sbuild (Debian sbuild) 0.89.1 (28 April 2025) on carme.larted.org.uk +==============================================================================+ | estscan 3.0.3-6 (amd64) Sun, 17 Aug 2025 15:20:52 +0000 | +==============================================================================+ Package: estscan Version: 3.0.3-6 Source Version: 3.0.3-6 Distribution: perl-5.42-throwaway Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: full I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... +------------------------------------------------------------------------------+ | Chroot Setup Commands Sun, 17 Aug 2025 15:20:53 +0000 | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup estscan_3.0.3-6 perl-5.42-throwaway amd64 ---------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup estscan_3.0.3-6 perl-5.42-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- I: Setting up apt archive... +------------------------------------------------------------------------------+ | Update chroot Sun, 17 Aug 2025 15:20:53 +0000 | +------------------------------------------------------------------------------+ Get:1 file:/srv/reprepro perl-5.42 InRelease [3024 B] Get:1 file:/srv/reprepro perl-5.42 InRelease [3024 B] Get:2 file:/srv/reprepro perl-5.42/main amd64 Packages [547 kB] Get:3 http://deb.debian.org/debian unstable InRelease [216 kB] Get:4 http://deb.debian.org/debian sid InRelease [216 kB] Get:5 http://deb.debian.org/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:6 http://deb.debian.org/debian sid/main Sources.diff/Index [63.6 kB] Get:7 http://deb.debian.org/debian unstable/main amd64 Packages T-2025-08-17-1413.37-F-2025-08-16-2015.43.pdiff [102 kB] Get:7 http://deb.debian.org/debian unstable/main amd64 Packages T-2025-08-17-1413.37-F-2025-08-16-2015.43.pdiff [102 kB] Get:8 http://deb.debian.org/debian sid/main Sources T-2025-08-17-1413.37-F-2025-08-16-2015.43.pdiff [73.0 kB] Get:8 http://deb.debian.org/debian sid/main Sources T-2025-08-17-1413.37-F-2025-08-16-2015.43.pdiff [73.0 kB] Fetched 734 kB in 7s (107 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: binutils binutils-common binutils-x86-64-linux-gnu init-system-helpers libbinutils libctf-nobfd0 libctf0 libgprofng0 libidn2-0 libldap2 libsframe2 11 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 5687 kB/5881 kB of archives. After this operation, 7168 B of additional disk space will be used. Get:1 file:/srv/reprepro perl-5.42/main amd64 libldap2 amd64 2.6.10+dfsg-1+b1 [194 kB] Get:2 http://deb.debian.org/debian unstable/main amd64 init-system-helpers all 1.69 [39.3 kB] Get:3 http://deb.debian.org/debian unstable/main amd64 libgprofng0 amd64 2.45-4 [810 kB] Get:4 http://deb.debian.org/debian unstable/main amd64 libctf0 amd64 2.45-4 [89.7 kB] Get:5 http://deb.debian.org/debian unstable/main amd64 libctf-nobfd0 amd64 2.45-4 [157 kB] Get:6 http://deb.debian.org/debian unstable/main amd64 binutils-x86-64-linux-gnu amd64 2.45-4 [1042 kB] Get:7 http://deb.debian.org/debian unstable/main amd64 binutils amd64 2.45-4 [266 kB] Get:8 http://deb.debian.org/debian unstable/main amd64 libbinutils amd64 2.45-4 [539 kB] Get:9 http://deb.debian.org/debian unstable/main amd64 binutils-common amd64 2.45-4 [2556 kB] Get:10 http://deb.debian.org/debian unstable/main amd64 libsframe2 amd64 2.45-4 [79.5 kB] Get:11 http://deb.debian.org/debian unstable/main amd64 libidn2-0 amd64 2.3.8-3 [109 kB] Fetched 5687 kB in 0s (118 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14970 files and directories currently installed.) Preparing to unpack .../init-system-helpers_1.69_all.deb ... Unpacking init-system-helpers (1.69) over (1.68) ... Setting up init-system-helpers (1.69) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14971 files and directories currently installed.) Preparing to unpack .../0-libgprofng0_2.45-4_amd64.deb ... Unpacking libgprofng0:amd64 (2.45-4) over (2.45-3) ... Preparing to unpack .../1-libctf0_2.45-4_amd64.deb ... Unpacking libctf0:amd64 (2.45-4) over (2.45-3) ... Preparing to unpack .../2-libctf-nobfd0_2.45-4_amd64.deb ... Unpacking libctf-nobfd0:amd64 (2.45-4) over (2.45-3) ... Preparing to unpack .../3-binutils-x86-64-linux-gnu_2.45-4_amd64.deb ... Unpacking binutils-x86-64-linux-gnu (2.45-4) over (2.45-3) ... Preparing to unpack .../4-binutils_2.45-4_amd64.deb ... Unpacking binutils (2.45-4) over (2.45-3) ... Preparing to unpack .../5-libbinutils_2.45-4_amd64.deb ... Unpacking libbinutils:amd64 (2.45-4) over (2.45-3) ... Preparing to unpack .../6-binutils-common_2.45-4_amd64.deb ... Unpacking binutils-common:amd64 (2.45-4) over (2.45-3) ... Preparing to unpack .../7-libsframe2_2.45-4_amd64.deb ... Unpacking libsframe2:amd64 (2.45-4) over (2.45-3) ... Preparing to unpack .../8-libidn2-0_2.3.8-3_amd64.deb ... Unpacking libidn2-0:amd64 (2.3.8-3) over (2.3.8-2) ... Preparing to unpack .../9-libldap2_2.6.10+dfsg-1+b1_amd64.deb ... Unpacking libldap2:amd64 (2.6.10+dfsg-1+b1) over (2.6.10+dfsg-1) ... Setting up libsframe2:amd64 (2.45-4) ... Setting up binutils-common:amd64 (2.45-4) ... Setting up libctf-nobfd0:amd64 (2.45-4) ... Setting up libidn2-0:amd64 (2.3.8-3) ... Setting up libbinutils:amd64 (2.45-4) ... Setting up libldap2:amd64 (2.6.10+dfsg-1+b1) ... Setting up libctf0:amd64 (2.45-4) ... Setting up libgprofng0:amd64 (2.45-4) ... Setting up binutils-x86-64-linux-gnu (2.45-4) ... Setting up binutils (2.45-4) ... Processing triggers for libc-bin (2.41-12) ... +------------------------------------------------------------------------------+ | Fetch source files Sun, 17 Aug 2025 15:21:04 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/debomatic/incoming/estscan_3.0.3-6.dsc exists in /srv/debomatic/incoming; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Sun, 17 Aug 2025 15:21:04 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), gfortran, build-essential Filtered Build-Depends: debhelper-compat (= 13), gfortran, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/estscan-Q9cCD3/resolver-pbA0wl/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/build/estscan-Q9cCD3/resolver-pbA0wl/apt_archive ./ InRelease Get:2 copy:/build/estscan-Q9cCD3/resolver-pbA0wl/apt_archive ./ Release [609 B] Ign:3 copy:/build/estscan-Q9cCD3/resolver-pbA0wl/apt_archive ./ Release.gpg Get:4 copy:/build/estscan-Q9cCD3/resolver-pbA0wl/apt_archive ./ Sources [610 B] Get:5 copy:/build/estscan-Q9cCD3/resolver-pbA0wl/apt_archive ./ Packages [649 B] Fetched 1868 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base gfortran gfortran-14 gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu groff-base intltool-debian libarchive-zip-perl libdebhelper-perl libelf1t64 libfile-stripnondeterminism-perl libgfortran-14-dev libgfortran5 libmagic-mgc libmagic1t64 libpipeline1 libtool libuchardet0 libxml2-16 m4 man-db po-debconf sensible-utils Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev gnulib-l10n gfortran-multilib gfortran-doc gfortran-14-multilib gfortran-14-doc libcoarrays-dev groff libtool-doc gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base gfortran gfortran-14 gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu groff-base intltool-debian libarchive-zip-perl libdebhelper-perl libelf1t64 libfile-stripnondeterminism-perl libgfortran-14-dev libgfortran5 libmagic-mgc libmagic1t64 libpipeline1 libtool libuchardet0 libxml2-16 m4 man-db po-debconf sbuild-build-depends-main-dummy sensible-utils 0 upgraded, 35 newly installed, 0 to remove and 0 not upgraded. Need to get 24.2 MB of archives. After this operation, 86.5 MB of additional disk space will be used. Get:1 copy:/build/estscan-Q9cCD3/resolver-pbA0wl/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [860 B] Get:2 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.25 [25.0 kB] Get:3 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get:4 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get:5 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.46-5 [43.6 kB] Get:6 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get:7 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get:8 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get:9 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.41.1-1 [94.7 kB] Get:10 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:11 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get:12 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-8 [294 kB] Get:13 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3.1 [494 kB] Get:14 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get:15 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.17-4 [862 kB] Get:16 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.1-2 [770 kB] Get:17 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.25 [91.6 kB] Get:18 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-4 [539 kB] Get:19 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:20 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:21 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get:22 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get:23 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get:24 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:25 http://deb.debian.org/debian unstable/main amd64 libxml2-16 amd64 2.14.5+dfsg-0.1 [640 kB] Get:26 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get:27 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:28 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:29 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.25 [937 kB] Get:30 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 15.2.0-1 [862 kB] Get:31 http://deb.debian.org/debian unstable/main amd64 libgfortran-14-dev amd64 14.3.0-5 [879 kB] Get:32 http://deb.debian.org/debian unstable/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.3.0-5 [11.7 MB] Get:33 http://deb.debian.org/debian unstable/main amd64 gfortran-14 amd64 14.3.0-5 [15.2 kB] Get:34 http://deb.debian.org/debian unstable/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1 [1284 B] Get:35 http://deb.debian.org/debian unstable/main amd64 gfortran amd64 4:14.2.0-1 [1436 B] Preconfiguring packages ... Fetched 24.2 MB in 0s (172 MB/s) Selecting previously unselected package sensible-utils. (Reading database ... 