /usr/lib/x86_64-linux-gnu/libcolamd.so -- @@@@ finding ccolamd -- Found CCOLAMD headers in: /usr/include/suitesparse -- Found CCOLAMD library: /usr/lib/x86_64-linux-gnu/libccolamd.so -- @@@@ finding cholmod -- Found CHOLMOD headers in: /usr/include/suitesparse -- Found CHOLMOD library: /usr/lib/x86_64-linux-gnu/libcholmod.so -- @@@@ finding parseqr -- Found SUITESPARSEQR headers in: /usr/include/suitesparse -- Found SUITESPARSEQR library: /usr/lib/x86_64-linux-gnu/libspqr.so -- Did not find Intel TBB library, assuming SuiteSparseQR was not compiled with TBB. -- @@@@ finding config -- Found SUITESPARSE_CONFIG headers in: /usr/include/suitesparse -- Found SUITESPARSE_CONFIG library: /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so -- Found LIBRT library: /usr/lib/x86_64-linux-gnu/librt.a -- Adding librt: /usr/lib/x86_64-linux-gnu/librt.a to SuiteSparse_config libraries (required on Linux & Unix [not OSX] if SuiteSparse is compiled with timing). -- @@@@ finding metis -- Did not find METIS library (optional SuiteSparse dependency) -- UMFPack libraries: /usr/lib/x86_64-linux-gnu/libumfpack.so -- SUITESPARSE_INCLUDE_DIRS: /usr/include/suitesparse -- SUITESPARSE_LIBRARIES: /usr/lib/x86_64-linux-gnu/libspqr.so;/usr/lib/x86_64-linux-gnu/libcholmod.so;/usr/lib/x86_64-linux-gnu/libccolamd.so;/usr/lib/x86_64-linux-gnu/libcamd.so;/usr/lib/x86_64-linux-gnu/libcolamd.so;/usr/lib/x86_64-linux-gnu/libamd.so;/usr/lib/x86_64-linux-gnu/libblas.so;-lm;-ldl;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so;/usr/lib/x86_64-linux-gnu/librt.a -- Checking for MPI -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- MPI support enabled -- Inline functions enabled -- Verbose debugging mode enabled -- Checking for OpenMP -- Found OpenMP_C: -fopenmp (found version "5.2") -- Found OpenMP_CXX: -fopenmp (found version "5.2") -- Found OpenMP: TRUE (found version "5.2") -- OpenMP support enabled -- Building of iAPBS interface disabled CMake Deprecation Warning at src/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- Adding apbs_generic -- With source files nosh.c;mgparm.c;femparm.c;pbamparm.c;pbsamparm.c;pbeparm.c;bemparm.c;geoflowparm.c;apolparm.c;vacc.c;valist.c;vatom.c;vpbe.c;vcap.c;vclist.c;vstring.c;vparam.c;vgreen.c -- With external header files nosh.h;mgparm.h;femparm.h;pbamparm.h;pbsamparm.h;pbeparm.h;bemparm.h;geoflowparm.h;apolparm.h;vacc.h;valist.h;vatom.h;vpbe.h;vcap.h;vclist.h;vstring.h;vparam.h;vgreen.h;vmatrix.h;vhal.h;vunit.h -- With internal header files -- With library dependencies mc;util;dl;m;stdc++;/usr/lib/x86_64-linux-gnu/libumfpack.so;/usr/lib/x86_64-linux-gnu/libspqr.so;/usr/lib/x86_64-linux-gnu/libcholmod.so;/usr/lib/x86_64-linux-gnu/libccolamd.so;/usr/lib/x86_64-linux-gnu/libcamd.so;/usr/lib/x86_64-linux-gnu/libcolamd.so;/usr/lib/x86_64-linux-gnu/libamd.so;/usr/lib/x86_64-linux-gnu/libblas.so;-lm;-ldl;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so;/usr/lib/x86_64-linux-gnu/librt.a;/usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so;-fopenmp -- Added apbs_generic -- Adding apbs_pmgc -- With source files buildAd.c;buildBd.c;buildGd.c;buildPd.c;cgd.c;gsd.c;matvecd.c;mgcsd.c;mgdrvd.c;mgsubd.c;mikpckd.c;mlinpckd.c;mypdec.c;newtond.c;newdrvd.c;powerd.c;smoothd.c;mgfasd.c -- With external header files buildAd.h;buildBd.h;buildGd.h;buildPd.h;cgd.h;gsd.h;matvecd.h;mgcsd.h;mgdrvd.h;mgsubd.h;mikpckd.h;mlinpckd.h;mypdec.h;newtond.h;newdrvd.h;powerd.h;smoothd.h;mgfasd.h -- With internal header files -- With library dependencies mc;util;dl;m;stdc++;/usr/lib/x86_64-linux-gnu/libumfpack.so;/usr/lib/x86_64-linux-gnu/libspqr.so;/usr/lib/x86_64-linux-gnu/libcholmod.so;/usr/lib/x86_64-linux-gnu/libccolamd.so;/usr/lib/x86_64-linux-gnu/libcamd.so;/usr/lib/x86_64-linux-gnu/libcolamd.so;/usr/lib/x86_64-linux-gnu/libamd.so;/usr/lib/x86_64-linux-gnu/libblas.so;-lm;-ldl;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so;/usr/lib/x86_64-linux-gnu/librt.a;/usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so;-fopenmp -- Added apbs_pmgc -- Adding apbs_mg -- With source files vgrid.c;vmgrid.c;vopot.c;vpmg.c;vpmgp.c -- With external header files vgrid.h;vmgrid.h;vopot.h;vpmg.h;vpmgp.h -- With internal header files -- With library dependencies mc;util;dl;m;stdc++;/usr/lib/x86_64-linux-gnu/libumfpack.so;/usr/lib/x86_64-linux-gnu/libspqr.so;/usr/lib/x86_64-linux-gnu/libcholmod.so;/usr/lib/x86_64-linux-gnu/libccolamd.so;/usr/lib/x86_64-linux-gnu/libcamd.so;/usr/lib/x86_64-linux-gnu/libcolamd.so;/usr/lib/x86_64-linux-gnu/libamd.so;/usr/lib/x86_64-linux-gnu/libblas.so;-lm;-ldl;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so;/usr/lib/x86_64-linux-gnu/librt.a;/usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so;-fopenmp;apbs_generic;apbs_pmgc -- Added apbs_mg -- Adding apbs_fem -- With source files vcsm.c;vfetk.c;vpee.c -- With external header files vcsm.h;vfetk.h;vpee.h -- With internal header files -- With library dependencies mc;util;dl;m;stdc++;/usr/lib/x86_64-linux-gnu/libumfpack.so;/usr/lib/x86_64-linux-gnu/libspqr.so;/usr/lib/x86_64-linux-gnu/libcholmod.so;/usr/lib/x86_64-linux-gnu/libccolamd.so;/usr/lib/x86_64-linux-gnu/libcamd.so;/usr/lib/x86_64-linux-gnu/libcolamd.so;/usr/lib/x86_64-linux-gnu/libamd.so;/usr/lib/x86_64-linux-gnu/libblas.so;-lm;-ldl;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so;/usr/lib/x86_64-linux-gnu/librt.a;/usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so;-fopenmp;apbs_generic -- Added apbs_fem -- Adding apbs_routines -- With source files routines.c -- With external header files -- With internal header files -- With library dependencies mc;util;dl;m;stdc++;/usr/lib/x86_64-linux-gnu/libumfpack.so;/usr/lib/x86_64-linux-gnu/libspqr.so;/usr/lib/x86_64-linux-gnu/libcholmod.so;/usr/lib/x86_64-linux-gnu/libccolamd.so;/usr/lib/x86_64-linux-gnu/libcamd.so;/usr/lib/x86_64-linux-gnu/libcolamd.so;/usr/lib/x86_64-linux-gnu/libamd.so;/usr/lib/x86_64-linux-gnu/libblas.so;-lm;-ldl;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so;/usr/lib/x86_64-linux-gnu/librt.a;/usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so;-fopenmp;mc;util;dl;m;stdc++;/usr/lib/x86_64-linux-gnu/libumfpack.so;/usr/lib/x86_64-linux-gnu/libspqr.so;/usr/lib/x86_64-linux-gnu/libcholmod.so;/usr/lib/x86_64-linux-gnu/libccolamd.so;/usr/lib/x86_64-linux-gnu/libcamd.so;/usr/lib/x86_64-linux-gnu/libcolamd.so;/usr/lib/x86_64-linux-gnu/libamd.so;/usr/lib/x86_64-linux-gnu/libblas.so;-lm;-ldl;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so;/usr/lib/x86_64-linux-gnu/librt.a;/usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so;-fopenmp;apbs_generic;apbs_pmgc;apbs_mg;apbs_fem -- Added apbs_routines -- External Headers: -- -- APBS Libraries: mc;util;dl;m;stdc++;/usr/lib/x86_64-linux-gnu/libumfpack.so;/usr/lib/x86_64-linux-gnu/libspqr.so;/usr/lib/x86_64-linux-gnu/libcholmod.so;/usr/lib/x86_64-linux-gnu/libccolamd.so;/usr/lib/x86_64-linux-gnu/libcamd.so;/usr/lib/x86_64-linux-gnu/libcolamd.so;/usr/lib/x86_64-linux-gnu/libamd.so;/usr/lib/x86_64-linux-gnu/libblas.so;-lm;-ldl;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so;/usr/lib/x86_64-linux-gnu/librt.a;/usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so;-fopenmp -- Internal Libraries: apbs_generic;apbs_pmgc;apbs_mg;apbs_fem;apbs_routines -- -- -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -- Supplemental tools enabled -- Building mesh -- libraries: apbs_generic;apbs_mg;apbs_pmgc;apbs_fem;apbs_routines -- Building manip -- libraries: apbs_generic;apbs_mg;apbs_pmgc;apbs_fem;apbs_routines CMake Deprecation Warning at tools/python/CMakeLists.txt:2 (CMAKE_POLICY): The OLD behavior for policy CMP0078 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. CMake Deprecation Warning at tools/python/CMakeLists.txt:3 (CMAKE_POLICY): The OLD behavior for policy CMP0086 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. -- Found SWIG: /usr/bin/swig (found version "4.5.1") -- Found Python3: /usr/bin/python3 (found suitable version "3.14.7", minimum required is "3.6") found components: Interpreter Development Development.Module Development.Embed -- ***** Python3 include path is: /usr/include/python3.14 -- ***** Python3 library path is: /usr/lib/x86_64-linux-gnu/libpython3.14.so -- ***** Python3 library dir is: /usr/lib/x86_64-linux-gnu CMake Warning at /usr/lib/cmake/pybind11/pybind11Tools.cmake:18 (message): Set PYBIND11_PYTHON_VERSION to search for a specific version, not PYTHON_VERSION (which is an output). Assuming that is what you meant to do and continuing anyway. Call Stack (most recent call first): /usr/lib/cmake/pybind11/pybind11Common.cmake:243 (include) /usr/lib/cmake/pybind11/pybind11Config.cmake:257 (include) tools/python-pybind/CMakeLists.txt:2 (find_package) CMake Warning (dev) at /usr/lib/cmake/pybind11/FindPythonLibsNew.cmake:101 (message): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning, or preferably upgrade to using FindPython, either by calling it explicitly before pybind11, or by setting PYBIND11_FINDPYTHON ON before pybind11. Call Stack (most recent call first): /usr/lib/cmake/pybind11/pybind11Tools.cmake:44 (find_package) /usr/lib/cmake/pybind11/pybind11Common.cmake:243 (include) /usr/lib/cmake/pybind11/pybind11Config.cmake:257 (include) tools/python-pybind/CMakeLists.txt:2 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. CMake Deprecation Warning at /usr/lib/cmake/pybind11/FindPythonLibsNew.cmake:110 (cmake_policy): The OLD behavior for policy CMP0148 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. Call Stack (most recent call first): /usr/lib/cmake/pybind11/pybind11Tools.cmake:44 (find_package) /usr/lib/cmake/pybind11/pybind11Common.cmake:243 (include) /usr/lib/cmake/pybind11/pybind11Config.cmake:257 (include) tools/python-pybind/CMakeLists.txt:2 (find_package) -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.14.7", minimum required is "3.6") -- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython3.14.so -- Performing Test HAS_FLTO_AUTO -- Performing Test HAS_FLTO_AUTO - Success -- Found pybind11: /usr/include (found version "3.1.0") -- LIBS mc;util;dl;m;stdc++;/usr/lib/x86_64-linux-gnu/libumfpack.so;/usr/lib/x86_64-linux-gnu/libspqr.so;/usr/lib/x86_64-linux-gnu/libcholmod.so;/usr/lib/x86_64-linux-gnu/libccolamd.so;/usr/lib/x86_64-linux-gnu/libcamd.so;/usr/lib/x86_64-linux-gnu/libcolamd.so;/usr/lib/x86_64-linux-gnu/libamd.so;/usr/lib/x86_64-linux-gnu/libblas.so;-lm;-ldl;/usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so;/usr/lib/x86_64-linux-gnu/librt.a;/usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so;-fopenmp -- INTERNAL_LIBS apbs_generic;apbs_pmgc;apbs_mg;apbs_fem;apbs_routines -- ******* TESTING ADDED ***************** -- Found Python3: /usr/bin/python3 (found suitable exact version "3.14.7") found components: Interpreter -- ******* FOUND TEST CASE born, born -- TEST born_test WORKING_DIRECTORY /build/apbs-56d3Iv/apbs-3.4.1/tests COMMAND /usr/bin/python3 /build/apbs-56d3Iv/apbs-3.4.1/tests/apbs_tester.py -e apbs -t born -- ******* FOUND TEST CASE actin, actin-dimer-auto -- TEST actin-dimer-auto_test WORKING_DIRECTORY /build/apbs-56d3Iv/apbs-3.4.1/tests COMMAND /usr/bin/python3 /build/apbs-56d3Iv/apbs-3.4.1/tests/apbs_tester.py -e apbs -t actin-dimer-auto -- ******* FOUND TEST CASE alkanes, alkanes -- TEST alkanes_test WORKING_DIRECTORY /build/apbs-56d3Iv/apbs-3.4.1/tests COMMAND /usr/bin/python3 /build/apbs-56d3Iv/apbs-3.4.1/tests/apbs_tester.py -e apbs -t alkanes -- ******* FOUND TEST CASE FKBP, FKBP -- TEST FKBP_test WORKING_DIRECTORY /build/apbs-56d3Iv/apbs-3.4.1/tests COMMAND /usr/bin/python3 /build/apbs-56d3Iv/apbs-3.4.1/tests/apbs_tester.py -e apbs -t FKBP -- ******* FOUND TEST CASE hca, hca-bind -- TEST hca-bind_test WORKING_DIRECTORY /build/apbs-56d3Iv/apbs-3.4.1/tests COMMAND /usr/bin/python3 /build/apbs-56d3Iv/apbs-3.4.1/tests/apbs_tester.py -e apbs -t hca-bind -- ******* FOUND TEST CASE ionize, ionize -- TEST ionize_test WORKING_DIRECTORY /build/apbs-56d3Iv/apbs-3.4.1/tests COMMAND /usr/bin/python3 /build/apbs-56d3Iv/apbs-3.4.1/tests/apbs_tester.py -e apbs -t ionize -- ******* FOUND TEST CASE ion, ion-pmf -- TEST ion-pmf_test WORKING_DIRECTORY /build/apbs-56d3Iv/apbs-3.4.1/tests COMMAND /usr/bin/python3 /build/apbs-56d3Iv/apbs-3.4.1/tests/apbs_tester.py -e apbs -t ion-pmf -- ******* FOUND TEST CASE pka, pka-lig -- TEST pka-lig_test WORKING_DIRECTORY /build/apbs-56d3Iv/apbs-3.4.1/tests COMMAND /usr/bin/python3 /build/apbs-56d3Iv/apbs-3.4.1/tests/apbs_tester.py -e apbs -t pka-lig -- ******* FOUND TEST CASE point, point-pmf -- TEST point-pmf_test WORKING_DIRECTORY /build/apbs-56d3Iv/apbs-3.4.1/tests COMMAND /usr/bin/python3 /build/apbs-56d3Iv/apbs-3.4.1/tests/apbs_tester.py -e apbs -t point-pmf -- ******* FOUND TEST CASE solv, solv -- TEST solv_test WORKING_DIRECTORY /build/apbs-56d3Iv/apbs-3.4.1/tests COMMAND /usr/bin/python3 /build/apbs-56d3Iv/apbs-3.4.1/tests/apbs_tester.py -e apbs -t solv -- Configuring done (7.1s) -- Generating done (0.3s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY ENABLE_READLINE ENABLE_ZLIB PKGCONFIG_EXECUTABLE -- Build files have been written to: /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1' dh_auto_build -O--buildsystem=cmake cd obj-x86_64-linux-gnu && make -j2 INSTALL="install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/apbs-56d3Iv/apbs-3.4.1 -B/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/CMakeFiles /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make -f _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/build.make 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C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/f77vers.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/f77vers.c.o -MF CMakeFiles/vf2c.dir/f77vers.c.o.d -o CMakeFiles/vf2c.dir/f77vers.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/f77vers.c [ 1%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i77vers.c.o cd 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&& /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/exit_.c.o -MF CMakeFiles/vf2c.dir/exit_.c.o.d -o CMakeFiles/vf2c.dir/exit_.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/exit_.c [ 2%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scrind.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scrind.c.o -MF CMakeFiles/cgcode.dir/scrind.c.o.d -o CMakeFiles/cgcode.dir/scrind.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/scrind.c [ 3%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/getarg_.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc 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-I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/iargc_.c.o -MF CMakeFiles/vf2c.dir/iargc_.c.o.d -o CMakeFiles/vf2c.dir/iargc_.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/iargc_.c [ 4%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcg.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcg.c.o -MF CMakeFiles/cgcode.dir/spcg.c.o.d -o CMakeFiles/cgcode.dir/spcg.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/spcg.c [ 4%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/getenv_.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/getenv_.c.o -MF CMakeFiles/vf2c.dir/getenv_.c.o.d -o CMakeFiles/vf2c.dir/getenv_.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/getenv_.c [ 4%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgnr.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgnr.c.o -MF CMakeFiles/cgcode.dir/scgnr.c.o.d -o CMakeFiles/cgcode.dir/scgnr.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/scgnr.c [ 5%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/signal_.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/signal_.c.o -MF CMakeFiles/vf2c.dir/signal_.c.o.d -o CMakeFiles/vf2c.dir/signal_.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/signal_.c [ 5%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgne.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgne.c.o -MF CMakeFiles/cgcode.dir/scgne.c.o.d -o CMakeFiles/cgcode.dir/scgne.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/scgne.c [ 5%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_stop.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_stop.c.o -MF CMakeFiles/vf2c.dir/s_stop.c.o.d -o CMakeFiles/vf2c.dir/s_stop.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/s_stop.c [ 5%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcgnr.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcgnr.c.o -MF CMakeFiles/cgcode.dir/spcgnr.c.o.d -o CMakeFiles/cgcode.dir/spcgnr.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/spcgnr.c [ 5%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_paus.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_paus.c.o -MF CMakeFiles/vf2c.dir/s_paus.c.o.d -o CMakeFiles/vf2c.dir/s_paus.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/s_paus.c [ 5%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/system_.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/system_.c.o -MF CMakeFiles/vf2c.dir/system_.c.o.d -o CMakeFiles/vf2c.dir/system_.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/system_.c [ 6%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcgne.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcgne.c.o -MF CMakeFiles/cgcode.dir/spcgne.c.o.d -o CMakeFiles/cgcode.dir/spcgne.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/spcgne.c [ 7%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/cabs.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/cabs.c.o -MF CMakeFiles/vf2c.dir/cabs.c.o.d -o CMakeFiles/vf2c.dir/cabs.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/cabs.c [ 7%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/derf_.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/derf_.c.o -MF CMakeFiles/vf2c.dir/derf_.c.o.d -o CMakeFiles/vf2c.dir/derf_.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/derf_.c [ 7%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sppcg.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sppcg.c.o -MF CMakeFiles/cgcode.dir/sppcg.c.o.d -o CMakeFiles/cgcode.dir/sppcg.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/sppcg.c [ 7%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/derfc_.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/derfc_.c.o -MF CMakeFiles/vf2c.dir/derfc_.c.o.d -o CMakeFiles/vf2c.dir/derfc_.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/derfc_.c [ 8%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/erf_.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/erf_.c.o -MF CMakeFiles/vf2c.dir/erf_.c.o.d -o CMakeFiles/vf2c.dir/erf_.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/erf_.c [ 8%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcgca.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcgca.c.o -MF CMakeFiles/cgcode.dir/spcgca.c.o.d -o CMakeFiles/cgcode.dir/spcgca.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/spcgca.c [ 8%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/erfc_.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/erfc_.c.o -MF CMakeFiles/vf2c.dir/erfc_.c.o.d -o CMakeFiles/vf2c.dir/erfc_.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/erfc_.c [ 8%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/sig_die.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/sig_die.c.o -MF CMakeFiles/vf2c.dir/sig_die.c.o.d -o CMakeFiles/vf2c.dir/sig_die.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/sig_die.c [ 9%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sdpchb.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sdpchb.c.o -MF CMakeFiles/cgcode.dir/sdpchb.c.o.d -o CMakeFiles/cgcode.dir/sdpchb.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/sdpchb.c [ 9%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/uninit.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD 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-MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scbfix.c.o -MF CMakeFiles/cgcode.dir/scbfix.c.o.d -o CMakeFiles/cgcode.dir/scbfix.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/scbfix.c [ 10%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_ci.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_ci.c.o -MF CMakeFiles/vf2c.dir/pow_ci.c.o.d -o CMakeFiles/vf2c.dir/pow_ci.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/pow_ci.c [ 10%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sckchb.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sckchb.c.o -MF CMakeFiles/cgcode.dir/sckchb.c.o.d -o CMakeFiles/cgcode.dir/sckchb.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/sckchb.c [ 10%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_dd.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_dd.c.o -MF CMakeFiles/vf2c.dir/pow_dd.c.o.d -o CMakeFiles/vf2c.dir/pow_dd.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/pow_dd.c [ 10%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgchk.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgchk.c.o -MF CMakeFiles/cgcode.dir/scgchk.c.o.d -o CMakeFiles/cgcode.dir/scgchk.