sbuild (Debian sbuild) 0.89.1 (28 April 2025) on carme.larted.org.uk +==============================================================================+ | minc-tools 2.3.00+dfsg-12 (amd64) Tue, 01 Jul 2025 08:44:27 +0000 | +==============================================================================+ Package: minc-tools Version: 2.3.00+dfsg-12 Source Version: 2.3.00+dfsg-12 Distribution: perl-5.40-throwaway Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: full I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... +------------------------------------------------------------------------------+ | Chroot Setup Commands Tue, 01 Jul 2025 08:44:28 +0000 | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup minc-tools_2.3.00+dfsg-12 perl-5.40-throwaway amd64 -------------------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/chroot-setup-commands/dpkg-speedup minc-tools_2.3.00+dfsg-12 perl-5.40-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- I: Setting up apt archive... +------------------------------------------------------------------------------+ | Update chroot Tue, 01 Jul 2025 08:44:29 +0000 | +------------------------------------------------------------------------------+ Get:1 file:/srv/reprepro perl-5.40 InRelease [3042 B] Get:2 http://deb.debian.org/debian unstable InRelease [208 kB] Get:1 file:/srv/reprepro perl-5.40 InRelease [3042 B] Get:3 http://deb.debian.org/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://deb.debian.org/debian unstable/main amd64 Packages T-2025-07-01-0804.31-F-2025-07-01-0804.31.pdiff [796 B] Get:4 http://deb.debian.org/debian unstable/main amd64 Packages T-2025-07-01-0804.31-F-2025-07-01-0804.31.pdiff [796 B] Get:5 http://localhost:3142/debian sid InRelease [208 kB] Get:6 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:7 http://localhost:3142/debian sid/main Sources T-2025-07-01-0804.31-F-2025-07-01-0804.31.pdiff [901 B] Get:7 http://localhost:3142/debian sid/main Sources T-2025-07-01-0804.31-F-2025-07-01-0804.31.pdiff [901 B] Fetched 545 kB in 6s (88.3 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files Tue, 01 Jul 2025 08:44:38 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/debomatic/incoming/minc-tools_2.3.00+dfsg-12.dsc exists in /srv/debomatic/incoming; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Tue, 01 Jul 2025 08:44:38 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), cmake, bison, flex, libminc-dev, libnifti2-dev, libnetcdf-dev, zlib1g-dev, texlive-latex-base, libhdf5-dev, debhelper, build-essential Filtered Build-Depends: debhelper-compat (= 13), cmake, bison, flex, libminc-dev, libnifti2-dev, libnetcdf-dev, zlib1g-dev, texlive-latex-base, libhdf5-dev, debhelper, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/minc-tools-bN2Zlc/resolver-trGUQj/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/build/minc-tools-bN2Zlc/resolver-trGUQj/apt_archive ./ InRelease Get:2 copy:/build/minc-tools-bN2Zlc/resolver-trGUQj/apt_archive ./ Release [609 B] Ign:3 copy:/build/minc-tools-bN2Zlc/resolver-trGUQj/apt_archive ./ Release.gpg Get:4 copy:/build/minc-tools-bN2Zlc/resolver-trGUQj/apt_archive ./ Sources [719 B] Get:5 copy:/build/minc-tools-bN2Zlc/resolver-trGUQj/apt_archive ./ Packages [758 B] Fetched 2086 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bison bsdextrautils cmake cmake-data comerr-dev debhelper dh-autoreconf dh-strip-nondeterminism dwz file flex fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lmodern gettext gettext-base groff-base hdf5-helpers intltool-debian krb5-multidev libaec-dev libaec0 libarchive-zip-perl libarchive13t64 libbrotli-dev libbrotli1 libcairo2 libcom-err2 libcurl3t64-gnutls libcurl4-gnutls-dev libcurl4t64 libdebhelper-perl libelf1t64 libevent-2.1-7t64 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgfortran5 libglib2.0-0t64 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 libgnutls-openssl27t64 libgnutls28-dev libgraphite2-3 libgssapi-krb5-2 libgssrpc4t64 libharfbuzz0b libhdf5-310 libhdf5-cpp-310 libhdf5-dev libhdf5-fortran-310 libhdf5-hl-310 libhdf5-hl-cpp-310 libhdf5-hl-fortran-310 libice6 libicu76 libidn2-dev libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjsoncpp26 libk5crypto3 libkadm5clnt-mit12 libkadm5srv-mit12 libkdb5-10t64 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5-dev libkrb5support0 libldap-dev libmagic-mgc libmagic1t64 libminc-dev libminc2-5.3.0t64 libmpfi0 libnetcdf-dev libnetcdf22 libnghttp2-14 libnghttp2-dev libnghttp3-9 libnghttp3-dev libngtcp2-16 libngtcp2-crypto-gnutls-dev libngtcp2-crypto-gnutls8 libngtcp2-dev libnifti2-2 libnifti2-dev libnifticdf-dev libnifticdf2 libniftiio-dev libniftiio2t64 libp11-kit-dev libpaper-utils libpaper2 libpipeline1 libpixman-1-0 libpkgconf3 libpng16-16t64 libpotrace0 libproc2-0 libpsl-dev libpsl5t64 libptexenc1 librhash1 librtmp-dev librtmp1 libsm6 libssh2-1-dev libssh2-1t64 libssl-dev libsynctex2 libsz2 libtasn1-6-dev libteckit0 libtexlua53-5 libtext-charwidth-perl libtext-wrapi18n-perl libtool libuchardet0 libunbound8 libuv1t64 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2 libxml2-dev libxmu6 libxpm4 libxrender1 libxt6t64 libznz-dev libznz3 libzstd-dev libzzip-0-13t64 m4 man-db nettle-dev pkgconf pkgconf-bin po-debconf procps sensible-utils t1utils tex-common texlive-base texlive-binaries texlive-latex-base ucf x11-common xdg-utils zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc bison-doc cmake-doc cmake-format elpa-cmake-mode ninja-build doc-base dh-make flex-doc gettext-doc libasprintf-dev libgettextpo-dev gnulib-l10n groff krb5-doc lrzip libcurl4-doc libidn-dev low-memory-monitor gmp-doc libgmp10-doc libmpfr-dev dns-root-data gnutls-bin gnutls-doc krb5-user libhdf5-doc libmpfi-doc netcdf-bin netcdf-doc libnghttp2-doc p11-kit-doc libssl-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl ghostscript gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec texlive-binaries-sse2 hintview texlive-latex-base-doc wp2latex Recommended packages: libfl-dev curl | wget | lynx ca-certificates libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales publicsuffix libtasn1-doc libltdl-dev libmail-sendmail-perl psmisc linux-sysctl-defaults lmodern dvisvgm libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autopoint autotools-dev bison bsdextrautils cmake cmake-data comerr-dev debhelper dh-autoreconf dh-strip-nondeterminism dwz file flex fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lmodern gettext gettext-base groff-base hdf5-helpers intltool-debian krb5-multidev libaec-dev libaec0 libarchive-zip-perl libarchive13t64 libbrotli-dev libbrotli1 libcairo2 libcom-err2 libcurl3t64-gnutls libcurl4-gnutls-dev libcurl4t64 libdebhelper-perl libelf1t64 libevent-2.1-7t64 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgfortran5 libglib2.0-0t64 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 libgnutls-openssl27t64 libgnutls28-dev libgraphite2-3 libgssapi-krb5-2 libgssrpc4t64 libharfbuzz0b libhdf5-310 libhdf5-cpp-310 libhdf5-dev libhdf5-fortran-310 libhdf5-hl-310 libhdf5-hl-cpp-310 libhdf5-hl-fortran-310 libice6 libicu76 libidn2-dev libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjsoncpp26 libk5crypto3 libkadm5clnt-mit12 libkadm5srv-mit12 libkdb5-10t64 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5-dev libkrb5support0 libldap-dev libmagic-mgc libmagic1t64 libminc-dev libminc2-5.3.0t64 libmpfi0 libnetcdf-dev libnetcdf22 libnghttp2-14 libnghttp2-dev libnghttp3-9 libnghttp3-dev libngtcp2-16 libngtcp2-crypto-gnutls-dev libngtcp2-crypto-gnutls8 libngtcp2-dev libnifti2-2 libnifti2-dev libnifticdf-dev libnifticdf2 libniftiio-dev libniftiio2t64 libp11-kit-dev libpaper-utils libpaper2 libpipeline1 libpixman-1-0 libpkgconf3 libpng16-16t64 libpotrace0 libproc2-0 libpsl-dev libpsl5t64 libptexenc1 librhash1 librtmp-dev librtmp1 libsm6 libssh2-1-dev libssh2-1t64 libssl-dev libsynctex2 libsz2 libtasn1-6-dev libteckit0 libtexlua53-5 libtext-charwidth-perl libtext-wrapi18n-perl libtool libuchardet0 libunbound8 libuv1t64 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2 libxml2-dev libxmu6 libxpm4 libxrender1 libxt6t64 libznz-dev libznz3 libzstd-dev libzzip-0-13t64 m4 man-db nettle-dev pkgconf pkgconf-bin po-debconf procps sbuild-build-depends-main-dummy sensible-utils t1utils tex-common texlive-base texlive-binaries texlive-latex-base ucf x11-common xdg-utils zlib1g-dev 0 upgraded, 167 newly installed, 0 to remove and 0 not upgraded. Need to get 108 MB/108 MB of archives. After this operation, 362 MB of additional disk space will be used. Get:1 file:/srv/reprepro perl-5.40/main amd64 libtext-charwidth-perl amd64 0.04-11+b5 [9444 B] Get:2 file:/srv/reprepro perl-5.40/main amd64 libldap-dev amd64 2.6.10+dfsg-1+b1 [312 kB] Get:3 copy:/build/minc-tools-bN2Zlc/resolver-trGUQj/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [920 B] Get:4 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-8 [294 kB] Get:5 http://deb.debian.org/debian unstable/main amd64 flex amd64 2.6.4-8.2+b4 [423 kB] Get:6 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-8 [65.4 kB] Get:7 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-8 [881 kB] Get:8 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.25 [25.0 kB] Get:9 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get:10 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get:11 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.46-5 [43.6 kB] Get:12 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.1-2 [243 kB] Get:13 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get:14 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get:15 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.41-5 [94.6 kB] Get:16 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:17 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get:18 http://deb.debian.org/debian unstable/main amd64 libtext-wrapi18n-perl all 0.06-10 [8808 B] Get:19 http://deb.debian.org/debian unstable/main amd64 ucf all 3.0052 [43.3 kB] Get:20 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3.1 [494 kB] Get:21 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get:22 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.17-4 [862 kB] Get:23 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.1-2 [770 kB] Get:24 http://deb.debian.org/debian unstable/main amd64 bison amd64 2:3.8.2+dfsg-1+b2 [1170 kB] Get:25 http://deb.debian.org/debian unstable/main amd64 cmake-data all 3.31.6-2 [2268 kB] Get:26 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-1 [698 kB] Get:27 http://deb.debian.org/debian unstable/main amd64 libarchive13t64 amd64 3.7.4-3 [349 kB] Get:28 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b7 [307 kB] Get:29 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-5 [33.0 kB] Get:30 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.2-3+b1 [25.0 kB] Get:31 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-5 [81.5 kB] Get:32 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-6 [9456 B] Get:33 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-5 [326 kB] Get:34 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-5 [138 kB] Get:35 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1.1 [76.0 kB] Get:36 http://deb.debian.org/debian unstable/main amd64 libnghttp3-9 amd64 1.8.0-1 [67.7 kB] Get:37 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get:38 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get:39 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get:40 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.14.1-2 [391 kB] Get:41 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.7.1-1 [108 kB] Get:42 http://deb.debian.org/debian unstable/main amd64 libjsoncpp26 amd64 1.9.6-3 [81.7 kB] Get:43 http://deb.debian.org/debian unstable/main amd64 librhash1 amd64 1.4.6-1 [137 kB] Get:44 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.50.0-2 [154 kB] Get:45 http://deb.debian.org/debian unstable/main amd64 cmake amd64 3.31.6-2 [12.0 MB] Get:46 http://deb.debian.org/debian unstable/main amd64 comerr-dev amd64 2.1-1.47.2-3+b1 [56.7 kB] Get:47 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.24.2 [90.9 kB] Get:48 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-4 [539 kB] Get:49 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:50 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:51 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get:52 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get:53 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get:54 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:55 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.1-2 [1680 kB] Get:56 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:57 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:58 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.24.2 [919 kB] Get:59 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get:60 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get:61 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-2.3 [318 kB] Get:62 http://deb.debian.org/debian unstable/main amd64 fonts-lmodern all 2.005-1 [4540 kB] Get:63 http://deb.debian.org/debian unstable/main amd64 hdf5-helpers amd64 1.14.5+repack-3 [26.6 kB] Get:64 http://deb.debian.org/debian unstable/main amd64 libgssrpc4t64 amd64 1.21.3-5 [60.0 kB] Get:65 http://deb.debian.org/debian unstable/main amd64 libkadm5clnt-mit12 amd64 1.21.3-5 [42.5 kB] Get:66 http://deb.debian.org/debian unstable/main amd64 libkdb5-10t64 amd64 1.21.3-5 [42.6 kB] Get:67 http://deb.debian.org/debian unstable/main amd64 libkadm5srv-mit12 amd64 1.21.3-5 [54.2 kB] Get:68 http://deb.debian.org/debian unstable/main amd64 krb5-multidev amd64 1.21.3-5 [126 kB] Get:69 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB] Get:70 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B] Get:71 http://deb.debian.org/debian unstable/main amd64 libaec-dev amd64 1.1.3-1+b1 [21.5 kB] Get:72 http://deb.debian.org/debian unstable/main amd64 libbrotli-dev amd64 1.1.0-2+b7 [316 kB] Get:73 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.48-1 [282 kB] Get:74 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get:75 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-2.3 [392 kB] Get:76 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB] Get:77 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get:78 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] Get:79 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get:80 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.12-1 [343 kB] Get:81 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.12-1 [815 kB] Get:82 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Get:83 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get:84 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB] Get:85 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.12-1 [27.9 kB] Get:86 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.4-1+b1 [538 kB] Get:87 http://deb.debian.org/debian unstable/main amd64 libngtcp2-16 amd64 1.11.0-1 [131 kB] Get:88 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.11.0-1 [29.3 kB] Get:89 http://deb.debian.org/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.14.1-2 [384 kB] Get:90 http://deb.debian.