14972 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.25_all.deb ... Unpacking sensible-utils (0.0.25) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.46-5_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-5_amd64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-2+b1_amd64.deb ... Unpacking gettext-base (0.23.1-2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-9_amd64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.41.1-1_amd64.deb ... Unpacking bsdextrautils (2.41.1-1) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.1-1_amd64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-8_amd64.deb ... Unpacking m4 (1.4.19-8) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... 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Selecting previously unselected package gettext. Preparing to unpack .../24-gettext_0.23.1-2+b1_amd64.deb ... Unpacking gettext (0.23.1-2+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../25-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../26-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../27-debhelper_13.25_all.deb ... Unpacking debhelper (13.25) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../28-libgfortran5_15.2.0-1_amd64.deb ... Unpacking libgfortran5:amd64 (15.2.0-1) ... Selecting previously unselected package libgfortran-14-dev:amd64. Preparing to unpack .../29-libgfortran-14-dev_14.3.0-5_amd64.deb ... Unpacking libgfortran-14-dev:amd64 (14.3.0-5) ... Selecting previously unselected package gfortran-14-x86-64-linux-gnu. Preparing to unpack .../30-gfortran-14-x86-64-linux-gnu_14.3.0-5_amd64.deb ... Unpacking gfortran-14-x86-64-linux-gnu (14.3.0-5) ... Selecting previously unselected package gfortran-14. Preparing to unpack .../31-gfortran-14_14.3.0-5_amd64.deb ... Unpacking gfortran-14 (14.3.0-5) ... Selecting previously unselected package gfortran-x86-64-linux-gnu. Preparing to unpack .../32-gfortran-x86-64-linux-gnu_4%3a14.2.0-1_amd64.deb ... Unpacking gfortran-x86-64-linux-gnu (4:14.2.0-1) ... Selecting previously unselected package gfortran. Preparing to unpack .../33-gfortran_4%3a14.2.0-1_amd64.deb ... Unpacking gfortran (4:14.2.0-1) ... Selecting previously unselected package sbuild-build-depends-main-dummy. Preparing to unpack .../34-sbuild-build-depends-main-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up bsdextrautils (2.41.1-1) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:amd64 (2.14.5+dfsg-0.1) ... Setting up libdebhelper-perl (13.25) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.19-8) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up autotools-dev (20240727.1) ... Setting up autopoint (0.23.1-2) ... Setting up libgfortran5:amd64 (15.2.0-1) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.25) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libgfortran-14-dev:amd64 (14.3.0-5) ... Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-2+b1) ... Setting up libtool (2.5.4-4) ... Setting up gfortran-14-x86-64-linux-gnu (14.3.0-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-9) ... Setting up gfortran-14 (14.3.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran-x86-64-linux-gnu (4:14.2.0-1) ... Setting up gfortran (4:14.2.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up debhelper (13.25) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.41-12) ... +------------------------------------------------------------------------------+ | Check architectures Sun, 17 Aug 2025 15:21:09 +0000 | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any) +------------------------------------------------------------------------------+ | Build environment Sun, 17 Aug 2025 15:21:09 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.25-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.25-1 (2025-04-25) amd64 (x86_64) Toolchain package versions: binutils_2.45-4 dpkg-dev_1.22.21 g++-14_14.3.0-5 gcc-14_14.3.0-5 libc6-dev_2.41-12 libstdc++-14-dev_14.3.0-5 libstdc++6_15.2.0-1 linux-libc-dev_6.12.38-1 Package versions: adduser_3.152 apt_3.1.4 autoconf_2.72-3.1 automake_1:1.17-4 autopoint_0.23.1-2 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.7 bash_5.2.37-2+b5 binutils_2.45-4 binutils-common_2.45-4 binutils-gold_2.44-2 binutils-gold-x86-64-linux-gnu_2.44-2 binutils-x86-64-linux-gnu_2.45-4 bsdextrautils_2.41.1-1 bsdutils_1:2.41.1-1 build-essential_12.12 bzip2_1.0.8-6 coreutils_9.7-3 cpp_4:14.2.0-1 cpp-14_14.3.0-5 cpp-14-x86-64-linux-gnu_14.3.0-5 cpp-x86-64-linux-gnu_4:14.2.0-1 dash_0.5.12-12 debconf_1.5.91 debhelper_13.25 debian-archive-keyring_2025.1 debianutils_5.23.2 dh-autoreconf_20 dh-strip-nondeterminism_1.14.1-2 