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/scgchk.c [ 10%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_di.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_di.c.o -MF CMakeFiles/vf2c.dir/pow_di.c.o.d -o CMakeFiles/vf2c.dir/pow_di.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/pow_di.c [ 10%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_hh.c.o [ 11%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sonest.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_hh.c.o -MF CMakeFiles/vf2c.dir/pow_hh.c.o.d -o CMakeFiles/vf2c.dir/pow_hh.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/pow_hh.c cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sonest.c.o -MF CMakeFiles/cgcode.dir/sonest.c.o.d -o CMakeFiles/cgcode.dir/sonest.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/sonest.c [ 11%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/msstop.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/msstop.c.o -MF CMakeFiles/cgcode.dir/msstop.c.o.d -o CMakeFiles/cgcode.dir/msstop.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/msstop.c [ 12%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_ii.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_ii.c.o -MF CMakeFiles/vf2c.dir/pow_ii.c.o.d -o CMakeFiles/vf2c.dir/pow_ii.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/pow_ii.c [ 12%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/r1mach.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/r1mach.c.o -MF CMakeFiles/cgcode.dir/r1mach.c.o.d -o CMakeFiles/cgcode.dir/r1mach.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/r1mach.c [ 12%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_ri.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_ri.c.o -MF CMakeFiles/vf2c.dir/pow_ri.c.o.d -o CMakeFiles/vf2c.dir/pow_ri.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/pow_ri.c [ 13%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sratqr.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sratqr.c.o -MF CMakeFiles/cgcode.dir/sratqr.c.o.d -o CMakeFiles/cgcode.dir/sratqr.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/sratqr.c [ 13%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_zi.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_zi.c.o -MF CMakeFiles/vf2c.dir/pow_zi.c.o.d -o CMakeFiles/vf2c.dir/pow_zi.c.o -c 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14%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgdrv.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgdrv.c.o -MF CMakeFiles/cgcode.dir/dcgdrv.c.o.d -o CMakeFiles/cgcode.dir/dcgdrv.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcgdrv.c [ 14%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_abs.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_abs.c.o -MF CMakeFiles/vf2c.dir/c_abs.c.o.d -o CMakeFiles/vf2c.dir/c_abs.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/c_abs.c [ 14%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_cos.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_cos.c.o -MF CMakeFiles/vf2c.dir/c_cos.c.o.d -o CMakeFiles/vf2c.dir/c_cos.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/c_cos.c [ 14%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcg.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcg.c.o -MF CMakeFiles/cgcode.dir/dcg.c.o.d -o CMakeFiles/cgcode.dir/dcg.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcg.c [ 14%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_div.c.o cd 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/usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_exp.c.o -MF CMakeFiles/vf2c.dir/c_exp.c.o.d -o CMakeFiles/vf2c.dir/c_exp.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/c_exp.c [ 15%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcr.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcr.c.o -MF CMakeFiles/cgcode.dir/dcr.c.o.d -o CMakeFiles/cgcode.dir/dcr.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcr.c [ 15%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_log.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_log.c.o -MF CMakeFiles/vf2c.dir/c_log.c.o.d -o CMakeFiles/vf2c.dir/c_log.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/c_log.c [ 15%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_sin.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_sin.c.o -MF CMakeFiles/vf2c.dir/c_sin.c.o.d -o CMakeFiles/vf2c.dir/c_sin.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/c_sin.c [ 16%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcrind.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcrind.c.o -MF CMakeFiles/cgcode.dir/dcrind.c.o.d -o CMakeFiles/cgcode.dir/dcrind.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcrind.c [ 17%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_sqrt.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_sqrt.c.o -MF CMakeFiles/vf2c.dir/c_sqrt.c.o.d -o CMakeFiles/vf2c.dir/c_sqrt.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/c_sqrt.c [ 17%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcg.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcg.c.o -MF CMakeFiles/cgcode.dir/dpcg.c.o.d -o CMakeFiles/cgcode.dir/dpcg.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dpcg.c [ 17%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_abs.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_abs.c.o -MF CMakeFiles/vf2c.dir/z_abs.c.o.d -o CMakeFiles/vf2c.dir/z_abs.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/z_abs.c [ 17%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_cos.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_cos.c.o -MF CMakeFiles/vf2c.dir/z_cos.c.o.d -o CMakeFiles/vf2c.dir/z_cos.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/z_cos.c [ 17%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgnr.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgnr.c.o -MF CMakeFiles/cgcode.dir/dcgnr.c.o.d -o CMakeFiles/cgcode.dir/dcgnr.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcgnr.c [ 17%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_div.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_div.c.o -MF CMakeFiles/vf2c.dir/z_div.c.o.d -o CMakeFiles/vf2c.dir/z_div.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/z_div.c [ 18%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_exp.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_exp.c.o -MF CMakeFiles/vf2c.dir/z_exp.c.o.d -o CMakeFiles/vf2c.dir/z_exp.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/z_exp.c [ 18%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgne.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgne.c.o -MF CMakeFiles/cgcode.dir/dcgne.c.o.d -o CMakeFiles/cgcode.dir/dcgne.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcgne.c [ 18%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_log.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_log.c.o -MF CMakeFiles/vf2c.dir/z_log.c.o.d -o CMakeFiles/vf2c.dir/z_log.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/z_log.c [ 18%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_sin.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_sin.c.o -MF CMakeFiles/vf2c.dir/z_sin.c.o.d -o CMakeFiles/vf2c.dir/z_sin.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/z_sin.c [ 19%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_sqrt.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_sqrt.c.o -MF CMakeFiles/vf2c.dir/z_sqrt.c.o.d -o CMakeFiles/vf2c.dir/z_sqrt.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/z_sqrt.c [ 20%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcgnr.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcgnr.c.o -MF CMakeFiles/cgcode.dir/dpcgnr.c.o.d -o CMakeFiles/cgcode.dir/dpcgnr.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dpcgnr.c [ 20%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_abs.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_abs.c.o -MF CMakeFiles/vf2c.dir/r_abs.c.o.d -o CMakeFiles/vf2c.dir/r_abs.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_abs.c [ 20%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_acos.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_acos.c.o -MF CMakeFiles/vf2c.dir/r_acos.c.o.d -o CMakeFiles/vf2c.dir/r_acos.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_acos.c [ 20%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_asin.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_asin.c.o -MF CMakeFiles/vf2c.dir/r_asin.c.o.d -o CMakeFiles/vf2c.dir/r_asin.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_asin.c [ 21%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_atan.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_atan.c.o -MF CMakeFiles/vf2c.dir/r_atan.c.o.d -o CMakeFiles/vf2c.dir/r_atan.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_atan.c [ 21%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcgne.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcgne.c.o -MF CMakeFiles/cgcode.dir/dpcgne.c.o.d -o CMakeFiles/cgcode.dir/dpcgne.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dpcgne.c [ 21%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_atn2.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_atn2.c.o -MF CMakeFiles/vf2c.dir/r_atn2.c.o.d -o CMakeFiles/vf2c.dir/r_atn2.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_atn2.c [ 21%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_cnjg.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_cnjg.c.o -MF CMakeFiles/vf2c.dir/r_cnjg.c.o.d -o CMakeFiles/vf2c.dir/r_cnjg.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_cnjg.c [ 22%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_cos.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_cos.c.o -MF CMakeFiles/vf2c.dir/r_cos.c.o.d -o CMakeFiles/vf2c.dir/r_cos.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_cos.c [ 22%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_cosh.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_cosh.c.o -MF CMakeFiles/vf2c.dir/r_cosh.c.o.d -o CMakeFiles/vf2c.dir/r_cosh.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_cosh.c [ 22%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dppcg.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dppcg.c.o -MF CMakeFiles/cgcode.dir/dppcg.c.o.d -o CMakeFiles/cgcode.dir/dppcg.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dppcg.c [ 22%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_dim.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_dim.c.o -MF CMakeFiles/vf2c.dir/r_dim.c.o.d -o CMakeFiles/vf2c.dir/r_dim.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_dim.c [ 22%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_exp.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_exp.c.o -MF CMakeFiles/vf2c.dir/r_exp.c.o.d -o CMakeFiles/vf2c.dir/r_exp.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_exp.c [ 23%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcgca.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcgca.c.o -MF CMakeFiles/cgcode.dir/dpcgca.c.o.d -o CMakeFiles/cgcode.dir/dpcgca.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dpcgca.c [ 24%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_imag.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_imag.c.o -MF CMakeFiles/vf2c.dir/r_imag.c.o.d -o CMakeFiles/vf2c.dir/r_imag.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_imag.c [ 24%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_int.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_int.c.o -MF CMakeFiles/vf2c.dir/r_int.c.o.d -o CMakeFiles/vf2c.dir/r_int.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_int.c [ 24%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/ddpchb.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/ddpchb.c.o -MF CMakeFiles/cgcode.dir/ddpchb.c.o.d -o CMakeFiles/cgcode.dir/ddpchb.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/ddpchb.c [ 24%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_lg10.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_lg10.c.o -MF CMakeFiles/vf2c.dir/r_lg10.c.o.d -o CMakeFiles/vf2c.dir/r_lg10.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_lg10.c [ 24%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcbfix.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcbfix.c.o -MF CMakeFiles/cgcode.dir/dcbfix.c.o.d -o CMakeFiles/cgcode.dir/dcbfix.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcbfix.c [ 25%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_log.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_log.c.o -MF CMakeFiles/vf2c.dir/r_log.c.o.d -o CMakeFiles/vf2c.dir/r_log.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_log.c [ 25%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dckchb.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dckchb.c.o -MF CMakeFiles/cgcode.dir/dckchb.c.o.d -o CMakeFiles/cgcode.dir/dckchb.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dckchb.c [ 25%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_mod.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_mod.c.o -MF CMakeFiles/vf2c.dir/r_mod.c.o.d -o CMakeFiles/vf2c.dir/r_mod.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_mod.c [ 26%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgchk.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgchk.c.o -MF CMakeFiles/cgcode.dir/dcgchk.c.o.d -o CMakeFiles/cgcode.dir/dcgchk.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcgchk.c [ 26%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/donest.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/donest.c.o -MF CMakeFiles/cgcode.dir/donest.c.o.d -o CMakeFiles/cgcode.dir/donest.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/donest.c [ 26%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_nint.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_nint.c.o -MF CMakeFiles/vf2c.dir/r_nint.c.o.d -o CMakeFiles/vf2c.dir/r_nint.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_nint.c [ 26%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/mdstop.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/mdstop.c.o -MF CMakeFiles/cgcode.dir/mdstop.c.o.d -o CMakeFiles/cgcode.dir/mdstop.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/mdstop.c [ 26%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_sign.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_sign.c.o -MF CMakeFiles/vf2c.dir/r_sign.c.o.d -o CMakeFiles/vf2c.dir/r_sign.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_sign.c [ 27%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_sin.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_sin.c.o -MF CMakeFiles/vf2c.dir/r_sin.c.o.d -o CMakeFiles/vf2c.dir/r_sin.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_sin.c [ 28%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/d1mach.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/d1mach.c.o -MF CMakeFiles/cgcode.dir/d1mach.c.o.d -o CMakeFiles/cgcode.dir/d1mach.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/d1mach.c [ 28%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_sinh.c.o [ 28%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dratqr.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_sinh.c.o -MF CMakeFiles/vf2c.dir/r_sinh.c.o.d -o CMakeFiles/vf2c.dir/r_sinh.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_sinh.c cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dratqr.c.o -MF CMakeFiles/cgcode.dir/dratqr.c.o.d -o CMakeFiles/cgcode.dir/dratqr.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dratqr.c [ 28%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_sqrt.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_sqrt.c.o -MF CMakeFiles/vf2c.dir/r_sqrt.c.o.d -o CMakeFiles/vf2c.dir/r_sqrt.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_sqrt.c [ 29%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_tan.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_tan.c.o -MF CMakeFiles/vf2c.dir/r_tan.c.o.d -o CMakeFiles/vf2c.dir/r_tan.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_tan.c [ 29%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/depsln.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/x86_64-linux-gnu-gcc -Dcgcode_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/depsln.c.o -MF CMakeFiles/cgcode.dir/depsln.c.o.d -o CMakeFiles/cgcode.dir/depsln.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/depsln.c [ 29%] Linking C shared library libcgcode.so cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cmake -E cmake_link_script CMakeFiles/cgcode.dir/link.txt --verbose=1 [ 29%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_tanh.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc 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CMakeFiles/cgcode.dir/spcgnr.c.o CMakeFiles/cgcode.dir/spcgne.c.o CMakeFiles/cgcode.dir/sppcg.c.o CMakeFiles/cgcode.dir/spcgca.c.o CMakeFiles/cgcode.dir/sdpchb.c.o CMakeFiles/cgcode.dir/scbfix.c.o CMakeFiles/cgcode.dir/sckchb.c.o CMakeFiles/cgcode.dir/scgchk.c.o CMakeFiles/cgcode.dir/sonest.c.o CMakeFiles/cgcode.dir/msstop.c.o CMakeFiles/cgcode.dir/r1mach.c.o CMakeFiles/cgcode.dir/sratqr.c.o CMakeFiles/cgcode.dir/dcgdrv.c.o CMakeFiles/cgcode.dir/dcg.c.o CMakeFiles/cgcode.dir/dcr.c.o CMakeFiles/cgcode.dir/dcrind.c.o CMakeFiles/cgcode.dir/dpcg.c.o CMakeFiles/cgcode.dir/dcgnr.c.o CMakeFiles/cgcode.dir/dcgne.c.o CMakeFiles/cgcode.dir/dpcgnr.c.o CMakeFiles/cgcode.dir/dpcgne.c.o CMakeFiles/cgcode.dir/dppcg.c.o CMakeFiles/cgcode.dir/dpcgca.c.o CMakeFiles/cgcode.dir/ddpchb.c.o CMakeFiles/cgcode.dir/dcbfix.c.o CMakeFiles/cgcode.dir/dckchb.c.o CMakeFiles/cgcode.dir/dcgchk.c.o CMakeFiles/cgcode.dir/donest.c.o CMakeFiles/cgcode.dir/mdstop.c.o CMakeFiles/cgcode.dir/d1mach.c.o CMakeFiles/cgcode.dir/dratqr.c.o CMakeFiles/cgcode.dir/depsln.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cmake -E cmake_symlink_library libcgcode.so.1.9.3 libcgcode.so.1.9 libcgcode.so make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 29%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_abs.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_abs.c.o -MF CMakeFiles/vf2c.dir/d_abs.c.o.d -o CMakeFiles/vf2c.dir/d_abs.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_abs.c [ 29%] Built target cgcode make -f _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/build.make _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/DependInfo.cmake "--color=" gamer make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make -f _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/build.make _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/build make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 30%] Building C object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/base/gamer_base.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/x86_64-linux-gnu-gcc -Dgamer_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/base/gamer_base.c.o -MF CMakeFiles/gamer.dir/base/gamer_base.c.o.d -o CMakeFiles/gamer.dir/base/gamer_base.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base/gamer_base.c [ 30%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_acos.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_acos.c.o -MF CMakeFiles/vf2c.dir/d_acos.c.o.d -o CMakeFiles/vf2c.dir/d_acos.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_acos.c [ 30%] Building C object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/triangle/triangle.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/x86_64-linux-gnu-gcc -Dgamer_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/triangle/triangle.c.o -MF CMakeFiles/gamer.dir/triangle/triangle.c.o.d -o CMakeFiles/gamer.dir/triangle/triangle.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle/triangle.c [ 31%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_asin.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_asin.c.o -MF CMakeFiles/vf2c.dir/d_asin.c.o.d -o CMakeFiles/vf2c.dir/d_asin.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_asin.c [ 31%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_atan.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_atan.c.o -MF CMakeFiles/vf2c.dir/d_atan.c.o.d -o CMakeFiles/vf2c.dir/d_atan.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_atan.c [ 31%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_atn2.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_atn2.c.o -MF CMakeFiles/vf2c.dir/d_atn2.c.o.d -o CMakeFiles/vf2c.dir/d_atn2.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_atn2.c [ 31%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_cnjg.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_cnjg.c.o -MF CMakeFiles/vf2c.dir/d_cnjg.c.o.d -o CMakeFiles/vf2c.dir/d_cnjg.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_cnjg.c [ 32%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_cos.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_cos.c.o -MF CMakeFiles/vf2c.dir/d_cos.c.o.d -o CMakeFiles/vf2c.dir/d_cos.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_cos.c [ 32%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_cosh.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_cosh.c.o -MF CMakeFiles/vf2c.dir/d_cosh.c.o.d -o CMakeFiles/vf2c.dir/d_cosh.