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10+b1 [182 kB] Get:91 http://deb.debian.org/debian unstable/main amd64 libunbound8 amd64 1.22.0-1+b1 [598 kB] Get:92 http://deb.debian.org/debian unstable/main amd64 libgnutls-dane0t64 amd64 3.8.9-2 [455 kB] Get:93 http://deb.debian.org/debian unstable/main amd64 libgnutls-openssl27t64 amd64 3.8.9-2 [455 kB] Get:94 http://deb.debian.org/debian unstable/main amd64 libidn2-dev amd64 2.3.8-2 [103 kB] Get:95 http://deb.debian.org/debian unstable/main amd64 libp11-kit-dev amd64 0.25.5-3 [208 kB] Get:96 http://deb.debian.org/debian unstable/main amd64 libtasn1-6-dev amd64 4.20.0-2 [99.2 kB] Get:97 http://deb.debian.org/debian unstable/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-3 [329 kB] Get:98 http://deb.debian.org/debian unstable/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-3 [642 kB] Get:99 http://deb.debian.org/debian unstable/main amd64 nettle-dev amd64 3.10.1-1 [1318 kB] Get:100 http://deb.debian.org/debian unstable/main amd64 libgnutls28-dev amd64 3.8.9-2 [1401 kB] Get:101 http://deb.debian.org/debian unstable/main amd64 libkrb5-dev amd64 1.21.3-5 [16.1 kB] Get:102 http://deb.debian.org/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] Get:103 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Get:104 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] Get:105 http://deb.debian.org/debian unstable/main amd64 libnghttp2-dev amd64 1.64.0-1.1 [116 kB] Get:106 http://deb.debian.org/debian unstable/main amd64 libnghttp3-dev amd64 1.8.0-1 [91.3 kB] Get:107 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls-dev amd64 1.11.0-1 [34.0 kB] Get:108 http://deb.debian.org/debian unstable/main amd64 libngtcp2-dev amd64 1.11.0-1 [179 kB] Get:109 http://deb.debian.org/debian unstable/main amd64 libpsl-dev amd64 0.21.2-1.1+b1 [77.6 kB] Get:110 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get:111 http://deb.debian.org/debian unstable/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-2+b5 [68.0 kB] Get:112 http://deb.debian.org/debian unstable/main amd64 libssl-dev amd64 3.5.0-2 [2950 kB] Get:113 http://deb.debian.org/debian unstable/main amd64 libssh2-1-dev amd64 1.11.1-1 [393 kB] Get:114 http://deb.debian.org/debian unstable/main amd64 libzstd-dev amd64 1.5.7+dfsg-1 [371 kB] Get:115 http://deb.debian.org/debian unstable/main amd64 libcurl4-gnutls-dev amd64 8.14.1-2 [503 kB] Get:116 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-19 [836 kB] Get:117 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.84.3-1 [1515 kB] Get:118 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB] Get:119 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 10.2.0-1+b1 [479 kB] Get:120 http://deb.debian.org/debian unstable/main amd64 libhdf5-310 amd64 1.14.5+repack-3 [1344 kB] Get:121 http://deb.debian.org/debian unstable/main amd64 libhdf5-cpp-310 amd64 1.14.5+repack-3 [133 kB] Get:122 http://deb.debian.org/debian unstable/main amd64 libhdf5-fortran-310 amd64 1.14.5+repack-3 [111 kB] Get:123 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-310 amd64 1.14.5+repack-3 [69.3 kB] Get:124 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-fortran-310 amd64 1.14.5+repack-3 [43.9 kB] Get:125 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-cpp-310 amd64 1.14.5+repack-3 [24.4 kB] Get:126 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-4 [168 kB] Get:127 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-4 [292 kB] Get:128 http://deb.debian.org/debian unstable/main amd64 libjpeg-dev amd64 1:2.1.5-4 [72.2 kB] Get:129 http://deb.debian.org/debian unstable/main amd64 libhdf5-dev amd64 1.14.5+repack-3 [3165 kB] Get:130 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+24 [217 kB] Get:131 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB] Get:132 http://deb.debian.org/debian unstable/main amd64 libicu76 amd64 76.1-4 [9722 kB] Get:133 http://deb.debian.org/debian unstable/main amd64 libkpathsea6 amd64 2024.20240313.70630+ds-6 [157 kB] Get:134 http://deb.debian.org/debian unstable/main amd64 libnetcdf22 amd64 1:4.9.3-1 [517 kB] Get:135 http://deb.debian.org/debian unstable/main amd64 libminc2-5.3.0t64 amd64 2.4.06-2.1+b4 [236 kB] Get:136 http://deb.debian.org/debian unstable/main amd64 libxml2-dev amd64 2.12.7+dfsg+really2.9.14-1 [792 kB] Get:137 http://deb.debian.org/debian unstable/main amd64 libnetcdf-dev amd64 1:4.9.3-1 [116 kB] Get:138 http://deb.debian.org/debian unstable/main amd64 libminc-dev amd64 2.4.06-2.1+b4 [70.0 kB] Get:139 http://deb.debian.org/debian unstable/main amd64 libmpfi0 amd64 1.5.4+ds-4 [35.5 kB] Get:140 http://deb.debian.org/debian unstable/main amd64 libznz3 amd64 3.0.1-9.1+b1 [10.4 kB] Get:141 http://deb.debian.org/debian unstable/main amd64 libnifti2-2 amd64 3.0.1-9.1+b1 [75.9 kB] Get:142 http://deb.debian.org/debian unstable/main amd64 libnifticdf2 amd64 3.0.1-9.1+b1 [52.6 kB] Get:143 http://deb.debian.org/debian unstable/main amd64 libnifticdf-dev amd64 3.0.1-9.1+b1 [58.6 kB] Get:144 http://deb.debian.org/debian unstable/main amd64 libniftiio2t64 amd64 3.0.1-9.1+b1 [58.8 kB] Get:145 http://deb.debian.org/debian unstable/main amd64 libniftiio-dev amd64 3.0.1-9.1+b1 [67.9 kB] Get:146 http://deb.debian.org/debian unstable/main amd64 libznz-dev amd64 3.0.1-9.1+b1 [10.8 kB] Get:147 http://deb.debian.org/debian unstable/main amd64 libnifti2-dev amd64 3.0.1-9.1+b1 [95.2 kB] Get:148 http://deb.debian.org/debian unstable/main amd64 libpaper2 amd64 2.2.5-0.3+b2 [16.7 kB] Get:149 http://deb.debian.org/debian unstable/main amd64 libpaper-utils amd64 2.2.5-0.3+b2 [16.5 kB] Get:150 http://deb.debian.org/debian unstable/main amd64 libpotrace0 amd64 1.16-2+b2 [25.6 kB] Get:151 http://deb.debian.org/debian unstable/main amd64 libptexenc1 amd64 2024.20240313.70630+ds-6 [49.3 kB] Get:152 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.6-1 [37.3 kB] Get:153 http://deb.debian.org/debian unstable/main amd64 libsynctex2 amd64 2024.20240313.70630+ds-6 [62.9 kB] Get:154 http://deb.debian.org/debian unstable/main amd64 libteckit0 amd64 2.5.12+ds1-1+b1 [341 kB] Get:155 http://deb.debian.org/debian unstable/main amd64 libtexlua53-5 amd64 2024.20240313.70630+ds-6 [114 kB] Get:156 http://deb.debian.org/debian unstable/main amd64 libxt6t64 amd64 1:1.2.1-1.2+b2 [188 kB] Get:157 http://deb.debian.org/debian unstable/main amd64 libxmu6 amd64 2:1.1.3-3+b4 [59.0 kB] Get:158 http://deb.debian.org/debian unstable/main amd64 libxpm4 amd64 1:3.5.17-1+b3 [56.2 kB] Get:159 http://deb.debian.org/debian unstable/main amd64 libxaw7 amd64 2:1.0.16-1 [212 kB] Get:160 http://deb.debian.org/debian unstable/main amd64 libxi6 amd64 2:1.8.2-1 [78.9 kB] Get:161 http://deb.debian.org/debian unstable/main amd64 libzzip-0-13t64 amd64 0.13.78+dfsg.1-0.1 [59.0 kB] Get:162 http://deb.debian.org/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:163 http://deb.debian.org/debian unstable/main amd64 tex-common all 6.19 [29.4 kB] Get:164 http://deb.debian.org/debian unstable/main amd64 texlive-binaries amd64 2024.20240313.70630+ds-6 [8446 kB] Get:165 http://deb.debian.org/debian unstable/main amd64 xdg-utils all 1.2.1-2 [75.8 kB] Get:166 http://deb.debian.org/debian unstable/main amd64 texlive-base all 2024.20250309-1 [23.1 MB] Get:167 http://deb.debian.org/debian unstable/main amd64 texlive-latex-base all 2024.20250309-1 [1294 kB] Preconfiguring packages ... Fetched 108 MB in 1s (111 MB/s) Selecting previously unselected package m4. (Reading database ... 23091 files and directories currently installed.) Preparing to unpack .../000-m4_1.4.19-8_amd64.deb ... Unpacking m4 (1.4.19-8) ... Selecting previously unselected package flex. Preparing to unpack .../001-flex_2.6.4-8.2+b4_amd64.deb ... Unpacking flex (2.6.4-8.2+b4) ... Selecting previously unselected package libtext-charwidth-perl:amd64. Preparing to unpack .../002-libtext-charwidth-perl_0.04-11+b5_amd64.deb ... Unpacking libtext-charwidth-perl:amd64 (0.04-11+b5) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../003-libproc2-0_2%3a4.0.4-8_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-8) ... Selecting previously unselected package procps. Preparing to unpack .../004-procps_2%3a4.0.4-8_amd64.deb ... Unpacking procps (2:4.0.4-8) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../005-sensible-utils_0.0.25_all.deb ... Unpacking sensible-utils (0.0.25) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../006-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../007-libmagic1t64_1%3a5.46-5_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../008-file_1%3a5.46-5_amd64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../009-gettext-base_0.23.1-2_amd64.deb ... Unpacking gettext-base (0.23.1-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../010-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../011-groff-base_1.23.0-9_amd64.deb ... Unpacking groff-base (1.23.0-9) ... 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Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Selecting previously unselected package libssh2-1t64:amd64. Preparing to unpack .../036-libssh2-1t64_1.11.1-1_amd64.deb ... Unpacking libssh2-1t64:amd64 (1.11.1-1) ... Selecting previously unselected package libcurl4t64:amd64. Preparing to unpack .../037-libcurl4t64_8.14.1-2_amd64.deb ... Unpacking libcurl4t64:amd64 (8.14.1-2) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../038-libexpat1_2.7.1-1_amd64.deb ... Unpacking libexpat1:amd64 (2.7.1-1) ... Selecting previously unselected package libjsoncpp26:amd64. Preparing to unpack .../039-libjsoncpp26_1.9.6-3_amd64.deb ... Unpacking libjsoncpp26:amd64 (1.9.6-3) ... Selecting previously unselected package librhash1:amd64. Preparing to unpack .../040-librhash1_1.4.6-1_amd64.deb ... Unpacking librhash1:amd64 (1.4.6-1) ... Selecting previously unselected package libuv1t64:amd64. Preparing to unpack .../041-libuv1t64_1.50.0-2_amd64.deb ... 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Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../048-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../049-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../050-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../051-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../052-gettext_0.23.1-2_amd64.deb ... Unpacking gettext (0.23.1-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../053-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../054-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../055-debhelper_13.24.2_all.deb ... Unpacking debhelper (13.24.2) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../056-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../057-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../058-fontconfig-config_2.15.0-2.3_amd64.deb ... Unpacking fontconfig-config (2.15.0-2.3) ... Selecting previously unselected package fonts-lmodern. Preparing to unpack .../059-fonts-lmodern_2.005-1_all.deb ... 