diffutils_1:3.10-4 dirmngr_2.4.8-2 dpkg_1.22.21 dpkg-dev_1.22.21 dwz_0.15-1+b1 eatmydata_131-2 file_1:5.46-5 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.3.0-5 g++-14-x86-64-linux-gnu_14.3.0-5 g++-x86-64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.3.0-5 gcc-14-base_14.3.0-5 gcc-14-x86-64-linux-gnu_14.3.0-5 gcc-15-base_15.2.0-1 gcc-x86-64-linux-gnu_4:14.2.0-1 gettext_0.23.1-2+b1 gettext-base_0.23.1-2+b1 gfortran_4:14.2.0-1 gfortran-14_14.3.0-5 gfortran-14-x86-64-linux-gnu_14.3.0-5 gfortran-x86-64-linux-gnu_4:14.2.0-1 gnupg_2.4.8-2 gnupg-l10n_2.4.8-2 gpg_2.4.8-2 gpg-agent_2.4.8-2 gpgconf_2.4.8-2 gpgsm_2.4.8-2 grep_3.11-4 groff-base_1.23.0-9 gzip_1.13-1 hostname_3.25 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2+b1 libapt-pkg7.0_3.1.4 libarchive-zip-perl_1.68-1 libasan8_15.2.0-1 libassuan9_3.0.2-2 libatomic1_15.2.0-1 libattr1_1:2.5.2-3 libaudit-common_1:4.0.5-1 libaudit1_1:4.0.5-1 libbinutils_2.45-4 libblkid1_2.41.1-1 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libc-bin_2.41-12 libc-dev-bin_2.41-12 libc6_2.41-12 libc6-dev_2.41-12 libcap-ng0_0.8.5-4+b1 libcap2_1:2.75-10+b1 libcc1-0_15.2.0-1 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.45-4 libctf0_2.45-4 libdb5.3t64_5.3.28+dfsg2-9 libdebconfclient0_0.280 libdebhelper-perl_13.25 libdpkg-perl_1.22.21 libeatmydata1_131-2+b1 libelf1t64_0.192-4 libffi8_3.4.8-2 libfile-stripnondeterminism-perl_1.14.1-2 libgcc-14-dev_14.3.0-5 libgcc-s1_15.2.0-1 libgcrypt20_1.11.2-2 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgfortran-14-dev_14.3.0-5 libgfortran5_15.2.0-1 libgmp10_2:6.3.0+dfsg-3 libgnutls30t64_3.8.10-2 libgomp1_15.2.0-1 libgpg-error0_1.55-2 libgprofng0_2.45-4 libhogweed6t64_3.10.1-1 libhwasan0_15.2.0-1 libidn2-0_2.3.8-3 libisl23_0.27-1 libitm1_15.2.0-1 libjansson4_2.14-2+b3 libksba8_1.6.7-2+b1 liblastlog2-2_2.41.1-1 libldap2_2.6.10+dfsg-1+b1 liblsan0_15.2.0-1 liblz4-1_1.10.0-4 liblzma5_5.8.1-1 libmagic-mgc_1:5.46-5 libmagic1t64_1:5.46-5 libmd0_1.1.0-2+b1 libmount1_2.41.1-1 libmpc3_1.3.1-1+b3 libmpfr6_4.2.2-1 libncursesw6_6.5+20250216-2 libnettle8t64_3.10.1-1 libnpth0t64_1.8-3 libp11-kit0_0.25.5-3 libpam-modules_1.7.0-5 libpam-modules-bin_1.7.0-5 libpam-runtime_1.7.0-5 libpam0g_1.7.0-5 libpcre2-8-0_10.45-1 libperl5.40_5.40.1-6 libperl5.42_5.42.0-1 libpipeline1_1.5.8-1 libquadmath0_15.2.0-1 libreadline8t64_8.2-6 libsasl2-2_2.1.28+dfsg1-9 libsasl2-modules-db_2.1.28+dfsg1-9 libseccomp2_2.6.0-2 libselinux1_3.8.1-1 libsemanage-common_3.8.1-1 libsemanage2_3.8.1-1 libsepol2_3.8.1-1 libsframe2_2.45-4 libsmartcols1_2.41.1-1 libsqlite3-0_3.46.1-7 libssl3t64_3.5.2-1 libstdc++-14-dev_14.3.0-5 libstdc++6_15.2.0-1 libsystemd0_258~rc2-2 libtasn1-6_4.20.0-2 libtinfo6_6.5+20250216-2 libtool_2.5.4-4 libtsan2_15.2.0-1 libubsan1_15.2.0-1 libuchardet0_0.0.8-1+b2 libudev1_258~rc2-2 libunistring5_1.3-2 libuuid1_2.41.1-1 libxml2-16_2.14.5+dfsg-0.1 libxxhash0_0.8.3-2 libzstd1_1.5.7+dfsg-1 linux-libc-dev_6.12.38-1 login.defs_1:4.17.4-2 m4_1.4.19-8 make_4.4.1-2 man-db_2.13.1-1 mawk_1.3.4.20250131-1 ncurses-base_6.5+20250216-2 ncurses-bin_6.5+20250216-2 openssl-provider-legacy_3.5.2-1 passwd_1:4.17.4-2 patch_2.8-2 perl_5.42.0-1 perl-base_5.42.0-1 perl-modules-5.40_5.40.1-6 perl-modules-5.42_5.42.0-1 pinentry-curses_1.3.2-3 po-debconf_1.0.21+nmu1 readline-common_8.2-6 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.25 sqv_1.3.0-3 sysvinit-utils_3.14-4 tar_1.35+dfsg-3.1 util-linux_2.41.1-1 xz-utils_5.8.1-1 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build Sun, 17 Aug 2025 15:21:09 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: estscan Binary: estscan Architecture: any Version: 3.0.3-6 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: http://estscan.sourceforge.net/ Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/estscan Vcs-Git: https://salsa.debian.org/med-team/estscan.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), gfortran Package-List: estscan deb science optional arch=any Checksums-Sha1: 8af2128aaa02c50d1d3cfa75188fac038381975c 46412 estscan_3.0.3.orig.tar.gz 18c44f0c2cfd7a5b80b37b4e45850c8707132954 12984 estscan_3.0.3-6.debian.tar.xz Checksums-Sha256: 037dc8770681ed12406a789ea292462a4ce5d89b0e906a1a3340aa4debc71e2f 46412 estscan_3.0.3.orig.tar.gz 719a8477d3ee19a64e25df2a42a3800c64a04cd6064dc6ba671a17ce3b29b54f 12984 estscan_3.0.3-6.debian.tar.xz Files: c07284ad28a38050bab0c1b71bbd055a 46412 estscan_3.0.3.orig.tar.gz e881307c55d917a1654d0b5abd8e6cc8 12984 estscan_3.0.3-6.