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_cosh.c [ 32%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_dim.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_dim.c.o -MF CMakeFiles/vf2c.dir/d_dim.c.o.d -o CMakeFiles/vf2c.dir/d_dim.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_dim.c [ 33%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_exp.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_exp.c.o -MF CMakeFiles/vf2c.dir/d_exp.c.o.d -o CMakeFiles/vf2c.dir/d_exp.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_exp.c [ 33%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_imag.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_imag.c.o -MF CMakeFiles/vf2c.dir/d_imag.c.o.d -o CMakeFiles/vf2c.dir/d_imag.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_imag.c [ 33%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_int.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_int.c.o -MF CMakeFiles/vf2c.dir/d_int.c.o.d -o CMakeFiles/vf2c.dir/d_int.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_int.c [ 33%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_lg10.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_lg10.c.o -MF CMakeFiles/vf2c.dir/d_lg10.c.o.d -o CMakeFiles/vf2c.dir/d_lg10.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_lg10.c [ 34%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_log.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_log.c.o -MF CMakeFiles/vf2c.dir/d_log.c.o.d -o CMakeFiles/vf2c.dir/d_log.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_log.c [ 34%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_mod.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_mod.c.o -MF CMakeFiles/vf2c.dir/d_mod.c.o.d -o CMakeFiles/vf2c.dir/d_mod.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_mod.c [ 34%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_nint.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_nint.c.o -MF CMakeFiles/vf2c.dir/d_nint.c.o.d -o CMakeFiles/vf2c.dir/d_nint.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_nint.c [ 35%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_prod.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_prod.c.o -MF CMakeFiles/vf2c.dir/d_prod.c.o.d -o CMakeFiles/vf2c.dir/d_prod.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_prod.c [ 35%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_sign.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_sign.c.o -MF CMakeFiles/vf2c.dir/d_sign.c.o.d -o CMakeFiles/vf2c.dir/d_sign.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_sign.c [ 35%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_sin.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_sin.c.o -MF CMakeFiles/vf2c.dir/d_sin.c.o.d -o CMakeFiles/vf2c.dir/d_sin.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_sin.c [ 35%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_sinh.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_sinh.c.o -MF CMakeFiles/vf2c.dir/d_sinh.c.o.d -o CMakeFiles/vf2c.dir/d_sinh.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_sinh.c [ 36%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_sqrt.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_sqrt.c.o -MF CMakeFiles/vf2c.dir/d_sqrt.c.o.d -o CMakeFiles/vf2c.dir/d_sqrt.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_sqrt.c [ 36%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_tan.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_tan.c.o -MF CMakeFiles/vf2c.dir/d_tan.c.o.d -o CMakeFiles/vf2c.dir/d_tan.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_tan.c [ 36%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_tanh.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_tanh.c.o -MF CMakeFiles/vf2c.dir/d_tanh.c.o.d -o CMakeFiles/vf2c.dir/d_tanh.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_tanh.c [ 37%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_abs.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_abs.c.o -MF CMakeFiles/vf2c.dir/i_abs.c.o.d -o CMakeFiles/vf2c.dir/i_abs.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/i_abs.c [ 37%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_dim.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_dim.c.o -MF CMakeFiles/vf2c.dir/i_dim.c.o.d -o CMakeFiles/vf2c.dir/i_dim.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/i_dim.c [ 37%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_dnnt.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_dnnt.c.o -MF CMakeFiles/vf2c.dir/i_dnnt.c.o.d -o CMakeFiles/vf2c.dir/i_dnnt.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/i_dnnt.c [ 37%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_indx.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_indx.c.o -MF CMakeFiles/vf2c.dir/i_indx.c.o.d -o CMakeFiles/vf2c.dir/i_indx.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/i_indx.c [ 38%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_len.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_len.c.o -MF CMakeFiles/vf2c.dir/i_len.c.o.d -o CMakeFiles/vf2c.dir/i_len.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/i_len.c [ 38%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_mod.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_mod.c.o -MF CMakeFiles/vf2c.dir/i_mod.c.o.d -o CMakeFiles/vf2c.dir/i_mod.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/i_mod.c [ 38%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_nint.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_nint.c.o -MF CMakeFiles/vf2c.dir/i_nint.c.o.d -o CMakeFiles/vf2c.dir/i_nint.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/i_nint.c [ 39%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_sign.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_sign.c.o -MF CMakeFiles/vf2c.dir/i_sign.c.o.d -o CMakeFiles/vf2c.dir/i_sign.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/i_sign.c [ 39%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/lbitbits.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/lbitbits.c.o -MF CMakeFiles/vf2c.dir/lbitbits.c.o.d -o CMakeFiles/vf2c.dir/lbitbits.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/lbitbits.c [ 39%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/lbitshft.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/lbitshft.c.o -MF CMakeFiles/vf2c.dir/lbitshft.c.o.d -o CMakeFiles/vf2c.dir/lbitshft.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/lbitshft.c [ 39%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_abs.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_abs.c.o -MF CMakeFiles/vf2c.dir/h_abs.c.o.d -o CMakeFiles/vf2c.dir/h_abs.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/h_abs.c [ 40%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_dim.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_dim.c.o -MF CMakeFiles/vf2c.dir/h_dim.c.o.d -o CMakeFiles/vf2c.dir/h_dim.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/h_dim.c [ 40%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_dnnt.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_dnnt.c.o -MF CMakeFiles/vf2c.dir/h_dnnt.c.o.d -o CMakeFiles/vf2c.dir/h_dnnt.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/h_dnnt.c [ 40%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_indx.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_indx.c.o -MF CMakeFiles/vf2c.dir/h_indx.c.o.d -o CMakeFiles/vf2c.dir/h_indx.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/h_indx.c [ 41%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_len.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_len.c.o -MF CMakeFiles/vf2c.dir/h_len.c.o.d -o CMakeFiles/vf2c.dir/h_len.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/h_len.c [ 41%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_mod.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_mod.c.o -MF CMakeFiles/vf2c.dir/h_mod.c.o.d -o CMakeFiles/vf2c.dir/h_mod.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/h_mod.c [ 41%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_nint.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_nint.c.o -MF CMakeFiles/vf2c.dir/h_nint.c.o.d -o CMakeFiles/vf2c.dir/h_nint.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/h_nint.c [ 41%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_sign.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_sign.c.o -MF CMakeFiles/vf2c.dir/h_sign.c.o.d -o CMakeFiles/vf2c.dir/h_sign.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/h_sign.c [ 42%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_ge.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_ge.c.o -MF CMakeFiles/vf2c.dir/l_ge.c.o.d -o CMakeFiles/vf2c.dir/l_ge.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/l_ge.c [ 42%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_gt.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_gt.c.o -MF CMakeFiles/vf2c.dir/l_gt.c.o.d -o CMakeFiles/vf2c.dir/l_gt.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/l_gt.c [ 42%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_le.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_le.c.o -MF CMakeFiles/vf2c.dir/l_le.c.o.d -o CMakeFiles/vf2c.dir/l_le.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/l_le.c [ 43%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_lt.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_lt.c.o -MF CMakeFiles/vf2c.dir/l_lt.c.o.d -o CMakeFiles/vf2c.dir/l_lt.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/l_lt.c [ 43%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_ge.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_ge.c.o -MF CMakeFiles/vf2c.dir/hl_ge.c.o.d -o CMakeFiles/vf2c.dir/hl_ge.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/hl_ge.c [ 43%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_gt.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_gt.c.o -MF CMakeFiles/vf2c.dir/hl_gt.c.o.d -o CMakeFiles/vf2c.dir/hl_gt.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/hl_gt.c [ 43%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_le.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_le.c.o -MF CMakeFiles/vf2c.dir/hl_le.c.o.d -o CMakeFiles/vf2c.dir/hl_le.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/hl_le.c [ 44%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_lt.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_lt.c.o -MF CMakeFiles/vf2c.dir/hl_lt.c.o.d -o CMakeFiles/vf2c.dir/hl_lt.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/hl_lt.c [ 44%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ef1asc_.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ef1asc_.c.o -MF CMakeFiles/vf2c.dir/ef1asc_.c.o.d -o CMakeFiles/vf2c.dir/ef1asc_.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/ef1asc_.c [ 44%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ef1cmc_.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ef1cmc_.c.o -MF CMakeFiles/vf2c.dir/ef1cmc_.c.o.d -o CMakeFiles/vf2c.dir/ef1cmc_.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/ef1cmc_.c [ 44%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/f77_aloc.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/f77_aloc.c.o -MF CMakeFiles/vf2c.dir/f77_aloc.c.o.d -o CMakeFiles/vf2c.dir/f77_aloc.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/f77_aloc.c [ 45%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_cat.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_cat.c.o -MF CMakeFiles/vf2c.dir/s_cat.c.o.d -o CMakeFiles/vf2c.dir/s_cat.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/s_cat.c [ 45%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_cmp.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_cmp.c.o -MF CMakeFiles/vf2c.dir/s_cmp.c.o.d -o CMakeFiles/vf2c.dir/s_cmp.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/s_cmp.c [ 45%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_copy.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_copy.c.o -MF CMakeFiles/vf2c.dir/s_copy.c.o.d -o CMakeFiles/vf2c.dir/s_copy.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/s_copy.c [ 46%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/dtime_.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/dtime_.c.o -MF CMakeFiles/vf2c.dir/dtime_.c.o.d -o CMakeFiles/vf2c.dir/dtime_.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/dtime_.c [ 46%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/etime_.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/etime_.c.o -MF CMakeFiles/vf2c.dir/etime_.c.o.d -o CMakeFiles/vf2c.dir/etime_.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/etime_.c [ 46%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/backspac.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/backspac.c.o -MF CMakeFiles/vf2c.dir/backspac.c.o.d -o CMakeFiles/vf2c.dir/backspac.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/backspac.c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/backspac.c: In function ‘f_back’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/backspac.c:47:17: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 47 | fread((char *)&n,sizeof(uiolen),1,f); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 46%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/close.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/close.c.o -MF CMakeFiles/vf2c.dir/close.c.o.d -o CMakeFiles/vf2c.dir/close.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/close.c [ 47%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/dfe.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/dfe.c.o -MF CMakeFiles/vf2c.dir/dfe.c.o.d -o CMakeFiles/vf2c.dir/dfe.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/dfe.c [ 47%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/dolio.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/dolio.c.o -MF CMakeFiles/vf2c.dir/dolio.c.o.d -o CMakeFiles/vf2c.dir/dolio.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/dolio.c [ 47%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/due.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/due.c.o -MF CMakeFiles/vf2c.dir/due.c.o.d -o CMakeFiles/vf2c.dir/due.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/due.c [ 48%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/endfile.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/endfile.c.o -MF CMakeFiles/vf2c.dir/endfile.c.o.d -o CMakeFiles/vf2c.dir/endfile.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/endfile.c [ 48%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/err.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/err.c.o -MF CMakeFiles/vf2c.dir/err.c.o.d -o CMakeFiles/vf2c.dir/err.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/err.c [ 48%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/tetgen/predicates.cpp.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/x86_64-linux-gnu-g++ -Dgamer_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/tetgen/predicates.cpp.o -MF CMakeFiles/gamer.dir/tetgen/predicates.cpp.o.d -o CMakeFiles/gamer.dir/tetgen/predicates.cpp.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/predicates.cpp [ 48%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/fmt.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/fmt.c.o -MF CMakeFiles/vf2c.dir/fmt.c.o.d -o CMakeFiles/vf2c.dir/fmt.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/fmt.c [ 48%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/fmtlib.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/fmtlib.c.o -MF CMakeFiles/vf2c.dir/fmtlib.c.o.d -o CMakeFiles/vf2c.dir/fmtlib.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/fmtlib.c [ 49%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ftell_.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ftell_.c.o -MF CMakeFiles/vf2c.dir/ftell_.c.o.d -o CMakeFiles/vf2c.dir/ftell_.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/ftell_.c [ 49%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/iio.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/iio.c.o -MF CMakeFiles/vf2c.dir/iio.c.o.d -o CMakeFiles/vf2c.dir/iio.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/iio.c [ 49%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ilnw.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ilnw.c.o -MF CMakeFiles/vf2c.dir/ilnw.c.o.d -o CMakeFiles/vf2c.dir/ilnw.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/ilnw.c [ 50%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/inquire.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/inquire.c.o -MF CMakeFiles/vf2c.dir/inquire.c.o.d -o CMakeFiles/vf2c.dir/inquire.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/inquire.c [ 50%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/lread.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/lread.c.o -MF CMakeFiles/vf2c.dir/lread.c.o.d -o CMakeFiles/vf2c.dir/lread.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/lread.c [ 50%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/lwrite.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD 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51%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/rsfe.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/rsfe.c.o -MF CMakeFiles/vf2c.dir/rsfe.c.o.d -o CMakeFiles/vf2c.dir/rsfe.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/rsfe.c [ 52%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/rsli.c.o cd 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/usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/rsne.c.o -MF CMakeFiles/vf2c.dir/rsne.c.o.d -o CMakeFiles/vf2c.dir/rsne.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/rsne.c [ 52%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/sfe.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/sfe.c.o -MF CMakeFiles/vf2c.dir/sfe.c.o.d -o CMakeFiles/vf2c.dir/sfe.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/sfe.c [ 52%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/sue.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c 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-Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/typesize.c.o -MF CMakeFiles/vf2c.dir/typesize.c.o.d -o CMakeFiles/vf2c.dir/typesize.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/typesize.c [ 53%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/uio.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/uio.c.o -MF CMakeFiles/vf2c.dir/uio.c.o.d -o CMakeFiles/vf2c.dir/uio.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/uio.c [ 53%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/util.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/util.c.o -MF CMakeFiles/vf2c.dir/util.c.o.d -o CMakeFiles/vf2c.dir/util.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/util.c [ 54%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/wref.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/wref.c.o -MF CMakeFiles/vf2c.dir/wref.c.o.d -o CMakeFiles/vf2c.dir/wref.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/wref.c [ 54%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/wrtfmt.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/wrtfmt.c.o -MF CMakeFiles/vf2c.dir/wrtfmt.c.o.d -o CMakeFiles/vf2c.dir/wrtfmt.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/wrtfmt.c [ 54%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/tetgen/tetgen.cpp.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/x86_64-linux-gnu-g++ -Dgamer_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/tetgen/tetgen.cpp.o -MF CMakeFiles/gamer.dir/tetgen/tetgen.cpp.o.d -o CMakeFiles/gamer.dir/tetgen/tetgen.cpp.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp [ 54%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/wsfe.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/wsfe.c.o -MF CMakeFiles/vf2c.dir/wsfe.c.o.d -o CMakeFiles/vf2c.dir/wsfe.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/wsfe.c [ 54%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/wsle.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/x86_64-linux-gnu-gcc -Dvf2c_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT 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Linking C shared library libvf2c.so cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cmake -E cmake_link_script CMakeFiles/vf2c.