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Setting up libxcb-render0:amd64 (1.17.0-2+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libbrotli1:amd64 (1.1.0-2+b7) ... Setting up libuv1t64:amd64 (1.50.0-2) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up x11-common (1:7.7+24) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: WARNING: No init system and policy-rc.d missing! Defaulting to block. Setting up libpsl5t64:amd64 (0.21.2-1.1+b1) ... Setting up libnghttp2-14:amd64 (1.64.0-1.1) ... Setting up gettext-base (0.23.1-2) ... Setting up m4 (1.4.19-8) ... Setting up libevent-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up libxcb-shm0:amd64 (1.17.0-2+b1) ... Setting up libcom-err2:amd64 (1.47.2-3+b1) ... Setting up file (1:5.46-5) ... Setting up libtext-wrapi18n-perl (0.06-10) ... Setting up libaec0:amd64 (1.1.3-1+b1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up libpsl-dev:amd64 (0.21.2-1.1+b1) ... Setting up libkrb5support0:amd64 (1.21.3-5) ... Setting up autotools-dev (20240727.1) ... Setting up libglib2.0-0t64:amd64 (2.84.3-1) ... No schema files found: doing nothing. Setting up libunbound8:amd64 (1.22.0-1+b1) ... Setting up libpkgconf3:amd64 (1.8.1-4) ... Setting up libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-3) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-4) ... Setting up libzzip-0-13t64:amd64 (0.13.78+dfsg.1-0.1) ... Setting up libgnutls-dane0t64:amd64 (3.8.9-2) ... Setting up libx11-data (2:1.8.12-1) ... Setting up libjpeg62-turbo-dev:amd64 (1:2.1.5-4) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libteckit0:amd64 (2.5.12+ds1-1+b1) ... Setting up libjsoncpp26:amd64 (1.9.6-3) ... Setting up libldap-dev:amd64 (2.6.10+dfsg-1+b1) ... Setting up t1utils (1.41-4) ... Setting up libtexlua53-5:amd64 (2024.20240313.70630+ds-6) ... Setting up libproc2-0:amd64 (2:4.0.4-8) ... Setting up comerr-dev:amd64 (2.1-1.47.2-3+b1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libssl-dev:amd64 (3.5.0-2) ... Setting up libpng16-16t64:amd64 (1.6.48-1) ... Setting up autopoint (0.23.1-2) ... Setting up libmpfi0:amd64 (1.5.4+ds-4) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libnifticdf-dev:amd64 (3.0.1-9.1+b1) ... Setting up pkgconf-bin (1.8.1-4) ... Setting up libk5crypto3:amd64 (1.21.3-5) ... Setting up libidn2-dev:amd64 (2.3.8-2) ... Setting up libkpathsea6:amd64 (2024.20240313.70630+ds-6) ... Setting up libgfortran5:amd64 (14.2.0-19) ... Setting up autoconf (2.72-3.1) ... Setting up libnghttp3-9:amd64 (1.8.0-1) ... Setting up libnghttp3-dev:amd64 (1.8.0-1) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.25) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libznz3:amd64 (3.0.1-9.1+b1) ... Setting up procps (2:4.0.4-8) ... Setting up libniftiio2t64:amd64 (3.0.1-9.1+b1) ... Setting up bison (2:3.8.2+dfsg-1+b2) ... update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode Setting up fonts-lmodern (2.005-1) ... Setting up libx11-6:amd64 (2:1.8.12-1) ... Setting up libngtcp2-16:amd64 (1.11.0-1) ... Setting up cmake-data (3.31.6-2) ... Setting up librhash1:amd64 (1.4.6-1) ... Setting up libkrb5-3:amd64 (1.21.3-5) ... Setting up libicu76:amd64 (76.1-4) ... Setting up libpaper2:amd64 (2.2.5-0.3+b2) ... Setting up libssh2-1t64:amd64 (1.11.1-1) ... Setting up libtasn1-6-dev:amd64 (4.20.0-2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-1) ... Setting up xdg-utils (1.2.1-2) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up libbrotli-dev:amd64 (1.1.0-2+b7) ... Setting up libngtcp2-crypto-gnutls8:amd64 (1.11.0-1) ... Setting up libp11-kit-dev:amd64 (0.25.5-3) ... Setting up libsz2:amd64 (1.1.3-1+b1) ... Setting up libsynctex2:amd64 (2024.20240313.70630+ds-6) ... Setting up libpotrace0:amd64 (1.16-2+b2) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up libice6:amd64 (2:1.1.1-1) ... Setting up flex (2.6.4-8.2+b4) ... Setting up gettext (0.23.1-2) ... Setting up libgmp-dev:amd64 (2:6.3.0+dfsg-3) ... Setting up libxpm4:amd64 (1:3.5.17-1+b3) ... Setting up nettle-dev:amd64 (3.10.1-1) ... Setting up libxrender1:amd64 (1:0.9.12-1) ... Setting up libtool (2.5.4-4) ... Setting up fontconfig-config (2.15.0-2.3) ... Setting up libniftiio-dev:amd64 (3.0.1-9.1+b1) ... Setting up libaec-dev:amd64 (1.1.3-1+b1) ... Setting up libjpeg-dev:amd64 (1:2.1.5-4) ... Setting up libxext6:amd64 (2:1.3.4-1+b3) ... Setting up libngtcp2-crypto-gnutls-dev:amd64 (1.11.0-1) ... Setting up libpaper-utils (2.2.5-0.3+b2) ... Setting up libngtcp2-dev:amd64 (1.11.0-1) ... Setting up pkgconf:amd64 (1.8.1-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libxml2-dev:amd64 (2.12.7+dfsg+really2.9.14-1) ... Setting up libptexenc1:amd64 (2024.20240313.70630+ds-6) ... Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up libznz-dev:amd64 (3.0.1-9.1+b1) ... Setting up libnifti2-2:amd64 (3.0.1-9.1+b1) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-5) ... Setting up ucf (3.0052) ... Setting up libssh2-1-dev:amd64 (1.11.1-1) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-9) ... Setting up libharfbuzz0b:amd64 (10.2.0-1+b1) ... Setting up libnifti2-dev (3.0.1-9.1+b1) ... Setting up libfontconfig1:amd64 (2.15.0-2.3) ... Setting up libsm6:amd64 (2:1.2.6-1) ... Setting up libarchive13t64:amd64 (3.7.4-3) ... Setting up libgnutls28-dev:amd64 (3.8.9-2) ... Setting up libnghttp2-dev:amd64 (1.64.0-1.1) ... Setting up libxi6:amd64 (2:1.8.2-1) ... Setting up libcurl4t64:amd64 (8.14.1-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libcurl3t64-gnutls:amd64 (8.14.1-2) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:amd64 (1.18.4-1+b1) ... Setting up tex-common (6.19) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libgssrpc4t64:amd64 (1.21.3-5) ... Setting up libxt6t64:amd64 (1:1.2.1-1.2+b2) ... Setting up librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libhdf5-310:amd64 (1.14.5+repack-3) ... Setting up cmake (3.31.6-2) ... Setting up libhdf5-fortran-310:amd64 (1.14.5+repack-3) ... Setting up libkadm5clnt-mit12:amd64 (1.21.3-5) ... Setting up libhdf5-cpp-310:amd64 (1.14.5+repack-3) ... Setting up libhdf5-hl-310:amd64 (1.14.5+repack-3) ... Setting up libxmu6:amd64 (2:1.1.3-3+b4) ... Setting up libkdb5-10t64:amd64 (1.21.3-5) ... Setting up libnetcdf22:amd64 (1:4.9.3-1) ... Setting up debhelper (13.24.2) ... Setting up libxaw7:amd64 (2:1.0.16-1) ... Setting up texlive-binaries (2024.20240313.70630+ds-6) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up libkadm5srv-mit12:amd64 (1.21.3-5) ... Setting up texlive-base (2024.20250309-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex Setting up libminc2-5.3.0t64:amd64 (2.4.06-2.1+b4) ... Setting up krb5-multidev:amd64 (1.21.3-5) ... Setting up libhdf5-hl-cpp-310:amd64 (1.14.5+repack-3) ... Setting up libhdf5-hl-fortran-310:amd64 (1.14.5+repack-3) ... Setting up libkrb5-dev:amd64 (1.21.3-5) ... Setting up texlive-latex-base (2024.20250309-1) ... Setting up libcurl4-gnutls-dev:amd64 (8.14.1-2) ... Setting up libhdf5-dev (1.14.5+repack-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libnetcdf-dev (1:4.9.3-1) ... Setting up libminc-dev:amd64 (2.4.06-2.1+b4) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.41-9) ... Processing triggers for tex-common (6.19) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. +------------------------------------------------------------------------------+ | Check architectures Tue, 01 Jul 2025 08:45:42 +0000 | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any) +------------------------------------------------------------------------------+ | Build environment Tue, 01 Jul 2025 08:45:42 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.25-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.25-1 (2025-04-25) amd64 (x86_64) Toolchain package versions: binutils_2.44-3 dpkg-dev_1.22.20 g++-13_13.4.0-1 g++-14_14.2.0-19 gcc-13_13.4.0-1 gcc-14_14.2.0-19 libc6-dev_2.41-9 libstdc++-13-dev_13.4.0-1 libstdc++-14-dev_14.2.0-19 libstdc++6_14.2.0-19 linux-libc-dev_6.12.33-1 Package versions: adduser_3.152 apt_3.0.3 autoconf_2.72-3.1 automake_1:1.17-4 autopoint_0.23.1-2 autotools-dev_20240727.1 base-files_13.8 base-passwd_3.6.7 bash_5.2.37-2+b3 binutils_2.44-3 binutils-common_2.44-3 binutils-x86-64-linux-gnu_2.44-3 bison_2:3.8.2+dfsg-1+b2 bsdextrautils_2.41-5 bsdutils_1:2.41-5 build-essential_12.12 bzip2_1.0.8-6 cmake_3.31.6-2 cmake-data_3.31.6-2 comerr-dev_2.1-1.47.2-3+b1 coreutils_9.7-3 cpp_4:14.2.0-1 cpp-13_13.4.0-1 cpp-13-x86-64-linux-gnu_13.4.0-1 cpp-14_14.2.0-19 cpp-14-x86-64-linux-gnu_14.2.0-19 cpp-x86-64-linux-gnu_4:14.2.0-1 dash_0.5.12-12 debconf_1.5.91 debhelper_13.24.2 debian-archive-keyring_2025.1 debianutils_5.23.1 dh-autoreconf_20 dh-strip-nondeterminism_1.14.1-2 diffutils_1:3.10-4 dirmngr_2.4.7-21+b1 dpkg_1.22.20 dpkg-dev_1.22.20 dwz_0.15-1+b1 eatmydata_131-2 file_1:5.46-5 findutils_4.10.0-3 flex_2.6.4-8.2+b4 fontconfig-config_2.15.0-2.3 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 fonts-lmodern_2.005-1 g++_4:14.2.0-1 g++-13_13.4.0-1 g++-13-x86-64-linux-gnu_13.4.0-1 g++-14_14.2.0-19 g++-14-x86-64-linux-gnu_14.2.0-19 g++-x86-64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-13_13.4.0-1 gcc-13-base_13.4.0-1 gcc-13-x86-64-linux-gnu_13.4.0-1 gcc-14_14.2.0-19 gcc-14-base_14.2.0-19 gcc-14-x86-64-linux-gnu_14.2.0-19 gcc-x86-64-linux-gnu_4:14.2.0-1 gettext_0.23.1-2 gettext-base_0.23.1-2 gnupg_2.4.7-21 gnupg-l10n_2.4.7-21 gnupg-utils_2.4.7-21+b1 gpg_2.4.7-21+b1 gpg-agent_2.4.7-21+b1 gpg-wks-client_2.4.7-21+b1 gpgconf_2.4.7-21+b1 gpgsm_2.4.7-21+b1 gpgv_2.4.7-21+b1 grep_3.11-4 groff-base_1.23.0-9 gzip_1.13-1 hdf5-helpers_1.14.5+repack-3 hostname_3.25 init-system-helpers_1.68 intltool-debian_0.35.0+20060710.6 krb5-multidev_1.21.3-5 libacl1_2.3.2-2+b1 libaec-dev_1.1.3-1+b1 libaec0_1.1.3-1+b1 libapt-pkg6.0t64_2.9.25 libapt-pkg7.0_3.0.3 libarchive-zip-perl_1.68-1 libarchive13t64_3.7.4-3 libasan8_14.2.0-19 libassuan0_2.5.6-1+b1 libassuan9_3.0.2-2 libatomic1_14.2.0-19 libattr1_1:2.5.2-3 libaudit-common_1:4.0.5-1 libaudit1_1:4.0.5-1 libbinutils_2.44-3 libblkid1_2.41-5 libbrotli-dev_1.1.0-2+b7 libbrotli1_1.1.0-2+b7 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libc-bin_2.41-9 libc-dev-bin_2.41-9 libc-l10n_2.41-9 libc6_2.41-9 libc6-dev_2.41-9 libcairo2_1.18.4-1+b1 libcap-ng0_0.8.5-4+b1 libcap2_1:2.75-9 libcc1-0_14.2.0-19 libcom-err2_1.47.2-3+b1 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.44-3 libctf0_2.44-3 libcurl3t64-gnutls_8.14.1-2 libcurl4-gnutls-dev_8.14.1-2 libcurl4t64_8.14.1-2 libdb5.3t64_5.3.28+dfsg2-9 libdebconfclient0_0.279 libdebhelper-perl_13.24.2 libdpkg-perl_1.22.20 libeatmydata1_131-2+b1 libelf1t64_0.192-4 libevent-2.1-7t64_2.1.12-stable-10+b1 libexpat1_2.7.1-1 libffi8_3.4.8-2 libfile-stripnondeterminism-perl_1.14.1-2 libfontconfig1_2.15.0-2.3 libfreetype6_2.13.3+dfsg-1 libgcc-13-dev_13.4.0-1 libgcc-14-dev_14.2.0-19 libgcc-s1_14.2.0-19 libgcrypt20_1.11.0-7 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgfortran5_14.2.0-19 libglib2.0-0t64_2.84.3-1 libgmp-dev_2:6.3.0+dfsg-3 libgmp10_2:6.3.0+dfsg-3 libgmpxx4ldbl_2:6.3.0+dfsg-3 libgnutls-dane0t64_3.8.9-2 libgnutls-openssl27t64_3.8.9-2 libgnutls28-dev_3.8.9-2 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PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: minc-tools Binary: minc-tools Architecture: any Version: 2.3.00+dfsg-12 Maintainer: Debian Med Packaging Team Uploaders: Steve M. Robbins , Andreas Tille Homepage: https://www.bic.mni.mcgill.ca/ServicesSoftware/HomePage Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/minc-tools Vcs-Git: https://salsa.debian.org/med-team/minc-tools.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cmake, bison, flex, libminc-dev, libnifti2-dev, libnetcdf-dev, zlib1g-dev, texlive-latex-base, libhdf5-dev, debhelper Package-List: minc-tools deb science optional arch=any Checksums-Sha1: d5f2d7d633410b1a1f1d4026adcd2c125a16847f 2885395 minc-tools_2.3.00+dfsg.orig.tar.gz 4bc7cde9a3ed67eec06ffe3bfe47e3f7c2b47192 16576 minc-tools_2.3.00+dfsg-12.debian.tar.xz Checksums-Sha256: 002b01c54b11305dc7350cc7e553debc4d07d4896b2eee850233d07ecc9989b9 2885395 minc-tools_2.3.00+dfsg.orig.tar.gz a78bedbf0a01b9a9e4c56567d5973f936e923c494ff5b4c1c065ef1191f85110 16576 minc-tools_2.3.00+dfsg-12.debian.tar.xz Files: 629912702e72bce17b78361027105e2b 2885395 minc-tools_2.3.00+dfsg.orig.tar.gz b93f3030de1ca9901d4e2cec32f63ac1 16576 minc-tools_2.3.00+dfsg-12.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJDBAEBCgAtFiEEy89k8fa3rclNjyokyeVeL63I9LkFAmexYQ0PHHNtckBkZWJp YW4ub3JnAAoJEMnlXi+tyPS5xk0P+QHn+Y3FYc7q6QOXnWoq1I0pY22T5gdT0Ulk LEcIOppsODlQK3hV1VxcSKt9TzPHIoHYGAhh+D/9hMo0enSYyRGdUVN4ScygPP9m cw/UHsvbvLAyUHSN/laCKRZkdwP9bQHfqE4UU3BecKQI7vc9OgxIRQ7E+tMYZYPb Nzs9sRBLuEvtUsCrG+fDo2H9ro9LQO293wGkr1ucefMBErUs/AjWxdpU20Hcc/AM CixXOTQZmYi964Vz3H3eBe10t0qaoNJf+PoLvgjkL5yZz1YgKc6AiywcYO3A/eRN rLcRuxe6rAWPAUeVu+63231ct+YHaRSWHmh93hp3DiCINany3VT5uN1/6WdLrBq+ NYdAcid/mSfurWAFhfPYTOAlwz+jS3zDjsLX9p4IC7kb+e5IlhmOcwvhp72jKrrP izGoaVH6K1GFCIFhVWcp53OWWzCKV0/tWA0+OXtFkxE7FV2jR0/lC5qVC4grPb8r d9FmV4svbTDmWIsjaJWeGtkr21FXhXvXZSl7s6DX8O74zDdbuWwPii2wsVkNhIe8 AanomVj0K+OlXi2IzfCbY+tpcTBNPveogSus1Ca8T/6/6Oxk+cu6KG3xf/MMyiVf EndLDWhwjWXr1TstV+uTYDK0Ps5qNqbYFGJSrzavF9dNjxdzd+LR4GKLoZqfNorC AbhQm744 =KwtV -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./minc-tools_2.3.00+dfsg-12.dsc: no acceptable signature found dpkg-source: info: extracting minc-tools in /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg dpkg-source: info: unpacking minc-tools_2.3.00+dfsg.orig.tar.gz dpkg-source: info: unpacking minc-tools_2.3.00+dfsg-12.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 01_mincedit-sensible-viewer.diff dpkg-source: info: applying build-with-libnifti dpkg-source: info: applying hdf5-1.10-support.