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEPpmlJvXcwMu/HO6mALrnSzQzafEFAmEaUHkUHG5wYXRyYTk3 NEBnbWFpbC5jb20ACgkQALrnSzQzafGdDhAAmb5BpFKWO2stQ0svvHsOCvskOhUx u2JivpJEyr/Vs9PwmW5gCDwMtFBFsX+yynIkYg1nj3oO8Fwu02KCpS9j+xHfEcAY AyZL0k6fKG1FnrMM5acfewnMCRdbtdc9e8qny9VjXAHnk8e5YWt+zBNlJ0HDSSu5 AhM/UNxPhnU4EJtnlH3c07VcladpXhWcDrEgcRQCH1vZVI98K+NW9wj6KA2XOcJF hxncyDv0d+Lt0kxaSnG+sWAN5CTiXXZh04qL9/GylD0TIftqokxet/j1mVkFDodb HZkYRJns3XfM/TFbvNDNfyjrSOFySR4J5ZAlN6Zgre+9Bg3h7rUasL9EI468O7oP 2xwS4e2+g3ABgKmiaetIW719F/l+ikgtFQwjw2AgpNEpcC0omqv1cepPTkylnpPW letUzyNTepk0jLYTI2TZcvWf2ZzaIhn8YicSReOTrGktG1q4IwPgObNHDuR/Bj12 BoOziCah87VlcteMRNcrm9vANjdCr3rOF2gsVrwPaEnb6N3SLqeFbSIS/FTup43u R5p4qcNxk/aoCermHNpvqEPCxgMQJ8FnqORp0S5D1eXBX+LTxJroYR4tTOx4zMyd OGwRErhYstnbCwUvTFAqkTeklIMJ12UQEDDslAIGsO6Wo1MAkNCJaiiLeqtEpzts EVDTDeIealY46uI= =+cXO -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./estscan_3.0.3-6.dsc: no acceptable signature found dpkg-source: info: extracting estscan in /build/estscan-Q9cCD3/estscan-3.0.3 dpkg-source: info: unpacking estscan_3.0.3.orig.tar.gz dpkg-source: info: unpacking estscan_3.0.3-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying Makfile.patch Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Timed Build Commands Sun, 17 Aug 2025 15:21:10 +0000 | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/starting-build-commands/no-network estscan_3.0.3-6 perl-5.42-throwaway amd64 ---------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/starting-build-commands/no-network estscan_3.0.3-6 perl-5.42-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LC_ALL=C.UTF-8 LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so LOGNAME=debomatic PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/build/estscan-Q9cCD3/estscan-3.0.3 SCHROOT_ALIAS_NAME=perl-5.42-throwaway-amd64-debomatic SCHROOT_CHROOT_NAME=perl-5.42-amd64-debomatic SCHROOT_COMMAND=env SCHROOT_GID=110 SCHROOT_GROUP=sbuild SCHROOT_SESSION_ID=perl-5.42-amd64-debomatic-c2ce6ee6-7016-415a-a67a-001ef4ca4ffd SCHROOT_UID=1002 SCHROOT_USER=debomatic SHELL=/bin/sh USER=debomatic dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -Zxz dpkg-buildpackage: info: source package estscan dpkg-buildpackage: info: source version 3.0.3-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Shruti Sridhar dpkg-source -Zxz --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_auto_clean make -j2 clean make[1]: Entering directory '/build/estscan-Q9cCD3/estscan-3.0.3' \rm -f *~ maskred makesmat estscan winsegshuffle *.o make[1]: Leaving directory '/build/estscan-Q9cCD3/estscan-3.0.3' dh_clean dpkg-source -Zxz -b . dpkg-source: info: using source format '3.0 (quilt)' dpkg-source: info: building estscan using existing ./estscan_3.0.3.orig.tar.gz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: building estscan in estscan_3.0.3-6.debian.tar.xz dpkg-source: info: building estscan in estscan_3.0.3-6.dsc debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j2 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/estscan-Q9cCD3/estscan-3.0.3' gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/estscan-Q9cCD3/estscan-3.0.3=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c maskred.c gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/estscan-Q9cCD3/estscan-3.0.3=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c makesmat.c maskred.c:124:33: warning: ‘bitValue’ is static but used in inline function ‘testBit’ which is not static 124 | { return(bitField[index >> 3] & bitValue[index & 7]); } | ^~~~~~~~ maskred.c:121:27: warning: ‘bitValue’ is static but used in inline function ‘setBit’ which is not static 121 | { bitField[index >> 3] |= bitValue[index & 7]; } | ^~~~~~~~ maskred.c: In function ‘mask_file’: maskred.c:203:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 203 | fgets(buf, 1024, stdin); | ^~~~~~~~~~~~~~~~~~~~~~~ maskred.c:210:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 210 | fgets(buf, 1024, stdin); | ^~~~~~~~~~~~~~~~~~~~~~~ maskred.c: At top level: maskred.c:161:13: warning: ‘printTuple’ defined but not used [-Wunused-function] 161 | static void printTuple(unsigned long index, int len) | ^~~~~~~~~~ makesmat.c: In function ‘count_tuples’: makesmat.c:306:5: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 306 | fgets(buf, 1024, stdin); | ^~~~~~~~~~~~~~~~~~~~~~~ makesmat.c:325:7: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 325 | fgets(buf, 1024, stdin); | ^~~~~~~~~~~~~~~~~~~~~~~ gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/estscan-Q9cCD3/estscan-3.0.3=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c estscan.c estscan.c: In function ‘Compute’: estscan.c:784:38: warning: variable ‘tmpScore’ set but not used [-Wunused-but-set-variable] 784 | int iCurr, bPrev, bScore, tmpPrev, tmpScore; | ^~~~~~~~ estscan.c:784:29: warning: variable ‘tmpPrev’ set but not used [-Wunused-but-set-variable] 784 | int iCurr, bPrev, bScore, tmpPrev, tmpScore; | ^~~~~~~ gfortran -g -O2 -ffile-prefix-map=/build/estscan-Q9cCD3/estscan-3.0.3=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -c winsegshuffle.f winsegshuffle.f:121:72: 121 | IF(J.GT.97.OR.J.LT.1) PAUSE | 1 Warning: Deleted feature: PAUSE statement at (1) gcc -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o maskred maskred.o -lm gcc -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o makesmat makesmat.o -lm gfortran -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o winsegshuffle winsegshuffle.o -lm gcc -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o estscan estscan.o -lm make[1]: Leaving directory '/build/estscan-Q9cCD3/estscan-3.0.3' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/estscan/ debian/rules override_dh_install make[1]: Entering directory '/build/estscan-Q9cCD3/estscan-3.0.3' dh_install set -e ; \ for pl in `grep -Rl '#!