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -shared -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--dependency-file=CMakeFiles/vf2c.dir/link.d -Wl,-soname,libvf2c.so.1.9 -o libvf2c.so.1.9.3 CMakeFiles/vf2c.dir/f77vers.c.o CMakeFiles/vf2c.dir/i77vers.c.o CMakeFiles/vf2c.dir/s_rnge.c.o CMakeFiles/vf2c.dir/abort_.c.o CMakeFiles/vf2c.dir/exit_.c.o CMakeFiles/vf2c.dir/getarg_.c.o CMakeFiles/vf2c.dir/iargc_.c.o CMakeFiles/vf2c.dir/getenv_.c.o CMakeFiles/vf2c.dir/signal_.c.o 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CMakeFiles/vf2c.dir/l_gt.c.o CMakeFiles/vf2c.dir/l_le.c.o CMakeFiles/vf2c.dir/l_lt.c.o CMakeFiles/vf2c.dir/hl_ge.c.o CMakeFiles/vf2c.dir/hl_gt.c.o CMakeFiles/vf2c.dir/hl_le.c.o CMakeFiles/vf2c.dir/hl_lt.c.o CMakeFiles/vf2c.dir/ef1asc_.c.o CMakeFiles/vf2c.dir/ef1cmc_.c.o CMakeFiles/vf2c.dir/f77_aloc.c.o CMakeFiles/vf2c.dir/s_cat.c.o CMakeFiles/vf2c.dir/s_cmp.c.o CMakeFiles/vf2c.dir/s_copy.c.o CMakeFiles/vf2c.dir/dtime_.c.o CMakeFiles/vf2c.dir/etime_.c.o CMakeFiles/vf2c.dir/backspac.c.o CMakeFiles/vf2c.dir/close.c.o CMakeFiles/vf2c.dir/dfe.c.o CMakeFiles/vf2c.dir/dolio.c.o CMakeFiles/vf2c.dir/due.c.o CMakeFiles/vf2c.dir/endfile.c.o CMakeFiles/vf2c.dir/err.c.o CMakeFiles/vf2c.dir/fmt.c.o CMakeFiles/vf2c.dir/fmtlib.c.o CMakeFiles/vf2c.dir/ftell_.c.o CMakeFiles/vf2c.dir/iio.c.o CMakeFiles/vf2c.dir/ilnw.c.o CMakeFiles/vf2c.dir/inquire.c.o CMakeFiles/vf2c.dir/lread.c.o CMakeFiles/vf2c.dir/lwrite.c.o CMakeFiles/vf2c.dir/open.c.o CMakeFiles/vf2c.dir/rdfmt.c.o CMakeFiles/vf2c.dir/rewind.c.o CMakeFiles/vf2c.dir/rsfe.c.o CMakeFiles/vf2c.dir/rsli.c.o CMakeFiles/vf2c.dir/rsne.c.o CMakeFiles/vf2c.dir/sfe.c.o CMakeFiles/vf2c.dir/sue.c.o CMakeFiles/vf2c.dir/typesize.c.o CMakeFiles/vf2c.dir/uio.c.o CMakeFiles/vf2c.dir/util.c.o CMakeFiles/vf2c.dir/wref.c.o CMakeFiles/vf2c.dir/wrtfmt.c.o CMakeFiles/vf2c.dir/wsfe.c.o CMakeFiles/vf2c.dir/wsle.c.o CMakeFiles/vf2c.dir/wsne.c.o CMakeFiles/vf2c.dir/xwsne.c.o CMakeFiles/vf2c.dir/main.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cmake -E cmake_symlink_library libvf2c.so.1.9.3 libvf2c.so.1.9 libvf2c.so make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 56%] Built target vf2c make -f tools/python/CMakeFiles/apbslib_swig_compilation.dir/build.make tools/python/CMakeFiles/apbslib_swig_compilation.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/tools/python /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/DependInfo.cmake "--color=" apbslib_swig_compilation Dependee "/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/DependInfo.cmake" is newer than depender "/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/depend.internal". Dependee "/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/depend.internal". Scanning dependencies of target apbslib_swig_compilation make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make -f tools/python/CMakeFiles/apbslib_swig_compilation.dir/build.make tools/python/CMakeFiles/apbslib_swig_compilation.dir/build make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 56%] Swig compile apbslib.i for python cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python && /usr/bin/cmake -E make_directory /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp: In member function ‘void tetgenmesh::constrainedfacets()’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp:20804:26: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 20804 | equatptlist = new list("point *"); | ^~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp:20809:26: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 20809 | horizptlist = new list("point *"); | ^~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp:20810:26: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 20810 | belowptlist = new list("point *"); | ^~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp:20811:26: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 20811 | aboveptlist = new list("point *"); | ^~~~~~~~~ cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python && /usr/bin/cmake -E touch /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON.stamp cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python && /usr/bin/cmake -E env SWIG_LIB=/usr/share/swig/4.5.1 /usr/bin/swig -python -outdir /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python -interface _apbslib -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/python3.14 -I/build/apbs-56d3Iv/apbs-3.4.1/tools/python -o /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c /build/apbs-56d3Iv/apbs-3.4.1/tools/python/apbslib.i /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp: In member function ‘long int tetgenmesh::reconstructmesh()’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp:24383:25: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 24383 | markerlist = new list("int"); | ^~~~~ make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 56%] Built target apbslib_swig_compilation make -f _deps/fetk-build/punc/src/CMakeFiles/punc.dir/build.make _deps/fetk-build/punc/src/CMakeFiles/punc.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src/CMakeFiles/punc.dir/DependInfo.cmake "--color=" punc make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make -f _deps/fetk-build/punc/src/CMakeFiles/punc.dir/build.make _deps/fetk-build/punc/src/CMakeFiles/punc.dir/build make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 56%] Building C object _deps/fetk-build/punc/src/CMakeFiles/punc.dir/base/punc_base.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src && /usr/bin/x86_64-linux-gnu-gcc -Dpunc_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/CMakeFiles/punc.dir/base/punc_base.c.o -MF CMakeFiles/punc.dir/base/punc_base.c.o.d -o CMakeFiles/punc.dir/base/punc_base.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base/punc_base.c [ 56%] Linking C shared library libpunc.so cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/punc.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -shared -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--dependency-file=CMakeFiles/punc.dir/link.d -Wl,-soname,libpunc.so.1.9 -o libpunc.so.1.9.3 CMakeFiles/punc.dir/base/punc_base.c.o -lmaloc /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so vf2c/libvf2c.so.1.9.3 cgcode/libcgcode.so.1.9.3 cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src && /usr/bin/cmake -E cmake_symlink_library libpunc.so.1.9.3 libpunc.so.1.9 libpunc.so make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 56%] Built target punc make -f _deps/fetk-build/mc/src/CMakeFiles/mc.dir/build.make _deps/fetk-build/mc/src/CMakeFiles/mc.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src/CMakeFiles/mc.dir/DependInfo.cmake "--color=" mc make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make -f _deps/fetk-build/mc/src/CMakeFiles/mc.dir/build.make _deps/fetk-build/mc/src/CMakeFiles/mc.dir/build make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 57%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/base/mc_base.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/base/mc_base.c.o -MF CMakeFiles/mc.dir/base/mc_base.c.o.d -o CMakeFiles/mc.dir/base/mc_base.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base/mc_base.c [ 57%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/bmat.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/bmat.c.o -MF CMakeFiles/mc.dir/bam/bmat.c.o.d -o CMakeFiles/mc.dir/bam/bmat.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c: In function ‘Bmat_galerkin’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c:1018:36: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size between 5 and 14 [-Wformat-overflow=] 1018 | sprintf(bname, "%s_%d%d", thee->name, p, q); | ^~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c:1018:32: note: directive argument in the range [0, 2147483646] 1018 | sprintf(bname, "%s_%d%d", thee->name, p, q); | ^~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c:1018:32: note: directive argument in the range [0, 2147483646] In file included from /usr/include/stdio.h:974, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base/mc/mc_base.h:40, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/mc/bmat.h:121, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat_p.h:37, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c:34: In function ‘sprintf’, inlined from ‘Bmat_galerkin’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c:1018:17: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 4 and 31 bytes into a destination of size 15 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 57%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/bsolv.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/bsolv.c.o -MF CMakeFiles/mc.dir/bam/bsolv.c.o.d -o CMakeFiles/mc.dir/bam/bsolv.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c: In function ‘Bvec_bcg’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c:922:29: warning: ‘%s’ directive writing up to 79 bytes into a region of size 72 [-Wformat-overflow=] 922 | sprintf(rn,"Bvec_bcg%s",rmeth); | ^~ ~~~~~ In file included from /usr/include/stdio.h:974, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base/mc/mc_base.h:40, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/mc/bvec.h:41, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bvec_p.h:37, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c:34: In function ‘sprintf’, inlined from ‘Bvec_bcg’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c:922:9: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 9 and 88 bytes into a destination of size 80 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c: In function ‘Bvec_bcg’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c:919:33: warning: ‘%s’ directive writing up to 79 bytes into a region of size 68 [-Wformat-overflow=] 919 | sprintf(rn,"--->Bvec_bcg%s",rmeth); | ^~ ~~~~~ In function ‘sprintf’, inlined from ‘Bvec_bcg’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c:919:9: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 13 and 92 bytes into a destination of size 80 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c: In function ‘Bvec_cg’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c:631:28: warning: ‘%s’ directive writing up to 79 bytes into a region of size 73 [-Wformat-overflow=] 631 | sprintf(rn,"Bvec_cg%s",rmeth); | ^~ ~~~~~ In function ‘sprintf’, inlined from ‘Bvec_cg’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c:631:9: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 8 and 87 bytes into a destination of size 80 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c: In function ‘Bvec_cg’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c:628:32: warning: ‘%s’ directive writing up to 79 bytes into a region of size 69 [-Wformat-overflow=] 628 | sprintf(rn,"--->Bvec_cg%s",rmeth); | ^~ ~~~~~ In function ‘sprintf’, inlined from ‘Bvec_cg’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c:628:9: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 12 and 91 bytes into a destination of size 80 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c: In function ‘Bvec_cgnr’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c:1422:30: warning: ‘%s’ directive writing up to 79 bytes into a region of size 71 [-Wformat-overflow=] 1422 | sprintf(rn,"Bvec_cgnr%s",rmeth); | ^~ ~~~~~ In function ‘sprintf’, inlined from ‘Bvec_cgnr’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c:1422:9: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 10 and 89 bytes into a destination of size 80 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c: In function ‘Bvec_cgnr’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c:1419:34: warning: ‘%s’ directive writing up to 79 bytes into a region of size 67 [-Wformat-overflow=] 1419 | sprintf(rn,"--->Bvec_cgnr%s",rmeth); | ^~ ~~~~~ In function ‘sprintf’, inlined from ‘Bvec_cgnr’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c:1419:9: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 14 and 93 bytes into a destination of size 80 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 57%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/bvec.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/bvec.c.o -MF CMakeFiles/mc.dir/bam/bvec.c.o.d -o CMakeFiles/mc.dir/bam/bvec.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bvec.c [ 58%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/mat.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/mat.c.o -MF CMakeFiles/mc.dir/bam/mat.c.o.d -o CMakeFiles/mc.dir/bam/mat.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/mat.c [ 58%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/matcopy.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/matcopy.c.o -MF CMakeFiles/mc.dir/bam/matcopy.c.o.d -o CMakeFiles/mc.dir/bam/matcopy.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/matcopy.c [ 58%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/matln.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/matln.c.o -MF CMakeFiles/mc.dir/bam/matln.c.o.d -o CMakeFiles/mc.dir/bam/matln.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/matln.c [ 59%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/mtool.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/mtool.c.o -MF CMakeFiles/mc.dir/bam/mtool.c.o.d -o CMakeFiles/mc.dir/bam/mtool.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/mtool.c [ 59%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/slu.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/slu.c.o -MF CMakeFiles/mc.dir/bam/slu.c.o.d -o CMakeFiles/mc.dir/bam/slu.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/slu.c [ 59%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/vec.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/vec.c.o -MF CMakeFiles/mc.dir/bam/vec.c.o.d -o CMakeFiles/mc.dir/bam/vec.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/vec.c [ 59%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/vec3.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/vec3.c.o -MF CMakeFiles/mc.dir/bam/vec3.c.o.d -o CMakeFiles/mc.dir/bam/vec3.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/vec3.c [ 60%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/zslu.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/zslu.c.o -MF CMakeFiles/mc.dir/bam/zslu.c.o.d -o CMakeFiles/mc.dir/bam/zslu.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/zslu.c [ 60%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/whb.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/whb.c.o -MF CMakeFiles/mc.dir/whb/whb.c.o.d -o CMakeFiles/mc.dir/whb/whb.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/whb.c [ 60%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/bvechb.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/bvechb.c.o -MF CMakeFiles/mc.dir/whb/bvechb.c.o.d -o CMakeFiles/mc.dir/whb/bvechb.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb.c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb.c: In function ‘Bvec_hcg’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb.c:267:29: warning: ‘%s’ directive writing up to 79 bytes into a region of size 72 [-Wformat-overflow=] 267 | sprintf(rn,"Bvec_hcg%s",rmeth); | ^~ ~~~~~ In file included from /usr/include/stdio.h:974, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base/mc/mc_base.h:40, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/mc/whb.h:50, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb_p.h:37, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb.c:34: In function ‘sprintf’, inlined from ‘Bvec_hcg’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb.c:267:9: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 9 and 88 bytes into a destination of size 80 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb.c: In function ‘Bvec_hcg’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb.c:264:33: warning: ‘%s’ directive writing up to 79 bytes into a region of size 68 [-Wformat-overflow=] 264 | sprintf(rn,"--->Bvec_hcg%s",rmeth); | ^~ ~~~~~ In function ‘sprintf’, inlined from ‘Bvec_hcg’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb.c:264:9: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 13 and 92 bytes into a destination of size 80 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb.c: In function ‘Bvec_hbcg’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb.c:474:30: warning: ‘%s’ directive writing up to 79 bytes into a region of size 71 [-Wformat-overflow=] 474 | sprintf(rn,"Bvec_hbcg%s",rmeth); | ^~ ~~~~~ In function ‘sprintf’, inlined from ‘Bvec_hbcg’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb.c:474:9: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 10 and 89 bytes into a destination of size 80 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb.c: In function ‘Bvec_hbcg’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb.c:471:34: warning: ‘%s’ directive writing up to 79 bytes into a region of size 67 [-Wformat-overflow=] 471 | sprintf(rn,"--->Bvec_hbcg%s",rmeth); | ^~ ~~~~~ In function ‘sprintf’, inlined from ‘Bvec_hbcg’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb.c:471:9: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 14 and 93 bytes into a destination of size 80 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 61%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/hbtools.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/hbtools.c.o -MF CMakeFiles/mc.dir/whb/hbtools.c.o.d -o CMakeFiles/mc.dir/whb/hbtools.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools.c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools.c: In function ‘Bvec_ctorPoint’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools.c:291:28: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size between 5 and 14 [-Wformat-overflow=] 291 | sprintf(bname, "%s_%d", thee->name, p); | ^~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools.c:291:24: note: directive argument in the range [0, 2147483646] 291 | sprintf(bname, "%s_%d", thee->name, p); | ^~~~~~~ In file included from /usr/include/stdio.h:974, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base/mc/mc_base.h:40, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/mc/whb.h:50, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools_p.h:37, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools.c:34: In function ‘sprintf’, inlined from ‘Bvec_ctorPoint’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools.c:291:9: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 3 and 21 bytes into a destination of size 15 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 61%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/rcmat.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/rcmat.c.o -MF CMakeFiles/mc.dir/whb/rcmat.c.o.d -o CMakeFiles/mc.dir/whb/rcmat.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/rcmat.c [ 61%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/brcmat.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/brcmat.c.o -MF CMakeFiles/mc.dir/whb/brcmat.c.o.d -o CMakeFiles/mc.dir/whb/brcmat.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/brcmat.c [ 61%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/subopt.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/subopt.c.o -MF CMakeFiles/mc.dir/whb/subopt.c.o.d -o CMakeFiles/mc.dir/whb/subopt.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c: In function ‘Bvec_submethod’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c:495:31: warning: ‘%s’ directive writing up to 79 bytes into a region of size 70 [-Wformat-overflow=] 495 | sprintf(rn,"Bvec_sfpcg%s",rmeth); | ^~ ~~~~~ In file included from /usr/include/stdio.h:974, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base/mc/mc_base.h:40, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/mc/whb.h:50, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt_p.h:37, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c:39: In function ‘sprintf’, inlined from ‘Bvec_sfpcg’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c:495:9, inlined from ‘Bvec_submethod’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c:93:18: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 11 and 90 bytes into a destination of size 80 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c: In function ‘Bvec_submethod’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c:492:35: warning: ‘%s’ directive writing up to 79 bytes into a region of size 66 [-Wformat-overflow=] 492 | sprintf(rn,"--->Bvec_sfpcg%s",rmeth); | ^~ ~~~~~ In function ‘sprintf’, inlined from ‘Bvec_sfpcg’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c:492:9, inlined from ‘Bvec_submethod’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c:93:18: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 15 and 94 bytes into a destination of size 80 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c: In function ‘Bvec_submethod’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c:776:32: warning: ‘%s’ directive writing up to 79 bytes into a region of size 69 [-Wformat-overflow=] 776 | sprintf(rn,"Bvec_sfpbcg%s",rmeth); | ^~ ~~~~~ In function ‘sprintf’, inlined from ‘Bvec_sfpbcg’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c:776:9, inlined from ‘Bvec_submethod’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c:102:18: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 12 and 91 bytes into a destination of size 80 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c: In function ‘Bvec_submethod’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c:773:36: warning: ‘%s’ directive writing up to 79 bytes into a region of size 65 [-Wformat-overflow=] 773 | sprintf(rn,"--->Bvec_sfpbcg%s",rmeth); | ^~ ~~~~~ In function ‘sprintf’, inlined from ‘Bvec_sfpbcg’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c:773:9, inlined from ‘Bvec_submethod’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c:102:18: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 16 and 95 bytes into a destination of size 80 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 62%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/aprx.