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying fix_manpages.patch dpkg-source: info: applying fix-gcc10-build.patch dpkg-source: info: applying mnc2nii-use-size-t.patch dpkg-source: info: applying netcdf-4.9.3.patch Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Timed Build Commands Tue, 01 Jul 2025 08:45:43 +0000 | +------------------------------------------------------------------------------+ /usr/share/debomatic/sbuildcommands/starting-build-commands/no-network minc-tools_2.3.00+dfsg-12 perl-5.40-throwaway amd64 -------------------------------------------------------------------------------------------------------------------------- I: Finished running '/usr/share/debomatic/sbuildcommands/starting-build-commands/no-network minc-tools_2.3.00+dfsg-12 perl-5.40-throwaway amd64'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_GB.UTF-8 LANGUAGE=en_GB:en LC_ALL=C.UTF-8 LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so LOGNAME=debomatic PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg SCHROOT_ALIAS_NAME=perl-5.40-throwaway-amd64-debomatic SCHROOT_CHROOT_NAME=perl-5.40-amd64-debomatic SCHROOT_COMMAND=env SCHROOT_GID=110 SCHROOT_GROUP=sbuild SCHROOT_SESSION_ID=perl-5.40-amd64-debomatic-5f400735-4ea5-4268-a6e8-a2716fc6773d SCHROOT_UID=1002 SCHROOT_USER=debomatic SHELL=/bin/sh USER=debomatic dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -Zxz dpkg-buildpackage: info: source package minc-tools dpkg-buildpackage: info: source version 2.3.00+dfsg-12 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Steve M. Robbins dpkg-source -Zxz --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean dpkg-source -Zxz -b . dpkg-source: info: using source format '3.0 (quilt)' dpkg-source: info: building minc-tools using existing ./minc-tools_2.3.00+dfsg.orig.tar.gz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: building minc-tools in minc-tools_2.3.00+dfsg-12.debian.tar.xz dpkg-source: info: building minc-tools in minc-tools_2.3.00+dfsg-12.dsc debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg' dh_auto_configure -- cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu .. CMake Warning (dev) at CMakeLists.txt:6 (PROJECT): cmake_minimum_required() should be called prior to this top-level project() call. Please see the cmake-commands(7) manual for usage documentation of both commands. This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Deprecation Warning at CMakeLists.txt:20 (CMAKE_MINIMUM_REQUIRED): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. CMake Deprecation Warning at CMakeLists.txt:24 (CMAKE_POLICY): The OLD behavior for policy CMP0026 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. -- Looking for mkstemp -- Looking for mkstemp - found -- Looking for tmpnam -- Looking for tmpnam - found -- Looking for tempnam -- Looking for tempnam - found -- Looking for strerror -- Looking for strerror - found -- Looking for popen -- Looking for popen - found -- Looking for fork -- Looking for fork - found -- Looking for vfork -- Looking for vfork - found -- Looking for fdopen -- Looking for fdopen - found -- Looking for strdup -- Looking for strdup - found -- Looking for getpwnam -- Looking for getpwnam - found -- Looking for select -- Looking for select - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for system -- Looking for system - found -- Looking for include file float.h -- Looking for include file float.h - found -- Looking for include file sys/dir.h -- Looking for include file sys/dir.h - found -- Looking for include file sys/ndir.h -- Looking for include file sys/ndir.h - not found -- Looking for include file sys/stat.h -- Looking for include file sys/stat.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file sys/wait.h -- Looking for include file sys/wait.h - found -- Looking for include file values.h -- Looking for include file values.h - found -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file memory.h -- Looking for include file memory.h - found -- Looking for include file stdlib.h -- Looking for include file stdlib.h - found -- Looking for include file fcntl.h -- Looking for include file fcntl.h - found -- Looking for include file dlfcn.h -- Looking for include file dlfcn.h - found -- Looking for include file vfork.h -- Looking for include file vfork.h - not found -- Looking for include file inttypes.h -- Looking for include file inttypes.h - found -- Looking for include file string.h -- Looking for include file string.h - found -- Looking for include file strings.h -- Looking for include file strings.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Found BISON: /usr/bin/bison (found version "3.8.2") -- Found FLEX: /usr/bin/flex (found version "2.6.4") -- Configuring done (7.3s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg' dh_auto_build cd obj-x86_64-linux-gnu && make -j2 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg -B/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/CMakeFiles /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/invert_raw_image.dir/build.make progs/CMakeFiles/invert_raw_image.dir/depend make -f progs/CMakeFiles/mincaverage.dir/build.make progs/CMakeFiles/mincaverage.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/invert_raw_image.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/mincaverage.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/invert_raw_image.dir/build.make progs/CMakeFiles/invert_raw_image.dir/build make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 1%] Building C object progs/CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o -MF CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o.d -o CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincview/invert_raw_image.c make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincaverage.dir/build.make progs/CMakeFiles/mincaverage.dir/build make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 2%] Building C object progs/CMakeFiles/mincaverage.dir/mincaverage/mincaverage.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincaverage.dir/mincaverage/mincaverage.c.o -MF CMakeFiles/mincaverage.dir/mincaverage/mincaverage.c.o.d -o CMakeFiles/mincaverage.dir/mincaverage/mincaverage.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincaverage/mincaverage.c [ 3%] Linking C executable invert_raw_image cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/invert_raw_image.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/invert_raw_image.dir/link.d CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o -o invert_raw_image -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 4%] Linking C executable mincaverage cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincaverage.dir/link.txt --verbose=1 [ 4%] Built target invert_raw_image make -f progs/CMakeFiles/minccalc.dir/build.make progs/CMakeFiles/minccalc.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 5%] [FLEX][lex] Building scanner with flex 2.6.4 cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs && /usr/bin/flex -o/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/lex.c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc/lex.l [ 6%] [BISON][gram] Building parser with bison 3.8.2 cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs && /usr/bin/bison --debug -d -o /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/gram.c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc/gram.y /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc/gram.y: warning: 111 shift/reduce conflicts [-Wconflicts-sr] /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc/gram.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincaverage.dir/link.d CMakeFiles/mincaverage.dir/mincaverage/mincaverage.c.o -o mincaverage -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 6%] Built target mincaverage make -f progs/CMakeFiles/mincgen.dir/build.make progs/CMakeFiles/mincgen.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 7%] [FLEX][ncgenyy] Building scanner with flex 2.6.4 cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs && /usr/bin/flex -o/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/ncgenyy.c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen/ncgenyy.l cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/minccalc.dir/DependInfo.cmake "--color=" [ 7%] [BISON][ncgentab] Building parser with bison 3.8.2 cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs && /usr/bin/bison -d -o /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/ncgentab.c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen/ncgentab.y /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen/ncgentab.y: warning: 1 shift/reduce conflict [-Wconflicts-sr] /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen/ncgentab.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/minccalc.dir/build.make progs/CMakeFiles/minccalc.dir/build make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 8%] Building C object progs/CMakeFiles/minccalc.dir/minccalc/minccalc.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccalc.dir/minccalc/minccalc.c.o -MF CMakeFiles/minccalc.dir/minccalc/minccalc.c.o.d -o CMakeFiles/minccalc.dir/minccalc/minccalc.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc/minccalc.c cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/mincgen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincgen.dir/build.make progs/CMakeFiles/mincgen.dir/build make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 9%] Building C object progs/CMakeFiles/mincgen.dir/mincgen/main.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincgen.dir/mincgen/main.c.o -MF CMakeFiles/mincgen.dir/mincgen/main.c.o.d -o CMakeFiles/mincgen.dir/mincgen/main.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen/main.c [ 10%] Building C object progs/CMakeFiles/mincgen.dir/ncgentab.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincgen.dir/ncgentab.c.o -MF CMakeFiles/mincgen.dir/ncgentab.c.o.d -o CMakeFiles/mincgen.dir/ncgentab.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/ncgentab.c [ 10%] Building C object progs/CMakeFiles/minccalc.dir/minccalc/eval.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccalc.dir/minccalc/eval.c.o -MF CMakeFiles/minccalc.dir/minccalc/eval.c.o.d -o CMakeFiles/minccalc.dir/minccalc/eval.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc/eval.c [ 10%] Building C object progs/CMakeFiles/mincgen.dir/ncgenyy.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincgen.dir/ncgenyy.c.o -MF CMakeFiles/mincgen.dir/ncgenyy.c.o.d -o CMakeFiles/mincgen.dir/ncgenyy.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/ncgenyy.c [ 11%] Building C object progs/CMakeFiles/minccalc.dir/minccalc/ident.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccalc.dir/minccalc/ident.c.o -MF CMakeFiles/minccalc.dir/minccalc/ident.c.o.d -o CMakeFiles/minccalc.dir/minccalc/ident.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc/ident.c [ 12%] Building C object progs/CMakeFiles/minccalc.dir/minccalc/node.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc 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progs/CMakeFiles/minccalc.dir/minccalc/sym.c.o -MF CMakeFiles/minccalc.dir/minccalc/sym.c.o.d -o CMakeFiles/minccalc.dir/minccalc/sym.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc/sym.c [ 17%] Building C object progs/CMakeFiles/minccalc.dir/minccalc/vector.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccalc.dir/minccalc/vector.c.o -MF CMakeFiles/minccalc.dir/minccalc/vector.c.o.d -o CMakeFiles/minccalc.dir/minccalc/vector.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc/vector.c [ 18%] Building C object progs/CMakeFiles/minccalc.dir/lex.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccalc.dir/lex.c.o -MF CMakeFiles/minccalc.dir/lex.c.o.d -o CMakeFiles/minccalc.dir/lex.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/lex.c [ 19%] Building C object progs/CMakeFiles/minccalc.dir/gram.c.o /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen/genlib.c: In function ‘gen_c’: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen/genlib.c:161:28: warning: ‘%.16g’ directive writing between 1 and 23 bytes into a region of size 20 [-Wformat-overflow=] 161 | (void) sprintf(cp,"%.16g",* (doublep + num)); | ^~~~~ In function ‘cstring’, inlined from ‘gen_c’ at /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen/genlib.c:361:20: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen/genlib.c:161:27: note: assuming directive output of 22 bytes 161 | (void) sprintf(cp,"%.16g",* (doublep + num)); | ^~~~~~~ In file included from /usr/include/stdio.h:970, from /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen/genlib.c:11: In function ‘sprintf’, inlined from ‘cstring’ at /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen/genlib.c:161:9, inlined from ‘gen_c’ at /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen/genlib.c:361:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 24 bytes into a destination of size 20 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccalc.dir/gram.c.o -MF CMakeFiles/minccalc.dir/gram.c.o.d -o CMakeFiles/minccalc.dir/gram.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/gram.c [ 20%] Building C object progs/CMakeFiles/mincgen.dir/mincgen/getfill.c.o 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CMakeFiles/mincgen.dir/mincgen/init.c.o.d -o CMakeFiles/mincgen.dir/mincgen/init.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen/init.c [ 20%] Linking C executable minccalc cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/minccalc.dir/link.txt --verbose=1 [ 21%] Building C object progs/CMakeFiles/mincgen.dir/mincgen/load.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration 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progs/CMakeFiles/mincexample1.dir/mincexample/mincexample1.c.o -MF CMakeFiles/mincexample1.dir/mincexample/mincexample1.c.o.d -o CMakeFiles/mincexample1.dir/mincexample/mincexample1.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincexample/mincexample1.c [ 28%] Building C object progs/CMakeFiles/mincdump.dir/mincdump/vardata.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincdump.dir/mincdump/vardata.c.o -MF CMakeFiles/mincdump.dir/mincdump/vardata.c.o.d -o CMakeFiles/mincdump.dir/mincdump/vardata.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincdump/vardata.c [ 29%] Linking C executable mincexample1 cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincexample1.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincexample1.dir/link.d CMakeFiles/mincexample1.dir/mincexample/mincexample1.c.o -o mincexample1 -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 29%] Built target mincexample1 make -f progs/CMakeFiles/mincexample2.dir/build.make progs/CMakeFiles/mincexample2.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/mincexample2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincexample2.dir/build.make progs/CMakeFiles/mincexample2.dir/build make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 30%] Building C object progs/CMakeFiles/mincexample2.dir/mincexample/mincexample2.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincexample2.dir/mincexample/mincexample2.c.o -MF CMakeFiles/mincexample2.dir/mincexample/mincexample2.c.o.d -o CMakeFiles/mincexample2.dir/mincexample/mincexample2.