/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \ sed -i '1s?^#!/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' ${pl} ; \ done make[1]: Leaving directory '/build/estscan-Q9cCD3/estscan-3.0.3' dh_installdocs dh_installchangelogs dh_installexamples dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dwz: debian/estscan/usr/bin/estscan: DWARF compression not beneficial - old size 22102 new size 22180 dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/estscan/usr/bin/winsegshuffle was not linked against libgcc_s.so.1 (it uses none of the library's symbols) dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'estscan-dbgsym' in '../estscan-dbgsym_3.0.3-6_amd64.deb'. dpkg-deb: building package 'estscan' in '../estscan_3.0.3-6_amd64.deb'. dpkg-genbuildinfo -O../estscan_3.0.3-6_amd64.buildinfo dpkg-genchanges -O../estscan_3.0.3-6_amd64.changes dpkg-genchanges: info: not including original source code in upload dpkg-source -Zxz --after-build . dpkg-buildpackage: info: binary and diff upload (original source NOT included) -------------------------------------------------------------------------------- Build finished at 2025-08-17T15:21:15Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Sun, 17 Aug 2025 15:21:15 +0000 | +------------------------------------------------------------------------------+ estscan_3.0.3-6_amd64.changes: ------------------------------ Format: 1.8 Date: Mon, 16 Aug 2021 17:16:42 +0530 Source: estscan Binary: estscan estscan-dbgsym Architecture: source amd64 Version: 3.0.3-6 Distribution: perl-5.42-throwaway Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Shruti Sridhar Description: estscan - ORF-independent detector of coding DNA sequences Changes: estscan (3.0.3-6) unstable; urgency=medium . [ Shruti Sridhar ] * Team Upload. * Add test data * Add autopkgtests * Install docs Checksums-Sha1: f927b0e9e2952612ff594632b338b36fe86ce227 1051 estscan_3.0.3-6.dsc 60feb23a2fcb0cb70fade2dad36bf251525ed1c6 12992 estscan_3.0.3-6.debian.tar.xz 3b5d8f0feefe146d38ab06c7068becb7912067d2 60496 estscan-dbgsym_3.0.3-6_amd64.deb 79394d9695cdd7c5a0fb9f2816992e27478db063 5293 estscan_3.0.3-6_amd64.buildinfo eb53fd9eb9aa32e4b772df1c65467d92912099df 54168 estscan_3.0.3-6_amd64.deb Checksums-Sha256: e7a10daa5f5f1334f6320c93713aa5f42334087abf43beaea30a51e6f0bb7c04 1051 estscan_3.0.3-6.dsc f91dd1409d9ba0672aec3cb984d32379fc86eafd445975930d21160917067b55 12992 estscan_3.0.3-6.debian.tar.xz 85320f4d87a0149ef0b00bbd7a0e97323710eb7303f09abb60666ea66be51947 60496 estscan-dbgsym_3.0.3-6_amd64.deb a151d9026293285f41f1521c98ad79a5293bbfd5f5c16b59b44aad4e40048470 5293 estscan_3.0.3-6_amd64.buildinfo cbbb510b10ddc3bf90cca27838b9853308f24892b301fbfead5e4a70851f830a 54168 estscan_3.0.3-6_amd64.deb Files: 653473d121ba2a0c7f6dbf7d5eeaee8d 1051 science optional estscan_3.0.3-6.dsc 330fe6d86e58f709d2ea3dd799952ce9 12992 science optional estscan_3.0.3-6.debian.tar.xz 83d7f14389e200c74a4de98632400a84 60496 debug optional estscan-dbgsym_3.0.3-6_amd64.deb d5ad4d8e526ed3a1a843a794286b8e5d 5293 science optional estscan_3.0.3-6_amd64.buildinfo 2b104a3429a56d7b48672f9fa6d75932 54168 science optional estscan_3.0.3-6_amd64.deb +------------------------------------------------------------------------------+ | Buildinfo Sun, 17 Aug 2025 15:21:15 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: estscan Binary: estscan estscan-dbgsym Architecture: amd64 source Version: 3.0.3-6 Checksums-Md5: 653473d121ba2a0c7f6dbf7d5eeaee8d 1051 estscan_3.0.3-6.dsc 83d7f14389e200c74a4de98632400a84 60496 estscan-dbgsym_3.0.3-6_amd64.deb 2b104a3429a56d7b48672f9fa6d75932 54168 estscan_3.0.3-6_amd64.deb Checksums-Sha1: f927b0e9e2952612ff594632b338b36fe86ce227 1051 estscan_3.0.3-6.dsc 3b5d8f0feefe146d38ab06c7068becb7912067d2 60496 estscan-dbgsym_3.0.3-6_amd64.deb eb53fd9eb9aa32e4b772df1c65467d92912099df 54168 estscan_3.0.3-6_amd64.deb Checksums-Sha256: e7a10daa5f5f1334f6320c93713aa5f42334087abf43beaea30a51e6f0bb7c04 1051 estscan_3.0.3-6.dsc 85320f4d87a0149ef0b00bbd7a0e97323710eb7303f09abb60666ea66be51947 60496 estscan-dbgsym_3.0.3-6_amd64.deb cbbb510b10ddc3bf90cca27838b9853308f24892b301fbfead5e4a70851f830a 54168 estscan_3.0.3-6_amd64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sun, 17 Aug 2025 15:21:14 +0000 Build-Path: /build/estscan-Q9cCD3/estscan-3.0.3 Build-Tainted-By: usr-local-has-programs Installed-Build-Depends: autoconf (= 2.72-3.1), automake (= 1:1.17-4), autopoint (= 0.23.1-2), autotools-dev (= 20240727.1), base-files (= 14), base-passwd (= 3.6.7), bash (= 5.2.37-2+b5), binutils (= 2.45-4), binutils-common (= 2.45-4), binutils-x86-64-linux-gnu (= 2.45-4), bsdextrautils (= 2.41.1-1), bsdutils (= 1:2.41.1-1), build-essential (= 12.12), bzip2 (= 1.0.8-6), coreutils (= 9.7-3), cpp (= 4:14.2.0-1), cpp-14 (= 14.3.0-5), cpp-14-x86-64-linux-gnu (= 14.3.0-5), cpp-x86-64-linux-gnu (= 4:14.2.0-1), dash (= 0.5.12-12), debconf (= 1.5.91), debhelper (= 13.25), debianutils (= 5.23.2), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.1-2), diffutils (= 1:3.10-4), dpkg (= 1.22.21), dpkg-dev (= 1.22.21), dwz (= 0.15-1+b1), file (= 1:5.46-5), findutils (= 4.10.0-3), g++ (= 4:14.2.0-1), g++-14 (= 14.3.0-5), g++-14-x86-64-linux-gnu (= 14.3.0-5), g++-x86-64-linux-gnu (= 4:14.2.0-1), gcc (= 4:14.2.0-1), gcc-14 (= 14.3.0-5), gcc-14-base (= 14.3.0-5), gcc-14-x86-64-linux-gnu (= 14.3.0-5), gcc-15-base (= 15.2.0-1), gcc-x86-64-linux-gnu (= 4:14.2.0-1), gettext (= 0.23.1-2+b1), gettext-base (= 0.23.1-2+b1), gfortran (= 4:14.2.0-1), gfortran-14 (= 14.3.0-5), gfortran-14-x86-64-linux-gnu (= 14.3.0-5), gfortran-x86-64-linux-gnu (= 4:14.2.0-1), grep (= 3.11-4), groff-base (= 1.23.0-9), gzip (= 1.13-1), hostname (= 3.25), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-2+b1), libarchive-zip-perl (= 1.68-1), libasan8 (= 15.2.0-1), libatomic1 (= 15.2.0-1), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.0.5-1), libaudit1 (= 1:4.0.5-1), libbinutils (= 2.45-4), libblkid1 (= 2.41.1-1), libbz2-1.0 (= 1.0.8-6), libc-bin (= 2.41-12), libc-dev-bin (= 2.41-12), libc6 (= 2.41-12), libc6-dev (= 2.41-12), libcap-ng0 (= 0.8.5-4+b1), libcap2 (= 1:2.75-10+b1), libcc1-0 (= 15.2.0-1), libcrypt-dev (= 1:4.4.38-1), libcrypt1 (= 1:4.4.38-1), libctf-nobfd0 (= 2.45-4), libctf0 (= 2.45-4), libdb5.3t64 (= 5.3.28+dfsg2-9), libdebconfclient0 (= 0.280), libdebhelper-perl (= 13.25), libdpkg-perl (= 1.22.21), libelf1t64 (= 0.192-4), libfile-stripnondeterminism-perl (= 1.14.1-2), libgcc-14-dev (= 14.3.0-5), libgcc-s1 (= 15.2.0-1), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgfortran-14-dev (= 14.3.0-5), libgfortran5 (= 15.2.0-1), libgmp10 (= 2:6.3.0+dfsg-3), libgomp1 (= 15.2.0-1), libgprofng0 (= 2.45-4), libhwasan0 (= 15.2.0-1), libisl23 (= 0.27-1), libitm1 (= 15.2.0-1), libjansson4 (= 2.14-2+b3), liblastlog2-2 (= 2.41.1-1), liblsan0 (= 15.2.0-1), liblzma5 (= 5.8.1-1), libmagic-mgc (= 1:5.46-5), libmagic1t64 (= 1:5.46-5), libmd0 (= 1.1.0-2+b1), libmount1 (= 2.41.1-1), libmpc3 (= 1.3.1-1+b3), libmpfr6 (= 4.2.2-1), libpam-modules (= 1.7.0-5), libpam-modules-bin (= 1.7.0-5), libpam-runtime (= 1.7.0-5), libpam0g (= 1.7.0-5), libpcre2-8-0 (= 10.45-1), libperl5.42 (= 5.42.0-1), libpipeline1 (= 1.5.8-1), libquadmath0 (= 15.2.0-1), libseccomp2 (= 2.6.0-2), libselinux1 (= 3.8.1-1), libsframe2 (= 2.45-4), libsmartcols1 (= 2.41.1-1), libsqlite3-0 (= 3.46.1-7), libssl3t64 (= 3.5.2-1), libstdc++-14-dev (= 14.3.0-5), libstdc++6 (= 15.2.0-1), libsystemd0 (= 258~rc2-2), libtinfo6 (= 6.5+20250216-2), libtool (= 2.5.4-4), libtsan2 (= 15.2.0-1), libubsan1 (= 15.2.0-1), libuchardet0 (= 0.0.8-1+b2), libudev1 (= 258~rc2-2), libunistring5 (= 1.3-2), libuuid1 (= 2.41.1-1), libxml2-16 (= 2.14.5+dfsg-0.1), libzstd1 (= 1.5.7+dfsg-1), linux-libc-dev (= 6.12.38-1), m4 (= 1.4.19-8), make (= 4.4.1-2), man-db (= 2.13.1-1), mawk (= 1.3.4.20250131-1), ncurses-base (= 6.5+20250216-2), ncurses-bin (= 6.5+20250216-2), openssl-provider-legacy (= 3.5.2-1), patch (= 2.8-2), perl (= 5.42.0-1), perl-base (= 5.42.0-1), perl-modules-5.42 (= 5.42.0-1), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.25), sysvinit-utils (= 3.14-4), tar (= 1.35+dfsg-3.1), util-linux (= 2.41.1-1), xz-utils (= 5.8.1-1), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="parallel=2" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" LD_LIBRARY_PATH="/usr/lib/libeatmydata" SOURCE_DATE_EPOCH="1629114402" +------------------------------------------------------------------------------+ | Package contents Sun, 17 Aug 2025 15:21:15 +0000 | +------------------------------------------------------------------------------+ estscan-dbgsym_3.0.3-6_amd64.deb -------------------------------- new Debian package, version 2.0. size 60496 bytes: control archive=744 bytes. 493 bytes, 12 lines control 508 bytes, 5 lines md5sums Package: estscan-dbgsym Source: estscan Version: 3.0.3-6 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 120 Depends: estscan (= 3.0.3-6) Section: debug Priority: optional Description: debug symbols for estscan Build-Ids: 65449b79181ece992542fee00f6feba575769e56 81ead4db5ce9ff5317d52a2213e749f11e499237 a1b5449db077c3f68db8fd6e7cbea2ad3cb77687 a70f252b2b712950f3c8e0f7dc72ee6118351dc6 drwxr-xr-x root/root 0 2021-08-16 11:46 ./ drwxr-xr-x root/root 0 2021-08-16 11:46 ./usr/ drwxr-xr-x root/root 0 2021-08-16 11:46 ./usr/lib/ drwxr-xr-x root/root 0 2021-08-16 11:46 ./usr/lib/debug/ drwxr-xr-x root/root 0 2021-08-16 11:46 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2021-08-16 11:46 ./usr/lib/debug/.build-id/65/ -rw-r--r-- root/root 44880 