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/aprx.c.o -MF CMakeFiles/mc.dir/aprx/aprx.c.o.d -o CMakeFiles/mc.dir/aprx/aprx.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/aprx.c [ 62%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/assem.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/assem.c.o -MF CMakeFiles/mc.dir/aprx/assem.c.o.d -o CMakeFiles/mc.dir/aprx/assem.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/assem.c [ 62%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/bnode.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/bnode.c.o -MF CMakeFiles/mc.dir/aprx/bnode.c.o.d -o CMakeFiles/mc.dir/aprx/bnode.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/bnode.c [ 63%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/estim.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/estim.c.o -MF CMakeFiles/mc.dir/aprx/estim.c.o.d -o CMakeFiles/mc.dir/aprx/estim.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/estim.c [ 63%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/eval.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/eval.c.o -MF CMakeFiles/mc.dir/aprx/eval.c.o.d -o CMakeFiles/mc.dir/aprx/eval.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/eval.c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/eval.c: In function ‘Aprx_fe2fd’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/eval.c:368:40: warning: ‘__builtin___sprintf_chk’ writing a terminating nul past the end of the destination [-Wformat-overflow=] 368 | sprintf(filename, "f%dz.dat", block); | ^ In file included from /usr/include/stdio.h:974, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base/mc/mc_base.h:40, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/mc/aprx.h:40, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/aprx_p.h:37, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/eval.c:34: In function ‘sprintf’, inlined from ‘Aprx_fe2fd’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/eval.c:368:13: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 8 and 18 bytes into a destination of size 7 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/eval.c: In function ‘Aprx_fe2fd’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/eval.c:366:40: warning: ‘__builtin___sprintf_chk’ writing a terminating nul past the end of the destination [-Wformat-overflow=] 366 | sprintf(filename, "f%dy.dat", block); | ^ In function ‘sprintf’, inlined from ‘Aprx_fe2fd’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/eval.c:366:13: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 8 and 18 bytes into a destination of size 7 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/eval.c: In function ‘Aprx_fe2fd’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/eval.c:364:40: warning: ‘__builtin___sprintf_chk’ writing a terminating nul past the end of the destination [-Wformat-overflow=] 364 | sprintf(filename, "f%dx.dat", block); | ^ In function ‘sprintf’, inlined from ‘Aprx_fe2fd’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/eval.c:364:13: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 8 and 18 bytes into a destination of size 7 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 63%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/io.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/io.c.o -MF CMakeFiles/mc.dir/aprx/io.c.o.d -o CMakeFiles/mc.dir/aprx/io.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/io.c [ 63%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/node.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/node.c.o -MF CMakeFiles/mc.dir/aprx/node.c.o.d -o CMakeFiles/mc.dir/aprx/node.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/node.c [ 64%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/parti.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/parti.c.o -MF CMakeFiles/mc.dir/aprx/parti.c.o.d -o CMakeFiles/mc.dir/aprx/parti.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/parti.c [ 64%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/re.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/re.c.o -MF CMakeFiles/mc.dir/aprx/re.c.o.d -o CMakeFiles/mc.dir/aprx/re.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/re.c [ 64%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/vel.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/vel.c.o -MF CMakeFiles/mc.dir/gem/vel.c.o.d -o CMakeFiles/mc.dir/gem/vel.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/vel.c [ 65%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/ves.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/ves.c.o -MF CMakeFiles/mc.dir/gem/ves.c.o.d -o CMakeFiles/mc.dir/gem/ves.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/ves.c [ 65%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gem.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gem.c.o -MF CMakeFiles/mc.dir/gem/gem.c.o.d -o CMakeFiles/mc.dir/gem/gem.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gem.c [ 65%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemchk.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemchk.c.o -MF CMakeFiles/mc.dir/gem/gemchk.c.o.d -o CMakeFiles/mc.dir/gem/gemchk.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemchk.c [ 65%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemdisp.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemdisp.c.o -MF CMakeFiles/mc.dir/gem/gemdisp.c.o.d -o CMakeFiles/mc.dir/gem/gemdisp.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c [ 66%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/CorrectNormals.C.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/x86_64-linux-gnu-g++ -Dgamer_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/CorrectNormals.C.o -MF CMakeFiles/gamer.dir/biom/CorrectNormals.C.o.d -o CMakeFiles/gamer.dir/biom/CorrectNormals.C.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/CorrectNormals.C [ 66%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/GenerateSphereMesh.C.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/x86_64-linux-gnu-g++ -Dgamer_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/GenerateSphereMesh.C.o -MF CMakeFiles/gamer.dir/biom/GenerateSphereMesh.C.o.d -o CMakeFiles/gamer.dir/biom/GenerateSphereMesh.C.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/GenerateSphereMesh.C /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c: In function ‘Gem_writeTEC’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c:1656:33: warning: ‘__builtin___sprintf_chk’ writing a terminating nul past the end of the destination [-Wformat-overflow=] 1656 | sprintf(str1,"TETRAHEDRA"); | ^ In file included from /usr/include/stdio.h:974, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base/mc/mc_base.h:40, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/mc/gem.h:41, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gem_p.h:37, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c:34: In function ‘sprintf’, inlined from ‘Gem_writeTEC’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c:1656:9: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output 11 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c: In function ‘Gem_writeTEC’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c:1657:33: warning: ‘TETRAHEDRON’ directive writing 11 bytes into a region of size 10 [-Wformat-overflow=] 1657 | sprintf(str2,"TETRAHEDRON"); | ~~~~~~~~~~^ In function ‘sprintf’, inlined from ‘Gem_writeTEC’ at /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c:1657:9: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output 12 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 67%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemg.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemg.c.o -MF CMakeFiles/mc.dir/gem/gemg.c.o.d -o CMakeFiles/mc.dir/gem/gemg.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemg.c [ 67%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/MarchingCube.C.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/x86_64-linux-gnu-g++ -Dgamer_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/MarchingCube.C.o -MF CMakeFiles/gamer.dir/biom/MarchingCube.C.o.d -o CMakeFiles/gamer.dir/biom/MarchingCube.C.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/MarchingCube.C [ 67%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemgen.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemgen.c.o -MF CMakeFiles/mc.dir/gem/gemgen.c.o.d -o CMakeFiles/mc.dir/gem/gemgen.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemgen.c [ 68%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/PDB2Mesh.C.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/x86_64-linux-gnu-g++ -Dgamer_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/PDB2Mesh.C.o -MF CMakeFiles/gamer.dir/biom/PDB2Mesh.C.o.d -o CMakeFiles/gamer.dir/biom/PDB2Mesh.C.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/PDB2Mesh.C /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemgen.c: In function ‘Gem_delaunay’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemgen.c:522:5: warning: ‘Gem_writeGV’ accessing 32 bytes in a region of size 24 [-Wstringop-overflow=] 522 | Gem_writeGV(thee,sock,0,0,0,1.0,0,defX); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemgen.c:522:5: note: referencing argument 8 of type ‘double *[4]’ In file included from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gem_p.h:37, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemgen.c:34: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/mc/gem.h:3117:15: note: in a call to function ‘Gem_writeGV’ 3117 | VEXTERNC void Gem_writeGV(Gem *thee, Vio *sock, | ^~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemgen.c:659:13: warning: ‘Gem_writeGV’ accessing 32 bytes in a region of size 24 [-Wstringop-overflow=] 659 | Gem_writeGV(thee,sock,0,0,0,1.0,0,defX); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemgen.c:659:13: note: referencing argument 8 of type ‘double *[4]’ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/mc/gem.h:3117:15: note: in a call to function ‘Gem_writeGV’ 3117 | VEXTERNC void Gem_writeGV(Gem *thee, Vio *sock, | ^~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemgen.c:743:5: warning: ‘Gem_writeGV’ accessing 32 bytes in a region of size 24 [-Wstringop-overflow=] 743 | Gem_writeGV(thee,sock,0,0,0,1.0,0,defX); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemgen.c:743:5: note: referencing argument 8 of type ‘double *[4]’ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/mc/gem.h:3117:15: note: in a call to function ‘Gem_writeGV’ 3117 | VEXTERNC void Gem_writeGV(Gem *thee, Vio *sock, | ^~~~~~~~~~~ [ 68%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemio.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemio.c.o -MF CMakeFiles/mc.dir/gem/gemio.c.o.d -o CMakeFiles/mc.dir/gem/gemio.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemio.c [ 68%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/PDB2Volume.C.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/x86_64-linux-gnu-g++ -Dgamer_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/PDB2Volume.C.o -MF CMakeFiles/gamer.dir/biom/PDB2Volume.C.o.d -o CMakeFiles/gamer.dir/biom/PDB2Volume.C.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/PDB2Volume.C /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/PDB2Volume.C: In function ‘float PDB2Volume(char*, float**, int*, int*, int*, float*, float*, ATOM**, int*, char)’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/PDB2Volume.C:85:11: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 85 | fscanf(fp,"%d\n",&m); | ~~~~~~^~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/PDB2Volume.C:88:13: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 88 | fscanf(fp,"%f %f %f %f\n",&x,&y,&z,&radius); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/ReadLattice.C.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/x86_64-linux-gnu-g++ -Dgamer_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/ReadLattice.C.o -MF CMakeFiles/gamer.dir/biom/ReadLattice.C.o.d -o CMakeFiles/gamer.dir/biom/ReadLattice.C.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadLattice.C [ 69%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemref.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemref.c.o -MF CMakeFiles/mc.dir/gem/gemref.c.o.d -o CMakeFiles/mc.dir/gem/gemref.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemref.c [ 69%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/ReadPDB.C.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/x86_64-linux-gnu-g++ -Dgamer_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/ReadPDB.C.o -MF CMakeFiles/gamer.dir/biom/ReadPDB.C.o.d -o CMakeFiles/gamer.dir/biom/ReadPDB.C.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadPDB.C [ 69%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemunref.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemunref.c.o -MF CMakeFiles/mc.dir/gem/gemunref.c.o.d -o CMakeFiles/mc.dir/gem/gemunref.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemunref.c [ 69%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemcube.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemcube.c.o -MF CMakeFiles/mc.dir/gem/gemcube.c.o.d -o CMakeFiles/mc.dir/gem/gemcube.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemcube.c [ 70%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/ReadWriteMesh.C.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/x86_64-linux-gnu-g++ -Dgamer_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/ReadWriteMesh.C.o -MF CMakeFiles/gamer.dir/biom/ReadWriteMesh.C.o.d -o CMakeFiles/gamer.dir/biom/ReadWriteMesh.C.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C [ 70%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/pde/pde.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/pde/pde.c.o -MF CMakeFiles/mc.dir/pde/pde.c.o.d -o CMakeFiles/mc.dir/pde/pde.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde/pde.c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C: In function ‘SurfaceMesh* SurfaceMesh_readOFF(char*)’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:401:14: warning: too many arguments for format [-Wformat-extra-args] 401 | printf("Read error. Expected 3 integers for the first simplex.\n", n); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:494:14: warning: too many arguments for format [-Wformat-extra-args] 494 | printf("Read error. Expected 4 integers for the first simplex.\n", n); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C: In function ‘GemMesh* GemMesh_fromSurfaceMesh(SurfaceMesh*, char*)’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:754:17: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 754 | in.save_nodes("plc"); | ^~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:755:16: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 755 | in.save_poly("plc"); | ^~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:761:18: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 761 | out.save_nodes("result"); | ^~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:762:21: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 762 | out.save_elements("result"); | ^~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:763:18: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 763 | out.save_faces("result"); | ^~~~~~~~ [ 71%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/nam/am.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/nam/am.c.o -MF CMakeFiles/mc.dir/nam/am.c.o.d -o CMakeFiles/mc.dir/nam/am.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam/am.c [ 71%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/nam/lsolv.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/nam/lsolv.c.o -MF CMakeFiles/mc.dir/nam/lsolv.c.o.d -o CMakeFiles/mc.dir/nam/lsolv.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam/lsolv.c [ 71%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/nam/nsolv.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/nam/nsolv.c.o -MF CMakeFiles/mc.dir/nam/nsolv.c.o.d -o CMakeFiles/mc.dir/nam/nsolv.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam/nsolv.c [ 71%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/RegionGrowing.C.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/x86_64-linux-gnu-g++ -Dgamer_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/RegionGrowing.C.o -MF CMakeFiles/gamer.dir/biom/RegionGrowing.C.o.d -o CMakeFiles/gamer.dir/biom/RegionGrowing.C.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/RegionGrowing.C [ 72%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/dyn/dyn.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/dyn/dyn.c.o -MF CMakeFiles/mc.dir/dyn/dyn.c.o.d -o CMakeFiles/mc.dir/dyn/dyn.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn/dyn.c [ 72%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/dyn/svio.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/dyn/svio.c.o -MF CMakeFiles/mc.dir/dyn/svio.c.o.d -o CMakeFiles/mc.dir/dyn/svio.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn/svio.c [ 72%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/mcsh/mcsh.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/x86_64-linux-gnu-gcc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/mcsh/mcsh.c.o -MF CMakeFiles/mc.dir/mcsh/mcsh.c.o.d -o CMakeFiles/mc.dir/mcsh/mcsh.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh/mcsh.c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh/mcsh.c: In function ‘MCsh_builtIn’: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh/mcsh.c:765:9: warning: ‘Gem_writeGEOM’ accessing 32 bytes in a region of size 24 [-Wstringop-overflow=] 765 | Gem_writeGEOM(thee->gm, | ^~~~~~~~~~~~~~~~~~~~~~~ 766 | sock, | ~~~~~ 767 | defKey, | ~~~~~~~ 768 | Vsh_getenvInt(thee->vsh,"CKEY"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 | Vsh_getenvInt(thee->vsh,"DKEY"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 770 | Vsh_getenvReal(thee->vsh,"GVAL"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | Vsh_getenvInt(thee->vsh,"FKEY"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | defX, | ~~~~~ 773 | "GV"); | ~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh/mcsh.c:765:9: note: referencing argument 8 of type ‘double *[4]’ In file included from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/mc/aprx.h:42, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam/mc/am.h:43, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam/mc/nam.h:36, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh/mc/mcsh.h:42, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh/mcsh_p.h:37, from /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh/mcsh.c:34: /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/mc/gem.h:3036:15: note: in a call to function ‘Gem_writeGEOM’ 3036 | VEXTERNC void Gem_writeGEOM(Gem *thee, Vio *sock, | ^~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh/mcsh.c:810:9: warning: ‘Gem_writeGEOM’ accessing 32 bytes in a region of size 24 [-Wstringop-overflow=] 810 | Gem_writeGEOM(thee->gm, | ^~~~~~~~~~~~~~~~~~~~~~~ 811 | sock, | ~~~~~ 812 | defKey, | ~~~~~~~ 813 | Vsh_getenvInt(thee->vsh,"CKEY"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 | Vsh_getenvInt(thee->vsh,"DKEY"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 | Vsh_getenvReal(thee->vsh,"GVAL"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 | Vsh_getenvInt(thee->vsh,"FKEY"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 | defX, | ~~~~~ 818 | "MATH"); | ~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh/mcsh.c:810:9: note: referencing argument 8 of type ‘double *[4]’ /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/mc/gem.h:3036:15: note: in a call to function ‘Gem_writeGEOM’ 3036 | VEXTERNC void Gem_writeGEOM(Gem *thee, Vio *sock, | ^~~~~~~~~~~~~ [ 72%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfaceMesh.C.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/x86_64-linux-gnu-g++ -Dgamer_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfaceMesh.C.o -MF CMakeFiles/gamer.dir/biom/SurfaceMesh.C.o.d -o CMakeFiles/gamer.dir/biom/SurfaceMesh.C.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/SurfaceMesh.C [ 72%] Linking C shared library libmc.so cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/mc.