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincexample/mincexample2.c [ 31%] Building C object progs/CMakeFiles/mincdump.dir/mincdump/dumplib.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincdump.dir/mincdump/dumplib.c.o -MF CMakeFiles/mincdump.dir/mincdump/dumplib.c.o.d -o CMakeFiles/mincdump.dir/mincdump/dumplib.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincdump/dumplib.c [ 32%] Linking C executable mincdump cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincdump.dir/link.txt --verbose=1 [ 33%] Linking C executable mincexample2 cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincexample2.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincdump.dir/link.d CMakeFiles/mincdump.dir/mincdump/mincdump.c.o CMakeFiles/mincdump.dir/mincdump/vardata.c.o CMakeFiles/mincdump.dir/mincdump/dumplib.c.o -o mincdump -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 33%] Built target mincdump make -f progs/CMakeFiles/mincexpand.dir/build.make progs/CMakeFiles/mincexpand.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/mincexpand.dir/DependInfo.cmake "--color=" /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincexample2.dir/link.d CMakeFiles/mincexample2.dir/mincexample/mincexample2.c.o -o mincexample2 -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincexpand.dir/build.make progs/CMakeFiles/mincexpand.dir/build make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 33%] Built target mincexample2 make -f progs/CMakeFiles/mincextract.dir/build.make progs/CMakeFiles/mincextract.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/mincextract.dir/DependInfo.cmake "--color=" [ 33%] Building C object progs/CMakeFiles/mincexpand.dir/mincexpand/mincexpand.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincexpand.dir/mincexpand/mincexpand.c.o -MF CMakeFiles/mincexpand.dir/mincexpand/mincexpand.c.o.d -o CMakeFiles/mincexpand.dir/mincexpand/mincexpand.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincexpand/mincexpand.c make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincextract.dir/build.make progs/CMakeFiles/mincextract.dir/build make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 34%] Building C object progs/CMakeFiles/mincextract.dir/mincextract/mincextract.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincextract.dir/mincextract/mincextract.c.o -MF CMakeFiles/mincextract.dir/mincextract/mincextract.c.o.d -o CMakeFiles/mincextract.dir/mincextract/mincextract.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincextract/mincextract.c [ 35%] Linking C executable mincexpand cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincexpand.dir/link.txt --verbose=1 [ 36%] Building C object progs/CMakeFiles/mincextract.dir/Proglib/minc_endian.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincextract.dir/Proglib/minc_endian.c.o -MF CMakeFiles/mincextract.dir/Proglib/minc_endian.c.o.d -o CMakeFiles/mincextract.dir/Proglib/minc_endian.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib/minc_endian.c [ 37%] Linking C executable mincextract cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincextract.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincexpand.dir/link.d CMakeFiles/mincexpand.dir/mincexpand/mincexpand.c.o -o mincexpand -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 37%] Built target mincexpand make -f progs/CMakeFiles/mincinfo.dir/build.make progs/CMakeFiles/mincinfo.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs 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CMakeFiles/mincextract.dir/mincextract/mincextract.c.o CMakeFiles/mincextract.dir/Proglib/minc_endian.c.o -o mincextract -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 38%] Built target mincextract make -f progs/CMakeFiles/minclookup.dir/build.make progs/CMakeFiles/minclookup.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs 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-I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minclookup.dir/minclookup/minclookup.c.o -MF CMakeFiles/minclookup.dir/minclookup/minclookup.c.o.d -o CMakeFiles/minclookup.dir/minclookup/minclookup.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minclookup/minclookup.c [ 39%] Linking C executable mincinfo cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincinfo.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincinfo.dir/link.d CMakeFiles/mincinfo.dir/mincinfo/mincinfo.c.o -o mincinfo -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 40%] Linking C executable minclookup cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/minclookup.dir/link.txt --verbose=1 [ 40%] Built target mincinfo make -f progs/CMakeFiles/mincmakescalar.dir/build.make progs/CMakeFiles/mincmakescalar.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && 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-I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincmakescalar.dir/mincmakescalar/mincmakescalar.c.o -MF CMakeFiles/mincmakescalar.dir/mincmakescalar/mincmakescalar.c.o.d -o CMakeFiles/mincmakescalar.dir/mincmakescalar/mincmakescalar.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincmakescalar/mincmakescalar.c /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/minclookup.dir/link.d CMakeFiles/minclookup.dir/minclookup/minclookup.c.o -o minclookup -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 41%] Built target minclookup make -f progs/CMakeFiles/mincmakevector.dir/build.make progs/CMakeFiles/mincmakevector.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && 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Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 44%] Building C object progs/CMakeFiles/mincmath.dir/mincmath/mincmath.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT 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progs/CMakeFiles/minc_modify_header.dir/build.make progs/CMakeFiles/minc_modify_header.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/minc_modify_header.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/minc_modify_header.dir/build.make progs/CMakeFiles/minc_modify_header.dir/build make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 45%] Building C object progs/CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o -MF CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o.d -o CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minc_modify_header/minc_modify_header.c [ 46%] Linking C executable mincmath cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincmath.dir/link.txt --verbose=1 [ 46%] Linking C executable minc_modify_header cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_modify_header.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincmath.dir/link.d CMakeFiles/mincmath.dir/mincmath/mincmath.c.o -o mincmath -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 46%] Built target mincmath make -f progs/CMakeFiles/mincresample.dir/build.make progs/CMakeFiles/mincresample.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/mincresample.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincresample.dir/build.make progs/CMakeFiles/mincresample.dir/build make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/minc_modify_header.dir/link.d CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o -o minc_modify_header -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 47%] Building C object progs/CMakeFiles/mincresample.dir/mincresample/mincresample.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincresample.dir/mincresample/mincresample.c.o -MF CMakeFiles/mincresample.dir/mincresample/mincresample.c.o.d -o CMakeFiles/mincresample.dir/mincresample/mincresample.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c [ 47%] Built target minc_modify_header make -f progs/CMakeFiles/mincreshape.dir/build.make progs/CMakeFiles/mincreshape.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/mincreshape.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincreshape.dir/build.make progs/CMakeFiles/mincreshape.dir/build make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 48%] Building C object progs/CMakeFiles/mincreshape.dir/mincreshape/mincreshape.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincreshape.dir/mincreshape/mincreshape.c.o -MF CMakeFiles/mincreshape.dir/mincreshape/mincreshape.c.o.d -o CMakeFiles/mincreshape.dir/mincreshape/mincreshape.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincreshape/mincreshape.c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c: In function ‘create_output_file.constprop’: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:1454:39: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 1454 | (void) sprintf(string, "%s%d", dimname, idim); | ^~ /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:1454:36: note: directive argument in the range [0, 2147483647] 1454 | (void) sprintf(string, "%s%d", dimname, idim); | ^~~~~~ In file included from /usr/include/stdio.h:970, from /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:207: In function ‘sprintf’, inlined from ‘create_output_file.constprop’ at /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:1454:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 2 and 266 bytes into a destination of size 256 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 48%] Building C object progs/CMakeFiles/mincreshape.dir/mincreshape/copy_data.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincreshape.dir/mincreshape/copy_data.c.o -MF CMakeFiles/mincreshape.dir/mincreshape/copy_data.c.o.d -o CMakeFiles/mincreshape.dir/mincreshape/copy_data.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincreshape/copy_data.c [ 48%] Building C object progs/CMakeFiles/mincresample.dir/mincresample/resample_volumes.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincresample.dir/mincresample/resample_volumes.c.o -MF CMakeFiles/mincresample.dir/mincresample/resample_volumes.c.o.d -o CMakeFiles/mincresample.dir/mincresample/resample_volumes.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincresample/resample_volumes.c [ 49%] Linking C executable mincreshape cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincreshape.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincreshape.dir/link.d CMakeFiles/mincreshape.dir/mincreshape/mincreshape.c.o CMakeFiles/mincreshape.dir/mincreshape/copy_data.c.o -o mincreshape -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 49%] Built target mincreshape make -f progs/CMakeFiles/mincstats.dir/build.make progs/CMakeFiles/mincstats.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs 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progs/CMakeFiles/minctoraw.dir/minctoraw/minctoraw.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minctoraw.dir/minctoraw/minctoraw.c.o -MF CMakeFiles/minctoraw.dir/minctoraw/minctoraw.c.o.d -o 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-lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 55%] Built target mincstats make -f progs/CMakeFiles/mincwindow.dir/build.make progs/CMakeFiles/mincwindow.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/mincwindow.dir/DependInfo.cmake "--color=" [ 55%] Built target minctoraw make -f progs/CMakeFiles/mincmorph.dir/build.make progs/CMakeFiles/mincmorph.dir/depend make[3]: Entering directory 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincwindow.dir/link.d CMakeFiles/mincwindow.dir/mincwindow/mincwindow.c.o -o mincwindow -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 58%] Built target mincwindow make -f progs/CMakeFiles/mincsample.dir/build.make progs/CMakeFiles/mincsample.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg 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progs/CMakeFiles/mincsample.dir/mincsample/mt19937ar.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincsample.dir/mincsample/mt19937ar.c.o -MF CMakeFiles/mincsample.dir/mincsample/mt19937ar.c.o.d -o 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progs/CMakeFiles/rawtominc.dir/build.make progs/CMakeFiles/rawtominc.dir/build make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 62%] Building C object progs/CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o -MF CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o.d -o CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/rawtominc/rawtominc.c [ 63%] Linking C executable mincmorph cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincmorph.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincmorph.dir/link.d CMakeFiles/mincmorph.dir/mincmorph/mincmorph.c.o CMakeFiles/mincmorph.dir/mincmorph/kernel_io.c.o CMakeFiles/mincmorph.dir/mincmorph/kernel_ops.c.o -o mincmorph -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -lminc2 -lm -lz -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 63%] Built target mincmorph make -f progs/CMakeFiles/voxeltoworld.dir/build.make progs/CMakeFiles/voxeltoworld.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu 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-c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib/convert_origin_to_start.c [ 66%] Linking C executable rawtominc cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/rawtominc.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/voxeltoworld.dir/link.d CMakeFiles/voxeltoworld.dir/coordinates/voxeltoworld.c.o -o voxeltoworld -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -lminc2 -lm -lz -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 66%] Built target voxeltoworld make -f progs/CMakeFiles/worldtovoxel.dir/build.make progs/CMakeFiles/worldtovoxel.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/worldtovoxel.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/worldtovoxel.dir/build.make 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'/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/minccmp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/minccmp.dir/build.make progs/CMakeFiles/minccmp.dir/build make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 75%] Building C object progs/CMakeFiles/minccmp.dir/minccmp/minccmp.