2021-08-16 11:46 ./usr/lib/debug/.build-id/65/449b79181ece992542fee00f6feba575769e56.debug drwxr-xr-x root/root 0 2021-08-16 11:46 ./usr/lib/debug/.build-id/81/ -rw-r--r-- root/root 16440 2021-08-16 11:46 ./usr/lib/debug/.build-id/81/ead4db5ce9ff5317d52a2213e749f11e499237.debug drwxr-xr-x root/root 0 2021-08-16 11:46 ./usr/lib/debug/.build-id/a1/ -rw-r--r-- root/root 26048 2021-08-16 11:46 ./usr/lib/debug/.build-id/a1/b5449db077c3f68db8fd6e7cbea2ad3cb77687.debug drwxr-xr-x root/root 0 2021-08-16 11:46 ./usr/lib/debug/.build-id/a7/ -rw-r--r-- root/root 15016 2021-08-16 11:46 ./usr/lib/debug/.build-id/a7/0f252b2b712950f3c8e0f7dc72ee6118351dc6.debug drwxr-xr-x root/root 0 2021-08-16 11:46 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2021-08-16 11:46 ./usr/lib/debug/.dwz/x86_64-linux-gnu/ -rw-r--r-- root/root 2712 2021-08-16 11:46 ./usr/lib/debug/.dwz/x86_64-linux-gnu/estscan.debug drwxr-xr-x root/root 0 2021-08-16 11:46 ./usr/share/ drwxr-xr-x root/root 0 2021-08-16 11:46 ./usr/share/doc/ lrwxrwxrwx root/root 0 2021-08-16 11:46 ./usr/share/doc/estscan-dbgsym -> estscan estscan_3.0.3-6_amd64.deb ------------------------- new Debian package, version 2.0. size 54168 bytes: control archive=1476 bytes. 1288 bytes, 24 lines control 934 bytes, 15 lines md5sums Package: estscan Version: 3.0.3-6 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 261 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libgfortran5 (>= 8), perl:any Section: science Priority: optional Homepage: http://estscan.sourceforge.net/ Description: ORF-independent detector of coding DNA sequences ESTScan is a program that can detect coding regions in DNA sequences, even if they are of low quality. ESTScan will also detect and correct sequencing errors that lead to frameshifts. ESTScan is not a gene prediction program , nor is it an open reading frame detector. In fact, its strength lies in the fact that it does not require an open reading frame to detect a coding region. As a result, the program may miss a few translated amino acids at either the N or the C terminus, but will detect coding regions with high selectivity and sensitivity. . ESTScan takes advantages of the bias in hexanucleotide usage found in coding regions relative to non-coding regions. This bias is formalized as an inhomogeneous 3-periodic fifth-order Hidden Markov Model (HMM). Additionally, the HMM of ESTScan has been extended to allows insertions and deletions when these improve the coding region statistics. drwxr-xr-x root/root 0 2021-08-16 11:46 ./ drwxr-xr-x root/root 0 2021-08-16 11:46 ./usr/ drwxr-xr-x root/root 0 2021-08-16 11:46 ./usr/bin/ -rwxr-xr-x root/root 38992 2021-08-16 11:46 ./usr/bin/estscan -rwxr-xr-x root/root 25411 2021-08-16 11:46 ./usr/bin/evaluate_model -rwxr-xr-x root/root 18833 2021-08-16 11:46 ./usr/bin/extract_EST -rwxr-xr-x root/root 16560 2021-08-16 11:46 ./usr/bin/extract_UG_EST -rwxr-xr-x root/root 22760 2021-08-16 11:46 ./usr/bin/makesmat -rwxr-xr-x root/root 14568 2021-08-16 11:46 ./usr/bin/maskred -rwxr-xr-x root/root 18178 2021-08-16 11:46 ./usr/bin/prepare_data -rwxr-xr-x root/root 18664 2021-08-16 11:46 ./usr/bin/winsegshuffle drwxr-xr-x root/root 0 2021-08-16 11:46 ./usr/share/ drwxr-xr-x root/root 0 2021-08-16 11:46 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-08-16 11:46 ./usr/share/doc/estscan/ -rw-r--r-- root/root 669 2021-08-16 11:46 ./usr/share/doc/estscan/README.test -rw-r--r-- root/root 750 2021-08-16 11:46 ./usr/share/doc/estscan/changelog.Debian.gz -rw-r--r-- root/root 6100 2021-08-16 11:46 ./usr/share/doc/estscan/copyright drwxr-xr-x root/root 0 2021-08-16 11:46 ./usr/share/doc/estscan/examples/ -rw-r--r-- root/root 59182 2021-08-16 11:46 ./usr/share/doc/estscan/examples/Dr.smat -rw-r--r-- root/root 204 2021-08-16 11:46 ./usr/share/doc/estscan/examples/sequence.fasta -rw-r--r-- root/root 381 2021-08-16 11:46 ./usr/share/doc/estscan/run-unit-test drwxr-xr-x root/root 0 2021-08-16 11:46 ./usr/share/perl5/ -rw-r--r-- root/root 8714 2006-12-19 16:01 ./usr/share/perl5/build_model_utils.pl +------------------------------------------------------------------------------+ | Post Build Sun, 17 Aug 2025 15:21:16 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Sun, 17 Aug 2025 15:21:16 +0000 | +------------------------------------------------------------------------------+ Purging /build/estscan-Q9cCD3 Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Sun, 17 Aug 2025 15:21:17 +0000 | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: full Build-Space: 1644 Build-Time: 5 Distribution: perl-5.42-throwaway Host Architecture: amd64 Install-Time: 5 Job: /srv/debomatic/incoming/estscan_3.0.3-6.dsc Machine Architecture: amd64 Package: estscan Package-Time: 23 Source-Version: 3.0.3-6 Space: 1644 Status: successful Version: 3.0.3-6 -------------------------------------------------------------------------------- Finished at 2025-08-17T15:21:15Z Build needed 00:00:23, 1644k disk space