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -shared -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--dependency-file=CMakeFiles/mc.dir/link.d -Wl,-soname,libmc.so.1.9 -o libmc.so.1.9.3 CMakeFiles/mc.dir/base/mc_base.c.o CMakeFiles/mc.dir/bam/bmat.c.o CMakeFiles/mc.dir/bam/bsolv.c.o CMakeFiles/mc.dir/bam/bvec.c.o CMakeFiles/mc.dir/bam/mat.c.o CMakeFiles/mc.dir/bam/matcopy.c.o CMakeFiles/mc.dir/bam/matln.c.o CMakeFiles/mc.dir/bam/mtool.c.o CMakeFiles/mc.dir/bam/slu.c.o CMakeFiles/mc.dir/bam/vec.c.o CMakeFiles/mc.dir/bam/vec3.c.o CMakeFiles/mc.dir/bam/zslu.c.o CMakeFiles/mc.dir/whb/whb.c.o CMakeFiles/mc.dir/whb/bvechb.c.o CMakeFiles/mc.dir/whb/hbtools.c.o CMakeFiles/mc.dir/whb/rcmat.c.o CMakeFiles/mc.dir/whb/brcmat.c.o CMakeFiles/mc.dir/whb/subopt.c.o CMakeFiles/mc.dir/aprx/aprx.c.o CMakeFiles/mc.dir/aprx/assem.c.o CMakeFiles/mc.dir/aprx/bnode.c.o CMakeFiles/mc.dir/aprx/estim.c.o CMakeFiles/mc.dir/aprx/eval.c.o CMakeFiles/mc.dir/aprx/io.c.o CMakeFiles/mc.dir/aprx/node.c.o CMakeFiles/mc.dir/aprx/parti.c.o CMakeFiles/mc.dir/aprx/re.c.o CMakeFiles/mc.dir/gem/vel.c.o CMakeFiles/mc.dir/gem/ves.c.o CMakeFiles/mc.dir/gem/gem.c.o CMakeFiles/mc.dir/gem/gemchk.c.o CMakeFiles/mc.dir/gem/gemdisp.c.o CMakeFiles/mc.dir/gem/gemg.c.o CMakeFiles/mc.dir/gem/gemgen.c.o CMakeFiles/mc.dir/gem/gemio.c.o CMakeFiles/mc.dir/gem/gemref.c.o CMakeFiles/mc.dir/gem/gemunref.c.o CMakeFiles/mc.dir/gem/gemcube.c.o CMakeFiles/mc.dir/pde/pde.c.o CMakeFiles/mc.dir/nam/am.c.o CMakeFiles/mc.dir/nam/lsolv.c.o CMakeFiles/mc.dir/nam/nsolv.c.o CMakeFiles/mc.dir/dyn/dyn.c.o CMakeFiles/mc.dir/dyn/svio.c.o CMakeFiles/mc.dir/mcsh/mcsh.c.o /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so /usr/lib/x86_64-linux-gnu/libblas.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a -lmaloc ../../punc/src/libpunc.so.1.9.3 /usr/lib/x86_64-linux-gnu/libblas.so -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../punc/src/vf2c/libvf2c.so.1.9.3 ../../punc/src/cgcode/libcgcode.so.1.9.3 cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cmake -E cmake_symlink_library libmc.so.1.9.3 libmc.so.1.9 libmc.so make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 72%] Built target mc [ 73%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfExtract.C.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/x86_64-linux-gnu-g++ -Dgamer_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfExtract.C.o -MF CMakeFiles/gamer.dir/biom/SurfExtract.C.o.d -o CMakeFiles/gamer.dir/biom/SurfExtract.C.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/SurfExtract.C [ 73%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfRefine.C.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/x86_64-linux-gnu-g++ -Dgamer_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfRefine.C.o -MF CMakeFiles/gamer.dir/biom/SurfRefine.C.o.d -o CMakeFiles/gamer.dir/biom/SurfRefine.C.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/SurfRefine.C make -f src/generic/CMakeFiles/apbs_generic.dir/build.make src/generic/CMakeFiles/apbs_generic.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/src/generic /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/generic /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/generic/CMakeFiles/apbs_generic.dir/DependInfo.cmake "--color=" apbs_generic make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make -f src/generic/CMakeFiles/apbs_generic.dir/build.make src/generic/CMakeFiles/apbs_generic.dir/build make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 74%] Building C object src/generic/CMakeFiles/apbs_generic.dir/nosh.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/generic && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/generic/CMakeFiles/apbs_generic.dir/nosh.c.o -MF CMakeFiles/apbs_generic.dir/nosh.c.o.d -o CMakeFiles/apbs_generic.dir/nosh.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/generic/nosh.c [ 74%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfSmooth.C.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/x86_64-linux-gnu-g++ -Dgamer_EXPORTS -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfSmooth.C.o -MF CMakeFiles/gamer.dir/biom/SurfSmooth.C.o.d -o CMakeFiles/gamer.dir/biom/SurfSmooth.C.o -c /build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/SurfSmooth.C [ 74%] Building C object src/generic/CMakeFiles/apbs_generic.dir/mgparm.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/generic && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/generic/CMakeFiles/apbs_generic.dir/mgparm.c.o -MF CMakeFiles/apbs_generic.dir/mgparm.c.o.d -o CMakeFiles/apbs_generic.dir/mgparm.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/generic/mgparm.c [ 74%] Linking CXX shared library libgamer.so cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamer.dir/link.txt --verbose=1 [ 74%] Building C object src/generic/CMakeFiles/apbs_generic.dir/femparm.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/generic && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/generic/CMakeFiles/apbs_generic.dir/femparm.c.o -MF CMakeFiles/apbs_generic.dir/femparm.c.o.d -o CMakeFiles/apbs_generic.dir/femparm.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/generic/femparm.c /usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -shared -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--dependency-file=CMakeFiles/gamer.dir/link.d -Wl,-soname,libgamer.so.1.9 -o libgamer.so.1.9.3 CMakeFiles/gamer.dir/base/gamer_base.c.o CMakeFiles/gamer.dir/triangle/triangle.c.o CMakeFiles/gamer.dir/tetgen/predicates.cpp.o CMakeFiles/gamer.dir/tetgen/tetgen.cpp.o CMakeFiles/gamer.dir/biom/CorrectNormals.C.o CMakeFiles/gamer.dir/biom/GenerateSphereMesh.C.o CMakeFiles/gamer.dir/biom/MarchingCube.C.o CMakeFiles/gamer.dir/biom/PDB2Mesh.C.o CMakeFiles/gamer.dir/biom/PDB2Volume.C.o CMakeFiles/gamer.dir/biom/ReadLattice.C.o CMakeFiles/gamer.dir/biom/ReadPDB.C.o CMakeFiles/gamer.dir/biom/ReadWriteMesh.C.o CMakeFiles/gamer.dir/biom/RegionGrowing.C.o CMakeFiles/gamer.dir/biom/SurfaceMesh.C.o CMakeFiles/gamer.dir/biom/SurfExtract.C.o CMakeFiles/gamer.dir/biom/SurfRefine.C.o CMakeFiles/gamer.dir/biom/SurfSmooth.C.o -lmaloc cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/cmake -E cmake_symlink_library libgamer.so.1.9.3 libgamer.so.1.9 libgamer.so make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 74%] Built target gamer make -f src/pmgc/CMakeFiles/apbs_pmgc.dir/build.make src/pmgc/CMakeFiles/apbs_pmgc.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/src/pmgc /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc/CMakeFiles/apbs_pmgc.dir/DependInfo.cmake "--color=" apbs_pmgc [ 74%] Building C object src/generic/CMakeFiles/apbs_generic.dir/pbamparm.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/generic && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/generic/CMakeFiles/apbs_generic.dir/pbamparm.c.o -MF CMakeFiles/apbs_generic.dir/pbamparm.c.o.d -o CMakeFiles/apbs_generic.dir/pbamparm.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/generic/pbamparm.c make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make -f src/pmgc/CMakeFiles/apbs_pmgc.dir/build.make src/pmgc/CMakeFiles/apbs_pmgc.dir/build make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 75%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildAd.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/buildAd.c.o -MF CMakeFiles/apbs_pmgc.dir/buildAd.c.o.d -o CMakeFiles/apbs_pmgc.dir/buildAd.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/pmgc/buildAd.c [ 75%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildBd.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/buildBd.c.o -MF CMakeFiles/apbs_pmgc.dir/buildBd.c.o.d -o CMakeFiles/apbs_pmgc.dir/buildBd.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/pmgc/buildBd.c [ 76%] Building C object src/generic/CMakeFiles/apbs_generic.dir/pbsamparm.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/generic && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/generic/CMakeFiles/apbs_generic.dir/pbsamparm.c.o -MF CMakeFiles/apbs_generic.dir/pbsamparm.c.o.d -o CMakeFiles/apbs_generic.dir/pbsamparm.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/generic/pbsamparm.c [ 76%] Building C object src/generic/CMakeFiles/apbs_generic.dir/pbeparm.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/generic && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/generic/CMakeFiles/apbs_generic.dir/pbeparm.c.o -MF CMakeFiles/apbs_generic.dir/pbeparm.c.o.d -o CMakeFiles/apbs_generic.dir/pbeparm.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/generic/pbeparm.c [ 76%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildGd.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/buildGd.c.o -MF CMakeFiles/apbs_pmgc.dir/buildGd.c.o.d -o CMakeFiles/apbs_pmgc.dir/buildGd.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/pmgc/buildGd.c [ 76%] Building C object src/generic/CMakeFiles/apbs_generic.dir/bemparm.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/generic && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/generic/CMakeFiles/apbs_generic.dir/bemparm.c.o -MF CMakeFiles/apbs_generic.dir/bemparm.c.o.d -o CMakeFiles/apbs_generic.dir/bemparm.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/generic/bemparm.c [ 77%] Building C object src/generic/CMakeFiles/apbs_generic.dir/geoflowparm.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/generic && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx 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-I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/generic/CMakeFiles/apbs_generic.dir/vacc.c.o -MF CMakeFiles/apbs_generic.dir/vacc.c.o.d -o CMakeFiles/apbs_generic.dir/vacc.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/generic/vacc.c [ 77%] Building C object src/generic/CMakeFiles/apbs_generic.dir/valist.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/generic && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_generic_EXPORTS 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-I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/generic/CMakeFiles/apbs_generic.dir/vclist.c.o -MF CMakeFiles/apbs_generic.dir/vclist.c.o.d -o CMakeFiles/apbs_generic.dir/vclist.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/generic/vclist.c [ 79%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vstring.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/generic && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn 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-D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/generic/CMakeFiles/apbs_generic.dir/vparam.c.o -MF CMakeFiles/apbs_generic.dir/vparam.c.o.d -o CMakeFiles/apbs_generic.dir/vparam.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/generic/vparam.c [ 79%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vgreen.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/generic && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/generic/CMakeFiles/apbs_generic.dir/vgreen.c.o -MF CMakeFiles/apbs_generic.dir/vgreen.c.o.d -o CMakeFiles/apbs_generic.dir/vgreen.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/generic/vgreen.c [ 80%] Linking C shared library libapbs_generic.so cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cmake -E cmake_link_script CMakeFiles/apbs_generic.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -shared -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--dependency-file=CMakeFiles/apbs_generic.dir/link.d -Wl,-soname,libapbs_generic.so.3 -o libapbs_generic.so.3 CMakeFiles/apbs_generic.dir/nosh.c.o CMakeFiles/apbs_generic.dir/mgparm.c.o CMakeFiles/apbs_generic.dir/femparm.c.o CMakeFiles/apbs_generic.dir/pbamparm.c.o CMakeFiles/apbs_generic.dir/pbsamparm.c.o CMakeFiles/apbs_generic.dir/pbeparm.c.o CMakeFiles/apbs_generic.dir/bemparm.c.o CMakeFiles/apbs_generic.dir/geoflowparm.c.o CMakeFiles/apbs_generic.dir/apolparm.c.o CMakeFiles/apbs_generic.dir/vacc.c.o CMakeFiles/apbs_generic.dir/valist.c.o CMakeFiles/apbs_generic.dir/vatom.c.o CMakeFiles/apbs_generic.dir/vpbe.c.o CMakeFiles/apbs_generic.dir/vcap.c.o CMakeFiles/apbs_generic.dir/vclist.c.o CMakeFiles/apbs_generic.dir/vstring.c.o CMakeFiles/apbs_generic.dir/vparam.c.o CMakeFiles/apbs_generic.dir/vgreen.c.o ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so /usr/lib/x86_64-linux-gnu/libblas.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 /usr/lib/x86_64-linux-gnu/libblas.so cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cmake -E cmake_symlink_library libapbs_generic.so.3 libapbs_generic.so.3 libapbs_generic.so make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 80%] Built target apbs_generic make -f src/fem/CMakeFiles/apbs_fem.dir/build.make src/fem/CMakeFiles/apbs_fem.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/src/fem /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/fem /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/fem/CMakeFiles/apbs_fem.dir/DependInfo.cmake "--color=" apbs_fem make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make -f src/fem/CMakeFiles/apbs_fem.dir/build.make src/fem/CMakeFiles/apbs_fem.dir/build make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 80%] Building C object src/fem/CMakeFiles/apbs_fem.dir/vcsm.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/fem && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_fem_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/fem/CMakeFiles/apbs_fem.dir/vcsm.c.o -MF CMakeFiles/apbs_fem.dir/vcsm.c.o.d -o CMakeFiles/apbs_fem.dir/vcsm.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/fem/vcsm.c [ 81%] Building C object src/fem/CMakeFiles/apbs_fem.dir/vfetk.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/fem && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_fem_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/fem/CMakeFiles/apbs_fem.dir/vfetk.c.o -MF CMakeFiles/apbs_fem.dir/vfetk.c.o.d -o CMakeFiles/apbs_fem.dir/vfetk.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/fem/vfetk.c /build/apbs-56d3Iv/apbs-3.4.1/src/fem/vfetk.c: In function ‘Bmat_printHB’: /build/apbs-56d3Iv/apbs-3.4.1/src/fem/vfetk.c:1073:28: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 1073 | sprintf(ptrfmt,"(%dI%d)",nptrline,numZdigits+1); | ^ In file included from /usr/include/stdio.h:974, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /build/apbs-56d3Iv/apbs-3.4.1/src/fem/vfetk.h:67, from /build/apbs-56d3Iv/apbs-3.4.1/src/fem/vfetk.c:57: In function ‘sprintf’, inlined from ‘Bmat_printHB’ at /build/apbs-56d3Iv/apbs-3.4.1/src/fem/vfetk.c:1073:5: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 6 and 18 bytes into a destination of size 17 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/src/fem/vfetk.c: In function ‘Bmat_printHB’: /build/apbs-56d3Iv/apbs-3.4.1/src/fem/vfetk.c:1074:26: warning: ‘%d’ directive writing between 1 and 11 bytes into a region of size 4 [-Wformat-overflow=] 1074 | sprintf(ptrfmtstr,"%%%dd",numZdigits+1); | ^~ /build/apbs-56d3Iv/apbs-3.4.1/src/fem/vfetk.c:1074:23: note: directive argument in the range [-2147483646, 2147483647] 1074 | sprintf(ptrfmtstr,"%%%dd",numZdigits+1); | ^~~~~~~ In function ‘sprintf’, inlined from ‘Bmat_printHB’ at /build/apbs-56d3Iv/apbs-3.4.1/src/fem/vfetk.c:1074:5: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 4 and 14 bytes into a destination of size 5 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/src/fem/vfetk.c: In function ‘Bmat_printHB’: /build/apbs-56d3Iv/apbs-3.4.1/src/fem/vfetk.c:1075:28: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 1075 | sprintf(indfmt,"(%dI%d)",nindline,nrowdigits+1); | ^ In function ‘sprintf’, inlined from ‘Bmat_printHB’ at /build/apbs-56d3Iv/apbs-3.4.1/src/fem/vfetk.c:1075:5: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 6 and 18 bytes into a destination of size 17 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/src/fem/vfetk.c: In function ‘Bmat_printHB’: /build/apbs-56d3Iv/apbs-3.4.1/src/fem/vfetk.c:1076:26: warning: ‘%d’ directive writing between 1 and 11 bytes into a region of size 4 [-Wformat-overflow=] 1076 | sprintf(indfmtstr,"%%%dd",nrowdigits+1); | ^~ /build/apbs-56d3Iv/apbs-3.4.1/src/fem/vfetk.c:1076:23: note: directive argument in the range [-2147483646, 2147483647] 1076 | sprintf(indfmtstr,"%%%dd",nrowdigits+1); | ^~~~~~~ In function ‘sprintf’, inlined from ‘Bmat_printHB’ at /build/apbs-56d3Iv/apbs-3.4.1/src/fem/vfetk.c:1076:5: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 4 and 14 bytes into a destination of size 5 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 81%] Building C object src/fem/CMakeFiles/apbs_fem.dir/vpee.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/fem && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_fem_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/fem/CMakeFiles/apbs_fem.dir/vpee.c.o -MF CMakeFiles/apbs_fem.dir/vpee.c.o.d -o CMakeFiles/apbs_fem.dir/vpee.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/fem/vpee.c [ 81%] Linking C shared library libapbs_fem.so cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/fem && /usr/bin/cmake -E cmake_link_script CMakeFiles/apbs_fem.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -shared -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--dependency-file=CMakeFiles/apbs_fem.dir/link.d -Wl,-soname,libapbs_fem.so.3 -o libapbs_fem.so.3 CMakeFiles/apbs_fem.dir/vcsm.c.o CMakeFiles/apbs_fem.dir/vfetk.c.o CMakeFiles/apbs_fem.dir/vpee.c.o -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so /usr/lib/x86_64-linux-gnu/libblas.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp ../generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/fem && /usr/bin/cmake -E cmake_symlink_library libapbs_fem.so.3 libapbs_fem.so.3 libapbs_fem.so make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 81%] Built target apbs_fem [ 82%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildPd.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/buildPd.c.o -MF CMakeFiles/apbs_pmgc.dir/buildPd.c.o.d -o CMakeFiles/apbs_pmgc.dir/buildPd.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/pmgc/buildPd.c [ 82%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o -MF CMakeFiles/apbs_pmgc.dir/cgd.c.o.d -o CMakeFiles/apbs_pmgc.dir/cgd.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/pmgc/cgd.c [ 82%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn 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/build/apbs-56d3Iv/apbs-3.4.1/src/pmgc/gsd.c [ 82%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o -MF CMakeFiles/apbs_pmgc.dir/matvecd.c.o.d -o CMakeFiles/apbs_pmgc.dir/matvecd.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/pmgc/matvecd.c [ 83%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgcsd.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/mgcsd.c.o -MF CMakeFiles/apbs_pmgc.dir/mgcsd.c.o.d -o CMakeFiles/apbs_pmgc.dir/mgcsd.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/pmgc/mgcsd.c [ 83%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o -MF CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o.d -o CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/pmgc/mgdrvd.c [ 83%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgsubd.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/mgsubd.c.o -MF CMakeFiles/apbs_pmgc.dir/mgsubd.c.o.d -o CMakeFiles/apbs_pmgc.dir/mgsubd.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/pmgc/mgsubd.c [ 83%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mikpckd.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/mikpckd.c.o -MF CMakeFiles/apbs_pmgc.dir/mikpckd.c.o.d -o CMakeFiles/apbs_pmgc.dir/mikpckd.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/pmgc/mikpckd.c [ 84%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o -MF CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o.d -o CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/pmgc/mlinpckd.c [ 84%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mypdec.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/mypdec.c.o -MF CMakeFiles/apbs_pmgc.dir/mypdec.c.o.d -o CMakeFiles/apbs_pmgc.dir/mypdec.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/pmgc/mypdec.c [ 84%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/newtond.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/newtond.c.o -MF CMakeFiles/apbs_pmgc.dir/newtond.c.o.d -o CMakeFiles/apbs_pmgc.dir/newtond.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/pmgc/newtond.c [ 85%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/newdrvd.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/newdrvd.c.o -MF CMakeFiles/apbs_pmgc.dir/newdrvd.c.o.d -o CMakeFiles/apbs_pmgc.dir/newdrvd.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/pmgc/newdrvd.c [ 85%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/powerd.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/powerd.c.o -MF CMakeFiles/apbs_pmgc.dir/powerd.c.o.d -o CMakeFiles/apbs_pmgc.dir/powerd.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/pmgc/powerd.c [ 85%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/smoothd.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/smoothd.c.o -MF CMakeFiles/apbs_pmgc.dir/smoothd.c.o.d -o CMakeFiles/apbs_pmgc.dir/smoothd.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/pmgc/smoothd.c [ 85%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgfasd.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/mgfasd.c.o -MF CMakeFiles/apbs_pmgc.dir/mgfasd.c.o.d -o CMakeFiles/apbs_pmgc.dir/mgfasd.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/pmgc/mgfasd.c [ 86%] Linking C shared library libapbs_pmgc.so cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cmake -E cmake_link_script CMakeFiles/apbs_pmgc.