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccmp.dir/minccmp/minccmp.c.o -MF CMakeFiles/minccmp.dir/minccmp/minccmp.c.o.d -o CMakeFiles/minccmp.dir/minccmp/minccmp.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/progs/minccmp/minccmp.c [ 75%] Linking C executable mincblob cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincblob.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincblob.dir/link.d CMakeFiles/mincblob.dir/mincblob/mincblob.c.o -o mincblob -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -lminc2 -lm -lz -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 75%] Built target mincblob make -f conversion/CMakeFiles/acr_nema.dir/build.make conversion/CMakeFiles/acr_nema.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion/CMakeFiles/acr_nema.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f conversion/CMakeFiles/acr_nema.dir/build.make conversion/CMakeFiles/acr_nema.dir/build make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 75%] Building C object conversion/CMakeFiles/acr_nema.dir/Acr_nema/acr_io.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/acr_nema.dir/Acr_nema/acr_io.c.o -MF CMakeFiles/acr_nema.dir/Acr_nema/acr_io.c.o.d -o CMakeFiles/acr_nema.dir/Acr_nema/acr_io.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema/acr_io.c [ 76%] Linking C executable minccmp cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/minccmp.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/minccmp.dir/link.d CMakeFiles/minccmp.dir/minccmp/minccmp.c.o -o minccmp -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -lminc2 -lm -lz -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 76%] Built target minccmp make -f conversion/CMakeFiles/ecattominc.dir/build.make conversion/CMakeFiles/ecattominc.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion/CMakeFiles/ecattominc.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f conversion/CMakeFiles/ecattominc.dir/build.make conversion/CMakeFiles/ecattominc.dir/build make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 77%] Building C object conversion/CMakeFiles/ecattominc.dir/ecattominc/ecattominc.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/ecattominc.dir/ecattominc/ecattominc.c.o -MF CMakeFiles/ecattominc.dir/ecattominc/ecattominc.c.o.d -o CMakeFiles/ecattominc.dir/ecattominc/ecattominc.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/ecattominc/ecattominc.c [ 78%] Building C object conversion/CMakeFiles/acr_nema.dir/Acr_nema/dicom_client_routines.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/acr_nema.dir/Acr_nema/dicom_client_routines.c.o -MF CMakeFiles/acr_nema.dir/Acr_nema/dicom_client_routines.c.o.d -o CMakeFiles/acr_nema.dir/Acr_nema/dicom_client_routines.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema/dicom_client_routines.c [ 79%] Building C object conversion/CMakeFiles/acr_nema.dir/Acr_nema/dicom_network.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/acr_nema.dir/Acr_nema/dicom_network.c.o -MF CMakeFiles/acr_nema.dir/Acr_nema/dicom_network.c.o.d -o CMakeFiles/acr_nema.dir/Acr_nema/dicom_network.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema/dicom_network.c [ 80%] Building C object conversion/CMakeFiles/ecattominc.dir/ecattominc/insertblood.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/ecattominc.dir/ecattominc/insertblood.c.o -MF CMakeFiles/ecattominc.dir/ecattominc/insertblood.c.o.d -o CMakeFiles/ecattominc.dir/ecattominc/insertblood.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/ecattominc/insertblood.c [ 81%] Building C object conversion/CMakeFiles/ecattominc.dir/ecattominc/ecat_file.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/ecattominc.dir/ecattominc/ecat_file.c.o -MF CMakeFiles/ecattominc.dir/ecattominc/ecat_file.c.o.d -o CMakeFiles/ecattominc.dir/ecattominc/ecat_file.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/ecattominc/ecat_file.c [ 81%] Building C object conversion/CMakeFiles/ecattominc.dir/ecattominc/machine_indep.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/ecattominc.dir/ecattominc/machine_indep.c.o -MF CMakeFiles/ecattominc.dir/ecattominc/machine_indep.c.o.d -o CMakeFiles/ecattominc.dir/ecattominc/machine_indep.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/ecattominc/machine_indep.c [ 82%] Building C object conversion/CMakeFiles/acr_nema.dir/Acr_nema/element.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/acr_nema.dir/Acr_nema/element.c.o -MF CMakeFiles/acr_nema.dir/Acr_nema/element.c.o.d -o CMakeFiles/acr_nema.dir/Acr_nema/element.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema/element.c [ 83%] Linking C executable ecattominc cd 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'/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target ecattominc make -f conversion/CMakeFiles/minctoecat.dir/build.make conversion/CMakeFiles/minctoecat.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion/CMakeFiles/minctoecat.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f conversion/CMakeFiles/minctoecat.dir/build.make 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/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion/CMakeFiles/nii2mnc.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f conversion/CMakeFiles/nii2mnc.dir/build.make conversion/CMakeFiles/nii2mnc.dir/build make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 92%] Building C object conversion/CMakeFiles/nii2mnc.dir/nifti1/nii2mnc.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/nii2mnc.dir/nifti1/nii2mnc.c.o -MF CMakeFiles/nii2mnc.dir/nifti1/nii2mnc.c.o.d -o CMakeFiles/nii2mnc.dir/nifti1/nii2mnc.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/nifti1/nii2mnc.c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/nifti1/nii2mnc.c: In function ‘main’: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/nifti1/nii2mnc.c:204:13: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 204 | fread(&ana_hdr, sizeof (ana_hdr), 1, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mnc2nii.dir/link.d CMakeFiles/mnc2nii.dir/nifti1/mnc2nii.c.o -o mnc2nii -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lniftiio -lm -lminc2 -lm -lz -ldl -lnetcdf -lniftiio make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target mnc2nii make -f conversion/CMakeFiles/upet2mnc.dir/build.make conversion/CMakeFiles/upet2mnc.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion/CMakeFiles/upet2mnc.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f conversion/CMakeFiles/upet2mnc.dir/build.make conversion/CMakeFiles/upet2mnc.dir/build make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 93%] Building C object conversion/CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o -MF CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o.d -o CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c:419:36: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 419 | {NULL, ARGV_VERINFO, (char *) VERSIONSTR, (char *) NULL, NULL}, | ^~~~~~~~~~ /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c:16:38: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 16 | #define VERSIONSTR VERSION " built " __DATE__ " " __TIME__ | ^~~~~~~~ /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c:419:36: note: in expansion of macro ‘VERSIONSTR’ 419 | {NULL, ARGV_VERINFO, (char *) VERSIONSTR, (char *) NULL, NULL}, | ^~~~~~~~~~ /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c: In function ‘upet_to_minc’: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c:537:19: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 537 | argv_tmp[1] = VERSIONSTR; | ^~~~~~~~~~ /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c:16:38: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 16 | #define VERSIONSTR VERSION " built " __DATE__ " " __TIME__ | ^~~~~~~~ /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c:537:19: note: in expansion of macro ‘VERSIONSTR’ 537 | argv_tmp[1] = VERSIONSTR; | ^~~~~~~~~~ [ 94%] Linking C executable nii2mnc cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cmake -E cmake_link_script CMakeFiles/nii2mnc.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/nii2mnc.dir/link.d CMakeFiles/nii2mnc.dir/nifti1/nii2mnc.c.o -o nii2mnc -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lniftiio -lm -lminc2 -lm -lz -ldl -lnetcdf -lniftiio make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 94%] Built target nii2mnc make -f conversion/CMakeFiles/dcm2mnc.dir/build.make conversion/CMakeFiles/dcm2mnc.dir/depend make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion/CMakeFiles/dcm2mnc.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f conversion/CMakeFiles/dcm2mnc.dir/build.make conversion/CMakeFiles/dcm2mnc.dir/build make[3]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 95%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dcm2mnc.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dcm2mnc.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/dcm2mnc.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/dcm2mnc.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c [ 95%] Linking C executable upet2mnc cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cmake -E cmake_link_script CMakeFiles/upet2mnc.dir/link.txt --verbose=1 /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:179:26: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 179 | {NULL, ARGV_VERINFO, VERSION_STRING, NULL, NULL }, | ^~~~~~~~~~~~~~ /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:168:41: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 168 | #define VERSION_STRING "2.01.02 built " __DATE__ " " __TIME__ | ^~~~~~~~ /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:179:26: note: in expansion of macro ‘VERSION_STRING’ 179 | {NULL, ARGV_VERINFO, VERSION_STRING, NULL, NULL }, | ^~~~~~~~~~~~~~ /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c: In function ‘is_cdexport_file’: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:1019:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1019 | fread(tst_str, 1, DICM_MAGIC_SIZE, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c: In function ‘is_ima_file’: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:1042:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1042 | fread(mfg_str, 1, IMA_MAGIC_SIZE, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c: In function ‘use_the_files’: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:980:17: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 980 | fscanf(fp, "%s", pipe_output_name); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/upet2mnc.dir/link.d CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o -o upet2mnc -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target upet2mnc [ 96%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_to_minc.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_to_minc.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_to_minc.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_to_minc.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dicom_to_minc.c [ 97%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/siemens_to_dicom.c [ 97%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dicom_read.c [ 98%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/minc_file.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/minc_file.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/minc_file.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/minc_file.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/minc_file.c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/minc_file.c: In function ‘setup_minc_variables’: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/minc_file.c:1084:17: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1084 | fread(data, 1, length, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 99%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/progress.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/progress.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/progress.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/progress.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/progress.c [100%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/string_to_filename.c.o cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/string_to_filename.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/string_to_filename.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/string_to_filename.c.o -c /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/string_to_filename.c [100%] Linking C executable dcm2mnc cd /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cmake -E cmake_link_script CMakeFiles/dcm2mnc.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/dcm2mnc.dir/link.d CMakeFiles/dcm2mnc.dir/dcm2mnc/dcm2mnc.c.o CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_to_minc.c.o CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o CMakeFiles/dcm2mnc.dir/dcm2mnc/minc_file.c.o CMakeFiles/dcm2mnc.dir/dcm2mnc/progress.c.o CMakeFiles/dcm2mnc.dir/dcm2mnc/string_to_filename.c.o -o dcm2mnc -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf libacr_nema.a -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [100%] Built target dcm2mnc make[2]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' dh_auto_test cd obj-x86_64-linux-gnu && make -j2 test ARGS\+=--verbose ARGS\+=-j2 make[1]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process --verbose -j2 UpdateCTestConfiguration from :/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/DartConfiguration.tcl Parse Config file:/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/DartConfiguration.tcl Parse Config file:/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/DartConfiguration.tcl Test project /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end Connected to MAKE jobserver test 1 Start 1: mincinfo-test 1: Test command: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/Testing/mincinfo-test.pl 1: Working Directory: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/Testing 1: Environment variables: 1: MINCINFO_BIN=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincinfo 1: Test timeout computed to be: 1500 test 2 Start 2: mincstats-test 2: Test command: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/Testing/mincstats-test.pl 2: Working Directory: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/Testing 2: Environment variables: 2: MINCSTATS_BIN=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincstats 2: Test timeout computed to be: 1500 1: Case 1 - Test the essential command line options. 2: Case 1 - Basic output. 2: Case 2 - Test the sum and sum2 options. 1: Case 2 - test operation with no command-line options. 2: Case 3 - Test the mean option. 1: Case 3 - test the dimnames option. 2: Case 4 - Test the stddev and variance options. 1: Case 4 - test the varnames option. 2: Case 5 - Test the min and max options. 1: Case 5 - test the dimlength option. 2: Case 6 - Test the CoM option. 1: Case 6 - test the vartype option. 1: Case 7 - test the vardims option. 2: Case 7 - Test the median and entropy options. 1: Case 8 - test the varatts option. 2: Case 8 - Test the histogram option. 2: Case 9 - Test the integer histogram option. 1: Case 9 - test the varatts option. 2: OK. 1/6 Test #2: mincstats-test ................... Passed 0.27 sec test 3 Start 3: mincaverage-test 3: Test command: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/Testing/mincaverage-test.sh 3: Working Directory: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/Testing 3: Environment variables: 3: MINCAVERAGE_BIN=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincaverage 3: MINCSTATS_BIN=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincstats 3: Test timeout computed to be: 1500 1: Case 10 - test the atttype option. 3: Processing:...Done 1: Case 11 - test the attvalue option. 1: Case 12 - test the minc_version option. 3: Normalizing:..Done 3: Processing:...Done 1: Case 13 - test the error_string option. 1: OK. 2/6 Test #1: mincinfo-test .................... Passed 0.41 sec test 4 Start 4: minccalc-test 4: Test command: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/Testing/minccalc-test.sh 4: Working Directory: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/Testing 4: Environment variables: 4: MINCCALC_BIN=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/minccalc 4: MINCSTATS_BIN=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincstats 4: Test timeout computed to be: 1500 3: OK. 3/6 Test #3: mincaverage-test ................. Passed 0.14 sec test 5 Start 5: mincresample-test 5: Test command: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/Testing/mincresample-test.sh 5: Working Directory: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/Testing 5: Environment variables: 5: MINCRESAMPLE_BIN=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincresample 5: MINCSTATS_BIN=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincstats 5: Test timeout computed to be: 1500 5: Transforming slices:.....Done 4: Case 1...OK 5: Transforming slices:.....Done 5: OK. 4/6 Test #5: mincresample-test ................ Passed 0.12 sec test 6 Start 6: mincreshape-test 6: Test command: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/Testing/mincreshape-test.pl 6: Working Directory: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/Testing 6: Environment variables: 6: MINCRESHAPE_BIN=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincreshape 6: MINCSTATS_BIN=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincstats 6: MINCINFO_BIN=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincinfo 6: MINCEXTRACT_BIN=/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincextract 6: Test timeout computed to be: 1500 4: Case 2...OK 4: Case 3...OK 4: Case 4...OK 4: Case 5...OK...OK 4: Case 6...OK...OK...OK 4: Case 7...OK 4: Case 8...OK 6: OK. 5/6 Test #6: mincreshape-test ................. Passed 0.47 sec 4: Case 9...OK 4: No errors detected. 6/6 Test #4: minccalc-test .................... Passed 0.63 sec 100% tests passed, 0 tests failed out of 6 Total Test time (real) = 1.04 sec make[1]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/minc-tools/ cd obj-x86_64-linux-gnu && make -j2 install DESTDIR=/build/minc-tools-bN2Zlc/minc-tools-2.3.00\+dfsg/debian/minc-tools AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg -B/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minccalc -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minccalc" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincgen -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincgen" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/invert_raw_image -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/invert_raw_image" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincaverage -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincaverage" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincconcat -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincconcat" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincconvert -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincconvert" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minccopy -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minccopy" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincdump -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincdump" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincblob -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincblob" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minccmp -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minccmp" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincexpand -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincexpand" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincextract -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincextract" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincinfo -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincinfo" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minclookup -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minclookup" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmakescalar -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmakescalar" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmakevector -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmakevector" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmath -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmath" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minc_modify_header -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minc_modify_header" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincresample -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincresample" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincreshape -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincreshape" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincstats -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincstats" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minctoraw -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minctoraw" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincwindow -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincwindow" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmorph -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmorph" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincsample -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincsample" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/rawtominc -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/rawtominc" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/voxeltoworld -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/voxeltoworld" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/worldtovoxel -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/worldtovoxel" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/transformtags -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/transformtags" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/xfmconcat -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/xfmconcat" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/xfminvert -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/xfminvert" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincdiff -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincedit -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincheader -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincview -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minchistory -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincpik -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/voxeltoworld.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincaverage.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincblob.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minccalc.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minccmp.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincconcat.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincconvert.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minccopy.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincdiff.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincdump.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincedit.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincexpand.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincextract.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincgen.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincheader.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincinfo.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minclookup.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincmakescalar.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincmakevector.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincmath.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minc_modify_header.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincresample.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincreshape.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincsample.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincstats.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minctoraw.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/invert_raw_image.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincview.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincwindow.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/rawtominc.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/transformtags.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/xfm2def.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/xfmconcat.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/xfmflip.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/xfminvert.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/dcm2mnc -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/dcm2mnc" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/ecattominc -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/ecattominc" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minctoecat -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minctoecat" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mnc2nii -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mnc2nii" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/nii2mnc -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/nii2mnc" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/upet2mnc -- Set non-toolchain portion of runtime path of "/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/upet2mnc" to "" -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/dcm2mnc.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/ecattominc.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/upet2mnc.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minctoecat.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mnc2nii.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/nii2mnc.1 -- Installing: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/vff2mnc.1 make[1]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' debian/rules override_dh_install make[1]: Entering directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg' cd debian/minc-tools && mkdir -p usr/share && mv usr/man usr/share dh_link /usr/share/man/man1/voxeltoworld.1 \ /usr/share/man/man1/worldtovoxel.1 for pl in `grep -Rl '#![[:space:]]*/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \ sed -i '1s?