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -shared -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--dependency-file=CMakeFiles/apbs_pmgc.dir/link.d -Wl,-soname,libapbs_pmgc.so.3 -o libapbs_pmgc.so.3 CMakeFiles/apbs_pmgc.dir/buildAd.c.o CMakeFiles/apbs_pmgc.dir/buildBd.c.o CMakeFiles/apbs_pmgc.dir/buildGd.c.o CMakeFiles/apbs_pmgc.dir/buildPd.c.o CMakeFiles/apbs_pmgc.dir/cgd.c.o CMakeFiles/apbs_pmgc.dir/gsd.c.o CMakeFiles/apbs_pmgc.dir/matvecd.c.o CMakeFiles/apbs_pmgc.dir/mgcsd.c.o CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o CMakeFiles/apbs_pmgc.dir/mgsubd.c.o CMakeFiles/apbs_pmgc.dir/mikpckd.c.o CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o CMakeFiles/apbs_pmgc.dir/mypdec.c.o CMakeFiles/apbs_pmgc.dir/newtond.c.o CMakeFiles/apbs_pmgc.dir/newdrvd.c.o CMakeFiles/apbs_pmgc.dir/powerd.c.o CMakeFiles/apbs_pmgc.dir/smoothd.c.o CMakeFiles/apbs_pmgc.dir/mgfasd.c.o ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so /usr/lib/x86_64-linux-gnu/libblas.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 /usr/lib/x86_64-linux-gnu/libblas.so cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cmake -E cmake_symlink_library libapbs_pmgc.so.3 libapbs_pmgc.so.3 libapbs_pmgc.so make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 86%] Built target apbs_pmgc make -f src/mg/CMakeFiles/apbs_mg.dir/build.make src/mg/CMakeFiles/apbs_mg.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/src/mg /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/mg /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/mg/CMakeFiles/apbs_mg.dir/DependInfo.cmake "--color=" apbs_mg make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make -f src/mg/CMakeFiles/apbs_mg.dir/build.make src/mg/CMakeFiles/apbs_mg.dir/build make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 86%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vmgrid.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/mg && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_mg_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/mg/CMakeFiles/apbs_mg.dir/vmgrid.c.o -MF CMakeFiles/apbs_mg.dir/vmgrid.c.o.d -o CMakeFiles/apbs_mg.dir/vmgrid.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/mg/vmgrid.c [ 86%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vgrid.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/mg && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_mg_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/mg/CMakeFiles/apbs_mg.dir/vgrid.c.o -MF CMakeFiles/apbs_mg.dir/vgrid.c.o.d -o CMakeFiles/apbs_mg.dir/vgrid.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/mg/vgrid.c /build/apbs-56d3Iv/apbs-3.4.1/src/mg/vgrid.c: In function ‘Vgrid_readDXBIN’: /build/apbs-56d3Iv/apbs-3.4.1/src/mg/vgrid.c:853:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 853 | fgets(tok, VMAX_BUFSIZE, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 87%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vopot.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/mg && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_mg_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/mg/CMakeFiles/apbs_mg.dir/vopot.c.o -MF CMakeFiles/apbs_mg.dir/vopot.c.o.d -o CMakeFiles/apbs_mg.dir/vopot.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/mg/vopot.c /build/apbs-56d3Iv/apbs-3.4.1/src/mg/vgrid.c:831:7: warning: argument 1 null where non-null expected [-Wnonnull] 831 | fclose(fd); | ^~~~~~~~~~ In file included from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /build/apbs-56d3Iv/apbs-3.4.1/src/mg/vgrid.h:67, from /build/apbs-56d3Iv/apbs-3.4.1/src/mg/vgrid.c:57: /usr/include/stdio.h:191:12: note: in a call to function ‘fclose’ declared ‘nonnull’ 191 | extern int fclose (FILE *__stream) __nonnull ((1)); | ^~~~~~ [ 87%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vpmg.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/mg && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_mg_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/mg/CMakeFiles/apbs_mg.dir/vpmg.c.o -MF CMakeFiles/apbs_mg.dir/vpmg.c.o.d -o CMakeFiles/apbs_mg.dir/vpmg.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/mg/vpmg.c [ 87%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vpmgp.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/mg && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_mg_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/mg/CMakeFiles/apbs_mg.dir/vpmgp.c.o -MF CMakeFiles/apbs_mg.dir/vpmgp.c.o.d -o CMakeFiles/apbs_mg.dir/vpmgp.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/mg/vpmgp.c [ 87%] Linking C shared library libapbs_mg.so cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/mg && /usr/bin/cmake -E cmake_link_script CMakeFiles/apbs_mg.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -shared -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--dependency-file=CMakeFiles/apbs_mg.dir/link.d -Wl,-soname,libapbs_mg.so.3 -o libapbs_mg.so.3 CMakeFiles/apbs_mg.dir/vgrid.c.o CMakeFiles/apbs_mg.dir/vmgrid.c.o CMakeFiles/apbs_mg.dir/vopot.c.o CMakeFiles/apbs_mg.dir/vpmg.c.o CMakeFiles/apbs_mg.dir/vpmgp.c.o -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so /usr/lib/x86_64-linux-gnu/libblas.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp ../generic/libapbs_generic.so.3 ../pmgc/libapbs_pmgc.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/mg && /usr/bin/cmake -E cmake_symlink_library libapbs_mg.so.3 libapbs_mg.so.3 libapbs_mg.so make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 87%] Built target apbs_mg make -f src/CMakeFiles/apbs_routines.dir/build.make src/CMakeFiles/apbs_routines.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/src /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/CMakeFiles/apbs_routines.dir/DependInfo.cmake "--color=" apbs_routines make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make -f src/CMakeFiles/apbs_routines.dir/build.make src/CMakeFiles/apbs_routines.dir/build make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 87%] Building C object src/CMakeFiles/apbs_routines.dir/routines.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src && /usr/bin/x86_64-linux-gnu-gcc -Dapbs_routines_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/CMakeFiles/apbs_routines.dir/routines.c.o -MF CMakeFiles/apbs_routines.dir/routines.c.o.d -o CMakeFiles/apbs_routines.dir/routines.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c: In function ‘initAPOL’: /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:5046:20: warning: ‘Vparam_getAtomData’ accessing 1024 bytes in a region of size 4 [-Wstringop-overflow=] 5046 | atomData = Vparam_getAtomData(param, "WAT", "OW"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:5046:20: note: referencing argument 2 of type ‘char[1024]’ /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:5046:20: warning: ‘Vparam_getAtomData’ accessing 1024 bytes in a region of size 3 [-Wstringop-overflow=] /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:5046:20: note: referencing argument 3 of type ‘char[1024]’ In file included from /build/apbs-56d3Iv/apbs-3.4.1/src/generic/apolparm.h:73, from /build/apbs-56d3Iv/apbs-3.4.1/src/generic/nosh.h:73, from /build/apbs-56d3Iv/apbs-3.4.1/src/apbs.h:70, from /build/apbs-56d3Iv/apbs-3.4.1/src/routines.h:64, from /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:54: /build/apbs-56d3Iv/apbs-3.4.1/src/generic/vparam.h:304:27: note: in a call to function ‘Vparam_getAtomData’ 304 | VEXTERNC Vparam_AtomData* Vparam_getAtomData(Vparam *thee, | ^~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:5048:24: warning: ‘Vparam_getAtomData’ accessing 1024 bytes in a region of size 4 [-Wstringop-overflow=] 5048 | atomData = Vparam_getAtomData(param, "WAT", "O"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:5048:24: note: referencing argument 2 of type ‘char[1024]’ /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:5048:24: warning: ‘Vparam_getAtomData’ accessing 1024 bytes in a region of size 2 [-Wstringop-overflow=] /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:5048:24: note: referencing argument 3 of type ‘char[1024]’ /build/apbs-56d3Iv/apbs-3.4.1/src/generic/vparam.h:304:27: note: in a call to function ‘Vparam_getAtomData’ 304 | VEXTERNC Vparam_AtomData* Vparam_getAtomData(Vparam *thee, | ^~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c: In function ‘writematMG’: /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:2020:30: warning: ‘%s’ directive writing 3 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2020 | sprintf(outpath, "%s.%s", writematstem, "mat"); | ^~ ~~~~~ In file included from /usr/include/stdio.h:974, from /usr/include/maloc/maloc_base.h:80, from /usr/include/maloc/maloc.h:38, from /build/apbs-56d3Iv/apbs-3.4.1/src/apbs.h:67: In function ‘sprintf’, inlined from ‘writematMG’ at /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:2020:9: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 5 and 1028 bytes into a destination of size 1024 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c: In function ‘writedataMG’: /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:2919:34: warning: ‘%s’ directive writing 5 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2919 | sprintf(outpath, "%s.%s", writestem, "dxbin"); | ^~ ~~~~~~~ In function ‘sprintf’, inlined from ‘writedataMG’ at /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:2919:13: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 7 and 1030 bytes into a destination of size 1024 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c: In function ‘writedataMG’: /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:2963:34: warning: ‘%s’ directive writing 3 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2963 | sprintf(outpath, "%s.%s", writestem, "txt"); | ^~ ~~~~~ In function ‘sprintf’, inlined from ‘writedataMG’ at /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:2963:13: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 5 and 1028 bytes into a destination of size 1024 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c: In function ‘writedataMG’: /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:2954:34: warning: ‘%s’ directive writing 5 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2954 | sprintf(outpath, "%s.%s", writestem, "dx.gz"); | ^~ ~~~~~~~ In function ‘sprintf’, inlined from ‘writedataMG’ at /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:2954:13: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 7 and 1030 bytes into a destination of size 1024 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c: In function ‘writedataMG’: /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:2937:34: warning: ‘%s’ directive writing 4 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2937 | sprintf(outpath, "%s.%s", writestem, "mcsf"); | ^~ ~~~~~~ In function ‘sprintf’, inlined from ‘writedataMG’ at /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:2937:13: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 6 and 1029 bytes into a destination of size 1024 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c: In function ‘writedataMG’: /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:2930:34: warning: ‘%s’ directive writing 3 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2930 | sprintf(outpath, "%s.%s", writestem, "ucd"); | ^~ ~~~~~ In function ‘sprintf’, inlined from ‘writedataMG’ at /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:2930:13: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 5 and 1028 bytes into a destination of size 1024 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c: In function ‘writedataMG’: /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:2944:34: warning: ‘%s’ directive writing 3 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2944 | sprintf(outpath, "%s.%s", writestem, "grd"); | ^~ ~~~~~ In function ‘sprintf’, inlined from ‘writedataMG’ at /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:2944:13: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 5 and 1028 bytes into a destination of size 1024 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c: In function ‘writedataMG’: /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:2909:34: warning: ‘%s’ directive writing 2 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2909 | sprintf(outpath, "%s.%s", writestem, "dx"); | ^~ ~~~~ In function ‘sprintf’, inlined from ‘writedataMG’ at /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:2909:13: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 4 and 1027 bytes into a destination of size 1024 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c: In function ‘writedataFE’: /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:4887:34: warning: ‘%s’ directive writing 5 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 4887 | sprintf(outpath, "%s.%s", writestem, "dxbin"); | ^~ ~~~~~~~ In function ‘sprintf’, inlined from ‘writedataFE’ at /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:4887:13: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 7 and 1030 bytes into a destination of size 1024 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c: In function ‘writedataFE’: /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:4893:34: warning: ‘%s’ directive writing 3 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 4893 | sprintf(outpath, "%s.%s", writestem, "ucd"); | ^~ ~~~~~ In function ‘sprintf’, inlined from ‘writedataFE’ at /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:4893:13: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 5 and 1028 bytes into a destination of size 1024 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c: In function ‘writedataFE’: /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:4880:34: warning: ‘%s’ directive writing 2 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 4880 | sprintf(outpath, "%s.%s", writestem, "dx"); | ^~ ~~~~ In function ‘sprintf’, inlined from ‘writedataFE’ at /build/apbs-56d3Iv/apbs-3.4.1/src/routines.c:4880:13: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 4 and 1027 bytes into a destination of size 1024 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 88%] Linking C shared library libapbs_routines.so cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/apbs_routines.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -shared -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--dependency-file=CMakeFiles/apbs_routines.dir/link.d -Wl,-soname,libapbs_routines.so.3 -o libapbs_routines.so.3 CMakeFiles/apbs_routines.dir/routines.c.o -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so /usr/lib/x86_64-linux-gnu/libblas.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so /usr/lib/x86_64-linux-gnu/libblas.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp mg/libapbs_mg.so.3 fem/libapbs_fem.so.3 pmgc/libapbs_pmgc.so.3 generic/libapbs_generic.so.3 ../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src && /usr/bin/cmake -E cmake_symlink_library libapbs_routines.so.3 libapbs_routines.so.3 libapbs_routines.so make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 88%] Built target apbs_routines make -f src/CMakeFiles/apbs.dir/build.make src/CMakeFiles/apbs.dir/depend make -f tools/mesh/CMakeFiles/mgmesh.dir/build.make tools/mesh/CMakeFiles/mgmesh.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/src /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src/CMakeFiles/apbs.dir/DependInfo.cmake "--color=" apbs make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/mgmesh.dir/DependInfo.cmake "--color=" mgmesh make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make -f src/CMakeFiles/apbs.dir/build.make src/CMakeFiles/apbs.dir/build make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make -f tools/mesh/CMakeFiles/mgmesh.dir/build.make tools/mesh/CMakeFiles/mgmesh.dir/build make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 88%] Building C object src/CMakeFiles/apbs.dir/main.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src && /usr/bin/x86_64-linux-gnu-gcc -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIE -fopenmp -MD -MT src/CMakeFiles/apbs.dir/main.c.o -MF CMakeFiles/apbs.dir/main.c.o.d -o CMakeFiles/apbs.dir/main.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/src/main.c [ 89%] Building C object tools/mesh/CMakeFiles/mgmesh.dir/mgmesh.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/x86_64-linux-gnu-gcc -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/mgmesh.dir/mgmesh.c.o -MF CMakeFiles/mgmesh.dir/mgmesh.c.o.d -o CMakeFiles/mgmesh.dir/mgmesh.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/mgmesh.c /build/apbs-56d3Iv/apbs-3.4.1/src/main.c: In function ‘main’: /build/apbs-56d3Iv/apbs-3.4.1/src/main.c:319:64: warning: macro ‘__DATE__’ might prevent reproducible builds [-Wdate-time] 319 | Vnm_tprint( 1, "This executable compiled on %s at %s\n\n", __DATE__, __TIME__); | ^~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/src/main.c:319:74: warning: macro ‘__TIME__’ might prevent reproducible builds [-Wdate-time] 319 | Vnm_tprint( 1, "This executable compiled on %s at %s\n\n", __DATE__, __TIME__); | ^~~~~~~~ [ 89%] Linking C executable ../bin/mgmesh cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/mgmesh.dir/link.txt --verbose=1 [ 89%] Linking C executable apbs cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/apbs.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed -Wl,--dependency-file=CMakeFiles/mgmesh.dir/link.d CMakeFiles/mgmesh.dir/mgmesh.c.o -o ../bin/mgmesh ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 89%] Built target mgmesh make -f tools/mesh/CMakeFiles/smooth.dir/build.make tools/mesh/CMakeFiles/smooth.dir/depend make[3]: Entering directory 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-ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed -Wl,--dependency-file=CMakeFiles/apbs.dir/link.d CMakeFiles/apbs.dir/main.c.o -o apbs -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so /usr/lib/x86_64-linux-gnu/libblas.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp libapbs_routines.so.3 mg/libapbs_mg.so.3 pmgc/libapbs_pmgc.so.3 fem/libapbs_fem.so.3 generic/libapbs_generic.so.3 ../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 89%] Built target apbs make -f tools/mesh/CMakeFiles/dxmath.dir/build.make 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/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/dxmath.dir/link.txt --verbose=1 [ 89%] Linking C executable ../bin/smooth cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/smooth.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed -Wl,--dependency-file=CMakeFiles/dxmath.dir/link.d CMakeFiles/dxmath.dir/dxmath.c.o -o ../bin/dxmath ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 89%] Built target dxmath make -f tools/mesh/CMakeFiles/mergedx.dir/build.make tools/mesh/CMakeFiles/mergedx.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/mergedx.dir/DependInfo.cmake "--color=" mergedx make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make -f tools/mesh/CMakeFiles/mergedx.dir/build.make tools/mesh/CMakeFiles/mergedx.dir/build make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 90%] Building C object tools/mesh/CMakeFiles/mergedx.dir/mergedx.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/x86_64-linux-gnu-gcc -I/usr/lib/x86_64-linux-gnu/openmpi/include 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-ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed -Wl,--dependency-file=CMakeFiles/smooth.dir/link.d CMakeFiles/smooth.dir/smooth.c.o -o ../bin/smooth ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so 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/usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 90%] Built target mergedx make -f tools/mesh/CMakeFiles/value.dir/build.make tools/mesh/CMakeFiles/value.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu 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-I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/value.dir/value.c.o -MF CMakeFiles/value.dir/value.c.o.d -o CMakeFiles/value.dir/value.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/value.c [ 91%] Linking C executable ../bin/value cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/value.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed -Wl,--dependency-file=CMakeFiles/mergedx2.dir/link.d CMakeFiles/mergedx2.dir/mergedx2.c.o -o ../bin/mergedx2 ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 91%] Built target mergedx2 make -f tools/mesh/CMakeFiles/multivalue.dir/build.make tools/mesh/CMakeFiles/multivalue.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/multivalue.dir/DependInfo.cmake "--color=" multivalue make[3]: Leaving directory 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/multivalue.dir/multivalue.c.o -MF CMakeFiles/multivalue.dir/multivalue.c.o.d -o CMakeFiles/multivalue.dir/multivalue.