^#![[:space:]]*/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' ${pl} ; \ done make[1]: Leaving directory '/build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg' dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dpkg-gencontrol: warning: package minc-tools: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package minc-tools: substitution variable ${perl:Depends} unused, but is defined dh_md5sums dh_builddeb dpkg-deb: building package 'minc-tools' in '../minc-tools_2.3.00+dfsg-12_amd64.deb'. dpkg-deb: building package 'minc-tools-dbgsym' in '../minc-tools-dbgsym_2.3.00+dfsg-12_amd64.deb'. dpkg-genbuildinfo -O../minc-tools_2.3.00+dfsg-12_amd64.buildinfo dpkg-genchanges -O../minc-tools_2.3.00+dfsg-12_amd64.changes dpkg-genchanges: info: not including original source code in upload dpkg-source -Zxz --after-build . dpkg-buildpackage: info: binary and diff upload (original source NOT included) -------------------------------------------------------------------------------- Build finished at 2025-07-01T08:46:30Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Tue, 01 Jul 2025 08:46:30 +0000 | +------------------------------------------------------------------------------+ minc-tools_2.3.00+dfsg-12_amd64.changes: ---------------------------------------- Format: 1.8 Date: Sat, 15 Feb 2025 21:47:38 -0600 Source: minc-tools Binary: minc-tools minc-tools-dbgsym Architecture: source amd64 Version: 2.3.00+dfsg-12 Distribution: perl-5.40-throwaway Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Steve M. Robbins Description: minc-tools - MNI medical image format tools Closes: 1095471 Changes: minc-tools (2.3.00+dfsg-12) unstable; urgency=medium . [ Steve Robbins ] * [71683d0] Apply patch from Sebastiaan Couwenberg to fix build with NetCDF 4.9.3. Closes: #1095471. 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minc-tools_2.3.00+dfsg-12_amd64.deb Files: 6beb62dafceadb3429dc2bcad06bf2f4 1300 science optional minc-tools_2.3.00+dfsg-12.dsc b93f3030de1ca9901d4e2cec32f63ac1 16576 science optional minc-tools_2.3.00+dfsg-12.debian.tar.xz 11c4883570d2888fc84a32a35d865b14 710356 debug optional minc-tools-dbgsym_2.3.00+dfsg-12_amd64.deb d750d0d0815548b3378d0f099bb57d85 10042 science optional minc-tools_2.3.00+dfsg-12_amd64.buildinfo 7861bc640c1b489f4d9e7df96ef48a41 401500 science optional minc-tools_2.3.00+dfsg-12_amd64.deb +------------------------------------------------------------------------------+ | Buildinfo Tue, 01 Jul 2025 08:46:30 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: minc-tools Binary: minc-tools minc-tools-dbgsym Architecture: amd64 source Version: 2.3.00+dfsg-12 Checksums-Md5: 6beb62dafceadb3429dc2bcad06bf2f4 1300 minc-tools_2.3.00+dfsg-12.dsc 11c4883570d2888fc84a32a35d865b14 710356 minc-tools-dbgsym_2.3.00+dfsg-12_amd64.deb 7861bc640c1b489f4d9e7df96ef48a41 401500 minc-tools_2.3.00+dfsg-12_amd64.deb Checksums-Sha1: daab374ae97f0a9b3827a2ac6b1ccc29145625a3 1300 minc-tools_2.3.00+dfsg-12.dsc 9ebc308d93a17d46d8a0878e916ab3736e44bdd5 710356 minc-tools-dbgsym_2.3.00+dfsg-12_amd64.deb c930f900bf5476cf228504a895ded6dee6e262f8 401500 minc-tools_2.3.00+dfsg-12_amd64.deb Checksums-Sha256: 63f8ff461303b19c950b9fbc2bd06f0a35c327c411c59cfc6d5d2c78462ff918 1300 minc-tools_2.3.00+dfsg-12.dsc 67faf7705043c0e1b5cd415dffdd18cbb6d99e866831468c668746bfe6f14b9a 710356 minc-tools-dbgsym_2.3.00+dfsg-12_amd64.deb 500c2a78b00e3f61fe70d9be97d27784854fac3476eeef8a17f8298935801efc 401500 minc-tools_2.3.00+dfsg-12_amd64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Tue, 01 Jul 2025 08:46:29 +0000 Build-Path: /build/minc-tools-bN2Zlc/minc-tools-2.3.00+dfsg Build-Tainted-By: usr-local-has-programs Installed-Build-Depends: autoconf (= 2.72-3.1), automake (= 1:1.17-4), autopoint (= 0.23.1-2), autotools-dev (= 20240727.1), base-files (= 13.8), base-passwd (= 3.6.7), bash (= 5.2.37-2+b3), binutils (= 2.44-3), binutils-common (= 2.44-3), binutils-x86-64-linux-gnu (= 2.44-3), bison (= 2:3.8.2+dfsg-1+b2), bsdextrautils (= 2.41-5), bsdutils (= 1:2.41-5), build-essential (= 12.12), bzip2 (= 1.0.8-6), cmake (= 3.31.6-2), cmake-data (= 3.31.6-2), comerr-dev (= 2.1-1.47.2-3+b1), coreutils (= 9.7-3), cpp (= 4:14.2.0-1), cpp-13 (= 13.4.0-1), cpp-13-x86-64-linux-gnu (= 13.4.0-1), cpp-14 (= 14.2.0-19), cpp-14-x86-64-linux-gnu (= 14.2.0-19), cpp-x86-64-linux-gnu (= 4:14.2.0-1), dash (= 0.5.12-12), debconf (= 1.5.91), debhelper (= 13.24.2), debianutils (= 5.23.1), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.1-2), diffutils (= 1:3.10-4), dpkg (= 1.22.20), dpkg-dev (= 1.22.20), dwz (= 0.15-1+b1), file (= 1:5.46-5), findutils (= 4.10.0-3), flex (= 2.6.4-8.2+b4), fontconfig-config (= 2.15.0-2.3), fonts-dejavu-core (= 2.37-8), fonts-dejavu-mono (= 2.37-8), fonts-lmodern (= 2.005-1), g++ (= 4:14.2.0-1), g++-14 (= 14.2.0-19), g++-14-x86-64-linux-gnu (= 14.2.0-19), g++-x86-64-linux-gnu (= 4:14.2.0-1), gcc (= 4:14.2.0-1), gcc-13 (= 13.4.0-1), gcc-13-base (= 13.4.0-1), gcc-13-x86-64-linux-gnu (= 13.4.0-1), gcc-14 (= 14.2.0-19), gcc-14-base (= 14.2.0-19), gcc-14-x86-64-linux-gnu (= 14.2.0-19), gcc-x86-64-linux-gnu (= 4:14.2.0-1), gettext (= 0.23.1-2), gettext-base (= 0.23.1-2), grep (= 3.11-4), groff-base (= 1.23.0-9), gzip (= 1.13-1), hdf5-helpers (= 1.14.5+repack-3), hostname (= 3.25), init-system-helpers (= 1.68), intltool-debian (= 0.35.0+20060710.6), krb5-multidev (= 1.21.3-5), libacl1 (= 2.3.2-2+b1), libaec-dev (= 1.1.3-1+b1), libaec0 (= 1.1.3-1+b1), libarchive-zip-perl (= 1.68-1), libarchive13t64 (= 3.7.4-3), libasan8 (= 14.2.0-19), libatomic1 (= 14.2.0-19), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.0.5-1), libaudit1 (= 1:4.0.5-1), libbinutils (= 2.44-3), libblkid1 (= 2.41-5), libbrotli-dev (= 1.1.0-2+b7), libbrotli1 (= 1.1.0-2+b7), libbz2-1.0 (= 1.0.8-6), libc-bin (= 2.41-9), libc-dev-bin (= 2.41-9), libc6 (= 2.41-9), libc6-dev (= 2.41-9), libcairo2 (= 1.18.4-1+b1), libcap-ng0 (= 0.8.5-4+b1), libcap2 (= 1:2.75-9), libcc1-0 (= 14.2.0-19), libcom-err2 (= 1.47.2-3+b1), libcrypt-dev (= 1:4.4.38-1), libcrypt1 (= 1:4.4.38-1), libctf-nobfd0 (= 2.44-3), libctf0 (= 2.44-3), libcurl3t64-gnutls (= 8.14.1-2), libcurl4-gnutls-dev (= 8.14.1-2), libcurl4t64 (= 8.14.1-2), libdb5.3t64 (= 5.3.28+dfsg2-9), libdebconfclient0 (= 0.279), libdebhelper-perl (= 13.24.2), libdpkg-perl (= 1.22.20), libelf1t64 (= 0.192-4), libevent-2.1-7t64 (= 2.1.12-stable-10+b1), libexpat1 (= 2.7.1-1), libffi8 (= 3.4.8-2), libfile-stripnondeterminism-perl (= 1.14.1-2), libfontconfig1 (= 2.15.0-2.3), libfreetype6 (= 2.13.3+dfsg-1), libgcc-13-dev (= 13.4.0-1), libgcc-14-dev (= 14.2.0-19), libgcc-s1 (= 14.2.0-19), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgfortran5 (= 14.2.0-19), libglib2.0-0t64 (= 2.84.3-1), libgmp-dev (= 2:6.3.0+dfsg-3), libgmp10 (= 2:6.3.0+dfsg-3), libgmpxx4ldbl (= 2:6.3.0+dfsg-3), libgnutls-dane0t64 (= 3.8.9-2), libgnutls-openssl27t64 (= 3.8.9-2), libgnutls28-dev (= 3.8.9-2), libgnutls30t64 (= 3.8.9-2), libgomp1 (= 14.2.0-19), libgprofng0 (= 2.44-3), libgraphite2-3 (= 1.3.14-2+b1), libgssapi-krb5-2 (= 1.21.3-5), libgssrpc4t64 (= 1.21.3-5), libharfbuzz0b (= 10.2.0-1+b1), libhdf5-310 (= 1.14.5+repack-3), libhdf5-cpp-310 (= 1.14.5+repack-3), libhdf5-dev (= 1.14.5+repack-3), libhdf5-fortran-310 (= 1.14.5+repack-3), libhdf5-hl-310 (= 1.14.5+repack-3), libhdf5-hl-cpp-310 (= 1.14.5+repack-3), libhdf5-hl-fortran-310 (= 1.14.5+repack-3), libhogweed6t64 (= 3.10.1-1), libhwasan0 (= 14.2.0-19), libice6 (= 2:1.1.1-1), libicu76 (= 76.1-4), libidn2-0 (= 2.3.8-2), libidn2-dev (= 2.3.8-2), libisl23 (= 0.27-1), libitm1 (= 14.2.0-19), libjansson4 (= 2.14-2+b3), libjpeg-dev (= 1:2.1.5-4), libjpeg62-turbo (= 1:2.1.5-4), libjpeg62-turbo-dev (= 1:2.1.5-4), libjsoncpp26 (= 1.9.6-3), libk5crypto3 (= 1.21.3-5), libkadm5clnt-mit12 (= 1.21.3-5), libkadm5srv-mit12 (= 1.21.3-5), libkdb5-10t64 (= 1.21.3-5), libkeyutils1 (= 1.6.3-6), libkpathsea6 (= 2024.20240313.70630+ds-6), libkrb5-3 (= 1.21.3-5), libkrb5-dev (= 1.21.3-5), libkrb5support0 (= 1.21.3-5), liblastlog2-2 (= 2.41-5), libldap-dev (= 2.6.10+dfsg-1+b1), libldap2 (= 2.6.10+dfsg-1+b1), liblsan0 (= 14.2.0-19), liblz4-1 (= 1.10.0-4), liblzma5 (= 5.8.1-1), libmagic-mgc (= 1:5.46-5), libmagic1t64 (= 1:5.46-5), libmd0 (= 1.1.0-2+b1), libminc-dev (= 2.4.06-2.1+b4), libminc2-5.3.0t64 (= 2.4.06-2.1+b4), libmount1 (= 2.41-5), libmpc3 (= 1.3.1-1+b3), libmpfi0 (= 1.5.4+ds-4), libmpfr6 (= 4.2.2-1), libncursesw6 (= 6.5+20250216-2), libnetcdf-dev (= 1:4.9.3-1), libnetcdf22 (= 1:4.9.3-1), libnettle8t64 (= 3.10.1-1), libnghttp2-14 (= 1.64.0-1.1), libnghttp2-dev (= 1.64.0-1.1), libnghttp3-9 (= 1.8.0-1), libnghttp3-dev (= 1.8.0-1), libngtcp2-16 (= 1.11.0-1), libngtcp2-crypto-gnutls-dev (= 1.11.0-1), libngtcp2-crypto-gnutls8 (= 1.11.0-1), libngtcp2-dev (= 1.11.0-1), libnifti2-2 (= 3.0.1-9.1+b1), libnifti2-dev (= 3.0.1-9.1+b1), libnifticdf-dev (= 3.0.1-9.1+b1), libnifticdf2 (= 3.0.1-9.1+b1), libniftiio-dev (= 3.0.1-9.1+b1), libniftiio2t64 (= 3.0.1-9.1+b1), libp11-kit-dev (= 0.25.5-3), libp11-kit0 (= 0.25.5-3), libpam-modules (= 1.7.0-5), libpam-modules-bin (= 1.7.0-5), libpam-runtime (= 1.7.0-5), libpam0g (= 1.7.0-5), libpaper-utils (= 2.2.5-0.3+b2), libpaper2 (= 2.2.5-0.3+b2), libpcre2-8-0 (= 10.45-1), libperl5.40 (= 5.40.1-4), libpipeline1 (= 1.5.8-1), libpixman-1-0 (= 0.44.0-3), libpkgconf3 (= 1.8.1-4), libpng16-16t64 (= 1.6.48-1), libpotrace0 (= 1.16-2+b2), libproc2-0 (= 2:4.0.4-8), libpsl-dev (= 0.21.2-1.1+b1), libpsl5t64 (= 0.21.2-1.1+b1), libptexenc1 (= 2024.20240313.70630+ds-6), libquadmath0 (= 14.2.0-19), librhash1 (= 1.4.6-1), librtmp-dev (= 2.4+20151223.gitfa8646d.1-2+b5), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b5), libsasl2-2 (= 2.1.28+dfsg1-9), libsasl2-modules-db (= 2.1.28+dfsg1-9), libseccomp2 (= 2.6.0-2), libselinux1 (= 3.8.1-1), libsframe1 (= 2.44-3), libsm6 (= 2:1.2.6-1), libsmartcols1 (= 2.41-5), libsqlite3-0 (= 3.46.1-6), libssh2-1-dev (= 1.11.1-1), libssh2-1t64 (= 1.11.1-1), libssl-dev (= 3.5.0-2), libssl3t64 (= 3.5.0-2), libstdc++-14-dev (= 14.2.0-19), libstdc++6 (= 14.2.0-19), libsynctex2 (= 2024.20240313.70630+ds-6), libsystemd0 (= 257.7-1), libsz2 (= 1.1.3-1+b1), libtasn1-6 (= 4.20.0-2), libtasn1-6-dev (= 4.20.0-2), libteckit0 (= 2.5.12+ds1-1+b1), libtexlua53-5 (= 2024.20240313.70630+ds-6), libtext-charwidth-perl (= 0.04-11+b5), libtext-wrapi18n-perl (= 0.06-10), libtinfo6 (= 6.5+20250216-2), libtool (= 2.5.4-4), libtsan2 (= 14.2.0-19), libubsan1 (= 14.2.0-19), libuchardet0 (= 0.0.8-1+b2), libudev1 (= 257.7-1), libunbound8 (= 1.22.0-1+b1), libunistring5 (= 1.3-2), libuuid1 (= 2.41-5), libuv1t64 (= 1.50.0-2), libx11-6 (= 2:1.8.12-1), libx11-data (= 2:1.8.12-1), libxau6 (= 1:1.0.11-1), libxaw7 (= 2:1.0.16-1), libxcb-render0 (= 1.17.0-2+b1), libxcb-shm0 (= 1.17.0-2+b1), libxcb1 (= 1.17.0-2+b1), libxdmcp6 (= 1:1.1.5-1), libxext6 (= 2:1.3.4-1+b3), libxi6 (= 2:1.8.2-1), libxml2 (= 2.12.7+dfsg+really2.9.14-1), libxml2-dev (= 2.12.7+dfsg+really2.9.14-1), libxmu6 (= 2:1.1.3-3+b4), libxpm4 (= 1:3.5.17-1+b3), libxrender1 (= 1:0.9.12-1), libxt6t64 (= 1:1.2.1-1.2+b2), libxxhash0 (= 0.8.3-2), libznz-dev (= 3.0.1-9.1+b1), libznz3 (= 3.0.1-9.1+b1), libzstd-dev (= 1.5.7+dfsg-1), libzstd1 (= 1.5.7+dfsg-1), libzzip-0-13t64 (= 0.13.78+dfsg.1-0.1), linux-libc-dev (= 6.12.33-1), m4 (= 1.4.19-8), make (= 4.4.1-2), man-db (= 2.13.1-1), mawk (= 1.3.4.20250131-1), ncurses-base (= 6.5+20250216-2), ncurses-bin (= 6.5+20250216-2), nettle-dev (= 3.10.1-1), openssl-provider-legacy (= 3.5.0-2), patch (= 2.8-2), perl (= 5.40.1-4), perl-base (= 5.40.1-4), perl-modules-5.40 (= 5.40.1-4), pkgconf (= 1.8.1-4), pkgconf-bin (= 1.8.1-4), po-debconf (= 1.0.21+nmu1), procps (= 2:4.0.4-8), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.25), sysvinit-utils (= 3.14-4), t1utils (= 1.41-4), tar (= 1.35+dfsg-3.1), tex-common (= 6.19), texlive-base (= 2024.20250309-1), texlive-binaries (= 2024.20240313.70630+ds-6), texlive-latex-base (= 2024.20250309-1), ucf (= 3.0052), util-linux (= 2.41-5), x11-common (= 1:7.7+24), xdg-utils (= 1.2.1-2), xz-utils (= 5.8.1-1), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="parallel=2" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" LD_LIBRARY_PATH="/usr/lib/libeatmydata" SOURCE_DATE_EPOCH="1739677658" +------------------------------------------------------------------------------+ | Package contents Tue, 01 Jul 2025 08:46:30 +0000 | +------------------------------------------------------------------------------+ minc-tools-dbgsym_2.3.00+dfsg-12_amd64.deb ------------------------------------------ new Debian package, version 2.0. size 710356 bytes: control archive=2268 bytes. 1873 bytes, 12 lines control 4009 bytes, 38 lines md5sums Package: minc-tools-dbgsym Source: minc-tools Version: 2.3.00+dfsg-12 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Packaging Team Installed-Size: 1545 Depends: libc6 (>= 2.34), libminc2-5.3.0t64 (>= 2.4.06), libnetcdf22 (>= 3.6.1), libniftiio2t64 (>= 3.0.1), netcdf-bin, libgetopt-tabular-perl, libtext-format-perl, imagemagick, sensible-utils Section: science Priority: optional Homepage: https://www.bic.mni.mcgill.ca/ServicesSoftware/HomePage Description: MNI medical image format tools This package contains tools to manipulate MINC files. . The Minc file format is a highly flexible medical image file format built on top of the NetCDF generalized data format. The format is simple, self-describing, extensible, portable and N-dimensional, with programming interfaces for both low-level data access and high-level volume manipulation. On top of the libraries is a suite of generic image-file manipulation tools. 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./usr/share/man/man1/xfminvert.1.gz +------------------------------------------------------------------------------+ | Post Build Tue, 01 Jul 2025 08:46:31 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Tue, 01 Jul 2025 08:46:31 +0000 | +------------------------------------------------------------------------------+ Purging /build/minc-tools-bN2Zlc Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Tue, 01 Jul 2025 08:46:31 +0000 | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: full Build-Space: 28248 Build-Time: 47 Distribution: perl-5.40-throwaway Host Architecture: amd64 Install-Time: 64 Job: /srv/debomatic/incoming/minc-tools_2.3.00+dfsg-12.dsc Machine Architecture: amd64 Package: minc-tools Package-Time: 123 Source-Version: 2.3.00+dfsg-12 Space: 28248 Status: successful Version: 2.3.00+dfsg-12 -------------------------------------------------------------------------------- Finished at 2025-07-01T08:46:30Z Build needed 00:02:03, 28248k disk space