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/multivalue.c /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed -Wl,--dependency-file=CMakeFiles/value.dir/link.d CMakeFiles/value.dir/value.c.o -o ../bin/value ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 91%] Built target value make -f 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92%] Linking C executable ../bin/multivalue cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/multivalue.dir/link.txt --verbose=1 [ 93%] Linking C executable ../bin/benchmark cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/benchmark.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed -Wl,--dependency-file=CMakeFiles/multivalue.dir/link.d CMakeFiles/multivalue.dir/multivalue.c.o -o ../bin/multivalue ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 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-Wl,--dependency-file=CMakeFiles/benchmark.dir/link.d CMakeFiles/benchmark.dir/benchmark.c.o -o ../bin/benchmark ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make -f tools/mesh/CMakeFiles/similarity.dir/build.make tools/mesh/CMakeFiles/similarity.dir/build make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 93%] Building C object tools/mesh/CMakeFiles/similarity.dir/similarity.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/x86_64-linux-gnu-gcc -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base 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-I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/analysis.dir/analysis.c.o -MF CMakeFiles/analysis.dir/analysis.c.o.d -o CMakeFiles/analysis.dir/analysis.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/analysis.c [ 94%] Linking C executable ../bin/similarity cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/similarity.dir/link.txt --verbose=1 [ 95%] Linking C executable ../bin/analysis cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/analysis.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed -Wl,--dependency-file=CMakeFiles/similarity.dir/link.d CMakeFiles/similarity.dir/similarity.c.o -o ../bin/similarity ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 95%] Built target similarity make -f tools/mesh/CMakeFiles/dx2mol.dir/build.make tools/mesh/CMakeFiles/dx2mol.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dx2mol.dir/DependInfo.cmake "--color=" dx2mol make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make -f tools/mesh/CMakeFiles/dx2mol.dir/build.make tools/mesh/CMakeFiles/dx2mol.dir/build make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 95%] Building C object tools/mesh/CMakeFiles/dx2mol.dir/dx2mol.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/x86_64-linux-gnu-gcc -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src 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-Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed -Wl,--dependency-file=CMakeFiles/analysis.dir/link.d CMakeFiles/analysis.dir/analysis.c.o -o ../bin/analysis ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 95%] Built target analysis make -f tools/mesh/CMakeFiles/dx2uhbd.dir/build.make tools/mesh/CMakeFiles/dx2uhbd.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dx2uhbd.dir/DependInfo.cmake "--color=" dx2uhbd make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make -f tools/mesh/CMakeFiles/dx2uhbd.dir/build.make 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-ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/dx2uhbd.dir/dx2uhbd.c.o -MF CMakeFiles/dx2uhbd.dir/dx2uhbd.c.o.d -o CMakeFiles/dx2uhbd.dir/dx2uhbd.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/dx2uhbd.c [ 96%] Linking C executable ../bin/dx2uhbd cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/dx2uhbd.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed -Wl,--dependency-file=CMakeFiles/dx2mol.dir/link.d CMakeFiles/dx2mol.dir/dx2mol.c.o -o ../bin/dx2mol ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 96%] Built target dx2mol make -f tools/mesh/CMakeFiles/del2dx.dir/build.make tools/mesh/CMakeFiles/del2dx.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/del2dx.dir/DependInfo.cmake "--color=" del2dx make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make -f tools/mesh/CMakeFiles/del2dx.dir/build.make tools/mesh/CMakeFiles/del2dx.dir/build make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 96%] Building C object tools/mesh/CMakeFiles/del2dx.dir/del2dx.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/x86_64-linux-gnu-gcc -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde 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-fopenmp -MD -MT tools/mesh/CMakeFiles/del2dx.dir/del2dx.c.o -MF CMakeFiles/del2dx.dir/del2dx.c.o.d -o CMakeFiles/del2dx.dir/del2dx.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/del2dx.c /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed -Wl,--dependency-file=CMakeFiles/dx2uhbd.dir/link.d CMakeFiles/dx2uhbd.dir/dx2uhbd.c.o -o ../bin/dx2uhbd ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 96%] Built target dx2uhbd make -f tools/mesh/CMakeFiles/tensor2dx.dir/build.make tools/mesh/CMakeFiles/tensor2dx.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/tensor2dx.dir/DependInfo.cmake "--color=" tensor2dx make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make -f tools/mesh/CMakeFiles/tensor2dx.dir/build.make tools/mesh/CMakeFiles/tensor2dx.dir/build make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 97%] Building C object tools/mesh/CMakeFiles/tensor2dx.dir/tensor2dx.c.o /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/del2dx.c: In function ‘main’: /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/del2dx.c:76:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 76 | fread(&igrid, 1, sizeof(int), pfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/del2dx.c:89:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 89 | fread(buffer, 1, sizeof(char) * 10, pfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/del2dx.c:97:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fread(data, tot_grid, sizeof(float), pfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/del2dx.c:103:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 103 | fread(&scale, 1, sizeof(float), pfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/del2dx.c:106:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 106 | fread(oldmid, 3, sizeof(float), pfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/x86_64-linux-gnu-gcc -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/tensor2dx.dir/tensor2dx.c.o -MF CMakeFiles/tensor2dx.dir/tensor2dx.c.o.d -o CMakeFiles/tensor2dx.dir/tensor2dx.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/tensor2dx.c /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/tensor2dx.c: In function ‘main’: /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/tensor2dx.c:97:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fscanf(pfile1,"%lf %lf %lf",&origin_xyz[0],&origin_xyz[1],&origin_xyz[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/tensor2dx.c:98:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 98 | fscanf(pfile1,"%lf %lf %lf",&gspace[0],&gspace[1],&gspace[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/tensor2dx.c:137:17: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 137 | fscanf(pfile2,"%i %i %i",&itmp[0],&itmp[1],&itmp[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/tensor2dx.c:138:17: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 138 | fscanf(pfile2,"%lf %lf %lf",&datapt[0],&tmp[1],&tmp[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/tensor2dx.c:139:17: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 139 | fscanf(pfile2,"%lf %lf %lf",&tmp[0],&datapt[1],&tmp[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/tensor2dx.c:140:17: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 140 | fscanf(pfile2,"%lf %lf %lf",&tmp[0],&tmp[1],&datapt[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/tensor2dx.c:155:17: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 155 | fscanf(pfile2,"%i %i %i",&itmp[0],&itmp[1],&itmp[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/tensor2dx.c:156:17: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 156 | fscanf(pfile2,"%lf %lf %lf",&datapt[0],&tmp[1],&tmp[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/tensor2dx.c:157:17: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 157 | fscanf(pfile2,"%lf %lf %lf",&tmp[0],&datapt[1],&tmp[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/tensor2dx.c:158:17: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 158 | fscanf(pfile2,"%lf %lf %lf",&tmp[0],&tmp[1],&datapt[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 98%] Linking C executable ../bin/del2dx cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/del2dx.dir/link.txt --verbose=1 [ 98%] Linking C executable ../bin/tensor2dx cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/tensor2dx.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed -Wl,--dependency-file=CMakeFiles/del2dx.dir/link.d CMakeFiles/del2dx.dir/del2dx.c.o -o ../bin/del2dx ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 98%] Built target del2dx make -f tools/mesh/CMakeFiles/uhbd_asc2bin.dir/build.make tools/mesh/CMakeFiles/uhbd_asc2bin.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/uhbd_asc2bin.dir/DependInfo.cmake "--color=" uhbd_asc2bin make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make -f tools/mesh/CMakeFiles/uhbd_asc2bin.dir/build.make tools/mesh/CMakeFiles/uhbd_asc2bin.dir/build make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 98%] Building C object tools/mesh/CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/x86_64-linux-gnu-gcc -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/apbs-56d3Iv/apbs-3.4.1/src -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o -MF CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o.d -o CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed -Wl,--dependency-file=CMakeFiles/tensor2dx.dir/link.d CMakeFiles/tensor2dx.dir/tensor2dx.c.o -o ../bin/tensor2dx ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c: In function ‘main’: /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:30:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 30 | scanf("%s", flnm); | ^~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:42:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 42 | scanf("%s", newfile); | ^~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:54:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 54 | fscanf(inFile, "%s", title); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:57:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 57 | fscanf(inFile, "%lf", &scale); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:60:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 60 | fscanf(inFile, "%lf", &dum2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:63:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 63 | fscanf(inFile, "%d", &grdflg); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:66:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 66 | fscanf(inFile, "%d", &idum2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:69:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 69 | fscanf(inFile, "%d", &km); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:72:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 72 | fscanf(inFile, "%d", &one); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:75:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 75 | fscanf(inFile, "%d", &km); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:78:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 78 | fscanf(inFile, "%d", &im); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:81:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 81 | fscanf(inFile, "%d", &jm); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:84:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 84 | fscanf(inFile, "%d", &km); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:87:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 87 | fscanf(inFile, "%lf", &h); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:90:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 90 | fscanf(inFile, "%lf", &ox); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:93:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 93 | fscanf(inFile, "%lf", &oy); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:96:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 96 | fscanf(inFile, "%lf", &oz); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:99:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 99 | fscanf(inFile, "%lf", &dum3); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:102:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 102 | fscanf(inFile, "%lf", &dum4); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:105:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 105 | fscanf(inFile, "%lf", &dum5); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:108:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 108 | fscanf(inFile, "%lf", &dum6); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:111:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 111 | fscanf(inFile, "%lf", &dum7); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:114:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 114 | fscanf(inFile, "%lf", &dum8); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:117:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 117 | fscanf(inFile, "%d", &idum3); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:120:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 120 | fscanf(inFile, "%d", &idum4); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:125:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 125 | fscanf(inFile, "%d", &kk); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:128:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 128 | fscanf(inFile, "%d", &im); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:131:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | fscanf(inFile, "%d", &jm); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:138:17: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 138 | fscanf(inFile, "%lf", RAT3(grid, i, j, k)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 98%] Built target tensor2dx make -f tools/manip/CMakeFiles/coulomb.dir/build.make tools/manip/CMakeFiles/coulomb.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && 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../bin/coulomb cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/manip && /usr/bin/cmake -E cmake_link_script CMakeFiles/coulomb.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed -Wl,--dependency-file=CMakeFiles/uhbd_asc2bin.dir/link.d CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o -o ../bin/uhbd_asc2bin ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 99%] Built target uhbd_asc2bin make -f tools/manip/CMakeFiles/born.dir/build.make tools/manip/CMakeFiles/born.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd 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-I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/src -I/build/apbs-56d3Iv/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/manip/CMakeFiles/born.dir/born.c.o -MF CMakeFiles/born.dir/born.c.o.d -o CMakeFiles/born.dir/born.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/tools/manip/born.c /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed -Wl,--dependency-file=CMakeFiles/coulomb.dir/link.d CMakeFiles/coulomb.dir/coulomb.c.o -o ../bin/coulomb ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 99%] Built target coulomb make -f tools/python/CMakeFiles/_apbslib.dir/build.make tools/python/CMakeFiles/_apbslib.dir/depend make[3]: Entering directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' cd /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-56d3Iv/apbs-3.4.1 /build/apbs-56d3Iv/apbs-3.4.1/tools/python /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/DependInfo.cmake "--color=" 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-I/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-56d3Iv/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT tools/python/CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o -MF CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o.d -o CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o -c /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c: In function ‘parseInputFromString’: /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c:3656:15: error: implicit declaration of function ‘PyString_Size’; did you mean ‘PyMapping_Size’? [-Wimplicit-function-declaration] 3656 | bufsize = PyString_Size(string); | ^~~~~~~~~~~~~ | PyMapping_Size /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c:3661:23: error: implicit declaration of function ‘PyString_AsString’ [-Wimplicit-function-declaration] 3661 | Vio_bufTake(sock, PyString_AsString(string), bufsize); | ^~~~~~~~~~~~~~~~~ /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c:3661:23: error: passing argument 2 of ‘Vio_bufTake’ makes pointer from integer without a cast [-Wint-conversion] 3661 | Vio_bufTake(sock, PyString_AsString(string), bufsize); | ^~~~~~~~~~~~~~~~~~~~~~~~~ | | | int In file included from /usr/include/maloc/vsys.h:38, from /usr/include/maloc/maloc.h:40, from /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c:3258: /usr/include/maloc/vio.h:364:44: note: expected ‘char *’ but argument is of type ‘int’ 364 | VEXTERNC void Vio_bufTake(Vio *thee, char *buf, int bufsize); | ~~~~~~^~~ /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c: In function ‘getForces’: /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c:3819:10: error: implicit declaration of function ‘PyString_FromString’; did you mean ‘PyLong_FromString’? [-Wimplicit-function-declaration] 3819 | qf = PyString_FromString("qf"); | ^~~~~~~~~~~~~~~~~~~ | PyLong_FromString /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c:3819:8: error: assignment to ‘PyObject *’ {aka ‘struct _object *’} from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 3819 | qf = PyString_FromString("qf"); | ^ /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c:3820:8: error: assignment to ‘PyObject *’ {aka ‘struct _object *’} from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 3820 | db = PyString_FromString("db"); | ^ /build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c:3821:8: error: assignment to ‘PyObject *’ {aka ‘struct _object *’} from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 3821 | ib = PyString_FromString("ib"); | ^ make[3]: *** [tools/python/CMakeFiles/_apbslib.dir/build.make:82: tools/python/CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o] Error 1 make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make[2]: *** [CMakeFiles/Makefile2:1995: tools/python/CMakeFiles/_apbslib.dir/all] Error 2 make[2]: *** Waiting for unfinished jobs.... /usr/bin/x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/apbs-56d3Iv/apbs-3.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed -Wl,--dependency-file=CMakeFiles/born.dir/link.d CMakeFiles/born.dir/born.c.o -o ../bin/born ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/x86_64-linux-gnu/libumfpack.so /usr/lib/x86_64-linux-gnu/libspqr.so /usr/lib/x86_64-linux-gnu/libcholmod.so /usr/lib/x86_64-linux-gnu/libccolamd.so /usr/lib/x86_64-linux-gnu/libcamd.so /usr/lib/x86_64-linux-gnu/libcolamd.so /usr/lib/x86_64-linux-gnu/libamd.so -lm -ldl /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' [ 99%] Built target born make[2]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' make[1]: *** [Makefile:169: all] Error 2 make[1]: Leaving directory '/build/apbs-56d3Iv/apbs-3.4.1/obj-x86_64-linux-gnu' dh_auto_build: error: cd obj-x86_64-linux-gnu && make -j2 INSTALL="install --strip-program=true" VERBOSE=1 returned exit code 2 make: *** [debian/rules:21: binary] Error 25 dpkg-buildpackage: error: debian/rules binary subprocess failed with exit status 2 -------------------------------------------------------------------------------- Build finished at 2026-09-21T13:05:20Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup Mon, 21 Sep 2026 13:05:20 +0000 | +------------------------------------------------------------------------------+ Purging /build/apbs-56d3Iv Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died with exit 2) +------------------------------------------------------------------------------+ | Summary Mon, 21 Sep 2026 13:05:21 +0000 | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: full Build-Space: 237008 Build-Time: 100 Distribution: sid Fail-Stage: build Host Architecture: amd64 Install-Time: 32 Job: /srv/debomatic/incoming/apbs_3.4.1-7.dsc Machine Architecture: amd64 Package: apbs Package-Time: 142 Source-Version: 3.4.1-7 Space: 237008 Status: attempted Version: 3.4.1-7 -------------------------------------------------------------------------------- Finished at 2026-09-21T13:05:20Z Build needed 00:02:22, 237008k disk space